mRNA_H-elongata_contig93680.16801.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig93680.16801.1 vs. uniprot
Match: A0A2S1PRW8_FUCSE (Putative argonaute n=1 Tax=Fucus serratus TaxID=87148 RepID=A0A2S1PRW8_FUCSE) HSP 1 Score: 234 bits (597), Expect = 1.690e-69 Identity = 119/143 (83.22%), Postives = 127/143 (88.81%), Query Frame = 1
Query: 1 AQCVLVKHVLTAKIQYMANLCLKINAKLGGRNAIPAKKLPFVQDAPTIVFGADVNHPGAGNVSTPSIAAVVASMDRWVARHGSCVAVQEHRKE----------SLLISFYRVNNSKPSRIIFFRDGVSEGQFREVLRYEVSVL 399
+QCVL+KHV TAKIQY+ANLCLKINAKLGGRNA+P KLPFVQDAPTIVFGADVNHPGAGNVS PSIAAVVASMDRWV+RHGSCVAVQEHRKE +LLISFYRVNNSKPSRIIFFRDGVSEGQFREVLR+EV +
Sbjct: 660 SQCVLLKHVQTAKIQYLANLCLKINAKLGGRNAVPKDKLPFVQDAPTIVFGADVNHPGAGNVSKPSIAAVVASMDRWVSRHGSCVAVQEHRKEVIQDLAAMVKNLLISFYRVNNSKPSRIIFFRDGVSEGQFREVLRFEVRAI 802
BLAST of mRNA_H-elongata_contig93680.16801.1 vs. uniprot
Match: D7FQK3_ECTSI (Argonaute 1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQK3_ECTSI) HSP 1 Score: 233 bits (594), Expect = 4.150e-69 Identity = 118/143 (82.52%), Postives = 127/143 (88.81%), Query Frame = 1
Query: 1 AQCVLVKHVLTAKIQYMANLCLKINAKLGGRNAIPAKKLPFVQDAPTIVFGADVNHPGAGNVSTPSIAAVVASMDRWVARHGSCVAVQEHRKE----------SLLISFYRVNNSKPSRIIFFRDGVSEGQFREVLRYEVSVL 399
+QCVL+KHV TAKIQY+ANLCLKINAKLGGRNA+P KLPFVQDAPTIVFGADVNHPGAGNVS PSIAAVVASMDRWV+RHGSCVAVQEHRKE +LLISFYRVNN+KP+RIIFFRDGVSEGQFREVLRYEV +
Sbjct: 651 SQCVLLKHVHTAKIQYLANLCLKINAKLGGRNAVPRDKLPFVQDAPTIVFGADVNHPGAGNVSKPSIAAVVASMDRWVSRHGSCVAVQEHRKEVIQDLASMVKNLLISFYRVNNAKPARIIFFRDGVSEGQFREVLRYEVRAI 793
BLAST of mRNA_H-elongata_contig93680.16801.1 vs. uniprot
Match: A0A1Y1YHC8_9FUNG (Piwi-domain-containing protein n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1YHC8_9FUNG) HSP 1 Score: 148 bits (373), Expect = 9.250e-39 Identity = 78/143 (54.55%), Postives = 99/143 (69.23%), Query Frame = 1
Query: 4 QCVLVKHVLTAKIQYMANLCLKINAKLGGRNA-IPAKKLPFVQDAPTIVFGADVNHPGAGNVSTPSIAAVVASMDRWVARHGSCVAVQEHRKE----------SLLISFYRVNNSKPSRIIFFRDGVSEGQFREVLRYEVSVL 399
QCV KHV A QY AN+CLKINAKLGG N+ +P +++PF+ +APTIVFGADV HPG G + PSIAAVVASMD V+R+ SC+ Q R E LL++FY+ KP++I+F+RDGVSEGQF +VL EV +
Sbjct: 543 QCVQGKHVFKANKQYCANVCLKINAKLGGMNSYLPPEQIPFISNAPTIVFGADVTHPGPGENNKPSIAAVVASMDNKVSRYASCIRAQASRTEIIADLAAMVQELLVAFYKSCRQKPAQILFYRDGVSEGQFGQVLHAEVKAV 685
BLAST of mRNA_H-elongata_contig93680.16801.1 vs. uniprot
Match: A0A024FT57_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024FT57_9STRA) HSP 1 Score: 148 bits (373), Expect = 9.740e-39 Identity = 76/143 (53.15%), Postives = 99/143 (69.23%), Query Frame = 1
Query: 1 AQCVLVKHVLTAKIQYMANLCLKINAKLGGRNAIPAKKLPFVQDAPTIVFGADVNHPGAGNVSTPSIAAVVASMDRWVARHGSCVAVQEHRKES----------LLISFYRVNNSKPSRIIFFRDGVSEGQFREVLRYEVSVL 399
+QC+L KH+ A QY+AN+ LK+NAKLGG+N++ + LP V +APTI+FGADV HPG S PSIAAVVASMDR +H + + VQ HR E LL+ FY+ KPSRI+F+RDGVSEGQF+ VL +EV+ +
Sbjct: 604 SQCMLAKHIDKASPQYIANILLKVNAKLGGKNSVVREPLPKVSEAPTIIFGADVTHPGVTETSRPSIAAVVASMDRHCIKHAATIRVQGHRVEQIINLQEMVKELLVLFYKEARVKPSRILFYRDGVSEGQFQMVLNHEVTAI 746
BLAST of mRNA_H-elongata_contig93680.16801.1 vs. uniprot
Match: F0X160_9STRA (Argonaute2 (AGO2) putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0X160_9STRA) HSP 1 Score: 144 bits (362), Expect = 2.980e-37 Identity = 75/143 (52.45%), Postives = 98/143 (68.53%), Query Frame = 1
Query: 1 AQCVLVKHVLTAKIQYMANLCLKINAKLGGRNAIPAKKLPFVQDAPTIVFGADVNHPGAGNVSTPSIAAVVASMDRWVARHGSCVAVQEHRKES----------LLISFYRVNNSKPSRIIFFRDGVSEGQFREVLRYEVSVL 399
+QC+L KH+ A QY+AN+ LK+N KLGG+NA+ + LP V +APTI+FGADV HPG S PSIAAVVASMDR +H + + VQ HR E LL+ FY+ KP+RI+F+RDGVSEGQF+ VL +E+S +
Sbjct: 609 SQCMLWKHIDKASPQYIANILLKVNTKLGGKNAVVREPLPKVSEAPTIIFGADVTHPGLTERSRPSIAAVVASMDRHCIKHAATLRVQGHRVEQIINLQEMAKELLVLFYKEARVKPTRILFYRDGVSEGQFQMVLNHEISAI 751
BLAST of mRNA_H-elongata_contig93680.16801.1 vs. uniprot
Match: A0A507C0V6_9FUNG (Uncharacterized protein n=1 Tax=Synchytrium microbalum TaxID=1806994 RepID=A0A507C0V6_9FUNG) HSP 1 Score: 140 bits (354), Expect = 3.610e-36 Identity = 76/143 (53.15%), Postives = 94/143 (65.73%), Query Frame = 1
Query: 4 QCVLVKHVLTAKIQYMANLCLKINAKLGGRNA-IPAKKLPFVQDAPTIVFGADVNHPGAGNVSTPSIAAVVASMDRWVARHGSCVAVQEHRKE----------SLLISFYRVNNSKPSRIIFFRDGVSEGQFREVLRYEVSVL 399
QCVL KHV AK QY AN+CLKIN KLGG N+ + +LPFV + PTI+FGADV HP G+ S SIAA+V SMD +R+ + + VQ R+E LL +FY+ SKP R+I +RDGVSEGQF EVLR EV +
Sbjct: 557 QCVLAKHVFAAKRQYCANVCLKINVKLGGMNSYLSNAQLPFVSERPTIIFGADVTHPAPGSTSNQSIAALVGSMDAQCSRYAAAIRVQRGRQEVIQDLSGMVVELLKTFYQTCGSKPDRVIMYRDGVSEGQFSEVLRNEVEAI 699
BLAST of mRNA_H-elongata_contig93680.16801.1 vs. uniprot
Match: A0A507D171_9FUNG (Uncharacterized protein n=2 Tax=Synchytrium endobioticum TaxID=286115 RepID=A0A507D171_9FUNG) HSP 1 Score: 140 bits (352), Expect = 6.700e-36 Identity = 75/143 (52.45%), Postives = 94/143 (65.73%), Query Frame = 1
Query: 4 QCVLVKHVLTAKIQYMANLCLKINAKLGGRNA-IPAKKLPFVQDAPTIVFGADVNHPGAGNVSTPSIAAVVASMDRWVARHGSCVAVQEHRKE----------SLLISFYRVNNSKPSRIIFFRDGVSEGQFREVLRYEVSVL 399
QCVL KHV AK QY AN+CLKIN K+GG N+ + +LPFV + PTI+FGADV HP G+ S SIAA+V SMD +R+ + + VQ R+E LL +FY+ SKP RI+ +RDGVSEGQF EVLR EV +
Sbjct: 557 QCVLAKHVFAAKRQYCANVCLKINVKMGGMNSYLSNAQLPFVSERPTIIFGADVTHPAPGSTSNQSIAALVGSMDSQCSRYAAAIRVQRGRQEVIQDLTGMVVELLKTFYQTCGSKPDRIVMYRDGVSEGQFSEVLRNEVEAI 699
BLAST of mRNA_H-elongata_contig93680.16801.1 vs. uniprot
Match: A0A0L0HPF4_SPIPD (Uncharacterized protein n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0HPF4_SPIPD) HSP 1 Score: 139 bits (351), Expect = 8.910e-36 Identity = 74/143 (51.75%), Postives = 97/143 (67.83%), Query Frame = 1
Query: 4 QCVLVKHVLTAKIQYMANLCLKINAKLGGRNA-IPAKKLPFVQDAPTIVFGADVNHPGAGNVSTPSIAAVVASMDRWVARHGSCVAVQEHRKE----------SLLISFYRVNNSKPSRIIFFRDGVSEGQFREVLRYEVSVL 399
QC+ KHV AK QY AN+CLKIN KLGG N + + +LPFV + PTI+FGADV HP G+ + PSIAA+V SMD +R+ + + VQ+ R+E LL +FY+ SKP RI+F+RDGVSEGQF EV+R EV+ +
Sbjct: 548 QCMQAKHVFAAKKQYCANICLKINVKLGGMNCFLGSAQLPFVAERPTIIFGADVTHPAPGDHNKPSIAAIVGSMDAQCSRYAAAIRVQKGRQEIIKDLGGAVVELLRTFYQFCGSKPQRILFYRDGVSEGQFGEVVREEVAAI 690
BLAST of mRNA_H-elongata_contig93680.16801.1 vs. uniprot
Match: A0A1Y1YUR7_9FUNG (Piwi-domain-containing protein n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1YUR7_9FUNG) HSP 1 Score: 139 bits (349), Expect = 1.640e-35 Identity = 73/143 (51.05%), Postives = 95/143 (66.43%), Query Frame = 1
Query: 4 QCVLVKHVLTAKIQYMANLCLKINAKLGGRNA-IPAKKLPFVQDAPTIVFGADVNHPGAGNVSTPSIAAVVASMDRWVARHGSCVAVQEHRKE----------SLLISFYRVNNSKPSRIIFFRDGVSEGQFREVLRYEVSVL 399
QC+ KHV Q AN+CLK+N KLGG N+ + ++PF+ D PTIVFGADV HPG G + PSIAAVVASMDR V+++ SCV VQ R E LL++FY + KP++I+F+RDGVSEGQF VL E++ +
Sbjct: 543 QCIQGKHVFKPNKQLCANVCLKMNVKLGGVNSYLLPDQIPFISDIPTIVFGADVTHPGPGETTRPSIAAVVASMDRKVSKYASCVRVQAARTEIIADLAGMVKELLLAFYNTSRQKPAQILFYRDGVSEGQFAHVLHSEIAAV 685
BLAST of mRNA_H-elongata_contig93680.16801.1 vs. uniprot
Match: A0A8H7BXS2_9FUNG (Eukaryotic translation initiation factor 2C, 2 n=1 Tax=Apophysomyces ossiformis TaxID=679940 RepID=A0A8H7BXS2_9FUNG) HSP 1 Score: 138 bits (348), Expect = 2.230e-35 Identity = 73/143 (51.05%), Postives = 95/143 (66.43%), Query Frame = 1
Query: 4 QCVLVKHVLTAKIQYMANLCLKINAKLGGRNAI-PAKKLPFVQDAPTIVFGADVNHPGAGNVSTPSIAAVVASMDRWVARHGSCVAVQEHRKE----------SLLISFYRVNNSKPSRIIFFRDGVSEGQFREVLRYEVSVL 399
QC+ KHV AK QY AN+CLK+N KLGG N + P ++PF+ + PTIVFGADV HPG G+ + PSIAA+VASMD VA++ S + VQ HR E LL FY+ KP+ I+F+RDGVSEGQF+ V + E+ +
Sbjct: 525 QCLQYKHVQQAKHQYCANVCLKVNLKLGGSNILLPPAQIPFITEKPTIVFGADVTHPGPGDTTRPSIAALVASMDSRVAKYASAIRVQAHRTEIIADLANMVKELLKIFYQSCGQKPAHILFYRDGVSEGQFKIVQKAEIDAI 667 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig93680.16801.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig93680.16801.1 >prot_H-elongata_contig93680.16801.1 ID=prot_H-elongata_contig93680.16801.1|Name=mRNA_H-elongata_contig93680.16801.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=133bp AQCVLVKHVLTAKIQYMANLCLKINAKLGGRNAIPAKKLPFVQDAPTIVFback to top mRNA from alignment at H-elongata_contig93680:101..1148- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig93680.16801.1 ID=mRNA_H-elongata_contig93680.16801.1|Name=mRNA_H-elongata_contig93680.16801.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1048bp|location=Sequence derived from alignment at H-elongata_contig93680:101..1148- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig93680:101..1148- >mRNA_H-elongata_contig93680.16801.1 ID=mRNA_H-elongata_contig93680.16801.1|Name=mRNA_H-elongata_contig93680.16801.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=798bp|location=Sequence derived from alignment at H-elongata_contig93680:101..1148- (Himanthalia elongata Himel1 dioecious)back to top |