mRNA_H-elongata_contig87269.16270.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig87269.16270.1 vs. uniprot
Match: D8LQ30_ECTSI (Lactamase_B domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQ30_ECTSI) HSP 1 Score: 365 bits (937), Expect = 8.490e-124 Identity = 177/229 (77.29%), Postives = 202/229 (88.21%), Query Frame = 1
Query: 13 YRQLFEKESSTLTYILGDAESKEAIIIDPVDLTAERDAEMVIQMGLKPKMLINTHVHADHITGTGKLKGMLPD-TRSVISELSGAQADVKLADGDKVHFGSRFVEPARATPGHTAGCTTFVLDDKSACFTGDTLLIRGCGRTDFQGGSSEVLYSSVHSKIFTLPNDCTVYPAHDYKGRHSSTVGEEIKYNSRLTKSLDEFKDIMAKLNLSYPKKIDQAVPANIVCGIVD 696
+RQLFEKESST TYILGDAE+K+A+IIDPVD TAERD++MV +MGLKP +L+NTHVHADHITGTGKLKG+LP +S +SE SG QADVK+ DGDK+ FGSR++E ARATPGHTAGC TFVLDDKSACFTGDTLL+RGCGRTDFQGGSSE LY+SV KIFTLPNDCTVYP HDY+GRHSSTVGEE YN RLTK ++EF IM+ LNL YPK+ID+AVPAN+VCGI D
Sbjct: 151 FRQLFEKESSTFTYILGDAETKQAVIIDPVDKTAERDSQMVTEMGLKPTLLLNTHVHADHITGTGKLKGLLPGGAKSGVSEASGGQADVKIHDGDKIRFGSRYLE-ARATPGHTAGCMTFVLDDKSACFTGDTLLVRGCGRTDFQGGSSETLYASVKGKIFTLPNDCTVYPGHDYQGRHSSTVGEEKAYNPRLTKPVEEFVSIMSNLNLPYPKQIDKAVPANMVCGICD 378
BLAST of mRNA_H-elongata_contig87269.16270.1 vs. uniprot
Match: A0A7S4D913_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D913_HETAK) HSP 1 Score: 298 bits (764), Expect = 1.240e-99 Identity = 155/239 (64.85%), Postives = 184/239 (76.99%), Query Frame = 1
Query: 1 KSFEYRQLFEKESSTLTYILGDAESKEAIIIDPVDLTAERDAEMVIQMGLKPKMLINTHVHADHITGTGKLKGM-------LPDTRSVISELSGAQADVKLADGDKVHFGSRFVEPARATPGHTAGCTTFVLDDKSACFTGDTLLIRGCGRTDFQGGSSEVLYSSVHSKIFTLPNDCTVYPAHDYKGRHSSTVGEEIKYNSRLTKSLDEFKDIMAKLNLSYPKKIDQAVPANIVCGIVD 696
+S +RQLFE ESST TYILG +KEAIIIDPVDLTAERDA+ + +MGL NTHVHADH+TG+GKLK + LP RSVI+E+SGAQADVK+ DGD + FG+R V +TPGHT GC ++VLDD S FTGD LLIRGCGRTDFQ GS+E LY+SVHSKIFTLP+ C VYPAHDYKGR S+VGEE +N RLTK L+EFK+IM L L YPKKID ++PAN+VCG+ +
Sbjct: 5 RSLIFRQLFEAESSTYTYILGCPSTKEAIIIDPVDLTAERDAQFIREMGLTLVYAANTHVHADHVTGSGKLKQIFNVAESELP-VRSVIAEVSGAQADVKVNDGDVISFGTRSVR-VLSTPGHTDGCLSYVLDDNSMVFTGDALLIRGCGRTDFQQGSAETLYNSVHSKIFTLPDSCLVYPAHDYKGRTCSSVGEEKTHNLRLTKPLEEFKEIMDNLGLPYPKKIDASLPANMVCGLYE 241
BLAST of mRNA_H-elongata_contig87269.16270.1 vs. uniprot
Match: A0A6A4VV65_AMPAM (Persulfide dioxygenase ETHE1, mitochondrial n=1 Tax=Amphibalanus amphitrite TaxID=1232801 RepID=A0A6A4VV65_AMPAM) HSP 1 Score: 299 bits (765), Expect = 1.310e-99 Identity = 148/226 (65.49%), Postives = 180/226 (79.65%), Query Frame = 1
Query: 13 YRQLFEKESSTLTYILGDAESKEAIIIDPVDLTAERDAEMVIQMGLKPKMLINTHVHADHITGTGKLKGMLPDTRSVISELSGAQADVKLADGDKVHFGSRFVEPARATPGHTAGCTTFVLDDKSACFTGDTLLIRGCGRTDFQGGSSEVLYSSVHSKIFTLPNDCTVYPAHDYKGRHSSTVGEEIKYNSRLTKSLDEFKDIMAKLNLSYPKKIDQAVPANIVCGI 690
Y QLF++ES T TY+L D SKEA++IDPV ++RDA +V +GLK +INTH+HADHITGTG+LK ++P +SVIS SGA+ADVKLADGDKV FG+ +E RATPGHT GC T+VL + CFTGD LLIRGCGRTDFQGGSS+ LY SVH +IF+LP D TVYPAHDYKG+ +STVGEE +YN RLT++ +EF IMA LNL+YPKKID A+PAN VCG+
Sbjct: 18 YLQLFDRESCTYTYLLADPCSKEAVLIDPVIELSDRDATLVKDLGLKLVYVINTHMHADHITGTGRLKRLVPGCKSVISATSGAEADVKLADGDKVKFGALELE-VRATPGHTEGCVTYVLHSQRMCFTGDALLIRGCGRTDFQGGSSDTLYDSVHGRIFSLPEDYTVYPAHDYKGQTASTVGEEKRYNPRLTRNKEEFNAIMAGLNLAYPKKIDVALPANKVCGL 242
BLAST of mRNA_H-elongata_contig87269.16270.1 vs. uniprot
Match: UPI001C90BB25 (persulfide dioxygenase ETHE1, mitochondrial-like isoform X2 n=3 Tax=Amphibalanus amphitrite TaxID=1232801 RepID=UPI001C90BB25) HSP 1 Score: 300 bits (768), Expect = 6.960e-99 Identity = 148/230 (64.35%), Postives = 182/230 (79.13%), Query Frame = 1
Query: 1 KSFEYRQLFEKESSTLTYILGDAESKEAIIIDPVDLTAERDAEMVIQMGLKPKMLINTHVHADHITGTGKLKGMLPDTRSVISELSGAQADVKLADGDKVHFGSRFVEPARATPGHTAGCTTFVLDDKSACFTGDTLLIRGCGRTDFQGGSSEVLYSSVHSKIFTLPNDCTVYPAHDYKGRHSSTVGEEIKYNSRLTKSLDEFKDIMAKLNLSYPKKIDQAVPANIVCGI 690
+ F +RQLF++ES T TY+L D SKEA++IDPV ++RDA +V +GLK +INTH+HADHITGTG+LK ++P RSVIS SGA+AD+KLADGDKV FG+ +E RATPGHT GC T+VL + CFTGD LLIRGCGRTDFQGGSS+ LY SVH +IF+LP D TVYPAHDYKG+ ++TVGEE +YN RLT++ EF IMA LNL+YPKKID A+PAN VCG+
Sbjct: 3 QQFFFRQLFDRESCTYTYLLADPCSKEAVLIDPVIELSDRDATLVKDLGLKLVYVINTHMHADHITGTGRLKRLVPGCRSVISATSGAEADIKLADGDKVKFGALELE-VRATPGHTEGCVTYVLHSQRMCFTGDALLIRGCGRTDFQGGSSDTLYDSVHGRIFSLPEDYTVYPAHDYKGQTATTVGEEKRYNPRLTRNKQEFNAIMAGLNLAYPKKIDVALPANKVCGL 231
BLAST of mRNA_H-elongata_contig87269.16270.1 vs. uniprot
Match: UPI001C92582B (persulfide dioxygenase ETHE1, mitochondrial-like isoform X1 n=2 Tax=Amphibalanus amphitrite TaxID=1232801 RepID=UPI001C92582B) HSP 1 Score: 300 bits (768), Expect = 9.300e-99 Identity = 148/230 (64.35%), Postives = 182/230 (79.13%), Query Frame = 1
Query: 1 KSFEYRQLFEKESSTLTYILGDAESKEAIIIDPVDLTAERDAEMVIQMGLKPKMLINTHVHADHITGTGKLKGMLPDTRSVISELSGAQADVKLADGDKVHFGSRFVEPARATPGHTAGCTTFVLDDKSACFTGDTLLIRGCGRTDFQGGSSEVLYSSVHSKIFTLPNDCTVYPAHDYKGRHSSTVGEEIKYNSRLTKSLDEFKDIMAKLNLSYPKKIDQAVPANIVCGI 690
+ F +RQLF++ES T TY+L D SKEA++IDPV ++RDA +V +GLK +INTH+HADHITGTG+LK ++P RSVIS SGA+AD+KLADGDKV FG+ +E RATPGHT GC T+VL + CFTGD LLIRGCGRTDFQGGSS+ LY SVH +IF+LP D TVYPAHDYKG+ ++TVGEE +YN RLT++ EF IMA LNL+YPKKID A+PAN VCG+
Sbjct: 3 QQFFFRQLFDRESCTYTYLLADPCSKEAVLIDPVIELSDRDATLVKDLGLKLVYVINTHMHADHITGTGRLKRLVPGCRSVISATSGAEADIKLADGDKVKFGALELE-VRATPGHTEGCVTYVLHSQRMCFTGDALLIRGCGRTDFQGGSSDTLYDSVHGRIFSLPEDYTVYPAHDYKGQTATTVGEEKRYNPRLTRNKQEFNAIMAGLNLAYPKKIDVALPANKVCGL 231
BLAST of mRNA_H-elongata_contig87269.16270.1 vs. uniprot
Match: A0A1A7ZMU6_NOTFU (Ethylmalonic encephalopathy 1 n=14 Tax=Nothobranchius TaxID=28779 RepID=A0A1A7ZMU6_NOTFU) HSP 1 Score: 294 bits (753), Expect = 4.290e-98 Identity = 146/228 (64.04%), Postives = 177/228 (77.63%), Query Frame = 1
Query: 13 YRQLFEKESSTLTYILGDAESKEAIIIDPVDLTAERDAEMVIQMGLKPKMLINTHVHADHITGTGKLKGMLPDTRSVISELSGAQADVKLADGDKVHFGSRFVEPARATPGHTAGCTTFVLDDKSACFTGDTLLIRGCGRTDFQGGSSEVLYSSVHSKIFTLPNDCTVYPAHDYKGRHSSTVGEEIKYNSRLTKSLDEFKDIMAKLNLSYPKKIDQAVPANIVCGIVD 696
+RQLFEKES T TY+L D +KEA+IIDPV TA+RD ++V ++G K K +NTH HADHITGTG +K L +S IS+ SGA+AD+ L++GDK++FG F+ R TPGHT GC T VL+D+S FTGDTLLIRGCGRTDFQ GS E LY SVHSKIFTLP +C +YPAHDYKG+ ++TV EE YN RLTKSL EF DIM LNL++PKKID AVPAN++CGI D
Sbjct: 9 FRQLFEKESFTYTYLLADKSTKEAVIIDPVLETADRDVQLVKELGFKLKTAVNTHCHADHITGTGVMKKKLDTMKSAISKHSGAKADIHLSEGDKINFGQFFLS-VRETPGHTDGCITLVLNDESMAFTGDTLLIRGCGRTDFQQGSPEKLYQSVHSKIFTLPAECILYPAHDYKGQTATTVAEESTYNPRLTKSLKEFVDIMDNLNLAHPKKIDVAVPANLLCGIQD 235
BLAST of mRNA_H-elongata_contig87269.16270.1 vs. uniprot
Match: A0A1S3I4I9_LINUN (persulfide dioxygenase ETHE1, mitochondrial n=2 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3I4I9_LINUN) HSP 1 Score: 294 bits (752), Expect = 6.300e-98 Identity = 144/228 (63.16%), Postives = 182/228 (79.82%), Query Frame = 1
Query: 13 YRQLFEKESSTLTYILGDAESKEAIIIDPVDLTAERDAEMVIQMGLKPKMLINTHVHADHITGTGKLKGMLPDTRSVISELSGAQADVKLADGDKVHFGSRFVEPARATPGHTAGCTTFVLDDKSACFTGDTLLIRGCGRTDFQGGSSEVLYSSVHSKIFTLPNDCTVYPAHDYKGRHSSTVGEEIKYNSRLTKSLDEFKDIMAKLNLSYPKKIDQAVPANIVCGIVD 696
+RQLFE SST TYIL D E+KEA+IIDPV TAERDA++V ++GL K +NTHVHADH+TGTG+LK + +SVIS+ +GA+AD+ L +GDKV FG +E AR+TPGHT GC T+VL+DKS FTGD LLIRGCGRTDFQ GS LY SVH++I +LP DC +YPAHDYKGR ++VGEE+K+N RLTKS +EF +IM LNL+YPK+ID+AVPAN++CG+ +
Sbjct: 5 FRQLFESVSSTYTYILADEETKEAVIIDPVMETAERDAQLVEELGLTLKYAVNTHVHADHVTGTGELKKRIGGCKSVISKAAGAKADMFLNNGDKVEFGKYHLE-ARSTPGHTNGCMTYVLNDKSRAFTGDALLIRGCGRTDFQQGSPLTLYESVHTQILSLPQDCLLYPAHDYKGRTVTSVGEELKFNPRLTKSKEEFANIMNNLNLNYPKQIDRAVPANMMCGVFE 231
BLAST of mRNA_H-elongata_contig87269.16270.1 vs. uniprot
Match: A0A6J1MU31_BICAN (persulfide dioxygenase ETHE1, mitochondrial n=1 Tax=Bicyclus anynana TaxID=110368 RepID=A0A6J1MU31_BICAN) HSP 1 Score: 294 bits (753), Expect = 1.110e-97 Identity = 149/229 (65.07%), Postives = 179/229 (78.17%), Query Frame = 1
Query: 4 SFEYRQLFEKESSTLTYILGDAESKEAIIIDPVDLTAERDAEMVIQMGLKPKMLINTHVHADHITGTGKLKGMLPDTRSVISELSGAQADVKLADGDKVHFGSRFVEPARATPGHTAGCTTFVLDDKSACFTGDTLLIRGCGRTDFQGGSSEVLYSSVHSKIFTLPNDCTVYPAHDYKGRHSSTVGEEIKYNSRLTKSLDEFKDIMAKLNLSYPKKIDQAVPANIVCGI 690
+F +RQLF+ SST TY+LGD +S EA++IDPV AERDA ++ ++G K +NTH+HADHITGTGKLK +LP ++SVIS+ SGAQADV L DGD V+FG+ + A ATPGHT GC T++ ++ FTGDTLLIRGCGRTDFQ GSSE LY SVHSKIFTLP T+YPAHDYKG+ ++TVGEE KYN RLTKSL EF DIM LNL YPK ID+AVPAN VCG+
Sbjct: 36 NFFFRQLFDTVSSTYTYLLGDTKSGEAVLIDPVLEHAERDAALIKELGFKLIYAMNTHMHADHITGTGKLKSLLPGSKSVISKASGAQADVHLFDGDLVNFGA-YQLLATATPGHTNGCLTYISHEQGIAFTGDTLLIRGCGRTDFQEGSSETLYKSVHSKIFTLPESYTLYPAHDYKGQTATTVGEEKKYNPRLTKSLKEFVDIMENLNLPYPKMIDKAVPANRVCGL 263
BLAST of mRNA_H-elongata_contig87269.16270.1 vs. uniprot
Match: A0A835YKA0_9STRA (Beta-lactamase-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKA0_9STRA) HSP 1 Score: 296 bits (759), Expect = 1.370e-97 Identity = 145/228 (63.60%), Postives = 176/228 (77.19%), Query Frame = 1
Query: 13 YRQLFEKESSTLTYILGDAESKEAIIIDPVDLTAERDAEMVIQMGLKPKMLINTHVHADHITGTGKLKGMLPDTRSVISELSGAQADVKLADGDKVHFGSRFVEPARATPGHTAGCTTFVLDDKSACFTGDTLLIRGCGRTDFQGGSSEVLYSSVHSKIFTLPNDCTVYPAHDYKGRHSSTVGEEIKYNSRLTKSLDEFKDIMAKLNLSYPKKIDQAVPANIVCGIVD 696
+RQL + ESST TYIL DA +++AI+IDPVD AERDAE++ +MGL +NTHVHADH+ G KL+ + P RSVIS SGAQADV +A GD V F R V RATPGHT GC +FVLDD+S FTGD LLIRGCGRTDFQ G+S+ LY SVH+++FTLPND VYPAHDYKGR +ST+GEE +N RLTK ++EF+ IMA LNL+YPK+ID AVPAN+ CG+ D
Sbjct: 108 FRQLLDLESSTYTYILADAYTRDAIVIDPVDTMAERDAEIITEMGLNLLFALNTHVHADHVNGASKLRALFPQMRSVISRASGAQADVAVAPGDSVEFAGRSVV-VRATPGHTDGCCSFVLDDRSMVFTGDALLIRGCGRTDFQQGNSKSLYESVHTQLFTLPNDTIVYPAHDYKGRGNSTIGEERMFNPRLTKDIEEFQRIMAGLNLAYPKRIDAAVPANMKCGLYD 334
BLAST of mRNA_H-elongata_contig87269.16270.1 vs. uniprot
Match: A0A830H7Y5_9CHLO (Ethylmalonic encephalopathy 1 n=1 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A830H7Y5_9CHLO) HSP 1 Score: 291 bits (746), Expect = 3.790e-97 Identity = 147/228 (64.47%), Postives = 172/228 (75.44%), Query Frame = 1
Query: 13 YRQLFEKESSTLTYILGDAESKEAIIIDPVDLTAERDAEMVIQMGLKPKMLINTHVHADHITGTGKLKGMLPDTRSVISELSGAQADVKLADGDKVHFGSRFVEPARATPGHTAGCTTFVLDDKSACFTGDTLLIRGCGRTDFQGGSSEVLYSSVHSKIFTLPNDCTVYPAHDYKGRHSSTVGEEIKYNSRLTKSLDEFKDIMAKLNLSYPKKIDQAVPANIVCGIVD 696
+RQLF++ES T TY+L D E I+IDPV ERD E+ Q+ +K K L+NTH HADH+TGTG LK +LPD +SVIS+ SGA+ADV + DGD + FGSR V ATPGHT GC TFVLDDKS CFTGD +L+RGCGRTDFQ G + L+ SVH K+F+LP++ VYPAHDYKGR STVGEE KYN RLTKS DEF DIMA L L YPK ID AVPAN+VCGI D
Sbjct: 3 FRQLFDRESCTYTYLLADG--GEGILIDPVKELVERDVEVAQQLNVKLKYLLNTHCHADHVTGTGDLKKVLPDAKSVISKASGAKADVLVNDGDAIAFGSRHVT-VHATPGHTDGCVTFVLDDKSMCFTGDAVLVRGCGRTDFQQGDAGKLFDSVHEKVFSLPDETFVYPAHDYKGRTRSTVGEEKKYNLRLTKSRDEFIDIMANLGLPYPKMIDVAVPANLVCGIQD 227 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig87269.16270.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig87269.16270.1 >prot_H-elongata_contig87269.16270.1 ID=prot_H-elongata_contig87269.16270.1|Name=mRNA_H-elongata_contig87269.16270.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=233bp KSFEYRQLFEKESSTLTYILGDAESKEAIIIDPVDLTAERDAEMVIQMGLback to top mRNA from alignment at H-elongata_contig87269:254..2205+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig87269.16270.1 ID=mRNA_H-elongata_contig87269.16270.1|Name=mRNA_H-elongata_contig87269.16270.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1952bp|location=Sequence derived from alignment at H-elongata_contig87269:254..2205+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig87269:254..2205+ >mRNA_H-elongata_contig87269.16270.1 ID=mRNA_H-elongata_contig87269.16270.1|Name=mRNA_H-elongata_contig87269.16270.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1398bp|location=Sequence derived from alignment at H-elongata_contig87269:254..2205+ (Himanthalia elongata Himel1 dioecious)back to top |