mRNA_H-elongata_contig86144.16191.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig86144.16191.1 vs. uniprot
Match: A0A6H5KSG8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSG8_9PHAE) HSP 1 Score: 315 bits (806), Expect = 5.910e-93 Identity = 174/458 (37.99%), Postives = 270/458 (58.95%), Query Frame = 1
Query: 1 PKGKTVLGTRVVFKRKIEKDGRIEKYKCCLVAQGFRQVKGVHYEESSSPNPAQASIRMVLNMIAALGWEARQLDVDMTYLEADVEEEIYVEIPEAYRDSREQVGLLKKAMYGLVHAGLLW*KQFGIELEAKGFQRSQADPCVFRRILHGIVVVVIVVYVDDLLVASATKGDEE*AVKDLCSCFPIKDLGEASYYLGCYITRDRNAGTLKFDQHQYIQTVAERFGVTKTSIVP*A-----------EKMRQIPSREIVGALMWAATMTRPDISFTAHQLAKFNDNPGPTHWRASRKALQYLWRTRDVGITYGGEPGGGGKLSAWIDADYGTCPDTRRSVSGGVVMMADGAISWFSRVQKVTAAASSESEYIALAEMVNELRFLRQVKEFMTPPID-AAIKIHEDNEDAIKMAKNRFSSHRTRHVDIKHHIVRDAIDGGVVHIEYVRSGEQHADILTKSV 1338
P+G+ + ++ F K K+G+I+ +K LVA+GF Q+ V Y SSSP P+ ASI+++L + G DV Y A ++EE+++++P D ++ ++A+YGL +G W L GF++ +ADPCVFR+++ +VV++IV+YVDD+LVA + + EE + L FP K+LGE ++ GC I RD AGTL+ Q YI ++ ERF V TS +P E+ + P RE +G++MW +T +RPD+SF +A+ P HW A +K L YL TRD+GITY + G G L+ ++DA Y D RRSVSG + +S S+ Q + + +S+E+EYIA E V E F+R V F+ P ++IK+ EDN+ AI + +N SS RT+H+D+++H +R G + +++V + EQHAD+LTK++
Sbjct: 776 PEGRRPVSSKWCFSWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEE-LLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITY--QRGSGLGLAVYVDASYADTED-RRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIKVLEDNQGAIALVQNPLSSGRTKHIDVRYHFIRGLFRSGDISVKFVPTTEQHADLLTKAL 1229
BLAST of mRNA_H-elongata_contig86144.16191.1 vs. uniprot
Match: A0A6H5JZQ8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ8_9PHAE) HSP 1 Score: 315 bits (806), Expect = 4.700e-92 Identity = 174/458 (37.99%), Postives = 270/458 (58.95%), Query Frame = 1
Query: 1 PKGKTVLGTRVVFKRKIEKDGRIEKYKCCLVAQGFRQVKGVHYEESSSPNPAQASIRMVLNMIAALGWEARQLDVDMTYLEADVEEEIYVEIPEAYRDSREQVGLLKKAMYGLVHAGLLW*KQFGIELEAKGFQRSQADPCVFRRILHGIVVVVIVVYVDDLLVASATKGDEE*AVKDLCSCFPIKDLGEASYYLGCYITRDRNAGTLKFDQHQYIQTVAERFGVTKTSIVP*A-----------EKMRQIPSREIVGALMWAATMTRPDISFTAHQLAKFNDNPGPTHWRASRKALQYLWRTRDVGITYGGEPGGGGKLSAWIDADYGTCPDTRRSVSGGVVMMADGAISWFSRVQKVTAAASSESEYIALAEMVNELRFLRQVKEFMTPPID-AAIKIHEDNEDAIKMAKNRFSSHRTRHVDIKHHIVRDAIDGGVVHIEYVRSGEQHADILTKSV 1338
P+G+ + ++ F K K+G+I+ +K LVA+GF Q+ V Y SSSP P+ ASI+++L + G DV Y A ++EE+++++P D ++ ++A+YGL +G W L GF++ +ADPCVFR+++ +VV++IV+YVDD+LVA + + EE + L FP K+LGE ++ GC I RD AGTL+ Q YI ++ ERF V TS +P E+ + P RE +G++MW +T +RPD+SF +A+ P HW A +K L YL TRD+GITY + G G L+ ++DA Y D RRSVSG + +S S+ Q + + +S+E+EYIA E V E F+R V F+ P ++IK+ EDN+ AI + +N SS RT+H+D+++H +R G + +++V + EQHAD+LTK++
Sbjct: 1155 PEGRRPVSSKWCFSWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEE-LLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITY--QRGSGLGLAVYVDASYADTED-RRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIKVLEDNQGAIALVQNPLSSGRTKHIDVRYHFIRGLFRSGDISVKFVPTTEQHADLLTKAL 1608
BLAST of mRNA_H-elongata_contig86144.16191.1 vs. uniprot
Match: A0A6H5JN00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN00_9PHAE) HSP 1 Score: 315 bits (806), Expect = 5.330e-92 Identity = 174/458 (37.99%), Postives = 270/458 (58.95%), Query Frame = 1
Query: 1 PKGKTVLGTRVVFKRKIEKDGRIEKYKCCLVAQGFRQVKGVHYEESSSPNPAQASIRMVLNMIAALGWEARQLDVDMTYLEADVEEEIYVEIPEAYRDSREQVGLLKKAMYGLVHAGLLW*KQFGIELEAKGFQRSQADPCVFRRILHGIVVVVIVVYVDDLLVASATKGDEE*AVKDLCSCFPIKDLGEASYYLGCYITRDRNAGTLKFDQHQYIQTVAERFGVTKTSIVP*A-----------EKMRQIPSREIVGALMWAATMTRPDISFTAHQLAKFNDNPGPTHWRASRKALQYLWRTRDVGITYGGEPGGGGKLSAWIDADYGTCPDTRRSVSGGVVMMADGAISWFSRVQKVTAAASSESEYIALAEMVNELRFLRQVKEFMTPPID-AAIKIHEDNEDAIKMAKNRFSSHRTRHVDIKHHIVRDAIDGGVVHIEYVRSGEQHADILTKSV 1338
P+G+ + ++ F K K+G+I+ +K LVA+GF Q+ V Y SSSP P+ ASI+++L + G DV Y A ++EE+++++P D ++ ++A+YGL +G W L GF++ +ADPCVFR+++ +VV++IV+YVDD+LVA + + EE + L FP K+LGE ++ GC I RD AGTL+ Q YI ++ ERF V TS +P E+ + P RE +G++MW +T +RPD+SF +A+ P HW A +K L YL TRD+GITY + G G L+ ++DA Y D RRSVSG + +S S+ Q + + +S+E+EYIA E V E F+R V F+ P ++IK+ EDN+ AI + +N SS RT+H+D+++H +R G + +++V + EQHAD+LTK++
Sbjct: 1175 PEGRRPVSSKWCFSWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDQVVVMIIVIYVDDILVAGSDEDCEE-LLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITY--QRGSGLGLAVYVDASYADTED-RRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIKVLEDNQGAIALVQNPLSSGRTKHIDVRYHFIRGLFRSGDISVKFVPTTEQHADLLTKAL 1628
BLAST of mRNA_H-elongata_contig86144.16191.1 vs. uniprot
Match: A0A6H5KF60_9PHAE (Uncharacterized protein n=12 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF60_9PHAE) HSP 1 Score: 315 bits (806), Expect = 5.820e-92 Identity = 174/458 (37.99%), Postives = 270/458 (58.95%), Query Frame = 1
Query: 1 PKGKTVLGTRVVFKRKIEKDGRIEKYKCCLVAQGFRQVKGVHYEESSSPNPAQASIRMVLNMIAALGWEARQLDVDMTYLEADVEEEIYVEIPEAYRDSREQVGLLKKAMYGLVHAGLLW*KQFGIELEAKGFQRSQADPCVFRRILHGIVVVVIVVYVDDLLVASATKGDEE*AVKDLCSCFPIKDLGEASYYLGCYITRDRNAGTLKFDQHQYIQTVAERFGVTKTSIVP*A-----------EKMRQIPSREIVGALMWAATMTRPDISFTAHQLAKFNDNPGPTHWRASRKALQYLWRTRDVGITYGGEPGGGGKLSAWIDADYGTCPDTRRSVSGGVVMMADGAISWFSRVQKVTAAASSESEYIALAEMVNELRFLRQVKEFMTPPID-AAIKIHEDNEDAIKMAKNRFSSHRTRHVDIKHHIVRDAIDGGVVHIEYVRSGEQHADILTKSV 1338
P+G+ + ++ F K K+G+I+ +K LVA+GF Q+ V Y SSSP P+ ASI+++L + G DV Y A ++EE+++++P D ++ ++A+YGL +G W L GF++ +ADPCVFR+++ +VV++IV+YVDD+LVA + + EE + L FP K+LGE ++ GC I RD AGTL+ Q YI ++ ERF V TS +P E+ + P RE +G++MW +T +RPD+SF +A+ P HW A +K L YL TRD+GITY + G G L+ ++DA Y D RRSVSG + +S S+ Q + + +S+E+EYIA E V E F+R V F+ P ++IK+ EDN+ AI + +N SS RT+H+D+++H +R G + +++V + EQHAD+LTK++
Sbjct: 1318 PEGRRPVSSKWCFSWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEE-LLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITY--QRGSGLGLAVYVDASYADTED-RRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIKVLEDNQGAIALVQNPLSSGRTKHIDVRYHFIRGLFRSGDISVKFVPTTEQHADLLTKAL 1771
BLAST of mRNA_H-elongata_contig86144.16191.1 vs. uniprot
Match: A0A6H5KKK1_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKK1_9PHAE) HSP 1 Score: 303 bits (775), Expect = 4.160e-90 Identity = 166/453 (36.64%), Postives = 267/453 (58.94%), Query Frame = 1
Query: 16 VLGTRVVFKRKIEKDGRIEKYKCCLVAQGFRQVKGVHYEESSSPNPAQASIRMVLNMIAALGWEARQLDVDMTYLEADVEEEIYVEIPEAYRDSREQVGLLKKAMYGLVHAGLLW*KQFGIELEAKGFQRSQADPCVFRRILHGIVVVVIVVYVDDLLVASATKGDEE*AVKDLCSCFPIKDLGEASYYLGCYITRDRNAGTLKFDQHQYIQTVAERFGVTKTSIVP*A-----------EKMRQIPSREIVGALMWAATMTRPDISFTAHQLAKFNDNPGPTHWRASRKALQYLWRTRDVGITYGGEPGGGGKLSAWIDADYGTCPDTRRSVSGGVVMMADGAISWFSRVQKVTAAASSESEYIALAEMVNELRFLRQVKEFMTPPIDAA-IKIHEDNEDAIKMAKNRFSSHRTRHVDIKHHIVRDAIDGGVVHIEYVRSGEQHADILTKSV 1338
V+ R VFK K ++ G+I K K LVA+GF+Q GV Y E+ SP AS R+V+ + E D++ +++++++ E+++++P +V L K++YGL A + K+ EL+ GF++S +DPCV R ++ VV ++ ++VDD+L A TK E V L P K+LGE ++LGC RDR AGT++ Q YI++V ERF V +TS +P + E +P RE+VG+LMW A TRPDIS +A+ + P +HW+A++K L YL T + + + + ++DAD+ + + RRSVSG +V++A + W S+ QK + ++SE+EY+A+ + V E F+ + +F+ P I + EDNE AI +A+N SS R++H+D++HH +R+ + GV+ + +V S EQHADILTK++
Sbjct: 492 VIDARWVFKWKADETGKIVKAKARLVAKGFKQKYGVDYLETFSPTANAASHRLVVALACKYNLELLHWDIEQAFVQSELDYEVFMKLPPGCGSMSGKVVRLNKSLYGLKQASRTFYKRLVSELKRIGFEQSMSDPCVLRFMMGDEVVGMVAIHVDDILYAG-TKSLAEVVVAALGDSLPTKNLGEVRFFLGCAFVRDREAGTIEMSQESYIRSVLERFNVCRTSSIPASPTNDYRSVMEDEGAGDVPFREVVGSLMWIANQTRPDISNAVRAVARHSHEPKKSHWKAAQKILNYLLETAHLTLKFKPDNSVDASTLVYVDADFASKANDRRSVSGAIVLVASMPVVWISKTQKCVSQSTSEAEYLAMGDGVKEALFVNGMLQFLRPSAKPRKIDVLEDNEGAIALAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSEEQHADILTKAL 943
BLAST of mRNA_H-elongata_contig86144.16191.1 vs. uniprot
Match: A0A6H5JV80_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV80_9PHAE) HSP 1 Score: 297 bits (760), Expect = 5.770e-90 Identity = 167/458 (36.46%), Postives = 267/458 (58.30%), Query Frame = 1
Query: 1 PKGKTVLGTRVVFKRKIEKDGRIEKYKCCLVAQGFRQVKGVHYEESSSPNPAQASIRMVLNMIAALGWEARQLDVDMTYLEADVEEEIYVEIPEAYRDSREQVGLLKKAMYGLVHAGLLW*KQFGIELEAKGFQRSQADPCVFRRILHGIVVVVIVVYVDDLLVASATKGDEE*AVKDLCSCFPIKDLGEASYYLGCYITRDRNAGTLKFDQHQYIQTVAERFGVTKTSIVP*A-----------EKMRQIPSREIVGALMWAATMTRPDISFTAHQLAKFNDNPGPTHWRASRKALQYLWRTRDVGITYGGEPGGGGKLSAWIDADYGTCPDTRRSVSGGVVMMADGAISWFSRVQKVTAAASSESEYIALAEMVNELRFLRQVKEFMTPPIDAA-IKIHEDNEDAIKMAKNRFSSHRTRHVDIKHHIVRDAIDGGVVHIEYVRSGEQHADILTKSV 1338
P+G V+ R VFK K ++ G+I K K LVA+GF+Q GV Y E+ SP ASIR+V+ + E LD++ + ++ ++ E+ +++P ++ L K++YGL A + K+ +L GF++S +DPCV R ++ V+ +I ++VDD+L A TK E V+ L P K+LGE ++LGC +RDR AGT++ Q YI++V ERF + +TS +P + E+ +P RE+VG LMW A TRP+ S +A+ + P + W+A++K L YL T + + Y + ++DAD+ + RRSVSG +V++A +SWFS QK + ++SE+EYIA+ + V E F+ + + + P I + EDNE AI +A+N SS R++H+D++HH +R+ + GV+ + +V S EQHADILTK++
Sbjct: 252 PEGCNVIDARWVFKWKADETGKIVKAKARLVAKGFKQKHGVDYLETFSPTANAASIRLVVALACKYNLELLHLDIEQAFFQSKLDHEVLMKLPPGCDSMSGKIVRLNKSLYGLKQASRTFYKRLVSDLLRIGFEQSLSDPCVLRFMMGDEVMGIIAIHVDDILYAG-TKRLAEVIVEALGDSLPTKNLGEVRFFLGCAFSRDREAGTIEISQESYIRSVLERFNICRTSSIPASPANDSRSVMEDEEAGDVPFREVVGCLMWIANNTRPETSNAVRTVARHSHEPKKSDWKAAQKILSYLKETAHLTLKYKQDTTVDVGTLVYVDADFASKATDRRSVSGALVLVAGCLVSWFSWTQKCVSLSTSEAEYIAMGDGVKEALFVNGMLQLLRPSAKPRKIDVFEDNEGAIALAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSKEQHADILTKAL 708
BLAST of mRNA_H-elongata_contig86144.16191.1 vs. uniprot
Match: A0A6H5JRL9_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRL9_9PHAE) HSP 1 Score: 305 bits (780), Expect = 3.180e-89 Identity = 168/458 (36.68%), Postives = 269/458 (58.73%), Query Frame = 1
Query: 1 PKGKTVLGTRVVFKRKIEKDGRIEKYKCCLVAQGFRQVKGVHYEESSSPNPAQASIRMVLNMIAALGWEARQLDVDMTYLEADVEEEIYVEIPEAYRDSREQVGLLKKAMYGLVHAGLLW*KQFGIELEAKGFQRSQADPCVFRRILHGIVVVVIVVYVDDLLVASATKGDEE*AVKDLCSCFPIKDLGEASYYLGCYITRDRNAGTLKFDQHQYIQTVAERFGVTKTSIVP*A-----------EKMRQIPSREIVGALMWAATMTRPDISFTAHQLAKFNDNPGPTHWRASRKALQYLWRTRDVGITYGGEPGGGGKLSAWIDADYGTCPDTRRSVSGGVVMMADGAISWFSRVQKVTAAASSESEYIALAEMVNELRFLRQVKEFMTPPIDAA-IKIHEDNEDAIKMAKNRFSSHRTRHVDIKHHIVRDAIDGGVVHIEYVRSGEQHADILTKSV 1338
P G V+ R VFK K ++ G+I K K LVA+GF+Q GV Y E+ SP AS R+V+ + E D++ +++++++ E+++++P +V L K++YGL A + K+ EL+ GF++S +DPCV R ++ VV ++ ++VDD+L A TK E V L P K+LGE ++LGC RDR AGT++ Q YI++V ERF V +TS +P + E +P RE+VG+LMW A TRPDIS +A+ + P +HW+A++K L YL T + + + + ++DAD+ + + RRSVSG +V++A + W S+ QK + ++SE+EY+A+ + V E F+ + +F+ P I + EDNE AI +A+N SS R++H+D++HH +R+ + GV+ + +V S EQHADILTK++
Sbjct: 754 PIGCNVIDARWVFKWKADETGKIVKAKARLVAKGFKQKYGVDYLETFSPTANAASHRLVVALACKYNLELLHWDIEQAFVQSELDYEVFMKLPPGCGSMSGKVVRLNKSLYGLKQASRTFYKRLVSELKRIGFEQSMSDPCVLRFMMGDEVVGMVAIHVDDILYAG-TKSLAEVVVAALGDSLPTKNLGEVRFFLGCAFVRDREAGTIEMSQESYIRSVLERFNVCRTSSIPASPTNDYRSVMEDEGAGDVPFREVVGSLMWIANQTRPDISNAVRAVARHSHEPKKSHWKAAQKILNYLLETAHLTLKFKPDNSVDASTLVYVDADFASKANDRRSVSGAIVLVASMPVVWISKTQKCVSQSTSEAEYLAMGDGVKEALFVNGMLQFLRPSAKPRKIDVLEDNEGAIALAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSEEQHADILTKAL 1210
BLAST of mRNA_H-elongata_contig86144.16191.1 vs. uniprot
Match: A0A6H5KZH7_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZH7_9PHAE) HSP 1 Score: 304 bits (778), Expect = 1.410e-88 Identity = 168/458 (36.68%), Postives = 269/458 (58.73%), Query Frame = 1
Query: 1 PKGKTVLGTRVVFKRKIEKDGRIEKYKCCLVAQGFRQVKGVHYEESSSPNPAQASIRMVLNMIAALGWEARQLDVDMTYLEADVEEEIYVEIPEAYRDSREQVGLLKKAMYGLVHAGLLW*KQFGIELEAKGFQRSQADPCVFRRILHGIVVVVIVVYVDDLLVASATKGDEE*AVKDLCSCFPIKDLGEASYYLGCYITRDRNAGTLKFDQHQYIQTVAERFGVTKTSIVP*A-----------EKMRQIPSREIVGALMWAATMTRPDISFTAHQLAKFNDNPGPTHWRASRKALQYLWRTRDVGITYGGEPGGGGKLSAWIDADYGTCPDTRRSVSGGVVMMADGAISWFSRVQKVTAAASSESEYIALAEMVNELRFLRQVKEFMTPPIDAA-IKIHEDNEDAIKMAKNRFSSHRTRHVDIKHHIVRDAIDGGVVHIEYVRSGEQHADILTKSV 1338
P G V+ R VFK K ++ G+I K K LVA+GF+Q GV Y E+ SP AS R+V+ + E D++ +++++++ E+++++P E+V L K++YGL A + K+ EL+ GF++S +DPCV R ++ VV ++ ++VDD+L A TK E V L P K+LGE ++LGC RDR AGT++ Q YI++V ERF + +TS +P + E +P RE+VG+LMW A+ TR DIS +A+ + P +HW+A++K L YL T + + + + ++DAD+ + RRSVSG +V +A + W SR QK + ++SE+EY+A+ + V E F+ + +F+ P + I + EDNE AI +A+N SS R++H+D++HH +R+ + GV+ + +V S EQHADILTK++
Sbjct: 928 PIGCNVIDARWVFKWKADETGKIVKAKARLVAKGFKQKYGVDYLETFSPTANAASFRLVVALACKYNLELLHWDIEQAFVQSELDHEVFMKMPPGCGSMSEKVVRLNKSLYGLKQASRTFYKRLVSELKRIGFEQSMSDPCVLRFMMGDEVVGMVAIHVDDILYAG-TKSLAEVVVAALGDSLPTKNLGEVKFFLGCEYIRDRKAGTIEISQESYIRSVLERFNIVRTSSIPASLNNDDRSLMEEEGAGDVPFREVVGSLMWIASQTRADISNAVRAVARHSHEPKKSHWKAAQKILNYLLETAHLTLKFKRDSSVDVGTLVYVDADFASKATDRRSVSGAMVFVAAMLVVWISRTQKCVSQSTSEAEYLAMGDGVKEALFVNGMLQFLRPSVKPRKIDVLEDNEGAIALAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSKEQHADILTKAL 1384
BLAST of mRNA_H-elongata_contig86144.16191.1 vs. uniprot
Match: A0A6H5L3I1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3I1_9PHAE) HSP 1 Score: 302 bits (773), Expect = 1.510e-88 Identity = 168/458 (36.68%), Postives = 268/458 (58.52%), Query Frame = 1
Query: 1 PKGKTVLGTRVVFKRKIEKDGRIEKYKCCLVAQGFRQVKGVHYEESSSPNPAQASIRMVLNMIAALGWEARQLDVDMTYLEADVEEEIYVEIPEAYRDSREQVGLLKKAMYGLVHAGLLW*KQFGIELEAKGFQRSQADPCVFRRILHGIVVVVIVVYVDDLLVASATKGDEE*AVKDLCSCFPIKDLGEASYYLGCYITRDRNAGTLKFDQHQYIQTVAERFGVTKTSIVP*A-----------EKMRQIPSREIVGALMWAATMTRPDISFTAHQLAKFNDNPGPTHWRASRKALQYLWRTRDVGITYGGEPGGGGKLSAWIDADYGTCPDTRRSVSGGVVMMADGAISWFSRVQKVTAAASSESEYIALAEMVNELRFLRQVKEFMTPPIDAA-IKIHEDNEDAIKMAKNRFSSHRTRHVDIKHHIVRDAIDGGVVHIEYVRSGEQHADILTKSV 1338
P G V+ R VFK K ++ G+I K K LVA+GF+Q GV Y E+ SP AS R+V+ + E D++ +++++++ E+++++P E+V L K++YGL A + K+ EL+ GF++S +DPCV ++ VV ++ ++VDD+L A TK E V L P K+LGE ++LGC RDR AGT++ Q YI++V ERF + +TS +P + E +P RE+VG+LMW A+ TR DIS +A+ + P +HW+A++K L YL T + + + + ++DAD+ + RRSVSG +V +A + W SR QK + ++SESEY+A+ + V E F+ + +F+ P + I + EDNE AI +A+N SS R++H+D++HH +R+ + GV+ + +V S EQHADILTK++
Sbjct: 718 PIGCNVIDARWVFKWKADETGKIVKAKARLVAKGFKQKYGVDYLETFSPTANAASFRLVVALACKYNLELLHWDIEQAFVQSELDHEVFMKMPPGCGSMSEKVVRLNKSLYGLKQASRTFYKRLVSELKRIGFEQSMSDPCVLCFMMGDEVVGMVAIHVDDILYAG-TKSLAEVVVAALGDSLPTKNLGEVKFFLGCEYIRDRKAGTIEISQESYIRSVLERFNIVRTSSIPASLNNDDRSLMEEEGAGDVPFREVVGSLMWIASQTRADISNAVRAVARHSHEPKKSHWKAAQKILNYLLETAHLTLKFKRDSSVDVGTLVYVDADFASKATDRRSVSGAMVFVAAMLVVWISRTQKCVSQSTSESEYLAMGDGVKEALFVNGMLQFLRPSVKPRKIDVLEDNEGAIALAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSKEQHADILTKAL 1174
BLAST of mRNA_H-elongata_contig86144.16191.1 vs. uniprot
Match: A0A6H5JKS3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKS3_9PHAE) HSP 1 Score: 295 bits (755), Expect = 8.010e-86 Identity = 170/459 (37.04%), Postives = 258/459 (56.21%), Query Frame = 1
Query: 1 PKGKTVLGTRVVFKRKIEKDGRIEKYKCCLVAQGFRQVKGVHYEESSSPNPAQASIRMVLNMIAALGWEARQLDVDMTYLEADVEEEIYVEIPEAYRDSREQVGLLKKAMYGLVHAGLLW*KQFGIELEAKGFQRSQADPCVFRRILHGIVVVVIVVYVDDLLVASATKGDEE*AVKDLCSCFPIKDLGEASYYLGCYITRDRNAGTLKFDQHQYIQTVAERFGVTKTSIVP*AEKMRQI------------PSREIVGALMWAATMTRPDISFTAHQLAKFNDNPGPTHWRASRKALQYLWRTRDVGITYGGEPGGGGKLSAWIDADYGTCPDTRRSVSGGVVMMADGAISWFSRVQKVTAAASSESEYIALAEMVNELRFLRQVKEFMTPPIDAA-IKIHEDNEDAIKMAKNRFSSHRTRHVDIKHHIVRDAIDGGVVHIEYVRSGEQHADILTKSV 1338
P+G+ + T+ VF K ++ G I +K LVA+GF QV G Y SSS PA +SI++ + G R D+ Y A ++EE+YV I + +V +++A+YGL +G W + L G+++ +ADPCVFR+I+ G VV +IV+YVDD++ + + EE + L P+KDLGE ++Y GC I RD GT Q YI + +RFG+T T+ P A+ ++ P R+ +G LMW AT TRPDI+ + + + P W+A + L YL T D+GITY G G L ++DA Y RRSV+G V + +S S+ Q++ + ++SE+EYIA E V E F+R V F+ P A IK+ EDN+ AI + +N FSS R++H+D++ H +R+ G + +EY+ + EQHAD+LTK++
Sbjct: 775 PEGRKAVSTKWVFDYKTDEKGLITDFKARLVARGFSQVHGQDYHHSSSACPAVSSIKLAMAFATEGGLPTRHFDIKQAYTHAKIQEELYVRIADGSGAMAGKVLKVERALYGLKQSGREWGFEAANILVDSGYEQCRADPCVFRKIVDGKVVSIIVIYVDDIMYVGSEEEGEE-LLTSLRKTLPVKDLGECTWYDGCAIERDLELGTTTLSQKAYIAGLMDRFGITTTASTP-ADPNAELGPKRDDEPGVDKPVRQAIGCLMWPATFTRPDIATALNAVQRNAHAPTMRDWKALVQILSYLNATMDLGITY--VRGSGLDLEVYVDASYADRDTGRRSVTGIAVTVGGTVVSHASKTQRIVSLSTSEAEYIAAGEGVKEALFVRAVLSFIAPETSGAKIKVLEDNQGAISLVQNPFSSARSKHIDVRFHFIRELFKSGRISVEYIPTDEQHADLLTKAL 1229 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig86144.16191.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig86144.16191.1 >prot_H-elongata_contig86144.16191.1 ID=prot_H-elongata_contig86144.16191.1|Name=mRNA_H-elongata_contig86144.16191.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=210bp MRQIPSREIVGALMWAATMTRPDISFTAHQLAKFNDNPGPTHWRASRKALback to top mRNA from alignment at H-elongata_contig86144:183..1574- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig86144.16191.1 ID=mRNA_H-elongata_contig86144.16191.1|Name=mRNA_H-elongata_contig86144.16191.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1392bp|location=Sequence derived from alignment at H-elongata_contig86144:183..1574- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig86144:183..1574- >mRNA_H-elongata_contig86144.16191.1 ID=mRNA_H-elongata_contig86144.16191.1|Name=mRNA_H-elongata_contig86144.16191.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1260bp|location=Sequence derived from alignment at H-elongata_contig86144:183..1574- (Himanthalia elongata Himel1 dioecious)back to top |