mRNA_H-elongata_contig85835.16164.1 (mRNA) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig85835.16164.1 vs. uniprot
Match: D8LEZ3_ECTSI (Vac14_Fig4_bd domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEZ3_ECTSI) HSP 1 Score: 338 bits (867), Expect = 1.380e-109 Identity = 181/199 (90.95%), Postives = 192/199 (96.48%), Query Frame = 1
Query: 1 QVLARVSLNEEHFNHVLEEILQLFSQKRRLLETRGGLIIRKLCVLLQPKTIYVALASVLQANSDLDFIGVMVEALNLILLTASELEELRQALKLSTKSDAAAEDRDLFASLFACWCHNPVATFSLCLLAQAYDVSAELVKEVAEVEITVGFLMQVDKLVQLLESPIFLHLRLQLLDVDSPSYPALLKSLYGILMLLPQA 597
QVLAR+SLNEE FNHVLEEILQLFS +RRLLETRGGLIIRKLCVLLQPKTIYVA+ASVLQ NSDL+FIGVMVEALNLILLTA ELEELRQAL+LST+SDA+ EDR+LFA+LFACWCHNPVATFSLCLLAQAYDVSAELVKEVAEVEITVGFLMQVDKLVQL+ESPIFL LRLQLLDVDSPSYP LLKSLYGILMLLPQ+
Sbjct: 408 QVLARISLNEEQFNHVLEEILQLFSDQRRLLETRGGLIIRKLCVLLQPKTIYVAVASVLQTNSDLEFIGVMVEALNLILLTAGELEELRQALRLSTRSDASPEDRELFAALFACWCHNPVATFSLCLLAQAYDVSAELVKEVAEVEITVGFLMQVDKLVQLIESPIFLRLRLQLLDVDSPSYPFLLKSLYGILMLLPQS 606
BLAST of mRNA_H-elongata_contig85835.16164.1 vs. uniprot
Match: A0A835YJ67_9STRA (Vacuolar protein 14 C-terminal Fig4p binding-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJ67_9STRA) HSP 1 Score: 261 bits (666), Expect = 2.920e-80 Identity = 133/199 (66.83%), Postives = 171/199 (85.93%), Query Frame = 1
Query: 1 QVLARVSLNEEHFNHVLEEILQLFSQKRRLLETRGGLIIRKLCVLLQPKTIYVALASVLQANSDLDFIGVMVEALNLILLTASELEELRQALKLSTKSDAAAEDRDLFASLFACWCHNPVATFSLCLLAQAYDVSAELVKEVAEVEITVGFLMQVDKLVQLLESPIFLHLRLQLLDVDSPSYPALLKSLYGILMLLPQA 597
QVLAR+ L + F VL I+ +F++ RRLLE RG LI+RKLC+LL ++IY+ALA+VL+ +DL F+ +MV++LNLILLTA+EL+E+R+ALK S + +AA ED +FASLF+CWCH+PV+TFSLCLLA+AYD+SA +V E ++VE+TVGFLMQVDKLVQLLESPIFLHLRLQLLDV +PSYPAL+KSLYG+LMLLPQ+
Sbjct: 412 QVLARIGLAQSEFQRVLNSIMDVFTEDRRLLEVRGSLIVRKLCLLLNARSIYMALAAVLEGKTDLQFVSLMVQSLNLILLTAAELDEVRRALKASFQPNAAPEDTQVFASLFSCWCHSPVSTFSLCLLAKAYDLSAAVVSEFSDVEVTVGFLMQVDKLVQLLESPIFLHLRLQLLDVSAPSYPALVKSLYGLLMLLPQS 610
BLAST of mRNA_H-elongata_contig85835.16164.1 vs. uniprot
Match: A0A7S2F1M7_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F1M7_9STRA) HSP 1 Score: 249 bits (635), Expect = 2.310e-79 Identity = 137/201 (68.16%), Postives = 165/201 (82.09%), Query Frame = 1
Query: 1 QVLARVSLNEEHFNHVLEEILQLFSQKRRLLETRGGLIIRKLCVLLQPKTIYVALASVLQ--ANSDLDFIGVMVEALNLILLTASELEELRQALKLSTKSDAAAEDRDLFASLFACWCHNPVATFSLCLLAQAYDVSAELVKEVAEVEITVGFLMQVDKLVQLLESPIFLHLRLQLLDVDSPSYPALLKSLYGILMLLPQA 597
+VLAR+SL+E F VL I+ LFS RRLLETRG LIIRKLCVLL K+IY++LA VL+ + SDL+F +MV+ LNLILLTA EL LRQ LK S ++ A+ +DR +FASLF CW HNPVAT SLCLLAQAYD+++ LVK+ AEVEITVGFLMQ+DKLVQLLESPIF+ LRLQLL+VD+ +PALLKSLYG+LMLLPQ+
Sbjct: 11 KVLARISLHEVEFQRVLNAIVSLFSSDRRLLETRGSLIIRKLCVLLNAKSIYISLADVLKKTSTSDLEFASIMVQTLNLILLTALELSGLRQVLKNSFQTSASTDDRTVFASLFHCWSHNPVATLSLCLLAQAYDLASSLVKKFAEVEITVGFLMQIDKLVQLLESPIFIQLRLQLLEVDASYHPALLKSLYGLLMLLPQS 211
BLAST of mRNA_H-elongata_contig85835.16164.1 vs. uniprot
Match: A0A7S2G2H9_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G2H9_9STRA) HSP 1 Score: 244 bits (622), Expect = 6.560e-78 Identity = 132/199 (66.33%), Postives = 162/199 (81.41%), Query Frame = 1
Query: 1 QVLARVSLNEEHFNHVLEEILQLFSQKRRLLETRGGLIIRKLCVLLQPKTIYVALASVLQANSDLDFIGVMVEALNLILLTASELEELRQALKLSTKSDAAAEDRDLFASLFACWCHNPVATFSLCLLAQAYDVSAELVKEVAEVEITVGFLMQVDKLVQLLESPIFLHLRLQLLDVDSPSYPALLKSLYGILMLLPQA 597
+VLAR+SL+E F VL I++LF RRLLETRG LIIRKLCVLL K+IY++LA+VL+ DL+F +MV+ LNLILLTA EL LR LK S + A++EDR +F +LF CW HNPVAT SLCLLAQAY +++ LV++ AEVEITVGFLMQ+DKLVQLLESPIF+ LRLQLL+VD+P +PALLKSLYG+LMLLPQ+
Sbjct: 10 KVLARISLHEVEFQRVLNAIVELFLTDRRLLETRGSLIIRKLCVLLNAKSIYISLAAVLRKTPDLEFASIMVQTLNLILLTALELTGLRHILKSSFQESASSEDRAVFTALFNCWSHNPVATLSLCLLAQAYGLASALVQKFAEVEITVGFLMQIDKLVQLLESPIFIQLRLQLLEVDAPYHPALLKSLYGLLMLLPQS 208
BLAST of mRNA_H-elongata_contig85835.16164.1 vs. uniprot
Match: A0A482RXD2_9ARCH (Vac14_Fig4_bd domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RXD2_9ARCH) HSP 1 Score: 230 bits (587), Expect = 3.290e-71 Identity = 123/201 (61.19%), Postives = 160/201 (79.60%), Query Frame = 1
Query: 1 QVLARVSLNEEHFNHVLEEILQLFSQKRRLLETRGGLIIRKLCVLLQPKTIYVALASVLQANSDLDFIGVMVEALNLILLTASELEELRQALKLSTKSDAAAEDRDLFASLFACWCHNPVATFSLCLLAQAYDVSAELVKEVAEVEITVGFLMQVDKLVQLLESPIFLHLRLQLLDVDSPSYPALLKSLYGILMLLPQARS 603
QVLAR+SL+E FN VL I+QLF + R LLETRG L+IRKLC LL +IY+A+A VL +DL+FI +MV+ LNLILLTA EL LR++L+ S +++A +D+ F SLF CW +N VATFSLCLLAQAYD+SA+L+++ AE ++TVGFLMQ+DKLVQLLESPIF+ LRL LL+ DS + LL+SLYG+LMLLPQ+++
Sbjct: 179 QVLARISLDEVQFNRVLNSIVQLFYEDRALLETRGALVIRKLCSLLDSCSIYLAMAKVLNGKTDLEFISLMVQTLNLILLTAPELTPLRKSLQRSFQTNATEKDKTTFQSLFMCWTNNAVATFSLCLLAQAYDISAQLIQKFAEADVTVGFLMQIDKLVQLLESPIFIQLRLHLLETDSAYHTDLLRSLYGLLMLLPQSQA 379
BLAST of mRNA_H-elongata_contig85835.16164.1 vs. uniprot
Match: A0A7S1C269_9STRA (Hypothetical protein (Fragment) n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1C269_9STRA) HSP 1 Score: 235 bits (599), Expect = 1.500e-68 Identity = 126/201 (62.69%), Postives = 156/201 (77.61%), Query Frame = 1
Query: 1 QVLARVSLNEEHFNHVLEEILQLFSQKRRLLETRGGLIIRKLCVLLQPKTIYVALASVL--QANSDLDFIGVMVEALNLILLTASELEELRQALKLSTKSDAAAEDRDLFASLFACWCHNPVATFSLCLLAQAYDVSAELVKEVAEVEITVGFLMQVDKLVQLLESPIFLHLRLQLLDVDSPSYPALLKSLYGILMLLPQA 597
QVL+R+SL + F VL IL LFS RRLLETRG LI+RKLCVLL K++Y+ +A +L N L+FI MV+ LNLILL+A+EL ELR LK S + +A + RD FASLF CWCHNPVATFS CLLAQAYDV+ LVK+ E+E++V FLMQ+DKLVQ++ESPIF+H+RLQLLDV+ P + LLK+LYGILMLLPQ+
Sbjct: 687 QVLSRISLQKHEFQLVLNHILGLFSNDRRLLETRGSLIVRKLCVLLNAKSVYIRMADILGRSKNFSLEFISTMVQTLNLILLSAAELHELRSLLKESFQKNAPFQARDTFASLFPCWCHNPVATFSFCLLAQAYDVAFALVKKFTELEVSVSFLMQIDKLVQIMESPIFVHVRLQLLDVEEPHHSPLLKALYGILMLLPQS 887
BLAST of mRNA_H-elongata_contig85835.16164.1 vs. uniprot
Match: A0A7R9Y8C4_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9Y8C4_9STRA) HSP 1 Score: 226 bits (577), Expect = 3.960e-67 Identity = 119/199 (59.80%), Postives = 156/199 (78.39%), Query Frame = 1
Query: 1 QVLARVSLNEEHFNHVLEEILQLFSQKRRLLETRGGLIIRKLCVLLQPKTIYVALASVLQANSDLDFIGVMVEALNLILLTASELEELRQALKLSTKSDAAAEDRDLFASLFACWCHNPVATFSLCLLAQAYDVSAELVKEVAEVEITVGFLMQVDKLVQLLESPIFLHLRLQLLDVDSPSYPALLKSLYGILMLLPQA 597
+VLA++S E F+ VL ++ LF ++ RLLE RG +IIR+ CV+L K+IY+ LA+VLQ + DL+F+ +++ LNLILLTA EL++LR LK S + +A AE R++F LF CW HNPVAT SLC LAQAYD++ ELVK A+V+ITVGFLMQ DKLVQLLESPIF+ LRLQLL+ D P YP+L+K+LYG+LMLLPQ+
Sbjct: 404 EVLAKISSAEAEFHRVLTSVVDLFGKEPRLLEGRGSVIIRRFCVMLDSKSIYLLLATVLQQHRDLEFVSLLIHTLNLILLTAHELQDLRDILKRSFQPNATAEVRNVFDQLFRCWSHNPVATLSLCFLAQAYDLAFELVKRFAKVDITVGFLMQADKLVQLLESPIFVPLRLQLLETDHPQYPSLVKALYGLLMLLPQS 602
BLAST of mRNA_H-elongata_contig85835.16164.1 vs. uniprot
Match: A0A812QKX0_SYMMI (Vac14 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812QKX0_SYMMI) HSP 1 Score: 216 bits (549), Expect = 5.580e-67 Identity = 119/200 (59.50%), Postives = 152/200 (76.00%), Query Frame = 1
Query: 4 VLARVSLNEEHFNHVLEEILQLFSQKRRLLETRGGLIIRKLCVLLQPKTIYVALASVLQANSDLDFIGVMVEALNLILLTASELEELRQALKLSTKSDAAAEDRDLFASLFACWCHNPVATFSLCLLAQAYDVSAELVKEVAEVEITVGFLMQVDKLVQLLESPIFLHLRLQLLDVDSPSYPALLKSLYGILMLLPQARS 603
V+AR+ +NE+ F VL ++QLF + R LLETRG LIIRKLC LL + IY +LAS++ SDL+F +V+ LNLILLTA EL LR+ L+ + D D+F LF CW HNPVATFSLCLL+Q YD+SA+LV + AEV++TVGFLMQ+DKLVQL+ESP+F+ LRLQLLDVDS + LLKSLYG+LMLLPQ+++
Sbjct: 1 VIARICINEQQFQRVLNALVQLFFEDRPLLETRGALIIRKLCALLDCQKIYRSLASIM-VKSDLEFCSTIVQTLNLILLTAPELSPLRKTLQDCVLQPQS--DEDIFTILFKCWSHNPVATFSLCLLSQTYDLSADLVHKFAEVDVTVGFLMQIDKLVQLIESPVFIRLRLQLLDVDSTFHADLLKSLYGLLMLLPQSQA 197
BLAST of mRNA_H-elongata_contig85835.16164.1 vs. uniprot
Match: F0YQT7_AURAN (Vac14_Fig4_bd domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YQT7_AURAN) HSP 1 Score: 218 bits (555), Expect = 6.950e-66 Identity = 127/226 (56.19%), Postives = 159/226 (70.35%), Query Frame = 1
Query: 1 QVLARVSL-NEEHFNHVLEEILQLFSQKRRLLETRGGLIIRKLCVLLQPKTIYVALASVLQA--------------------------NSDLDFIGVMVEALNLILLTASELEELRQALKLSTKSDAAAEDRDLFASLFACWCHNPVATFSLCLLAQAYDVSAELVKEVAEVEITVGFLMQVDKLVQLLESPIFLHLRLQLLDVDSPSYPALLKSLYGILMLLPQA 597
QVLAR+SL ++ F VL+ ILQLFS+ RRLLE RG LIIR LCVLL K+IY++LA++LQ+ LDF +MV+ LNLILLTA EL+ELR L+ S +S A+ E +F +LF CWCHNPVAT +LCL+AQAY++S+ LV A V+ITVGFLMQVDKLVQLLESP+F+ LRLQLL+V + +P LLKSLYG+LMLLPQ+
Sbjct: 208 QVLARISLLSDAEFKRVLDAILQLFSEDRRLLELRGSLIIRNLCVLLNAKSIYISLATILQSPVHDYVAGSENLALVDVPAIPTIRLSEDQLDFRSIMVQTLNLILLTARELDELRLLLRSSLESGASKEATAVFVTLFGCWCHNPVATLALCLIAQAYELSSALVTLFANVDITVGFLMQVDKLVQLLESPVFIQLRLQLLEVHTSYHPFLLKSLYGLLMLLPQS 433
BLAST of mRNA_H-elongata_contig85835.16164.1 vs. uniprot
Match: W2QV08_PHYPN (Vac14_Fig4_bd domain-containing protein n=6 Tax=Phytophthora parasitica TaxID=4792 RepID=W2QV08_PHYPN) HSP 1 Score: 219 bits (558), Expect = 1.680e-65 Identity = 121/214 (56.54%), Postives = 159/214 (74.30%), Query Frame = 1
Query: 1 QVLARVSLNEEHFNHVLEEILQLFSQKRRLLETRGGLIIRKLCVLLQPKTIYVALASVL-------QANSDLDFIGVMVEALNLILLTASELEELRQALKLSTKSDAAAEDRDLFASLFACWCHNPVATFSLCLLAQAYDVSAELVKEVAEVEITVGFLMQVDKLVQLLESPIFLHLRLQLLDVDSPSYPALLKSLYGILMLLPQARSGVWRVL 621
+VLAR+SLN+ F VL IL LF+Q RRLLE RG +I+RKLCVLL K+IY+ A VL + +D +F VMV+ LNLILLTA+ELE LR L+ S +S A+ +D ++F +LF WCHNP+A FSLCLLAQ+Y +SA L+ + A+++ +VGFLMQ+DKLVQLLESPIF+H+RLQLL++ + L+KSLYG+LMLLPQ S +RVL
Sbjct: 229 EVLARISLNKVEFEKVLNAILLLFAQDRRLLEMRGSMIVRKLCVLLDSKSIYLIFAKVLGTEAVYLDSQADSEFAAVMVQTLNLILLTANELEHLRDILRRSFQSRASEDDVEVFTALFRSWCHNPIAAFSLCLLAQSYSLSAALISKFADIDASVGFLMQIDKLVQLLESPIFIHMRLQLLEIQEDYHTDLVKSLYGLLMLLPQ--SAAFRVL 440 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig85835.16164.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig85835.16164.1 >prot_H-elongata_contig85835.16164.1 ID=prot_H-elongata_contig85835.16164.1|Name=mRNA_H-elongata_contig85835.16164.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=207bp QVLARVSLNEEHFNHVLEEILQLFSQKRRLLETRGGLIIRKLCVLLQPKTback to top mRNA from alignment at H-elongata_contig85835:327..2257- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig85835.16164.1 ID=mRNA_H-elongata_contig85835.16164.1|Name=mRNA_H-elongata_contig85835.16164.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1931bp|location=Sequence derived from alignment at H-elongata_contig85835:327..2257- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig85835:327..2257- >mRNA_H-elongata_contig85835.16164.1 ID=mRNA_H-elongata_contig85835.16164.1|Name=mRNA_H-elongata_contig85835.16164.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1242bp|location=Sequence derived from alignment at H-elongata_contig85835:327..2257- (Himanthalia elongata Himel1 dioecious)back to top |