mRNA_H-elongata_contig84723.16071.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig84723.16071.1 vs. uniprot
Match: D7G1B4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1B4_ECTSI) HSP 1 Score: 125 bits (313), Expect = 4.510e-34 Identity = 56/78 (71.79%), Postives = 64/78 (82.05%), Query Frame = 1
Query: 10 TEQTDVLEIGFGCGYSADRIQELRPRSHTVVEPDPVVLERLRAWAESHRRVTIVEGFWQTALPALGRFDAIFFDDFPV 243
TE++ VLEIG+G GYSADRIQE PRSHT++EPDPVVL RLR WA + V IVEGFWQTAL LG FDA+FFDDFP+
Sbjct: 104 TEESRVLEIGYGIGYSADRIQEFSPRSHTIIEPDPVVLARLRGWAAARPGVRIVEGFWQTALATLGEFDAVFFDDFPL 181
BLAST of mRNA_H-elongata_contig84723.16071.1 vs. uniprot
Match: A0A6H5KGP7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGP7_9PHAE) HSP 1 Score: 125 bits (313), Expect = 1.120e-33 Identity = 56/78 (71.79%), Postives = 64/78 (82.05%), Query Frame = 1
Query: 10 TEQTDVLEIGFGCGYSADRIQELRPRSHTVVEPDPVVLERLRAWAESHRRVTIVEGFWQTALPALGRFDAIFFDDFPV 243
TE++ VLEIG+G GYSADRIQE PRSHT++EPDPVVL RLR WA + V IVEGFWQTAL LG FDA+FFDDFP+
Sbjct: 29 TEESRVLEIGYGIGYSADRIQEFSPRSHTIIEPDPVVLARLRGWAAARPGVRIVEGFWQTALATLGEFDAVFFDDFPL 106
BLAST of mRNA_H-elongata_contig84723.16071.1 vs. uniprot
Match: A0A812X2Q9_9DINO (Gamt protein n=1 Tax=Symbiodinium sp. CCMP2456 TaxID=1519616 RepID=A0A812X2Q9_9DINO) HSP 1 Score: 113 bits (282), Expect = 3.120e-27 Identity = 52/79 (65.82%), Postives = 58/79 (73.42%), Query Frame = 1
Query: 1 LHPTEQTDVLEIGFGCGYSADRIQELRPRSHTVVEPDPVVLERLRAWAESHRRVTIVEGFWQTALPALGRFDAIFFDDF 237
L T TDVLE+GFGCGYSA RIQE +PRSHT++E VVLERL+ WA V IVEG WQ LP LGRFD IFFDD+
Sbjct: 183 LKVTSDTDVLEVGFGCGYSASRIQEFKPRSHTIIECSEVVLERLKHWAADKPNVHIVEGTWQQRLPELGRFDRIFFDDY 261
BLAST of mRNA_H-elongata_contig84723.16071.1 vs. uniprot
Match: A0A1Q9E4R3_SYMMI (Guanidinoacetate N-methyltransferase n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A1Q9E4R3_SYMMI) HSP 1 Score: 113 bits (282), Expect = 3.190e-27 Identity = 52/79 (65.82%), Postives = 58/79 (73.42%), Query Frame = 1
Query: 1 LHPTEQTDVLEIGFGCGYSADRIQELRPRSHTVVEPDPVVLERLRAWAESHRRVTIVEGFWQTALPALGRFDAIFFDDF 237
L T TDVLE+GFGCGYSA RIQE +PRSHT++E VVLERL+ WA V IVEG WQ LP LGRFD IFFDD+
Sbjct: 2309 LKVTSDTDVLEVGFGCGYSASRIQEFKPRSHTIIECSEVVLERLKHWAADKPNVHIVEGTWQQRLPELGRFDRIFFDDY 2387
BLAST of mRNA_H-elongata_contig84723.16071.1 vs. uniprot
Match: A0A812J552_9DINO (Gamt protein n=1 Tax=Symbiodinium necroappetens TaxID=1628268 RepID=A0A812J552_9DINO) HSP 1 Score: 112 bits (281), Expect = 4.340e-27 Identity = 52/79 (65.82%), Postives = 58/79 (73.42%), Query Frame = 1
Query: 1 LHPTEQTDVLEIGFGCGYSADRIQELRPRSHTVVEPDPVVLERLRAWAESHRRVTIVEGFWQTALPALGRFDAIFFDDF 237
L T TDVLE+GFGCGYSA RIQE +PRSHT++E VVLERL+ WA V IVEG WQ LP LGRFD IFFDD+
Sbjct: 2316 LKVTADTDVLEVGFGCGYSASRIQEFKPRSHTIIECSEVVLERLKHWAADKPNVHIVEGTWQQRLPELGRFDRIFFDDY 2394
BLAST of mRNA_H-elongata_contig84723.16071.1 vs. uniprot
Match: A0A485KL38_9STRA (Aste57867_8776 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KL38_9STRA) HSP 1 Score: 107 bits (266), Expect = 2.580e-26 Identity = 48/78 (61.54%), Postives = 57/78 (73.08%), Query Frame = 1
Query: 10 TEQTDVLEIGFGCGYSADRIQELRPRSHTVVEPDPVVLERLRAWAESHRRVTIVEGFWQTALPALGRFDAIFFDDFPV 243
T DVLEIGFG GYSA RIQ PRSHT++E DPV L++L AWA + VTIV G WQ+ L +LG FD IFFDD+P+
Sbjct: 44 TTTCDVLEIGFGLGYSASRIQSFAPRSHTIIECDPVCLKQLEAWAADRKNVTIVAGTWQSMLASLGAFDCIFFDDYPL 121
BLAST of mRNA_H-elongata_contig84723.16071.1 vs. uniprot
Match: A0A7W1U1G4_9BACT (Class I SAM-dependent methyltransferase n=1 Tax=Parachlamydiaceae bacterium TaxID=2052176 RepID=A0A7W1U1G4_9BACT) HSP 1 Score: 107 bits (266), Expect = 3.630e-26 Identity = 50/78 (64.10%), Postives = 63/78 (80.77%), Query Frame = 1
Query: 22 DVLEIGFGCGYSADRIQELRPRSHTVVEPDPVVLERLRAWAESHRRVTIVEGFWQTALPALGRFDAIFFDDF-PVSMA 252
DVLEIGFG GYSA+ IQ+ +P+SHT+VE DPVVLE+ +AWA++H V IVEG WQ L +LG+FD IFFDD+ P+S A
Sbjct: 47 DVLEIGFGLGYSANCIQKFKPKSHTIVECDPVVLEKAKAWAKTHPGVKIVEGTWQEKLDSLGKFDTIFFDDYSPLSNA 124
BLAST of mRNA_H-elongata_contig84723.16071.1 vs. uniprot
Match: A0A812Q0V8_9DINO (Gamt-a protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812Q0V8_9DINO) HSP 1 Score: 108 bits (271), Expect = 7.580e-26 Identity = 50/79 (63.29%), Postives = 57/79 (72.15%), Query Frame = 1
Query: 1 LHPTEQTDVLEIGFGCGYSADRIQELRPRSHTVVEPDPVVLERLRAWAESHRRVTIVEGFWQTALPALGRFDAIFFDDF 237
L TDVLE+GFGCGYSA RIQE +PRSHT++E VVLERL+ WA V IVEG WQ LP LG+FD IFFDD+
Sbjct: 362 LGVNSDTDVLEVGFGCGYSASRIQEYKPRSHTIIECSEVVLERLKHWAADKPNVHIVEGTWQKRLPELGQFDRIFFDDY 440
BLAST of mRNA_H-elongata_contig84723.16071.1 vs. uniprot
Match: UPI001BBE6851 (Uncharacterized protein n=1 Tax=Simkania sp. TaxID=34094 RepID=UPI001BBE6851) HSP 1 Score: 105 bits (263), Expect = 8.720e-26 Identity = 45/77 (58.44%), Postives = 58/77 (75.32%), Query Frame = 1
Query: 22 DVLEIGFGCGYSADRIQELRPRSHTVVEPDPVVLERLRAWAESHRRVTIVEGFWQTALPALGRFDAIFFDDFPVSMA 252
DVLE+GFG GYS+ RIQ P++HT++E DP V R R WA+ + +TI+E WQ ALPALGRFDA+FFDD+P+ A
Sbjct: 46 DVLEVGFGLGYSSTRIQYYHPKTHTIIEYDPTVAARAREWAKQYVGITIIEKTWQEALPALGRFDAVFFDDYPLEAA 122
BLAST of mRNA_H-elongata_contig84723.16071.1 vs. uniprot
Match: A0A7S0NTQ9_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0NTQ9_9EUKA) HSP 1 Score: 104 bits (260), Expect = 2.130e-25 Identity = 50/86 (58.14%), Postives = 55/86 (63.95%), Query Frame = 1
Query: 1 LHPTEQTDVLEIGFGCGYSADRIQELRPRSHTVVEPDPVVLERLRAWAESHRRVTIVEGFWQTALPALGRFDAIFFDDFPVSMASN 258
L T DVLE+GFGC YSADR+Q PRSHT+VE VLERLR WA V +VEG WQ LP LG FD IFFDDF + S
Sbjct: 27 LRITTDCDVLEVGFGCAYSADRVQRASPRSHTIVECAAPVLERLREWARDKPSVRVVEGTWQARLPELGDFDRIFFDDFGAAGMSE 112 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig84723.16071.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig84723.16071.1 >prot_H-elongata_contig84723.16071.1 ID=prot_H-elongata_contig84723.16071.1|Name=mRNA_H-elongata_contig84723.16071.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=88bp LHPTEQTDVLEIGFGCGYSADRIQELRPRSHTVVEPDPVVLERLRAWAESback to top mRNA from alignment at H-elongata_contig84723:666..929+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig84723.16071.1 ID=mRNA_H-elongata_contig84723.16071.1|Name=mRNA_H-elongata_contig84723.16071.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=264bp|location=Sequence derived from alignment at H-elongata_contig84723:666..929+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig84723:666..929+ >mRNA_H-elongata_contig84723.16071.1 ID=mRNA_H-elongata_contig84723.16071.1|Name=mRNA_H-elongata_contig84723.16071.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=528bp|location=Sequence derived from alignment at H-elongata_contig84723:666..929+ (Himanthalia elongata Himel1 dioecious)back to top |