mRNA_H-elongata_contig84405.16055.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig84405.16055.1 vs. uniprot
Match: A0A6H5JAK7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAK7_9PHAE) HSP 1 Score: 233 bits (593), Expect = 1.400e-73 Identity = 111/157 (70.70%), Postives = 127/157 (80.89%), Query Frame = 1
Query: 1 YKGPMDCAMKLVREHGARSLYRGASVTVIRDTPAMGLYFASYEATKKWMEKRWCFSEQASSCLAGGLAGALSWAVIYPFDVVKSIQQAATDPLDPSTRSVYARFRGVYNSVGGGVPGARRLFRGLGTTLVRAVPVNAAIFPTYEWTVRVLNKAFPPS 471
Y+GP+DCAM + G R L+RG+ T IRDTPAMGLYFASYEA K +E RW F EQASS AGGLAGALSW V YPFDVVKS+QQAA DP+DP+TRS+ A FR VYN+ GGG+PG R FRG+ TT+VRAVPVNAAIFPT+EWTV+VLNKAFP S
Sbjct: 188 YRGPVDCAMSIFNTQGVRGLFRGSPATAIRDTPAMGLYFASYEAVKDRLESRWGFGEQASSFWAGGLAGALSWFVSYPFDVVKSVQQAAADPMDPNTRSMTACFRHVYNTAGGGIPGVSRFFRGVSTTVVRAVPVNAAIFPTFEWTVKVLNKAFPSS 344
BLAST of mRNA_H-elongata_contig84405.16055.1 vs. uniprot
Match: K0RM31_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RM31_THAOC) HSP 1 Score: 126 bits (317), Expect = 3.240e-32 Identity = 75/164 (45.73%), Postives = 99/164 (60.37%), Query Frame = 1
Query: 1 YKGPMDCAMKLVREHGA-RSLYRGASVTVIRDTPAMGLYFASYEATKKWMEKRWCFSEQA-----------SSCLAGGLAGALSWAVIYPFDVVKSIQQAATDPLDPST-RSVYARFRGVYNSVGGGVPGARRLFRGLGTTLVRAVPVNAAIFPTYEWTVRVLN 453
YKGP+D A+ +VR++G R L+RG VT+ R+TPA GLYFA+Y+ K +E E++ +S LAGGL+GAL+W V+YPFDV+KS Q T PL+ + RS+ + G G +FRGLG TLVRA PVNA IFP YEW + L
Sbjct: 192 YKGPVDAAVSIVRQYGVTRGLFRGMGVTLWRETPAFGLYFATYDTIKDRVESFLREQEESHPIPAHLHAWSASALAGGLSGALTWFVVYPFDVIKSRIQ--TSPLEKNMQRSMLTTASDIIREHGAG-----HMFRGLGVTLVRAFPVNAIIFPVYEWVLLQLG 348
BLAST of mRNA_H-elongata_contig84405.16055.1 vs. uniprot
Match: A0A835ZAK8_9STRA (Solute carrier family 25 member 45-like protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAK8_9STRA) HSP 1 Score: 121 bits (304), Expect = 5.970e-31 Identity = 69/144 (47.92%), Postives = 85/144 (59.03%), Query Frame = 1
Query: 1 YKGPMDCAMKLVREHGARSLYRGASVTVIRDTPAMGLYFASYEATKKWMEKRWCFSEQASSCLAGGLAGALSWAVIYPFDVVKSIQQAATDPLDPSTRSVYARFRGVYNSVGGGVPGARRLFRGLGTTLVRAVPVNAAIFPTYE 432
YKG +DCA +LVR G RSL G + TV R+ PA G+YF+ YE K ++++ E S+ AGG+AG SW I P DV+KS QQA D S+ A RG+Y G R FRGLGT +VRA PVNA IFP YE
Sbjct: 136 YKGAIDCATQLVRTQGLRSLLAGGTATVWREVPAYGIYFSVYEQVKALLKEKGA-KEGVSAFAAGGIAGCSSWFAIAPLDVIKSRQQAMQDWRSKEASSLVACARGMYRE-----GGHRIFFRGLGTIMVRAFPVNAVIFPIYE 273
BLAST of mRNA_H-elongata_contig84405.16055.1 vs. uniprot
Match: B8C2E7_THAPS (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C2E7_THAPS) HSP 1 Score: 120 bits (301), Expect = 2.310e-30 Identity = 72/165 (43.64%), Postives = 102/165 (61.82%), Query Frame = 1
Query: 1 YKGPMDCAMKLVREHGA-RSLYRGASVTVIRDTPAMGLYFASYEATKKWMEKRWCFSEQ-----------ASSCLAGGLAGALSWAVIYPFDVVKSIQQAATDPLDPSTRSVYARFRGVYNSVGGGV--PGARRLFRGLGTTLVRAVPVNAAIFPTYEWTVRVLN 453
YKGP+D + +V+++G R LYRG VT+ R+TPA G+YFA+Y++ K +E ++ A+S LAGG++GAL+WA+IYPFDV+KS Q T PL+ + +G++ V G + +FRGLG TLVRA PVNA IFP YE+T+ L
Sbjct: 132 YKGPVDAGVSIVKQYGLFRGLYRGMGVTLWRETPAFGMYFATYDSIKARVETLLEDKDEHHPIPSHAHAWAASALAGGISGALTWAIIYPFDVIKSRMQ--TGPLERHLQ------KGMWTVAKDIVVQQGWKYMFRGLGVTLVRAFPVNAIIFPVYEFTLMQLG 288
BLAST of mRNA_H-elongata_contig84405.16055.1 vs. uniprot
Match: D8LK82_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK82_ECTSI) HSP 1 Score: 113 bits (283), Expect = 2.210e-29 Identity = 53/73 (72.60%), Postives = 62/73 (84.93%), Query Frame = 1
Query: 253 IQQAATDPLDPSTRSVYARFRGVYNSVGGGVPGARRLFRGLGTTLVRAVPVNAAIFPTYEWTVRVLNKAFPPS 471
+ QAA DP+DP+TRS+ A FR VY + GGGVPG RR FRG+ TT+VRAVPVNAAIFPT+EWTV+VLNKAFP S
Sbjct: 62 VGQAAADPMDPNTRSMTACFRHVYKTAGGGVPGVRRFFRGVSTTVVRAVPVNAAIFPTFEWTVKVLNKAFPSS 134
BLAST of mRNA_H-elongata_contig84405.16055.1 vs. uniprot
Match: A0A7S4HIS7_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4HIS7_9STRA) HSP 1 Score: 116 bits (290), Expect = 6.020e-28 Identity = 69/175 (39.43%), Postives = 95/175 (54.29%), Query Frame = 1
Query: 1 YKGPMDCAMKLVREHGARSLYRGASVTVIRDTPAMGLYFASYEATKKWMEKRWCFSEQ---------------------ASSCLAGGLAGALSWAVIYPFDVVKS-IQQAATDPLDPSTRSVYARFRGVYNSVGGGVPGARRLFRGLGTTLVRAVPVNAAIFPTYEWTVRVLNKA 459
Y+GP+D K+V HG R LYRG T +R+ PA GLYFA+Y+ K + + + ++ A+S +AGG++G+ +WA+IYP DV+KS IQ A D PS S+ R + G R +FRGLG TL RA PVN IFP YE+T+ L +A
Sbjct: 219 YRGPLDAVNKIVSGHGVRGLYRGWWCTTVREVPAFGLYFATYDNIKGRINRMFEKDKEDGNGSGEAGNRRGGTHHSHTWAASAVAGGISGSFTWAIIYPVDVIKSRIQTAPLDCEAPSKISMLGVGRDIVRE-----NGWRYMFRGLGVTLARAFPVNGIIFPVYEFTLMKLTQA 388
BLAST of mRNA_H-elongata_contig84405.16055.1 vs. uniprot
Match: A0A1I7Z7D7_9BILA (Uncharacterized protein n=1 Tax=Steinernema glaseri TaxID=37863 RepID=A0A1I7Z7D7_9BILA) HSP 1 Score: 114 bits (284), Expect = 1.740e-27 Identity = 67/152 (44.08%), Postives = 87/152 (57.24%), Query Frame = 1
Query: 1 YKGPMDCAMKLVREHGARSLYRGASVTVIRDTPAMGLYFASYEATKKWMEKRWCFSEQASSCL--AGGLAGALSWAVIYPFDVVKSIQQAATDPLDPSTRSVYARFRGVYNSVGGGVPGARRLFRGLGTTLVRAVPVNAAIFPTYEWTVRVL 450
Y+ P CA +LV +HG+R+L+RG T++RD PA+G+YFASYE + + + S+ L AGG AG LSW YP DV+K+ QA S RS R Y G R +RGLG+TL+RA P NAA F T EWT R+L
Sbjct: 138 YRSPYHCARQLVDKHGSRTLFRGMMATIVRDCPAIGIYFASYEWIARKLSRDGTMEALTSAQLLTAGGAAGMLSWLFNYPSDVIKTRFQACD-----SYRSYGDVIRRTYAE-----NGVRTFYRGLGSTLLRAFPTNAATFFTVEWTYRIL 279
BLAST of mRNA_H-elongata_contig84405.16055.1 vs. uniprot
Match: A0A4V5ZXV3_STECR (Uncharacterized protein n=1 Tax=Steinernema carpocapsae TaxID=34508 RepID=A0A4V5ZXV3_STECR) HSP 1 Score: 111 bits (277), Expect = 1.570e-26 Identity = 69/152 (45.39%), Postives = 83/152 (54.61%), Query Frame = 1
Query: 1 YKGPMDCAMKLVREHGARSLYRGASVTVIRDTPAMGLYFASYEATKKWMEKRWCFSEQASSCL--AGGLAGALSWAVIYPFDVVKSIQQAATDPLDPSTRSVYARFRGVYNSVGGGVPGARRLFRGLGTTLVRAVPVNAAIFPTYEWTVRVL 450
Y+ P CA LV +HG R L+RG TVIRD PA G+YFASYE + + K S+ L AGG AG LSW YP DV+K+ QA S +S R Y G R +RGLG+TL+RA P NAA F T EWT R+L
Sbjct: 130 YRSPYHCAKTLVDQHGKRFLFRGMLATVIRDCPAFGIYFASYEWMARKLSKDGTMESLTSAQLLFAGGAAGMLSWLSNYPTDVIKTRFQACD-----SYKSYGDVIRRTYAE-----NGIRTFYRGLGSTLLRAFPTNAATFFTVEWTYRIL 271
BLAST of mRNA_H-elongata_contig84405.16055.1 vs. uniprot
Match: A0A4V1J523_9FUNG (Mitochondrial carrier domain-containing protein (Fragment) n=1 Tax=Dimargaris cristalligena TaxID=215637 RepID=A0A4V1J523_9FUNG) HSP 1 Score: 110 bits (275), Expect = 1.980e-26 Identity = 66/165 (40.00%), Postives = 89/165 (53.94%), Query Frame = 1
Query: 1 YKGPMDCAMKLVREHGARSLYRGASVTVIRDTPAMGLYFASYEATKKWMEKRWCFSEQASS-------------CLAGGLAGALSWAVIYPFDVVKSIQQAATDPLDPSTRSVYARFRGVYNSVGGGVPGARRLF-RGLGTTLVRAVPVNAAIFPTYEWTVRVLN 453
Y G +C ++ RE G R LYRG S+T IRD P+ G YF +YE TK+ + +R A+ CLAGG+AG +W YP D+VKS Q+ +PS + A FR ++ G PG R+F RG G TL RA P NAA F YEW ++ ++
Sbjct: 145 YTGVFNCGVRTFREQGLRGLYRGFSITFIRDVPSFGCYFGAYELTKQLLARRRSPETFATPGAGPHYTNTGLELCLAGGVAGIAAWLFCYPQDIVKSRMQS-----NPSYPNTLACFRILWKEAQG--PGNWRVFFRGFGPTLARAFPANAATFVAYEWALKHMS 302
BLAST of mRNA_H-elongata_contig84405.16055.1 vs. uniprot
Match: A0A485L7M8_9STRA (Aste57867_16706 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L7M8_9STRA) HSP 1 Score: 110 bits (274), Expect = 2.480e-26 Identity = 60/153 (39.22%), Postives = 86/153 (56.21%), Query Frame = 1
Query: 1 YKGPMDCAMKLVREHG--ARSLYRGASVTVIRDTPAMGLYFASYEATKKWMEKRWCFSEQASSCLAGGLAGALSWAVIYPFDVVKSIQQAATDPLDPSTRSVYARFRGVYNSVGGGVPGARRLFRGLGTTLVRAVPVNAAIFPTYEWTVRVLN 453
+ P+DC M+ + HG A+ L++G VT++RDT + G+YF YE ++W S +AGGLAG +SW ++YP DVVKS+ Q R + + R + + V GA +GLGTT++RA PVNA F YEWTV L+
Sbjct: 154 FANPLDC-MRYLSHHGGGAKGLFQGLRVTLLRDTGSYGVYFGVYEGMRRWFAS----DSTPSLLVAGGLAGVVSWTIVYPIDVVKSVIQTMPPTATADERRILVQARRLVD-----VHGASIFTKGLGTTMLRAFPVNAVTFYFYEWTVAALS 296 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig84405.16055.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig84405.16055.1 >prot_H-elongata_contig84405.16055.1 ID=prot_H-elongata_contig84405.16055.1|Name=mRNA_H-elongata_contig84405.16055.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=154bp MDCAMKLVREHGARSLYRGASVTVIRDTPAMGLYFASYEATKKWMEKRWCback to top mRNA from alignment at H-elongata_contig84405:348..1043+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig84405.16055.1 ID=mRNA_H-elongata_contig84405.16055.1|Name=mRNA_H-elongata_contig84405.16055.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=696bp|location=Sequence derived from alignment at H-elongata_contig84405:348..1043+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig84405:348..1043+ >mRNA_H-elongata_contig84405.16055.1 ID=mRNA_H-elongata_contig84405.16055.1|Name=mRNA_H-elongata_contig84405.16055.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=924bp|location=Sequence derived from alignment at H-elongata_contig84405:348..1043+ (Himanthalia elongata Himel1 dioecious)back to top |