mRNA_H-elongata_contig8315.15950.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig8315.15950.1 vs. uniprot
Match: A0A6V1P3W9_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1P3W9_HETAK) HSP 1 Score: 224 bits (571), Expect = 1.090e-67 Identity = 123/296 (41.55%), Postives = 175/296 (59.12%), Query Frame = 1
Query: 7 VIISVLLQFLNKIDRQDLKPAVWKGAFTGLAGAIAIGICFIIAYYETSEQFFTGRTEYIVEAILMITASVIVTILSASMLKIAHMREKWERKLQEGMIKAEQQGSDLKYSYMFWLPLIAVLREGIETVIFLAGTSSSYPAEAIPIPGILGVVVGLAIGWFIFRAGREASLKNLLTVSTVILLFIAAGLFSYGVHELQELELFGTWDGERNHMVRAGTEGDPSYRSRQVI-WPQAASVLVACGNTASWNICDVADNDHEFWGLMRALFGYTCKPTPVEMIAYVLYWVMAITYLCYKL 891
+I+SVLLQ+L K R +LK VW G GLA A+ +G+ F+ +Y + FTG E + E +LM+ A VI+T+L SM+K+A +K+ RK+ E IK +G + + WLPL ++LREGIE++IFL G +SY A AIPIPGILG+VVG + W +++AG +L+N TV LLFIAAGL SYG+HE+QE FG W+ + D + +R + W A S HEFW ++RALFG+ P+PVE I+Y YWV+ + ++ +KL
Sbjct: 59 IIVSVLLQYLEKTQRPELKRDVWIGTGIGLAVAVVLGVIFVAVFYIAKDNIFTGSAEALFEGVLMLAACVIITVLGVSMIKMAKKMDKYRRKM-ELKIKDVMEGRERHG--LIWLPLTSILREGIESIIFLFGVGASYEASAIPIPGILGMVVGALVSWGLYKAGDRLNLQNFFYACTVFLLFIAAGLCSYGIHEIQEAGAFGCWECD-----------DRPWGNRPMYDWGDAFSY-----------------KKHEFWAIVRALFGFRGDPSPVEFISYWCYWVVCLAFVAFKL 323
BLAST of mRNA_H-elongata_contig8315.15950.1 vs. uniprot
Match: A0A835YPH3_9STRA (Iron permease FTR1 family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPH3_9STRA) HSP 1 Score: 201 bits (512), Expect = 1.760e-60 Identity = 101/219 (46.12%), Postives = 139/219 (63.47%), Query Frame = 1
Query: 241 MLKIAHMREKWERKLQEGMIKAEQQGS--DLKYSYMFWLPLIAVLREGIETVIFLAGTSSSYPAEAIPIPGILGVVVGLAIGWFIFRAGREASLKNLLTVSTVILLFIAAGLFSYGVHELQELELFGTWDGERNHMVRAGTEGDPSYRSRQVIWPQAASVLVACGNTASWNICDVADNDHEFWGLMRALFGYTCKPTPVEMIAYVLYWVMAITYLCYKL 891
ML + RE WE KLQ + KA+++G+ ++ S MFW+P IAVLREGIETVIFLAG + YP ++IPIPGI+G++ GLA GW +F AG + +++ L STV+LLFI+AGL YG HE QE +FGT++ + + G +P W+ICD ND + W + RALFGYTC P+P E++ Y +YWV+A+TYLC+KL
Sbjct: 1 MLNLNKNREAWEAKLQAQLEKADREGAVTSIRKSQMFWIPFIAVLREGIETVIFLAGVGAGYPLKSIPIPGIIGLITGLAAGWLLFTAGGKCTMRAFLICSTVLLLFISAGLAMYGAHEFQEAGMFGTYENDEGEVQ--GVMNEPV-----------------------WDICDCCANDAKGWDIFRALFGYTCAPSPWEILVYCVYWVIALTYLCFKL 194
BLAST of mRNA_H-elongata_contig8315.15950.1 vs. uniprot
Match: A0A1Y1HJN3_KLENI (Similar to high-affinity iron permease n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HJN3_KLENI) HSP 1 Score: 197 bits (501), Expect = 2.130e-57 Identity = 114/302 (37.75%), Postives = 173/302 (57.28%), Query Frame = 1
Query: 1 AVVIISVLLQFLNKIDRQDLKPAVWKGAFTGLAGAIAIGICFIIAYYETSEQFFTGRTEYIVEAILMITASVIVTILSASMLKIAHMREKWERKLQEGMIKAEQQGSDLKYSY-MFWLPLIAVLREGIETVIFLAGTSSSYPAEAIPIPGILGVVVGLAIGWFIFRAGREASLKNLLTVSTVILLFIAAGLFSYGVHELQELELFGTWDGERNHMVRAGTEGDPSYRSRQVIWPQAASVLVACGNTASWNICDVADNDHE-FWGLMRALFGYTCKPTPVEMIAYVLYWVMAITYLCYKLHKG 900
A VI++VLLQ++ K + LK VW GA GL +I + YY + F G+ E I E ++ + ASV++TIL+ MLK+ +++KW RKL++ ++A + + +Y +F + AVLREGIE+V+FLAG P +AIP+ GI+G ++G+++G+ +F + LK +STVILLF+AAGL G+HE QE FG + GE + + + + + SV N WNICD ND + F+ L +AL GYTC PT + +I Y++YW+ I + YK G
Sbjct: 22 AAVILAVLLQYVAKTGKTHLKKQVWFGAGLGLLLSIIFAVXXXXIYYTLDNEVFEGKGEQIFEGVISVIASVMITILAFGMLKMMALQDKWNRKLKKSALEALEGKTAFTITYALFLIAFTAVLREGIESVLFLAGVGVDTPWKAIPLGGIVGALLGVSLGYVLFFGLKPVQLKWFFVISTVILLFLAAGLMMTGMHEFQEAGAFGYY-GEEXXXXXXXXXXALAPSALEEMEEEEKSV--PWHNKPLWNICDCCSNDDQGFFELAKALVGYTCDPTFIHVITYIIYWIFVIGIVVYKASTG 320
BLAST of mRNA_H-elongata_contig8315.15950.1 vs. uniprot
Match: A0A1Y1IRQ1_KLENI (Similar to high-affinity iron permease n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IRQ1_KLENI) HSP 1 Score: 197 bits (500), Expect = 3.620e-57 Identity = 113/304 (37.17%), Postives = 174/304 (57.24%), Query Frame = 1
Query: 1 AVVIISVLLQFLNKIDRQDLKPAVWKGAFTGLAGAIAIGICFIIAYYETSEQFFTGRTEYIVEAILMITASVIVTILSASMLKIAHMREKWERKLQEGMIKAEQQGSD---LKYSYMFWLPLIAVLREGIETVIFLAGTSSSYPAEAIPIPGILGVVVGLAIGWFIFRAGREASLKNLLTVSTVILLFIAAGLFSYGVHELQELELFGTWDGERNHMVRAGTEGDPSYRSRQVIWPQAASVLVACGNTASWNICDVADN-DHEFWGLMRALFGYTCKPTPVEMIAYVLYWVMAITYLCYKLHKG 900
A VI++VLLQ++ K + L+ VW GA G ++ + FII YY + FTG+ E I E I+ I ASV++T+L+ MLK+ +++KW+RKL+ ++ + G + Y+ +F + AVLREGIE+V+FLAG + P AIP+ G +G V+G+ +G+ +F + L+ +STVILLFIAAGLF G E QE FG + E + G+E + + + V N WNIC D+ D F+ L RAL GY C PT ++++AY+ YW++ + + K+ +G
Sbjct: 22 AAVILAVLLQYVTKTGKLHLRKQVWLGAGLGFLLSLVFAVVFIIIYYTLDHEVFTGKGEAIFEGIVCIIASVMITVLAFGMLKMMELQKKWDRKLKAATLEVVETGKRKFVVTYA-LFIIAFTAVLREGIESVLFLAGVGVNTPWRAIPLGGAVGAVLGVCLGYVLFFGLKPVQLRWFFYISTVILLFIAAGLFMSGFGEFQEAGAFG-YSAEEDEDXXGGSEDNAIAPGPSPV--EEEDRFVPWQNRPLWNICKCCDDEDQGFFELARALVGYVCDPTIIQVVAYIAYWLLVLVIVAVKVKRG 321
BLAST of mRNA_H-elongata_contig8315.15950.1 vs. uniprot
Match: A0A835YQM0_9STRA (Iron permease FTR1 family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQM0_9STRA) HSP 1 Score: 193 bits (490), Expect = 4.050e-57 Identity = 97/220 (44.09%), Postives = 135/220 (61.36%), Query Frame = 1
Query: 241 MLKIAHMREKWERKLQEGMIKAEQQGS---DLKYSYMFWLPLIAVLREGIETVIFLAGTSSSYPAEAIPIPGILGVVVGLAIGWFIFRAGREASLKNLLTVSTVILLFIAAGLFSYGVHELQELELFGTWDGERNHMVRAGTEGDPSYRSRQVIWPQAASVLVACGNTASWNICDVADNDHEFWGLMRALFGYTCKPTPVEMIAYVLYWVMAITYLCYKL 891
MLK++ +E WE KL+ + KA+ +G+ L+ S MFW+P I+VLREGIETVIFLAG + YP ++IPIPGI+G++ GL GW +F AG + S+K L STV+LLFI+ GL YG HE QE +FG ++ + EG+ + N WNICD + + W + LFGYTC P+P E++ Y LYWV+A+TYLC+K+
Sbjct: 1 MLKMSKFQEAWEAKLRAQLEKADAEGTTGTSLRKSQMFWIPFISVLREGIETVIFLAGVGAGYPLKSIPIPGIVGLITGLIAGWLLFAAGGKCSMKGFLVCSTVLLLFISGGLALYGAHEFQEAGMFGAYEND---------EGE----------------IQGAMNEPVWNICDCCNQADKGWDVFNRLFGYTCAPSPWEILVYCLYWVLALTYLCFKI 195
BLAST of mRNA_H-elongata_contig8315.15950.1 vs. uniprot
Match: A0A1Y1IM50_KLENI (Similar to high-affinity iron permease n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IM50_KLENI) HSP 1 Score: 185 bits (470), Expect = 1.060e-52 Identity = 112/308 (36.36%), Postives = 167/308 (54.22%), Query Frame = 1
Query: 1 AVVIISVLLQFLNKIDRQDLKPAVWKGAFTGLAGAIAIGICFIIAYYETSEQFFTGRTEYIVEAILMITASVIVTILSASMLKIAHMREKWERKLQEGMIKAEQ--QGSDLKYSYMFWLPLIAVLREGIETVIFLAGTSSSYPAEAIPIPGILGVVVGLAIGWFIFRAGREASLKNLLTVSTVILLFIAAGLFSYGVHELQELELFGTW-----DGERNHMVRAGTEGDPSYRSRQVIWPQAASVLVACGNTASWNICDV-ADNDHEFWGLMRALFGYTCKPTPVEMIAYVLYWVMAITYLCYKLHKG 900
A VI++VLLQ++ K + LK VW GA GL +I YY ++ FTG+ E I I+ + ASV++TIL+ MLK+ ++EKW RKL++ ++A + Q +Y+ +F + AV+REGIE V+FLAG P +AIP+ G +G +G+ G+F+F + +K +STVIL+F+AAGL G+HE Q FG + +GE R++ W N A WNIC +D D F+ L RAL GY C PT +++I Y+ YW++ I +K +G
Sbjct: 22 AAVIMAVLLQYVAKTGKTYLKKQVWIGAGLGLLLSIXXXXXXXXXYYTLDKEVFTGKGEQIFSRIISVIASVMITILAFGMLKMFALQEKWNRKLKKSALEALEGKQAFTTRYA-LFIIAFTAVIREGIEAVLFLAGVGVGTPWKAIPLGGFVGAALGVFFGYFLFFGLKPVQMKWFFYISTVILMFLAAGLMMTGIHEFQLAGAFGYFPPESDEGESAPXXXXXXXXXXXXXXRELSWH----------NKALWNICSCCSDADQGFFELARALVGYVCDPTFIQVITYICYWIVVIGVFVFKARRG 318
BLAST of mRNA_H-elongata_contig8315.15950.1 vs. uniprot
Match: E1ZPR3_CHLVA (Uncharacterized protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZPR3_CHLVA) HSP 1 Score: 176 bits (445), Expect = 2.240e-48 Identity = 114/302 (37.75%), Postives = 170/302 (56.29%), Query Frame = 1
Query: 1 AVVIISVLLQFLNKIDRQDLKPAVWKGAFTGLAGAIAIGICFIIAYYETSEQFFTGRTEYIVEAILMITASVIVTILSASMLKIAHMREKWERKLQEGMIKAEQQGSDLKYSY-MFWLPLIAVLREGIETVIFLAGTSSSYPAEAIPIPGILGVVVGLAIGWFIFRAGREA-SLKNLLTVSTVILLFIAAGLFSYGVHELQELELFGTWDGERNHMVRAGTEGDPSYRSRQVIWPQAASVLVACGNTASWNICDVADNDHEFWGLMRALFGYTCKPTPVEMIAYVLYWVMAITYLCYKLHKG 900
A V++SVLLQ + K+ + LK VW GA G+A +I IGI FI+ +Y E+ FTG ++ I + ++ AS+++T+++ MLK ++ KW RKL EG + ++Q + Y + + L L A LREGIE+V+FL G S ++I IPGI+GV++GL +G IF GR SLK +S +LL IAAGL + GV L LFG E P + +++W + C++ ND FW L+RALFGYT +PT + ++ Y+LYW++ I + YK G
Sbjct: 19 AAVVVSVLLQLVEKM-KLPLKKHVWIGALLGVAISIVIGIIFIVLFYVAGEKIFTGNSQSIFKGVVSWIASLLITVVAFHMLKFYNVERKWRRKL-EGAMDGDRQAAARSYRWSILLLALSATLREGIESVLFLTGVSQGDGVKSIIIPGIVGVILGLGVGMLIFYTGRTIKSLKWFFILSCGLLLLIAAGLVASGVVFLTSAGLFGN---------TFPYEDAPWFN--KILWDTSGC-------------CNMYTND--FWSLVRALFGYTDQPTALNLLYYLLYWMVVIFVMAYKWWHG 292
BLAST of mRNA_H-elongata_contig8315.15950.1 vs. uniprot
Match: A0A2P6VGS2_9CHLO (Plasma membrane iron permease n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VGS2_9CHLO) HSP 1 Score: 181 bits (460), Expect = 6.140e-48 Identity = 113/306 (36.93%), Postives = 171/306 (55.88%), Query Frame = 1
Query: 1 AVVIISVLLQFLNKIDRQDLKPAVWKGAFTGLAGAIAIGICFIIAYYETSEQFFTGRTEYIVEAILMITASVIVTILSASMLKIAHMREKWERKLQEGMIKAEQQGSDLKYSY-MFWLPLIAVLREGIETVIFLAGTSSSYPAEAIPIPGILGVVVGLAIGWFIFRAGREA-SLKNLLTVSTVILLFIAAGLFSYGVHELQELELFGTWDGERNHMVRAGTEGDPSYRSRQ----VIWPQAASVLVACGNTASWNICDVADNDHEFWGLMRALFGYTCKPTPVEMIAYVLYWVMAITYLCYKLHKG 900
A V++SVLLQ + K+ LK VW GA G+A +I IGI FI+ +Y +E+ FTG ++ I + ++ A +++T+++ MLK ++ KW RKL EG + A+++ + Y + + L A LREGIE+V+FL G S +AI IPGI+GV++GL +G IF GR SLK +S+ +LLFIAAGL + GV LFGT Y R+ ++W + C++ N EFW L+RALFGYT +PT + ++ Y+LYW++ + + +K H G
Sbjct: 19 AAVVVSVLLQLVEKMRMPQLKKHVWFGALAGVAVSIVIGIVFIVLFYVANEKLFTGDSQAIFKGVISWVACLLITVVAFHMLKFYNVERKWRRKL-EGALDADREIAARSYRWSIMLLAFSATLREGIESVLFLTGVSQGDGIKAIIIPGIVGVILGLGVGMLIFYTGRTIKSLKWFFILSSGLLLFIAAGLVAQGVVFFTSAGLFGTTF---------------PYEEREWYNHILWDTSGC-------------CNMYTN--EFWSLVRALFGYTDQPTGLNLMYYLLYWIVVLASMAWKAHTG 293
BLAST of mRNA_H-elongata_contig8315.15950.1 vs. uniprot
Match: Q0CE53_ASPTN (Plasma membrane iron permease n=2 Tax=Aspergillus terreus TaxID=33178 RepID=Q0CE53_ASPTN) HSP 1 Score: 160 bits (404), Expect = 9.060e-43 Identity = 109/310 (35.16%), Postives = 160/310 (51.61%), Query Frame = 1
Query: 7 VIISVLLQFLNKI--------DRQDLKPAVWKGAFTGLAGAIAIGICFIIAYYETSEQFFTGRTEYIVEAILMITASVIVTILSASMLKIAHMREKWERKL----QEGMIKAEQQGSDLKY----SYMFWLPLIAVLREGIETVIFLAGTSSSYPAEAIPIPGILGVVVGLAIGWFIFRAGREASLKNLLTVSTVILLFIAAGLFSYGVHELQELELFGTWDGERNHMV---RAGTEGDP-SYRSRQVIWPQAASVLVACGNTASWNICDVADNDHEFWGLMRALFGYTCKPTPVEMIAYVLYWVMAITY 876
+I+SVLL FL++ R+ L VW G GL + IG I A+Y + F TE + E I + AS+I+TI+ A++L++ +REKW KL +E + + K+ +MF LP I VLREG+E V+F+ G S S+PA A P+P I G++ G+A+G+ I+R G + SL+ L +ST +L +AAGL S GV L+ TW NH++ A T P SY RQ +W N C N WG+ A+ G+T T +I+Y LYW++ I +
Sbjct: 23 IIVSVLLSFLHQTLGADSDAATRKKLVKQVWWGVAIGLVICLIIGGGMIGAFYGYGKDHF-ANTEDLWEGIFSLIASIIITIMGAALLRVNKLREKWRLKLAQALEEKTVPTGKWSDRFKHWAQKYFMFVLPFITVLREGLEAVVFIGGVSLSFPASAFPLPVITGILAGIAVGYVIYRGGNQTSLQIFLVISTCLLYLVAAGLCSRGVWYLEN----NTW----NHLIGGDAAETGAGPGSYDIRQSVWHV--------------NCCSPLVNGGGGWGIFNAILGWTNSATYGSVISYNLYWLVVIVW 309
BLAST of mRNA_H-elongata_contig8315.15950.1 vs. uniprot
Match: A0A1E3BNE3_9EURO (Uncharacterized protein n=1 Tax=Aspergillus cristatus TaxID=573508 RepID=A0A1E3BNE3_9EURO) HSP 1 Score: 154 bits (389), Expect = 1.210e-40 Identity = 101/317 (31.86%), Postives = 157/317 (49.53%), Query Frame = 1
Query: 7 VIISVLLQFLNKI--------DRQDLKPAVWKGAFTGLAGAIAIGICFIIAYYETSEQFFTGRTEYIVEAILMITASVIVTILSASMLKIAHMREKWERKLQEGMIKAEQQGSDLK--------YSYMFWLPLIAVLREGIETVIFLAGTSSSYPAEAIPIPGILGVVVGLAIGWFIFRAGREASLKNLLTVSTVILLFIAAGLFSYGVHELQELELFGTWDGERNHMVRAGTE----GDPSYRSRQVIWPQAASVLVACGNTASWNICDVADNDHEFWGLMRALFGYTCKPTPVEMIAYVLYWVMAITYLCYKLHK 897
+I++VL FL++ R+ L VW G GL + IG I A+Y + +F E++ E I + ASVI+T++ A++L++ ++EKW KL+ + + G+ K +MF +P I VLREGIE V+F+ G S S+PA A P+P I G++ G +G+ I+R G + SL+ L +ST +L +AAGL + GV L+ TW NH+V T G SY RQ +W N C WG+ A+ G+T T +++Y YW++ I + +K
Sbjct: 23 IIVAVLFSFLHQALGSDREAGIRKRLIRQVWFGIALGLFICLCIGGGMIGAFYSYGKDYFASA-EFLWEGIFALVASVIITVMGAALLRVNKLQEKWRVKLERALTEKHWSGATFKDRCKRWLQQYFMFVVPFITVLREGIEAVVFIGGVSLSFPASAFPLPVITGLLAGALVGYIIYRGGNQTSLQIFLVISTCLLYLVAAGLCTRGVWYLEN----NTW----NHLVGGETAEMGAGPGSYDIRQSVWHV--------------NCCSPLKGGGGGWGIFNAILGWTNSATYGSVLSYNFYWLVVILWFVLMRYK 316 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig8315.15950.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig8315.15950.1 >prot_H-elongata_contig8315.15950.1 ID=prot_H-elongata_contig8315.15950.1|Name=mRNA_H-elongata_contig8315.15950.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=301bp AVVIISVLLQFLNKIDRQDLKPAVWKGAFTGLAGAIAIGICFIIAYYETSback to top mRNA from alignment at H-elongata_contig8315:1557..3263+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig8315.15950.1 ID=mRNA_H-elongata_contig8315.15950.1|Name=mRNA_H-elongata_contig8315.15950.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1707bp|location=Sequence derived from alignment at H-elongata_contig8315:1557..3263+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig8315:1557..3263+ >mRNA_H-elongata_contig8315.15950.1 ID=mRNA_H-elongata_contig8315.15950.1|Name=mRNA_H-elongata_contig8315.15950.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1806bp|location=Sequence derived from alignment at H-elongata_contig8315:1557..3263+ (Himanthalia elongata Himel1 dioecious)back to top |