mRNA_H-elongata_contig82974.15933.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig82974.15933.1 vs. uniprot
Match: D8LKL6_ECTSI (Fe-S-cluster oxidoreductase-like n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKL6_ECTSI) HSP 1 Score: 178 bits (451), Expect = 2.390e-53 Identity = 79/125 (63.20%), Postives = 97/125 (77.60%), Query Frame = 1
Query: 1 EFLRDPQELAMFKSMAAEDGWCVNFDKGSRSCKIYDDRPRFCRVEAETFGDMYGVEPEEMDDFCASCCRDQIDEVYGSRSTEMRAFTGALAALARGERPVPERNPFGGDEQAIGK-QIRDWGLDE 372
E+L DP+E ++ SM DGWC +FDK SR+C +Y DRPRFCRVE ETFG MYGVEPE+MDDFC+SCC +QI +VYG+ S E+R F ALAAL RGERP P+ + FGGD + G+ QIRDWGL+E
Sbjct: 156 EYLPDPEEFDLYMSMTGSDGWCKHFDKESRACTVYSDRPRFCRVETETFGSMYGVEPEDMDDFCSSCCNEQISDVYGAESKELRVFNEALAALERGERPKPDLSAFGGDLRGQGEGQIRDWGLEE 280
BLAST of mRNA_H-elongata_contig82974.15933.1 vs. uniprot
Match: UPI001689D9A6 (YkgJ family cysteine cluster protein n=1 Tax=Richelia sinica TaxID=1357545 RepID=UPI001689D9A6) HSP 1 Score: 128 bits (321), Expect = 9.800e-36 Identity = 54/88 (61.36%), Postives = 65/88 (73.86%), Query Frame = 1
Query: 16 PQELAMFKSMAAEDGWCVNFDKGSRSCKIYDDRPRFCRVEAETFGDMYGVEPEEMDDFCASCCRDQIDEVYGSRSTEMRAFTGALAAL 279
P+EL ++ SM EDGWC+NFD SR C+IYD RPRFCRVE ETF DMYG+EPEE++DF CCR QI+ VYG RS EM F A+ +
Sbjct: 30 PEELGLYLSMVGEDGWCINFDHISRECRIYDQRPRFCRVEVETFQDMYGIEPEELNDFAIDCCRQQIEGVYGDRSLEMLRFDQAVGYI 117
BLAST of mRNA_H-elongata_contig82974.15933.1 vs. uniprot
Match: A0A218Q985_9CYAN (Uncharacterized protein n=2 Tax=unclassified Nodularia TaxID=2656917 RepID=A0A218Q985_9CYAN) HSP 1 Score: 127 bits (320), Expect = 1.270e-35 Identity = 55/85 (64.71%), Postives = 63/85 (74.12%), Query Frame = 1
Query: 16 PQELAMFKSMAAEDGWCVNFDKGSRSCKIYDDRPRFCRVEAETFGDMYGVEPEEMDDFCASCCRDQIDEVYGSRSTEMRAFTGAL 270
P ELA + SM EDGWC+NFD SR C IY +RPRFCRVE ETF DMYGVEPEE+DDF CCR+QI+ VYG RS E+ F A+
Sbjct: 30 PAELAQYLSMVGEDGWCINFDHSSRECSIYPNRPRFCRVEPETFQDMYGVEPEELDDFAIDCCREQIEGVYGDRSLEILRFNKAI 114
BLAST of mRNA_H-elongata_contig82974.15933.1 vs. uniprot
Match: A0A7C9TU73_9CYAN (YkgJ family cysteine cluster protein n=1 Tax=Oscillatoria sp. SIO1A7 TaxID=2607767 RepID=A0A7C9TU73_9CYAN) HSP 1 Score: 127 bits (319), Expect = 1.860e-35 Identity = 52/87 (59.77%), Postives = 67/87 (77.01%), Query Frame = 1
Query: 16 PQELAMFKSMAAEDGWCVNFDKGSRSCKIYDDRPRFCRVEAETFGDMYGVEPEEMDDFCASCCRDQIDEVYGSRSTEMRAFTGALAA 276
P+EL ++ SM DGWC+NFD+ SR C+IY+ RPRFCRVEAE F D+YG+EPEE++DF CCR+QID VYG RS EM + A+A+
Sbjct: 30 PEELTLYLSMVDADGWCINFDRVSRLCRIYEQRPRFCRVEAEVFSDLYGIEPEELNDFAIRCCREQIDAVYGDRSVEMDRYNQAIAS 116
BLAST of mRNA_H-elongata_contig82974.15933.1 vs. uniprot
Match: UPI0019087D7A (YkgJ family cysteine cluster protein n=1 Tax=Sphaerospermopsis aphanizomenoides TaxID=459663 RepID=UPI0019087D7A) HSP 1 Score: 127 bits (318), Expect = 2.560e-35 Identity = 55/85 (64.71%), Postives = 64/85 (75.29%), Query Frame = 1
Query: 16 PQELAMFKSMAAEDGWCVNFDKGSRSCKIYDDRPRFCRVEAETFGDMYGVEPEEMDDFCASCCRDQIDEVYGSRSTEMRAFTGAL 270
P+E+ ++ SM EDGWCVNFD +R C IY DRPRFCRVEAETF DMYG+EPEE++DF CCR QID VYG RS EM F A+
Sbjct: 30 PEEMGLYLSMVGEDGWCVNFDHETRECTIYADRPRFCRVEAETFQDMYGIEPEELNDFAIDCCRQQIDCVYGDRSLEMIRFDQAV 114
BLAST of mRNA_H-elongata_contig82974.15933.1 vs. uniprot
Match: UPI00047C8F54 (YkgJ family cysteine cluster protein n=1 Tax=Fischerella sp. PCC 9605 TaxID=1173024 RepID=UPI00047C8F54) HSP 1 Score: 125 bits (315), Expect = 8.230e-35 Identity = 52/91 (57.14%), Postives = 67/91 (73.63%), Query Frame = 1
Query: 16 PQELAMFKSMAAEDGWCVNFDKGSRSCKIYDDRPRFCRVEAETFGDMYGVEPEEMDDFCASCCRDQIDEVYGSRSTEMRAFTGALAALARG 288
P+EL ++ SM E+GWC+NFDK R C+IY +RPRFCRVE E F DMYG+ PEE++DF CC++QI+ VYG RS EM F A+ LA+G
Sbjct: 30 PEELELYLSMVGEEGWCINFDKNRRECRIYPNRPRFCRVEPEVFEDMYGITPEELNDFAIECCQEQIEGVYGDRSLEMLRFNKAVGYLAKG 120
BLAST of mRNA_H-elongata_contig82974.15933.1 vs. uniprot
Match: UPI00082F0ABA (YkgJ family cysteine cluster protein n=2 Tax=unclassified Anabaena TaxID=2619674 RepID=UPI00082F0ABA) HSP 1 Score: 124 bits (312), Expect = 2.090e-34 Identity = 53/85 (62.35%), Postives = 63/85 (74.12%), Query Frame = 1
Query: 16 PQELAMFKSMAAEDGWCVNFDKGSRSCKIYDDRPRFCRVEAETFGDMYGVEPEEMDDFCASCCRDQIDEVYGSRSTEMRAFTGAL 270
P+EL M+ SM EDGWC+NFD +R C+IY RPRFCRVE ETF DMYG+EPEE++DF CCR QI+ VYG RS EM F A+
Sbjct: 30 PEELEMYLSMVGEDGWCINFDHITRECRIYAQRPRFCRVETETFQDMYGIEPEELNDFAIDCCRQQIEAVYGDRSLEMLRFDKAV 114
BLAST of mRNA_H-elongata_contig82974.15933.1 vs. uniprot
Match: A0A1Z4QPC9_9NOST (Uncharacterized protein n=1 Tax=Cylindrospermum sp. NIES-4074 TaxID=2005457 RepID=A0A1Z4QPC9_9NOST) HSP 1 Score: 124 bits (311), Expect = 2.960e-34 Identity = 53/85 (62.35%), Postives = 64/85 (75.29%), Query Frame = 1
Query: 16 PQELAMFKSMAAEDGWCVNFDKGSRSCKIYDDRPRFCRVEAETFGDMYGVEPEEMDDFCASCCRDQIDEVYGSRSTEMRAFTGAL 270
P EL ++ SM E GWCVNFD +R C+IY+DRPRFCRVE+E F DMYG+EPEE++DF CCR+QID VYG RS EM F A+
Sbjct: 30 PAELELYLSMVGEGGWCVNFDHTTRECRIYNDRPRFCRVESEIFQDMYGIEPEELNDFAIDCCREQIDGVYGDRSLEMLRFDQAV 114
BLAST of mRNA_H-elongata_contig82974.15933.1 vs. uniprot
Match: A0A1Z4S0S9_9NOSO (Uncharacterized protein n=2 Tax=Nostoc TaxID=1177 RepID=A0A1Z4S0S9_9NOSO) HSP 1 Score: 123 bits (308), Expect = 8.450e-34 Identity = 52/85 (61.18%), Postives = 63/85 (74.12%), Query Frame = 1
Query: 16 PQELAMFKSMAAEDGWCVNFDKGSRSCKIYDDRPRFCRVEAETFGDMYGVEPEEMDDFCASCCRDQIDEVYGSRSTEMRAFTGAL 270
P EL + SM EDGWCVNFD SR C+IY +RPRFCRVE++TF DMYG+EPEE++DF CCR QI+ VYG RS E+ F A+
Sbjct: 30 PAELEQYLSMVGEDGWCVNFDHTSRECRIYPNRPRFCRVESDTFQDMYGIEPEELNDFAIDCCRQQIEAVYGDRSLELLRFNQAV 114
BLAST of mRNA_H-elongata_contig82974.15933.1 vs. uniprot
Match: A0A1Y0RFK2_9CYAN (Zinc/iron-chelating domain-containing protein n=9 Tax=Nostocales TaxID=1161 RepID=A0A1Y0RFK2_9CYAN) HSP 1 Score: 122 bits (306), Expect = 1.700e-33 Identity = 51/85 (60.00%), Postives = 63/85 (74.12%), Query Frame = 1
Query: 16 PQELAMFKSMAAEDGWCVNFDKGSRSCKIYDDRPRFCRVEAETFGDMYGVEPEEMDDFCASCCRDQIDEVYGSRSTEMRAFTGAL 270
P+EL ++ SM E GWC+N+DK SR C+IY +RPRFCRVE E F DMYG+EPEE++DF CCR QI+ VYG RS EM F A+
Sbjct: 30 PEELELYLSMVGEGGWCINYDKESRECRIYPNRPRFCRVETEVFQDMYGIEPEELNDFAIDCCRQQIEGVYGDRSLEMLRFDQAV 114 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig82974.15933.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig82974.15933.1 >prot_H-elongata_contig82974.15933.1 ID=prot_H-elongata_contig82974.15933.1|Name=mRNA_H-elongata_contig82974.15933.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=123bp MFKSMAAEDGWCVNFDKGSRSCKIYDDRPRFCRVEAETFGDMYGVEPEEMback to top mRNA from alignment at H-elongata_contig82974:1838..2761- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig82974.15933.1 ID=mRNA_H-elongata_contig82974.15933.1|Name=mRNA_H-elongata_contig82974.15933.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=924bp|location=Sequence derived from alignment at H-elongata_contig82974:1838..2761- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig82974:1838..2761- >mRNA_H-elongata_contig82974.15933.1 ID=mRNA_H-elongata_contig82974.15933.1|Name=mRNA_H-elongata_contig82974.15933.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=738bp|location=Sequence derived from alignment at H-elongata_contig82974:1838..2761- (Himanthalia elongata Himel1 dioecious)back to top |