mRNA_H-elongata_contig81845.15853.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig81845.15853.1 vs. uniprot
Match: D8LBF0_ECTSI (ATP synthase gamma chain n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBF0_ECTSI) HSP 1 Score: 501 bits (1289), Expect = 6.060e-172 Identity = 269/312 (86.22%), Postives = 289/312 (92.63%), Query Frame = 1
Query: 1 RSRITTVKNTQKITTAMRLVAAAKVRRAQDAVVKTRPFSETLQSIFGALIGQLGKEDVNLPLLNTREVKNVLLVGLSGDRGLCGAFNSYAIKKTEARAKELTGQGYNVEFVTIGKKISQYFARRDDEYTVKRAFDIGQAPDAAQASAIAQELLSDYLSGEVDSVEIIYTRFVSLISSEPSIRTLLPLSIRGIEDETDEIFQLTSEGGKFKVEREEVPDTAPAELPQDLIFEQDPIQILNSILPLYLDGQILRMLQESVAAELAARMASMGAASDNAAELSKKLSLVYNRARQASVTQELLEIVAGADAAAQG 936
R RI TV NT+KITTAMRLVAAAKVRRAQDAV++TRPFSETLQSIFGALI QLGKE+++LPLLN REVKNVLLVGLSGDRGLCGA+NSYAIKKTEAR ELT QGYNVE+VTIGKKISQYF RR D YTVKRAFD GQAP+AA+ASAIAQELLSDYLSGE DSVEI+YT+FVSLI+SEPSIRTLLPLSIRGIEDETDEIFQLT++GGKF V+REE AE+PQDLIFEQDPIQILNSILPLYLDGQILRMLQESVAAELAARMASMGAASDNAA+L+K+LSL YNRARQASVTQELLEIVAGADAA G
Sbjct: 63 RQRIVTVNNTKKITTAMRLVAAAKVRRAQDAVLRTRPFSETLQSIFGALIAQLGKENLDLPLLNAREVKNVLLVGLSGDRGLCGAYNSYAIKKTEARGNELTAQGYNVEYVTIGKKISQYFKRRSDTYTVKRAFDCGQAPNAAEASAIAQELLSDYLSGEFDSVEIVYTKFVSLIASEPSIRTLLPLSIRGIEDETDEIFQLTTQGGKFTVDREEAEPVENAEIPQDLIFEQDPIQILNSILPLYLDGQILRMLQESVAAELAARMASMGAASDNAADLAKRLSLQYNRARQASVTQELLEIVAGADAAQSG 374
BLAST of mRNA_H-elongata_contig81845.15853.1 vs. uniprot
Match: A0A835YMY9_9STRA (ATP synthase gamma chain n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMY9_9STRA) HSP 1 Score: 445 bits (1144), Expect = 4.180e-150 Identity = 241/308 (78.25%), Postives = 268/308 (87.01%), Query Frame = 1
Query: 1 RSRITTVKNTQKITTAMRLVAAAKVRRAQDAVVKTRPFSETLQSIFGALIGQLGKEDVNLPLLNTREVKNVLLVGLSGDRGLCGAFNSYAIKKTEARAKELTGQGYNVEFVTIGKKISQYFARRDDEYTVKRAFDIGQAPDAAQASAIAQELLSDYLSGEVDSVEIIYTRFVSLISSEPSIRTLLPLSIRGIEDETDEIFQLTSEGGKFKVEREEVPDTAPAELPQDLIFEQDPIQILNSILPLYLDGQILRMLQESVAAELAARMASMGAASDNAAELSKKLSLVYNRARQASVTQELLEIVAGADA 924
R RI TVKNT+KIT AMRLVAAAKVRRAQDAV++TRPFSETLQ IFGALI QLGKEDVNLPLL REV V++VG+SGDRGLCGA+NSYAIKKTEAR K L QG V+ + IGKKI+QYF RR + Y VKR+F+ GQ P AA+A+AIA+ELL+DYLSGE DSVEIIY+RFVSLISSEPSIRTLLPL IRGIE E DEIFQLTS GGKF V REEVP T AEL QDLIFEQDP+QILN+ILPLYLDGQILR+LQESVA+ELA+RM +M +ASDNA EL+ KLSL YNRARQASVTQELLEIVAGA+A
Sbjct: 59 RGRIATVKNTKKITEAMRLVAAAKVRRAQDAVLRTRPFSETLQGIFGALIEQLGKEDVNLPLLEEREVNKVIVVGISGDRGLCGAYNSYAIKKTEARIKALKAQGLEVDVIPIGKKITQYFRRRSEIYNVKRSFNCGQNPSAAEAAAIAEELLADYLSGETDSVEIIYSRFVSLISSEPSIRTLLPLKIRGIEAEGDEIFQLTSSGGKFSVNREEVPATPAAELGQDLIFEQDPVQILNAILPLYLDGQILRVLQESVASELASRMQAMASASDNAGELASKLSLQYNRARQASVTQELLEIVAGANA 366
BLAST of mRNA_H-elongata_contig81845.15853.1 vs. uniprot
Match: A0A7S2UYS0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UYS0_9STRA) HSP 1 Score: 393 bits (1009), Expect = 1.150e-129 Identity = 213/311 (68.49%), Postives = 259/311 (83.28%), Query Frame = 1
Query: 1 RSRITTVKNTQKITTAMRLVAAAKVRRAQDAVVKTRPFSETLQSIFGALIGQLGKEDVNLPLLNTREVKNVLLVGLSGDRGLCGAFNSYAIKKTEARAKELTGQGYNVEFVTIGKKISQYFARRDDEYTVKRAFDIGQAPDAAQASAIAQELLSDYLSGEVDSVEIIYTRFVSLISSEPSIRTLLPLSIRGIEDETDEIFQLTSEGGKFKVEREEVPDTAPAELPQDLIFEQDPIQILNSILPLYLDGQILRMLQESVAAELAARMASMGAASDNAAELSKKLSLVYNRARQASVTQELLEIVAGADAAAQ 933
R RI TV NT+KIT+AM+LVAAAKVRRAQDAV++TRPFSETLQ IFGALI QLG+E ++LPLL REV V+LV LSGDRGLCG++NSYAIK+TE R EL G V +T+GKKIS YF +RD V R++++GQ+P A A+AI++ELL+D+LSGE DSVE+IYTRFVSLI+S P++RT+LPL RGIE E DEIF++TSEGG+F V+RE V PAELP+DLIFEQDP+QILN+ILPLYL+GQILR LQESVA+ELAARM +M +A+DNA LSK L+ YNRARQA+VTQELLEIVAGA AA++
Sbjct: 64 RDRIKTVNNTKKITSAMKLVAAAKVRRAQDAVLQTRPFSETLQKIFGALIKQLGREFLDLPLLQEREVNKVVLVCLSGDRGLCGSYNSYAIKRTEQRMAELKAAGVEVSLITVGKKISSYFNKRDTP--VLRSYEMGQSPTGADATAISEELLADFLSGECDSVELIYTRFVSLIASTPAVRTMLPLKPRGIETEGDEIFEMTSEGGQFSVKREAVEAAEPAELPKDLIFEQDPVQILNAILPLYLNGQILRTLQESVASELAARMQAMQSATDNAKSLSKTLTSEYNRARQAAVTQELLEIVAGATAASE 372
BLAST of mRNA_H-elongata_contig81845.15853.1 vs. uniprot
Match: A0A7S1CZK0_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1CZK0_CYCTE) HSP 1 Score: 372 bits (956), Expect = 9.050e-122 Identity = 202/308 (65.58%), Postives = 247/308 (80.19%), Query Frame = 1
Query: 1 RSRITTVKNTQKITTAMRLVAAAKVRRAQDAVVKTRPFSETLQSIFGALIGQLGKEDVNLPLLNTREVKNVLLVGLSGDRGLCGAFNSYAIKKTEARAKELTGQGYNVEFVTIGKKISQYFARRDDEYTVKRAFDIGQAPDAAQASAIAQELLSDYLSGEVDSVEIIYTRFVSLISSEPSIRTLLPLSIRGIEDETDEIFQLTSEGGKFKVEREEVPDTAPAELPQDLIFEQDPIQILNSILPLYLDGQILRMLQESVAAELAARMASMGAASDNAAELSKKLSLVYNRARQASVTQELLEIVAGADA 924
R RI +V NT+KIT AM+LVAAAKVRRAQDAV+ TRPFSETLQS+FG LI +LG E+++LPLL R+VK V LV ++GDRGLCG +NS+ I+K EAR KELT QG V+ V IGKK YF RR+ Y ++ A D GQ PDA+QA I+QELL+ YLSGE D++E++YT+FVSLI+S PS RTL+P S I + DE+FQLTS GG F VER+E+ P E P D+IFEQDP++I+N+ILPLYL+GQILR LQESVA+ELAARM SM +ASDNAAEL++KLSL YNRARQA+VTQE+LEIVAGA A
Sbjct: 60 RDRIKSVTNTKKITMAMKLVAAAKVRRAQDAVLATRPFSETLQSVFGGLISRLGGENIDLPLLTQRDVKKVTLVVITGDRGLCGGYNSFMIRKAEARYKELTDQGIGVDMVLIGKKGVGYFERRN--YPIRLAVDCGQNPDASQALQISQELLNSYLSGETDAIELLYTKFVSLIASTPSTRTLVPFSASEITSQADEVFQLTSSGGDFGVERKELEVAEPQEFPNDMIFEQDPLEIVNAILPLYLNGQILRTLQESVASELAARMQSMQSASDNAAELARKLSLEYNRARQAAVTQEILEIVAGATA 365
BLAST of mRNA_H-elongata_contig81845.15853.1 vs. uniprot
Match: A0A7S0GKQ1_9STRA (Hypothetical protein n=3 Tax=Sar TaxID=2698737 RepID=A0A7S0GKQ1_9STRA) HSP 1 Score: 370 bits (951), Expect = 5.480e-121 Identity = 200/308 (64.94%), Postives = 245/308 (79.55%), Query Frame = 1
Query: 1 RSRITTVKNTQKITTAMRLVAAAKVRRAQDAVVKTRPFSETLQSIFGALIGQLGKEDVNLPLLNTREVKNVLLVGLSGDRGLCGAFNSYAIKKTEARAKELTGQGYNVEFVTIGKKISQYFARRDDEYTVKRAFDIGQAPDAAQASAIAQELLSDYLSGEVDSVEIIYTRFVSLISSEPSIRTLLPLSIRGIEDETDEIFQLTSEGGKFKVEREEVPDTAPAELPQDLIFEQDPIQILNSILPLYLDGQILRMLQESVAAELAARMASMGAASDNAAELSKKLSLVYNRARQASVTQELLEIVAGADA 924
R RI VKNTQKIT AM+LVAAAKVRRAQDAVV TRPFSETLQS+FG L+ +LG + ++LPLL R+VK V LV +SGDRGLCG +NS+ IKKT+AR KEL QG VE V +GKK + YF+RR+ Y + + FD GQ P+A QA+AI++E+LS YL+GE D+VE+ YT+FVSLI+S PS RTL+P S I E+DEI+QLTS GKF+VER+++ P E P D+IFEQDPIQI+NSILPLYL+GQ+LR LQESVA+ELAARM +M AA+DNA +LS LS YNRARQASVT E+LEIV+GA A
Sbjct: 61 RDRIKIVKNTQKITMAMKLVAAAKVRRAQDAVVATRPFSETLQSVFGGLVQRLGSDTIDLPLLTQRDVKKVTLVIISGDRGLCGGYNSFMIKKTDARFKELVAQGIEVEMVLVGKKANAYFSRRN--YPIVKYFDCGQNPNAKQANAISEEILSTYLAGETDTVELYYTKFVSLIASSPSTRTLIPFSASEISQESDEIYQLTSSEGKFEVERKDLGAAEPQEFPNDMIFEQDPIQIVNSILPLYLNGQLLRCLQESVASELAARMNAMQAAADNAGDLSSALSQEYNRARQASVTAEILEIVSGASA 366
BLAST of mRNA_H-elongata_contig81845.15853.1 vs. uniprot
Match: B8C0W4_THAPS (ATP synthase n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C0W4_THAPS) HSP 1 Score: 365 bits (936), Expect = 9.250e-119 Identity = 193/308 (62.66%), Postives = 246/308 (79.87%), Query Frame = 1
Query: 1 RSRITTVKNTQKITTAMRLVAAAKVRRAQDAVVKTRPFSETLQSIFGALIGQLGKEDVNLPLLNTREVKNVLLVGLSGDRGLCGAFNSYAIKKTEARAKELTGQGYNVEFVTIGKKISQYFARRDDEYTVKRAFDIGQAPDAAQASAIAQELLSDYLSGEVDSVEIIYTRFVSLISSEPSIRTLLPLSIRGIEDETDEIFQLTSEGGKFKVEREEVPDTAPAELPQDLIFEQDPIQILNSILPLYLDGQILRMLQESVAAELAARMASMGAASDNAAELSKKLSLVYNRARQASVTQELLEIVAGADA 924
R RIT+V NT+KIT+AM+LVAAAKVRRAQD+V+ TRPFSETLQS+FG LI +LG E +LPLL REV V + ++GDRGLCG +NS+ IKK EAR KELT QG +F+ IGKK + YFARR EY +++ FD GQ P++ +A AI++E+++ +LSGE D+VE++YT+FVSLI+S PS+RTL+P S I + DE+FQLTS+ G F VER+E+ P + P D+IFEQDP+QI+NSILPLYL+GQILR LQESVA+ELAARM SM +ASDNA L+K+LS YNRARQA+VTQE+LEIV+GA A
Sbjct: 60 RDRITSVNNTKKITSAMKLVAAAKVRRAQDSVLATRPFSETLQSVFGGLINRLGGEAADLPLLTQREVNKVTITVITGDRGLCGGYNSFMIKKAEARYKELTAQGIECDFILIGKKGASYFARR--EYPIRKVFDCGQNPNSKEALAISEEIINSFLSGETDAVELLYTKFVSLIASSPSVRTLVPFSASEISQKGDEVFQLTSQDGDFGVERKELEVAEPQDFPNDMIFEQDPLQIVNSILPLYLNGQILRTLQESVASELAARMQSMQSASDNAKALAKRLSQEYNRARQAAVTQEILEIVSGATA 365
BLAST of mRNA_H-elongata_contig81845.15853.1 vs. uniprot
Match: ATPG_TRICV (ATP synthase gamma chain, chloroplastic n=1 Tax=Trieres chinensis TaxID=1514140 RepID=ATPG_TRICV) HSP 1 Score: 363 bits (933), Expect = 2.890e-118 Identity = 197/308 (63.96%), Postives = 242/308 (78.57%), Query Frame = 1
Query: 1 RSRITTVKNTQKITTAMRLVAAAKVRRAQDAVVKTRPFSETLQSIFGALIGQLGKEDVNLPLLNTREVKNVLLVGLSGDRGLCGAFNSYAIKKTEARAKELTGQGYNVEFVTIGKKISQYFARRDDEYTVKRAFDIGQAPDAAQASAIAQELLSDYLSGEVDSVEIIYTRFVSLISSEPSIRTLLPLSIRGIEDETDEIFQLTSEGGKFKVEREEVPDTAPAELPQDLIFEQDPIQILNSILPLYLDGQILRMLQESVAAELAARMASMGAASDNAAELSKKLSLVYNRARQASVTQELLEIVAGADA 924
R RIT+VKNT+KIT AM+LVAAAKVRRAQDAV+ TRPFSETLQS+FG LI ++G E ++LPLL REV V LV ++GDRGLCG +NS+ IKK EAR EL QG + V IGKK YF RR Y +++ F+ GQ PD+ QA AI++ELL+ YLSGE D+VE++YT+F+SLI+S PS RTL+P S I + DE+FQLTS GG F+VER E+ P + P D+IFEQDPIQI+NSILPLYL+GQILR LQESVA+ELAARM SM +ASDNA +L+K+LS YNRARQA+VTQE+LEIV+GA A
Sbjct: 63 RDRITSVKNTKKITMAMKLVAAAKVRRAQDAVLATRPFSETLQSVFGGLIARMGGEALDLPLLTQREVSKVTLVVITGDRGLCGGYNSFMIKKAEARFNELKDQGVACDMVLIGKKGITYFQRRG--YPIRKTFETGQNPDSKQALAISEELLNTYLSGESDAVELLYTKFISLIASSPSARTLIPFSASEITQQGDEVFQLTSSGGDFEVERTELEVAEPQDFPNDMIFEQDPIQIINSILPLYLNGQILRTLQESVASELAARMQSMQSASDNAGDLAKRLSTEYNRARQAAVTQEILEIVSGASA 368
BLAST of mRNA_H-elongata_contig81845.15853.1 vs. uniprot
Match: A0A5J4Z1R1_PORPP (ATP synthase gamma chain, chloroplastic n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z1R1_PORPP) HSP 1 Score: 363 bits (931), Expect = 3.490e-118 Identity = 198/306 (64.71%), Postives = 239/306 (78.10%), Query Frame = 1
Query: 1 RSRITTVKNTQKITTAMRLVAAAKVRRAQDAVVKTRPFSETLQSIFGALIGQLGKEDVNLPLLNTREVKNVLLVGLSGDRGLCGAFNSYAIKKTEARAKELTGQGYNVEFVTIGKKISQYFARRDDEYTVKRAFDIGQAPDAAQASAIAQELLSDYLSGEVDSVEIIYTRFVSLISSEPSIRTLLPLSIRGIEDETDEIFQLTSEGGKFKVEREEVPDTAPAELPQDLIFEQDPIQILNSILPLYLDGQILRMLQESVAAELAARMASMGAASDNAAELSKKLSLVYNRARQASVTQELLEIVAGA 918
R RI +VKNTQKITTAM+LVAAAKVRRAQDAV++TRPFSETLQ + G L+ +L E +++PLL RE KNV+LV SGDRGLCG +NS AIK++E R KEL G NVE +TIG K SQYF RR +YTV+RAF IGQAP A QA+ I E+LS+YLSGEVD VE++YTRFVSLISS PS+RTLLPLS GIE DEIF LTS+ G+F V P P +IFEQDP Q+LN+ILPLYL+GQ+LR LQESVA+ELA+RM++M A+DNA +LSK L++VYNRARQA +TQE+ EI AG+
Sbjct: 50 RDRIGSVKNTQKITTAMKLVAAAKVRRAQDAVLRTRPFSETLQKVLGGLLKRLENEFLDVPLLEEREAKNVVLVVTSGDRGLCGGYNSNAIKQSERRVKELLATGVNVELITIGNKASQYFGRRP-QYTVRRAFPIGQAPTAEQATEITDEILSEYLSGEVDRVELLYTRFVSLISSTPSVRTLLPLSPTGIETNGDEIFALTSKDGQFSVNSSIAPVAEAEVFPSQMIFEQDPQQLLNAILPLYLNGQVLRALQESVASELASRMSAMSNATDNAKQLSKDLTIVYNRARQAKITQEISEICAGS 354
BLAST of mRNA_H-elongata_contig81845.15853.1 vs. uniprot
Match: A0A1E7FDS7_9STRA (Chloroplast ATPase gamma subunit n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FDS7_9STRA) HSP 1 Score: 360 bits (925), Expect = 4.460e-117 Identity = 197/308 (63.96%), Postives = 242/308 (78.57%), Query Frame = 1
Query: 1 RSRITTVKNTQKITTAMRLVAAAKVRRAQDAVVKTRPFSETLQSIFGALIGQLGKEDVNLPLLNTREVKNVLLVGLSGDRGLCGAFNSYAIKKTEARAKELTGQGYNVEFVTIGKKISQYFARRDDEYTVKRAFDIGQAPDAAQASAIAQELLSDYLSGEVDSVEIIYTRFVSLISSEPSIRTLLPLSIRGIEDETDEIFQLTSEGGKFKVEREEVPDTAPAELPQDLIFEQDPIQILNSILPLYLDGQILRMLQESVAAELAARMASMGAASDNAAELSKKLSLVYNRARQASVTQELLEIVAGADA 924
R RI++VKNT+KIT AM+LVAAAKVRRAQDAV+ TRPFSETLQS+FG LI +LG E ++LPLL REVK V L ++GDRGLCG +NS+ IKK EAR KELT QG V+ V IG K YF RR ++ ++ F+ GQ P+A A AI++ELL+ +LSGE D++E++YT+FVSLI+S P++RTL+P S I DE+FQLTSE G+F VER E+ P E P D+IFEQDP+QI+NSILPLYL+GQ+LR LQESVA+ELAARM SM +ASDNA L K+LSL YNRARQA+VTQELLEIVAGA A
Sbjct: 62 RDRISSVKNTKKITMAMKLVAAAKVRRAQDAVLATRPFSETLQSVFGGLIARLGGEAMDLPLLTQREVKKVTLTVVTGDRGLCGGYNSFMIKKAEARYKELTAQGIEVDMVLIGVKGIAYFERR--KFPIRAKFECGQNPNAKDALAISEELLNTFLSGETDAIELLYTKFVSLIASVPAVRTLVPFSASDITQTGDEVFQLTSESGEFSVERTELAVAEPQEFPNDMIFEQDPLQIVNSILPLYLNGQVLRTLQESVASELAARMQSMQSASDNAGALEKELSLQYNRARQAAVTQELLEIVAGAMA 367
BLAST of mRNA_H-elongata_contig81845.15853.1 vs. uniprot
Match: A0A7S3V5U7_9STRA (Hypothetical protein n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V5U7_9STRA) HSP 1 Score: 360 bits (924), Expect = 5.900e-117 Identity = 194/308 (62.99%), Postives = 241/308 (78.25%), Query Frame = 1
Query: 1 RSRITTVKNTQKITTAMRLVAAAKVRRAQDAVVKTRPFSETLQSIFGALIGQLGKEDVNLPLLNTREVKNVLLVGLSGDRGLCGAFNSYAIKKTEARAKELTGQGYNVEFVTIGKKISQYFARRDDEYTVKRAFDIGQAPDAAQASAIAQELLSDYLSGEVDSVEIIYTRFVSLISSEPSIRTLLPLSIRGIEDETDEIFQLTSEGGKFKVEREEVPDTAPAELPQDLIFEQDPIQILNSILPLYLDGQILRMLQESVAAELAARMASMGAASDNAAELSKKLSLVYNRARQASVTQELLEIVAGADA 924
R RI+TVKNT+KIT AM+LVAAAKVRRAQDAV+ TRPFSETLQS+FG L+ ++G + ++PLL REVK V + ++GDRGLCG +NS+ IKK EAR +EL G +V+ V IGKK YF RD Y ++ F+ GQ P++ +A AI++ELL+ YLSGE D++E++YT+FVSLI+S PS+RTL+P S I ++ DE+FQLTS G F+VER E+ AP E P D+IFEQDP QI+NSILPLYL+GQILR +QESVAAELAARMASM AASDNA L K LS+ YNRARQASVT E+LEIVAGA A
Sbjct: 60 RDRISTVKNTKKITMAMKLVAAAKVRRAQDAVLATRPFSETLQSVFGGLVERMGGDTADIPLLTQREVKKVTICCITGDRGLCGGYNSFMIKKAEARFQELKAAGLDVDMVLIGKKGISYFTNRD--YPIRAQFECGQNPNSKEALAISEELLNTYLSGETDTIELLYTKFVSLIASVPSVRTLVPFSASEITNKGDEVFQLTSSSGDFEVERTELDAAAPQEFPNDMIFEQDPTQIVNSILPLYLNGQILRTMQESVAAELAARMASMQAASDNAGALEKDLSMQYNRARQASVTAEILEIVAGASA 365 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig81845.15853.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig81845.15853.1 >prot_H-elongata_contig81845.15853.1 ID=prot_H-elongata_contig81845.15853.1|Name=mRNA_H-elongata_contig81845.15853.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=299bp MRLVAAAKVRRAQDAVVKTRPFSETLQSIFGALIGQLGKEDVNLPLLNTRback to top mRNA from alignment at H-elongata_contig81845:732..2450+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig81845.15853.1 ID=mRNA_H-elongata_contig81845.15853.1|Name=mRNA_H-elongata_contig81845.15853.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1719bp|location=Sequence derived from alignment at H-elongata_contig81845:732..2450+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig81845:732..2450+ >mRNA_H-elongata_contig81845.15853.1 ID=mRNA_H-elongata_contig81845.15853.1|Name=mRNA_H-elongata_contig81845.15853.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1794bp|location=Sequence derived from alignment at H-elongata_contig81845:732..2450+ (Himanthalia elongata Himel1 dioecious)back to top |