mRNA_H-elongata_contig81737.15840.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig81737.15840.1 vs. uniprot
Match: D7FU12_ECTSI (GST N-terminal domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FU12_ECTSI) HSP 1 Score: 221 bits (563), Expect = 1.140e-69 Identity = 100/124 (80.65%), Postives = 108/124 (87.10%), Query Frame = 1
Query: 19 GVIVNVSREEEGDEGEYAFIRALGFKVVERGNTWDRKQPWKPIEIYEFEGCPFCRKVREAVNILDLDVIFYPCPQGGPNFRPKANEMGGQNQFPYLVDPNTKTSMYESDNIVNYLFEKYGEGSK 390
G V VSREEEGDEGEYA +RALGFKV ERGNTWDR+QP KPIEIYEFEGCPFCRKVREA+NI+D+DV+FYPCPQGGP FRPKA EMG FPY+VDPNTKTSM ESD IV YLFE YGEG+K
Sbjct: 84 GYTVKVSREEEGDEGEYAVVRALGFKVTERGNTWDRQQPRKPIEIYEFEGCPFCRKVREAINIVDIDVVFYPCPQGGPTFRPKAKEMG-TTAFPYMVDPNTKTSMPESDEIVKYLFETYGEGAK 206
BLAST of mRNA_H-elongata_contig81737.15840.1 vs. uniprot
Match: A0A2K1KUA5_PHYPA (Uncharacterized protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1KUA5_PHYPA) HSP 1 Score: 167 bits (422), Expect = 3.820e-48 Identity = 81/124 (65.32%), Postives = 94/124 (75.81%), Query Frame = 1
Query: 13 RGGVIVNVSREEEGDEGEYAFIRALGFKVVERGNTWDRKQPWKPIEIYEFEGCPFCRKVREAVNILDLDVIFYPCPQGGPNFRPKANEMGGQNQFPYLVDPNTKTSMYESDNIVNYLFEKYGEG 384
+G + N E GD+ +YA I G K VE N R P KPIEIYEFEGCPFCRKVRE V+ILD+DVIFYPCP+ GPNFRPKANEMGG+ QFPY+VDPNT +MYESD+I+ YL EKYG+G
Sbjct: 108 KGYKVENKPAAEVGDD-KYA-IPFAGRKFVEVANPGPR--PEKPIEIYEFEGCPFCRKVREIVSILDIDVIFYPCPKNGPNFRPKANEMGGKKQFPYMVDPNTNVAMYESDDIIKYLVEKYGDG 227
BLAST of mRNA_H-elongata_contig81737.15840.1 vs. uniprot
Match: A9T3Z2_PHYPA (Predicted protein (Fragment) n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9T3Z2_PHYPA) HSP 1 Score: 162 bits (411), Expect = 1.930e-47 Identity = 80/124 (64.52%), Postives = 93/124 (75.00%), Query Frame = 1
Query: 13 RGGVIVNVSREEEGDEGEYAFIRALGFKVVERGNTWDRKQPWKPIEIYEFEGCPFCRKVREAVNILDLDVIFYPCPQGGPNFRPKANEMGGQNQFPYLVDPNTKTSMYESDNIVNYLFEKYGEG 384
+G + N E GD+ +YA A F VE N R P KPIEIYEFEGCPFCRKVRE V+ILD+DVIFYPCP+ GPNFRPKANEMGG+ QFPY+VDPNT +MYESD+I+ YL EKYG+G
Sbjct: 29 KGYKVENKPAAEVGDD-KYAIPFAGIF--VEVANPGPR--PEKPIEIYEFEGCPFCRKVREIVSILDIDVIFYPCPKNGPNFRPKANEMGGKKQFPYMVDPNTNVAMYESDDIIKYLVEKYGDG 147
BLAST of mRNA_H-elongata_contig81737.15840.1 vs. uniprot
Match: A0A2V0NQ52_9CHLO (Uncharacterized protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0NQ52_9CHLO) HSP 1 Score: 160 bits (404), Expect = 3.970e-46 Identity = 69/124 (55.65%), Postives = 89/124 (71.77%), Query Frame = 1
Query: 16 GGVIVNVSREEEGDEGEYAFIRALGFKVVERGNTWDRKQPWKPIEIYEFEGCPFCRKVREAVNILDLDVIFYPCPQGGPNFRPKANEMGGQNQFPYLVDPNTKTSMYESDNIVNYLFEKYGEGS 387
GG S + D+G Y ++ G V E K+P KP+E+YEF+GCPFCRKVREA+++LDLD +PCPQGGP +RPKA E+GG+ QFPYLVDPNT SMYESD I+ YLF++YG+G+
Sbjct: 46 GGFASGYSTGLKEDDGTYGVVKVSGRSVAESSKVSTFKRPAKPLELYEFQGCPFCRKVREAISVLDLDAAVFPCPQGGPTWRPKAVELGGKAQFPYLVDPNTGASMYESDAIIAYLFKEYGDGA 169
BLAST of mRNA_H-elongata_contig81737.15840.1 vs. uniprot
Match: A0A5J4XKT2_9CHLO (Thioredoxin family n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XKT2_9CHLO) HSP 1 Score: 161 bits (407), Expect = 4.020e-46 Identity = 72/123 (58.54%), Postives = 88/123 (71.54%), Query Frame = 1
Query: 16 GGVIVNVSREEEGDEGEYAFIRALGFKVVERGNTWDRKQPWKPIEIYEFEGCPFCRKVREAVNILDLDVIFYPCPQGGPNFRPKANEMGGQNQFPYLVDPNTKTSMYESDNIVNYLFEKYGEG 384
GG V S + + D+G Y ++ G KV E K+P K IEIYEFEGCPFCRKVREAV+ILDLDV+FYPCP GGP +R K + GG+ FPY+VDPNT ++MYESD+IV YLF YG+G
Sbjct: 87 GGFGVGYSAKLDTDDGTYGAVKLAGRKVTETSQVGQFKRPSKMIEIYEFEGCPFCRKVREAVSILDLDVMFYPCPAGGPTWREKVKQKGGKASFPYMVDPNTGSAMYESDDIVKYLFNNYGDG 209
BLAST of mRNA_H-elongata_contig81737.15840.1 vs. uniprot
Match: A0A8J5WCY2_ZIZPA (Uncharacterized protein n=1 Tax=Zizania palustris TaxID=103762 RepID=A0A8J5WCY2_ZIZPA) HSP 1 Score: 161 bits (407), Expect = 5.390e-46 Identity = 75/123 (60.98%), Postives = 90/123 (73.17%), Query Frame = 1
Query: 19 GVIVNVSREEEGDEGEYAFIRALGFKVVERGNTWDRKQPWKPIEIYEFEGCPFCRKVREAVNILDLDVIFYPCPQGGPNFRPKANEMGGQNQFPYLVDPNTKTSMYESDNIVNYLFEKYGEGS 387
G V++ +E +YA + LG KV E +P KPIEIYEFEGCPFCRKVRE V++LDLDV+FYPCPQ GP FRPK EMGG+ QFPY+VDPNT SMYESD+I+ YL +KYG+GS
Sbjct: 101 GYSVSLVSSDEVPPDQYA-LEFLGRKVKETSRIARCPRPEKPIEIYEFEGCPFCRKVREMVSVLDLDVLFYPCPQNGPTFRPKVLEMGGKKQFPYMVDPNTGISMYESDDIIKYLADKYGDGS 222
BLAST of mRNA_H-elongata_contig81737.15840.1 vs. uniprot
Match: UPI0005D3B831 (uncharacterized protein LOC18444845 isoform X1 n=1 Tax=Amborella trichopoda TaxID=13333 RepID=UPI0005D3B831) HSP 1 Score: 160 bits (406), Expect = 7.610e-46 Identity = 70/115 (60.87%), Postives = 86/115 (74.78%), Query Frame = 1
Query: 43 EEEGDEGEYAFIRALGFKVVERGNTWDRKQPWKPIEIYEFEGCPFCRKVREAVNILDLDVIFYPCPQGGPNFRPKANEMGGQNQFPYLVDPNTKTSMYESDNIVNYLFEKYGEGS 387
E+E EY F+ GFK+ E R P KPIEIYEFEGCPFCRKVRE V+ LDLDV++YPCP+ GPNFRPK ++GG+ QFPY+VDPNT +MYESD I+ YL +KYG+G+
Sbjct: 104 EKEIPPSEYVFLNFAGFKLKETSRVGPR--PTKPIEIYEFEGCPFCRKVREVVSFLDLDVLYYPCPRNGPNFRPKVLQIGGRQQFPYMVDPNTGVAMYESDAIIKYLVDKYGDGT 216
BLAST of mRNA_H-elongata_contig81737.15840.1 vs. uniprot
Match: U5D555_AMBTC (GST N-terminal domain-containing protein n=2 Tax=Amborella trichopoda TaxID=13333 RepID=U5D555_AMBTC) HSP 1 Score: 160 bits (406), Expect = 9.880e-46 Identity = 70/115 (60.87%), Postives = 86/115 (74.78%), Query Frame = 1
Query: 43 EEEGDEGEYAFIRALGFKVVERGNTWDRKQPWKPIEIYEFEGCPFCRKVREAVNILDLDVIFYPCPQGGPNFRPKANEMGGQNQFPYLVDPNTKTSMYESDNIVNYLFEKYGEGS 387
E+E EY F+ GFK+ E R P KPIEIYEFEGCPFCRKVRE V+ LDLDV++YPCP+ GPNFRPK ++GG+ QFPY+VDPNT +MYESD I+ YL +KYG+G+
Sbjct: 104 EKEIPPSEYVFLNFAGFKLKETSRVGPR--PTKPIEIYEFEGCPFCRKVREVVSFLDLDVLYYPCPRNGPNFRPKVLQIGGRQQFPYMVDPNTGVAMYESDAIIKYLVDKYGDGT 216
BLAST of mRNA_H-elongata_contig81737.15840.1 vs. uniprot
Match: A0A804IFI6_MUSAM ((wild Malaysian banana) hypothetical protein n=3 Tax=Musa TaxID=4640 RepID=A0A804IFI6_MUSAM) HSP 1 Score: 160 bits (404), Expect = 1.250e-45 Identity = 70/123 (56.91%), Postives = 92/123 (74.80%), Query Frame = 1
Query: 19 GVIVNVSREEEGDEGEYAFIRALGFKVVERGNTWDRKQPWKPIEIYEFEGCPFCRKVREAVNILDLDVIFYPCPQGGPNFRPKANEMGGQNQFPYLVDPNTKTSMYESDNIVNYLFEKYGEGS 387
G V++ E++ GEYA ++ G E N + +P KPIEIYEFEGCPFCRKVRE V+ILDLD+++YPCP+ PNFRPK +MGG+ QFPY+VDPNT +MYESD+I+ YL +KYG+G+
Sbjct: 93 GYSVSLVSEDKIPPGEYA-LKIAGLTFKETSNLGAQARPEKPIEIYEFEGCPFCRKVREIVSILDLDILYYPCPRNSPNFRPKVLQMGGKQQFPYMVDPNTGVAMYESDDIIKYLVQKYGDGT 214
BLAST of mRNA_H-elongata_contig81737.15840.1 vs. uniprot
Match: A0A6A5MS47_LUPAL (Putative thioredoxin-like protein n=2 Tax=Lupinus TaxID=3869 RepID=A0A6A5MS47_LUPAL) HSP 1 Score: 160 bits (404), Expect = 1.340e-45 Identity = 69/115 (60.00%), Postives = 87/115 (75.65%), Query Frame = 1
Query: 43 EEEGDEGEYAFIRALGFKVVERGNTWDRKQPWKPIEIYEFEGCPFCRKVREAVNILDLDVIFYPCPQGGPNFRPKANEMGGQNQFPYLVDPNTKTSMYESDNIVNYLFEKYGEGS 387
++E G+YA + G+K+ E +P KPIEIYEFE CPFCRKVRE V ILD+DV+FYPCP+ GPNFRPK E+GG+ QFPY+VDPNT TSMYESD+I+ YL +YG+G+
Sbjct: 102 KDEIPPGQYAMLEVNGYKLKETSKANLSPRPEKPIEIYEFESCPFCRKVREIVAILDIDVLFYPCPRNGPNFRPKVVEIGGKQQFPYMVDPNTDTSMYESDDIIRYLVGQYGDGN 216 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig81737.15840.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig81737.15840.1 >prot_H-elongata_contig81737.15840.1 ID=prot_H-elongata_contig81737.15840.1|Name=mRNA_H-elongata_contig81737.15840.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=139bp MLNTRGGVIVNVSREEEGDEGEYAFIRALGFKVVERGNTWDRKQPWKPIEback to top mRNA from alignment at H-elongata_contig81737:344..1418+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig81737.15840.1 ID=mRNA_H-elongata_contig81737.15840.1|Name=mRNA_H-elongata_contig81737.15840.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1075bp|location=Sequence derived from alignment at H-elongata_contig81737:344..1418+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig81737:344..1418+ >mRNA_H-elongata_contig81737.15840.1 ID=mRNA_H-elongata_contig81737.15840.1|Name=mRNA_H-elongata_contig81737.15840.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=834bp|location=Sequence derived from alignment at H-elongata_contig81737:344..1418+ (Himanthalia elongata Himel1 dioecious)back to top |