mRNA_H-elongata_contig79140.15573.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig79140.15573.1 vs. uniprot
Match: A0A6H5KNH5_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNH5_9PHAE) HSP 1 Score: 343 bits (879), Expect = 2.520e-106 Identity = 192/437 (43.94%), Postives = 249/437 (56.98%), Query Frame = 1
Query: 13 RWVNTIKADGTFESRLVVEGWSQVPGIDYGGTFTPVCRLQSIRMMLAIAVE-----------------LAYEIYMMGY-----------------------DPCMYIYEDEVGFVFLTLYVDNLLVQGANKE--------------------------------------------YTDNIRERFGMTGCNPAYTPGVEPALSLNQPEEKLLDEKDNKRYQSITGAVMNLAQVSRYDIIFAVNQLARAMSKPSKAHMGAAKHLLRYLAGT-------------LVAYSDANLGNNRDNGKLTPSYIVMLAYGPVSFKLGLQSLNAQSTMEAELVAAALTMKEAVLCSSMMVELGFEKGFNSVPLYLDNTSTLHVAGNRTYSPRAKHIALRYVFVQEQVEEGMITIHYVNTQDQLANLGTKHLGKHRHLARIKPLNDF 1032
+WV KADGTF+ R+V +GW+QVPG+D G T+ PVCR+QS+RM+ I V+ L +Y + DPC+Y+Y+ ++LTLYVD+LL+ G + + Y +I ERFGM+G P TPG +S QPE+ LLDEK+ ++YQ I G++M +AQV RYDI++A QLAR M+KPSK HM AAKH LRYLAGT L +SD+N NN DNGK T SY+ MLA P+SF+ GLQ L A STMEAELVA+AL MKEAV CS+MM ELGF K F +P+Y DNT+TLH GNR++S R KHIALR+ F++E V EG I+IHYV T+D LA++GTKH HR + +N+F
Sbjct: 559 KWVFKRKADGTFKGRVVAQGWNQVPGLDCGSTYAPVCRIQSVRMVACITVDFNLIFDQMDDGGDMVMKLNKSLYGLAQSPGNWFNTIDPVLVEIGFVALKSDPCVYLYDHNGAKIYLTLYVDDLLLAGNDSDAISMVKGKLQKRFKMTDLGEASLVLRMEIRRDREANTLTISQEAYCKSILERFGMSGSKPTSTPGYGSEISNIQPEDTLLDEKETRKYQGIVGSLMYIAQVLRYDIMYATGQLARPMAKPSKVHMVAAKHTLRYLAGTIDFSITYKKGGFKLATFSDSNWANNPDNGKSTSSYLTMLANAPMSFRSGLQGLTAMSTMEAELVASALAMKEAVFCSNMMTELGFGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYVRTEDNLADIGTKHFNNHRFKHLMDLINNF 995
BLAST of mRNA_H-elongata_contig79140.15573.1 vs. uniprot
Match: A0A6H5L6R7_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6R7_9PHAE) HSP 1 Score: 334 bits (856), Expect = 5.640e-105 Identity = 190/429 (44.29%), Postives = 256/429 (59.67%), Query Frame = 1
Query: 1 VVGIRWVNTIKADGTFESRLVVEGWSQVPGIDYGGTFTPVCRLQSIRMMLAIAVELAYEIYMM---------------------GY----------------------------------------------DPCMYIYEDEVGFVFLTLYVDNLLV--QGANKE---YTDNIRERFGMTGCNPAYTPGVEPALSLNQPEEKLLDEKDNKRYQSITGAVMNLAQVSRYDIIFAVNQLARAMSKPSKAHMGAAKHLLRYLAGT-------------LVAYSDANLGNNRDNGKLTPSYIVMLAYGPVSFKLGLQSLNAQSTMEAELVAAALTMKEAVLCSSMMVELGFEKGFNSVPLYLDNTSTLHVAGNRTYSPRAKHIALRYVFVQEQVEEGMITIHYVNTQDQLANLGTKHLGKHRHLARIKPLNDF 1032
V+G +WV +K + T ++RLV +GW+QVPG D GGTF PVCRLQSIRM+ AIA E ++ + GY D C+YIY+ V LTLYVD+LL+ GA+ + YT +I +RFGM C P T G P LS+ QPEE LL+ + +RYQ+I G+VM LAQV+RYDI++ +Q ARAMS PSK HMGAAKHLLRYL+G+ L A S+AN G+N DNGK SYI+M++ P S K GLQSL A ST+EAELVA+AL MKE + C++MM ELGF F+S PL++D+T+TL+V GN+T+S KH+ALR+ ++++ V+EG I+IHY+ T+D LA++GT++L K RH I + +F
Sbjct: 348 VIGSKWVFKVKPENTHKARLVAKGWNQVPGRDCGGTFAPVCRLQSIRMVFAIAAEKDLDVIQLDVKTAFLYADIEENVFVEMAPGYEAKNMEELQLVMKLEKSLDGLAQSPQDWLKTIDSSLVEIGFFPLKSDTCVYIYDHNNTVVVLTLYVDDLLIIRGGAHHQPGNYTTSILDRFGMGSCKPLSTAGFGPELSVKQPEETLLNAEGKQRYQAIIGSVMYLAQVTRYDIMYCASQFARAMSNPSKIHMGAAKHLLRYLSGSRDFSITYKRGGFDLTASSNANGGHNTDNGKSMSSYIMMMSTAPASLKSGLQSLTAMSTVEAELVASALAMKEVIFCTNMMKELGFGSEFSSAPLFIDSTATLNVIGNQTFSGHTKHMALRFFYIRKIVKEGRISIHYIPTEDNLADIGTEYLNKQRHQYLIDKIKNF 776
BLAST of mRNA_H-elongata_contig79140.15573.1 vs. uniprot
Match: A0A6H5JME8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JME8_9PHAE) HSP 1 Score: 327 bits (837), Expect = 2.450e-103 Identity = 196/484 (40.50%), Postives = 257/484 (53.10%), Query Frame = 1
Query: 13 RWVNTIKADGTFESRLVVEGWSQVPGIDYGGTFTPVCRLQSIRMMLAIAVE------------------LAYEIYM--------------------------------------------MGY-----DPCMYIYEDEVGFVFLTLYVDNLLVQGANKE---------------------------------------------------------YTDNIRERFGMTGCNPAYTPGVEPALSLNQPEEKLLDEKDNKRYQSITGAVMNLAQVSRYDIIFAVNQLARAMSKPSKAHMGAAKHLLRYLAGT-------------LVAYSDANLGNNRDNGKLTPSYIVMLAYGPVSFKLGLQSLNAQSTMEAELVAAALTMKEAVLCSSMMVELGFEKGFNSVPLYLDNTSTLHVAGNRTYSPRAKHIALRYVFVQEQVEEGMITIHYVNTQDQLANLGTKHLGKHR--HLARI---KPLNDFKA 1038
+WV KADGTF+ R+V +GW+QVPG+D G T+ PVCR+QS+RM+ I VE + E+++ +G+ DPC+Y+Y+ ++LTLYVD+LL+ G + + Y +I ERFGM+G P TPG +S QPE+ LLDEK+ ++YQ I G++M +AQV RYDI++A QLAR+M+KPSK HM AAKH LRYLAGT L +SD+N NN DNGK T SY+ MLA P+SF+ GLQ L A STMEAELVA+AL MKEAV CS+MM ELG K F +P+Y DNT+TLH GNR++S R KHIALR+ F++E V EG I+IHYV T+D LA++GTKH KHR HL + +N+F A
Sbjct: 180 KWVFKRKADGTFKGRVVAQGWNQVPGLDCGSTYAPVCRIQSVRMVACITVEFNLIFDQMDVSTAFLYADIQEEVFVEQPPGFEVKDKDGGDMVMKLNKSLYGLAQSPGNWFNTIDPVLVEIGFVALKSDPCVYLYDHNGAKIYLTLYVDDLLLAGNDSDAIKHLLSSGWKLGGIARQXGKLQKRFKMTDLGEASFALGMKIRRDREANTLTISQEAYCKSILERFGMSGSKPTSTPGYGSEISNIQPEDTLLDEKETRKYQGIVGSLMYIAQVLRYDIMYATGQLARSMAKPSKVHMVAAKHTLRYLAGTIDFSITYKKGGFKLATFSDSNWANNPDNGKSTSSYLTMLANAPMSFRSGLQGLTAMSTMEAELVASALAMKEAVFCSNMMTELGSGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYVPTEDNLADIGTKHFNKHRFKHLMDLINNLDVNEFTA 663
BLAST of mRNA_H-elongata_contig79140.15573.1 vs. uniprot
Match: A0A6H5KJH6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJH6_9PHAE) HSP 1 Score: 327 bits (837), Expect = 1.110e-97 Identity = 190/464 (40.95%), Postives = 252/464 (54.31%), Query Frame = 1
Query: 13 RWVNTIKADGTFESRLVVEGWSQVPGIDYGGTFTPVCRLQSIRMMLAIAVE------------------LAYEIYM--------------------------------------------MGY-----DPCMYIYEDEVGFVFLTLYVDNLLVQGANKE--------------------------------------------YTDNIRERFGMTGCNPAYTPGVEPALSLNQPEEKLLDEKDNKRYQSITGAVMNLAQVSRYDIIFAVNQLARAMSKPSKAHMGAAKHLLRYLAGT-------------LVAYSDANLGNNRDNGKLTPSYIVMLAYGPVSFKLGLQSLNAQSTMEAELVAAALTMKEAVLCSSMMVELGFEKGFNSVPLYLDNTSTLHVAGNRTYSPRAKHIALRYVFVQEQVEEGMITIHYVNTQDQLANLGTKHLGKHRHLARIKPLNDF 1032
+WV KADGTF+ R+V +GW+QVPG+D G T+ PVCR+QS+RM+ I VE + E+++ +G+ DPC+Y+Y+ ++LTLYVD+LL+ G + + Y +I ERFG++G P TPG +S QPE+ LLDEK+ ++YQ I G++M +AQV RYDI++A QLAR M+KPSK HM AAKH LRYLAGT L +SD+N NN DNGK T SY+ +LA P+SF+ GLQ L A STMEAELVA+AL M EAV S+MM ELGF K F +P+Y DNT+TLH GNR++S R KHIALR+ F++E V EG I+IHYV T+D LA++GTKH KHR + +N+F
Sbjct: 1201 KWVFKRKADGTFKGRVVAQGWNQVPGLDCGSTYAPVCRIQSVRMVACITVEFNLIFDQMDVSTAFLYADIQEEVFVEQPPGFEVKDKDGGDMVMKLNKSLYGLAQSPGNWFNTIDPVLVEIGFVALKSDPCVYLYDHNGAKIYLTLYVDDLLLAGNDSDAISMVKGKLQKRFKMTDLGEASLVLGMEIRRDREANTLTISQEAYCKSILERFGISGSKPTSTPGYGSEISNIQPEDTLLDEKETRKYQGIVGSLMYIAQVLRYDIMYATGQLARPMAKPSKVHMVAAKHTLRYLAGTIDFSITYKKGGFKLATFSDSNWANNPDNGKSTSSYLTVLANAPMSFRSGLQGLTAMSTMEAELVASALAMNEAVFFSNMMTELGFGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYVPTEDNLADIGTKHFNKHRFKHLMDLINNF 1664
BLAST of mRNA_H-elongata_contig79140.15573.1 vs. uniprot
Match: A0A6H5L5U2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5U2_9PHAE) HSP 1 Score: 297 bits (760), Expect = 2.170e-94 Identity = 161/336 (47.92%), Postives = 205/336 (61.01%), Query Frame = 1
Query: 196 DPCMYIYEDEVGFVFLTLYVDNLLVQGANKE--------------------------------------------YTDNIRERFGMTGCNPAYTPGVEPALSLNQPEEKLLDEKDNKRYQSITGAVMNLAQVSRYDIIFAVNQLARAMSKPSKAHMGAAKHLLRYLAGT-------------LVAYSDANLGNNRDNGKLTPSYIVMLAYGPVSFKLGLQSLNAQSTMEAELVAAALTMKEAVLCSSMMVELGFEKGFNSVPLYLDNTSTLHVAGNRTYSPRAKHIALRYVFVQEQVEEGMITIHYVNTQDQLANLGTKHLGKHRHLARIKPLNDF 1032
DPC+Y+Y+ ++LTLYVD+LL+ G + + Y +I ERFGM+G P TPG +S QPE+ LLDEK+ ++YQ I G++M +AQV RYDI++A QLAR M+KPSK HM AAKH LRYLAGT L +SD+N NN DNGK T SY+ MLA P+SF+ GLQ L A STMEAELVA+AL MKEAV CS+MM ELGF K F +P+Y DNT+TLH GNR++S R KHIALR+ F++E V EG I+IHY T+D LA++GTKH KHR + +N+F
Sbjct: 100 DPCVYLYDHNGAKIYLTLYVDDLLLAGNDSDAISMVKGKLQKRFKMTDLGEASLVLGMEIRRDREANTLTISQEAYCKSILERFGMSGSKPTSTPGYGSEISNIQPEDTLLDEKETRKYQGIVGSLMYIAQVLRYDIMYATGQLARPMAKPSKVHMVAAKHTLRYLAGTIDFSITYKKGGFKLATFSDSNWANNPDNGKSTSSYLTMLANAPMSFRSGLQGLTAMSTMEAELVASALAMKEAVFCSNMMTELGFGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYFPTEDNLADIGTKHFNKHRFEHLMDLINNF 435
BLAST of mRNA_H-elongata_contig79140.15573.1 vs. uniprot
Match: A0A6H5KBU1_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBU1_9PHAE) HSP 1 Score: 293 bits (749), Expect = 1.630e-87 Identity = 163/327 (49.85%), Postives = 211/327 (64.53%), Query Frame = 1
Query: 73 WSQVPGIDYGGTFTPVCRLQSIRMMLAIAVELAYEIYMMGYDPCMYIYEDEVGFVFLTLYVDNLLVQGANKEYTDNIRERFGMTGCNPAYTPGVEPALSLNQPEEKLLDEKDNKRYQSITGAVMNLAQVSRYDIIFAVNQLARAMSKPSKAHMGAAKHLLRYLAGT-------------LVAYSDANLGNNRDNGKLTPSYIVMLAYGPVSFKLGLQSLNAQSTMEAELVAAALTMKEAVLCSSMMVELGFEKGFNSVPLYLDNTSTLHVAGNRTYSPRAKHIALRYVFVQEQVEEGMITIHYVNTQDQLANLGTKHLGKHRHLARI 1014
W+QVPG D+GGTF PVCRLQSIRM+LAIA E ++ + + + F++ + D L + + Y ++I +RFGM P T G P LS +I G+V+ LAQ++RYDI++ +QLARAMS PSK HMGAAKHLLRYL+G+ L A SDAN GNN DN K SYI+M++ PVSFK GLQSL A ST+EAELVAAAL MKE + C++MM ELGF F S PLY+ NT+TLHV GN+T+S R KH+ALR+ +++E V+EG I+IHY+ T+D LA++GTKHL K RH I
Sbjct: 385 WNQVPGRDWGGTFAPVCRLQSIRMLLAIAAEKDLDVIQL---------DVKTAFLYADIEEDGELTN-SQENYPNSILDRFGMGSWKPLSTAGFGPELS------------------AIIGSVIYLAQITRYDIMYCASQLARAMSNPSKIHMGAAKHLLRYLSGSRDFSITYKRGGFDLTALSDANWGNNPDNRKSMSSYIMMMSKAPVSFKFGLQSLTAMSTLEAELVAAALAMKETIFCTNMMKELGFGSEFRSAPLYI-NTATLHVIGNQTFSGRTKHVALRFFYIREIVKEGRISIHYIPTEDNLADIGTKHLNKQRHQCLI 682
BLAST of mRNA_H-elongata_contig79140.15573.1 vs. uniprot
Match: A0A6H5JG39_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG39_9PHAE) HSP 1 Score: 268 bits (686), Expect = 3.230e-80 Identity = 138/267 (51.69%), Postives = 179/267 (67.04%), Query Frame = 1
Query: 277 ANKEYTDNIRERFGMTGCNPAYTPGVEPALSLNQPEEKLLDEKDNKRYQSITGAVMNLAQVSRYDIIFAVNQLARAMSKPSKAHMGAAKHLLRYLAGT-------------LVAYSDANLGNNRDNGKLTPSYIVMLAYGPVSFKLGLQSLNAQSTMEAELVAAALTMKEAVLCSSMMVELGFEKGFNSVPLYLDNTSTLHVAGNRTYSPRAKHIALRYVFVQEQVEEGMITIHYVNTQDQLANLGTKHLGKHRHLARIKPLNDFKA 1038
+ + Y+ +I +RFGM+ C P TPG+ P S QPEE LL++++ +RYQ I G ++ L+Q+ RYDI++A +QLAR M+KPSK HMGAAK RYLAGT L A++D+N GNN DNGK T S++ ML P++FK GLQSL QSTME ELVAAAL +KEAV CS+++ ELGF K VPLY DNT+TLH GNR+YS KHIALR+ F++E V EG I IHYV A++GTKHL K R + + +F
Sbjct: 454 SREAYSKSILDRFGMSACKPTSTPGLGPGPSNVQPEETLLNQEETRRYQGIVGCLIYLSQILRYDIMYATSQLARPMAKPSKNHMGAAKRTFRYLAGTTYFKIPYKRGGFKLTAFTDSNWGNNPDNGKSTSSHLTMLCDAPMAFKSGLQSLTTQSTMEVELVAAALAIKEAVFCSNILTELGFGKELAQVPLYGDNTATLHSLGNRSYSSTTKHIALRFFFIRELVSEGRIAIHYVPADSNPADIGTKHLNKDRFQLLLNIIKNFNV 720
BLAST of mRNA_H-elongata_contig79140.15573.1 vs. uniprot
Match: A0A6H5J6N1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J6N1_9PHAE) HSP 1 Score: 260 bits (664), Expect = 2.220e-79 Identity = 163/375 (43.47%), Postives = 207/375 (55.20%), Query Frame = 1
Query: 10 IRWVNTIKADGTFESRLVVEGWSQVPGIDYGGTFTPVCRLQSIRMMLAIAVELAYE------IYMMGYDP-----CMYIYEDEVGFVFLTLYVDNLLVQGANKE--------------------------------------------YTDNIRERFGMTGCNPAYTPGVEPALSLNQPEEKLLDEKDNKRYQSITGAVMNLAQVSRYDIIFAVNQLARAMSKPSKAHMGAAKHLLR--------YLAG--TLVAYSDANLGNNRDNGKLTPSYIVMLAYGPVSFKLGLQSLNAQSTMEAELVAAALTMKEAVLCSSMMVELGFEKGFNSVPLYLDNTSTLHVAGNRTYSPRAKHIALRYVFVQEQVEEGMITIH 939
I+ + +K D T+++RLV GW+QVP D GGTF PVCRLQS+RM+ AIA E+ +E + +G +P C+YIY+ V +TLYVD+L+V G N E YT +I RFGM C P P V LS QP E +L+++ + +QLAR MSK +KAHMGAAKHLLR Y G L A+SDAN +N DN + T SY++M++ PVSFK GLQ L STMEAEL+AAALTMKEAV CS+MM ELGF + F VPLY++NT+TLHV GN+ YS R KHIAL + V+E V+EG ITIH
Sbjct: 150 IKSLQELKRDCTYKARLVALGWNQVPEKDCGGTFAPVCRLQSVRMVFAIAAEMDWEKTIDLKLIELGCNPLKSDSCVYIYKRNHTIVIITLYVDDLVVIGGNIEVIEAIKTKLMEQFQMSVLGNVSLVLGMQVTRDGEHGTLTITQADYTRSILARFGMEECKPTSIPSVGSELSTEQPTETVLNKEKTQ------------------------SQLARVMSKAAKAHMGAAKHLLRGTQDFCITYKRGGFKLTAFSDANWESNPDNARSTSSYMIMMSKAPVSFKTGLQDLTVMSTMEAELLAAALTMKEAVFCSNMMTELGFGQQFGQVPLYINNTATLHVIGNQAYSSRTKHIALLFFCVRELVKEGAITIH 500
BLAST of mRNA_H-elongata_contig79140.15573.1 vs. uniprot
Match: A0A6H5KMK0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMK0_9PHAE) HSP 1 Score: 226 bits (577), Expect = 7.260e-70 Identity = 118/210 (56.19%), Postives = 144/210 (68.57%), Query Frame = 1
Query: 442 MNLAQVSRYDIIFAVNQLARAMSKPSKAHMGAAKHLLRYLAGT-------------LVAYSDANLGNNRDNGKLTPSYIVMLAYGPVSFKLGLQSLNAQSTMEAELVAAALTMKEAVLCSSMMVELGFEKGFNSVPLYLDNTSTLHVAGNRTYSPRAKHIALRYVFVQEQVEEGMITIHYVNTQDQLANLGTKHLGKHRHLARIKPLNDF 1032
M +AQV RYDI++A LAR M+KPSK H AK LRYLAGT L +SD+N NN DNGK T SY+ MLA P+SF+ GLQ L A STMEAELVA+AL MKEAV CS+MM ELGF K F +P+Y DNT+TLH GNR++S R KHIALR+ F++E V EG I+IHY T+D LA++GTKH KHR + +N+F
Sbjct: 1 MYIAQVLRYDIMYATGHLARPMAKPSKVHTVTAKQTLRYLAGTIDFSITYKKGGFKLATFSDSNWANNPDNGKSTSSYLTMLANAPMSFRSGLQGLTAMSTMEAELVASALAMKEAVFCSNMMTELGFGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYAPTEDNLAHIGTKHFNKHRFKHLMDRINNF 210
BLAST of mRNA_H-elongata_contig79140.15573.1 vs. uniprot
Match: A0A6H5JBV6_9PHAE (Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBV6_9PHAE) HSP 1 Score: 232 bits (591), Expect = 8.860e-65 Identity = 154/379 (40.63%), Postives = 200/379 (52.77%), Query Frame = 1
Query: 31 KADGTFESRLVVEGWSQVPGIDYGGTFTPVCRLQSIRMMLAIAVELAYEIYMM------------------------------GY-----DPCMYIYEDEVGFVFLTLYVDNLLVQGANKEYT-----DNIRERFGMTGCNPAYTPGVEPALSLNQPEEKLLDEKDNKRYQSITGAVMNLAQVSRYDIIFAVNQLARAMSKPSKAHMGAAKHLLRYLAGTLVAYSDANLGNNRDNGKLTPSYIVMLAYGPVSFKLGLQSLNAQSTMEAELVAAALTMKEAVLCSSMMVELGFEKGFNSVPLYLDNTSTLHVAGNRTYSPRAKHIALRYVFVQEQVEEGMITIHYVNTQDQLANLGTKHLGKH--RHLARIKP---LNDF 1032
KADG+F+ RLV +GW+QVPG+D+G T+ PVCRLQSI+M+ IAV+ E+ M G+ D C+Y+Y+ + V+LTLYV LL+ +NK +++RF T A L L E + I G +M +AQV RYDII + GT +SD N NN DNGK T Y ML + PVS K G+Q A STMEAEL+A+AL MKEAV CS+M+ ELGF K F VPLY DNT+TLH GNR++S R HIALR+ +++E V EG I+IHYV T LA++GTK+L KH +HL I +NDF
Sbjct: 857 KADGSFKGRLVAQGWNQVPGLDWGSTYAPVCRLQSIQMLACIAVQFNLELDQMDVSTAFLYADILENVFVEQPPGFEVKDKDRGFVPLKSDTCVYLYDHDDVQVYLTLYVYELLL-ASNKSNAISMIKKKLKQRFKSTDIGEA-------KLVLGM-------EIKGTATKGIVGCLMYIAQVLRYDIIITYKSEG-------------------FKLGT---FSDTNWANNPDNGKSTSCYWTMLEHAPVSLKSGIQGPAAISTMEAELIASALAMKEAVFCSNMLTELGFGKEFAQVPLYCDNTATLHALGNRSFSSRENHIALRFFYIRELVLEGRISIHYVPTDSNLADIGTKYLNKHWLKHLLDIISSFNVNDF 1198 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig79140.15573.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig79140.15573.1 >prot_H-elongata_contig79140.15573.1 ID=prot_H-elongata_contig79140.15573.1|Name=mRNA_H-elongata_contig79140.15573.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=347bp VVGIRWVNTIKADGTFESRLVVEGWSQVPGIDYGGTFTPVCRLQSIRMMLback to top mRNA from alignment at H-elongata_contig79140:30..1440- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig79140.15573.1 ID=mRNA_H-elongata_contig79140.15573.1|Name=mRNA_H-elongata_contig79140.15573.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1411bp|location=Sequence derived from alignment at H-elongata_contig79140:30..1440- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig79140:30..1440- >mRNA_H-elongata_contig79140.15573.1 ID=mRNA_H-elongata_contig79140.15573.1|Name=mRNA_H-elongata_contig79140.15573.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2082bp|location=Sequence derived from alignment at H-elongata_contig79140:30..1440- (Himanthalia elongata Himel1 dioecious)back to top |