mRNA_H-elongata_contig79140.15573.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig79140.15573.1
Unique NamemRNA_H-elongata_contig79140.15573.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig79140.15573.1 vs. uniprot
Match: A0A6H5KNH5_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNH5_9PHAE)

HSP 1 Score: 343 bits (879), Expect = 2.520e-106
Identity = 192/437 (43.94%), Postives = 249/437 (56.98%), Query Frame = 1
Query:   13 RWVNTIKADGTFESRLVVEGWSQVPGIDYGGTFTPVCRLQSIRMMLAIAVE-----------------LAYEIYMMGY-----------------------DPCMYIYEDEVGFVFLTLYVDNLLVQGANKE--------------------------------------------YTDNIRERFGMTGCNPAYTPGVEPALSLNQPEEKLLDEKDNKRYQSITGAVMNLAQVSRYDIIFAVNQLARAMSKPSKAHMGAAKHLLRYLAGT-------------LVAYSDANLGNNRDNGKLTPSYIVMLAYGPVSFKLGLQSLNAQSTMEAELVAAALTMKEAVLCSSMMVELGFEKGFNSVPLYLDNTSTLHVAGNRTYSPRAKHIALRYVFVQEQVEEGMITIHYVNTQDQLANLGTKHLGKHRHLARIKPLNDF 1032
            +WV   KADGTF+ R+V +GW+QVPG+D G T+ PVCR+QS+RM+  I V+                 L   +Y +                         DPC+Y+Y+     ++LTLYVD+LL+ G + +                                            Y  +I ERFGM+G  P  TPG    +S  QPE+ LLDEK+ ++YQ I G++M +AQV RYDI++A  QLAR M+KPSK HM AAKH LRYLAGT             L  +SD+N  NN DNGK T SY+ MLA  P+SF+ GLQ L A STMEAELVA+AL MKEAV CS+MM ELGF K F  +P+Y DNT+TLH  GNR++S R KHIALR+ F++E V EG I+IHYV T+D LA++GTKH   HR    +  +N+F
Sbjct:  559 KWVFKRKADGTFKGRVVAQGWNQVPGLDCGSTYAPVCRIQSVRMVACITVDFNLIFDQMDDGGDMVMKLNKSLYGLAQSPGNWFNTIDPVLVEIGFVALKSDPCVYLYDHNGAKIYLTLYVDDLLLAGNDSDAISMVKGKLQKRFKMTDLGEASLVLRMEIRRDREANTLTISQEAYCKSILERFGMSGSKPTSTPGYGSEISNIQPEDTLLDEKETRKYQGIVGSLMYIAQVLRYDIMYATGQLARPMAKPSKVHMVAAKHTLRYLAGTIDFSITYKKGGFKLATFSDSNWANNPDNGKSTSSYLTMLANAPMSFRSGLQGLTAMSTMEAELVASALAMKEAVFCSNMMTELGFGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYVRTEDNLADIGTKHFNNHRFKHLMDLINNF 995          
BLAST of mRNA_H-elongata_contig79140.15573.1 vs. uniprot
Match: A0A6H5L6R7_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6R7_9PHAE)

HSP 1 Score: 334 bits (856), Expect = 5.640e-105
Identity = 190/429 (44.29%), Postives = 256/429 (59.67%), Query Frame = 1
Query:    1 VVGIRWVNTIKADGTFESRLVVEGWSQVPGIDYGGTFTPVCRLQSIRMMLAIAVELAYEIYMM---------------------GY----------------------------------------------DPCMYIYEDEVGFVFLTLYVDNLLV--QGANKE---YTDNIRERFGMTGCNPAYTPGVEPALSLNQPEEKLLDEKDNKRYQSITGAVMNLAQVSRYDIIFAVNQLARAMSKPSKAHMGAAKHLLRYLAGT-------------LVAYSDANLGNNRDNGKLTPSYIVMLAYGPVSFKLGLQSLNAQSTMEAELVAAALTMKEAVLCSSMMVELGFEKGFNSVPLYLDNTSTLHVAGNRTYSPRAKHIALRYVFVQEQVEEGMITIHYVNTQDQLANLGTKHLGKHRHLARIKPLNDF 1032
            V+G +WV  +K + T ++RLV +GW+QVPG D GGTF PVCRLQSIRM+ AIA E   ++  +                     GY                                              D C+YIY+     V LTLYVD+LL+   GA+ +   YT +I +RFGM  C P  T G  P LS+ QPEE LL+ +  +RYQ+I G+VM LAQV+RYDI++  +Q ARAMS PSK HMGAAKHLLRYL+G+             L A S+AN G+N DNGK   SYI+M++  P S K GLQSL A ST+EAELVA+AL MKE + C++MM ELGF   F+S PL++D+T+TL+V GN+T+S   KH+ALR+ ++++ V+EG I+IHY+ T+D LA++GT++L K RH   I  + +F
Sbjct:  348 VIGSKWVFKVKPENTHKARLVAKGWNQVPGRDCGGTFAPVCRLQSIRMVFAIAAEKDLDVIQLDVKTAFLYADIEENVFVEMAPGYEAKNMEELQLVMKLEKSLDGLAQSPQDWLKTIDSSLVEIGFFPLKSDTCVYIYDHNNTVVVLTLYVDDLLIIRGGAHHQPGNYTTSILDRFGMGSCKPLSTAGFGPELSVKQPEETLLNAEGKQRYQAIIGSVMYLAQVTRYDIMYCASQFARAMSNPSKIHMGAAKHLLRYLSGSRDFSITYKRGGFDLTASSNANGGHNTDNGKSMSSYIMMMSTAPASLKSGLQSLTAMSTVEAELVASALAMKEVIFCTNMMKELGFGSEFSSAPLFIDSTATLNVIGNQTFSGHTKHMALRFFYIRKIVKEGRISIHYIPTEDNLADIGTEYLNKQRHQYLIDKIKNF 776          
BLAST of mRNA_H-elongata_contig79140.15573.1 vs. uniprot
Match: A0A6H5JME8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JME8_9PHAE)

HSP 1 Score: 327 bits (837), Expect = 2.450e-103
Identity = 196/484 (40.50%), Postives = 257/484 (53.10%), Query Frame = 1
Query:   13 RWVNTIKADGTFESRLVVEGWSQVPGIDYGGTFTPVCRLQSIRMMLAIAVE------------------LAYEIYM--------------------------------------------MGY-----DPCMYIYEDEVGFVFLTLYVDNLLVQGANKE---------------------------------------------------------YTDNIRERFGMTGCNPAYTPGVEPALSLNQPEEKLLDEKDNKRYQSITGAVMNLAQVSRYDIIFAVNQLARAMSKPSKAHMGAAKHLLRYLAGT-------------LVAYSDANLGNNRDNGKLTPSYIVMLAYGPVSFKLGLQSLNAQSTMEAELVAAALTMKEAVLCSSMMVELGFEKGFNSVPLYLDNTSTLHVAGNRTYSPRAKHIALRYVFVQEQVEEGMITIHYVNTQDQLANLGTKHLGKHR--HLARI---KPLNDFKA 1038
            +WV   KADGTF+ R+V +GW+QVPG+D G T+ PVCR+QS+RM+  I VE                  +  E+++                                            +G+     DPC+Y+Y+     ++LTLYVD+LL+ G + +                                                         Y  +I ERFGM+G  P  TPG    +S  QPE+ LLDEK+ ++YQ I G++M +AQV RYDI++A  QLAR+M+KPSK HM AAKH LRYLAGT             L  +SD+N  NN DNGK T SY+ MLA  P+SF+ GLQ L A STMEAELVA+AL MKEAV CS+MM ELG  K F  +P+Y DNT+TLH  GNR++S R KHIALR+ F++E V EG I+IHYV T+D LA++GTKH  KHR  HL  +     +N+F A
Sbjct:  180 KWVFKRKADGTFKGRVVAQGWNQVPGLDCGSTYAPVCRIQSVRMVACITVEFNLIFDQMDVSTAFLYADIQEEVFVEQPPGFEVKDKDGGDMVMKLNKSLYGLAQSPGNWFNTIDPVLVEIGFVALKSDPCVYLYDHNGAKIYLTLYVDDLLLAGNDSDAIKHLLSSGWKLGGIARQXGKLQKRFKMTDLGEASFALGMKIRRDREANTLTISQEAYCKSILERFGMSGSKPTSTPGYGSEISNIQPEDTLLDEKETRKYQGIVGSLMYIAQVLRYDIMYATGQLARSMAKPSKVHMVAAKHTLRYLAGTIDFSITYKKGGFKLATFSDSNWANNPDNGKSTSSYLTMLANAPMSFRSGLQGLTAMSTMEAELVASALAMKEAVFCSNMMTELGSGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYVPTEDNLADIGTKHFNKHRFKHLMDLINNLDVNEFTA 663          
BLAST of mRNA_H-elongata_contig79140.15573.1 vs. uniprot
Match: A0A6H5KJH6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJH6_9PHAE)

HSP 1 Score: 327 bits (837), Expect = 1.110e-97
Identity = 190/464 (40.95%), Postives = 252/464 (54.31%), Query Frame = 1
Query:   13 RWVNTIKADGTFESRLVVEGWSQVPGIDYGGTFTPVCRLQSIRMMLAIAVE------------------LAYEIYM--------------------------------------------MGY-----DPCMYIYEDEVGFVFLTLYVDNLLVQGANKE--------------------------------------------YTDNIRERFGMTGCNPAYTPGVEPALSLNQPEEKLLDEKDNKRYQSITGAVMNLAQVSRYDIIFAVNQLARAMSKPSKAHMGAAKHLLRYLAGT-------------LVAYSDANLGNNRDNGKLTPSYIVMLAYGPVSFKLGLQSLNAQSTMEAELVAAALTMKEAVLCSSMMVELGFEKGFNSVPLYLDNTSTLHVAGNRTYSPRAKHIALRYVFVQEQVEEGMITIHYVNTQDQLANLGTKHLGKHRHLARIKPLNDF 1032
            +WV   KADGTF+ R+V +GW+QVPG+D G T+ PVCR+QS+RM+  I VE                  +  E+++                                            +G+     DPC+Y+Y+     ++LTLYVD+LL+ G + +                                            Y  +I ERFG++G  P  TPG    +S  QPE+ LLDEK+ ++YQ I G++M +AQV RYDI++A  QLAR M+KPSK HM AAKH LRYLAGT             L  +SD+N  NN DNGK T SY+ +LA  P+SF+ GLQ L A STMEAELVA+AL M EAV  S+MM ELGF K F  +P+Y DNT+TLH  GNR++S R KHIALR+ F++E V EG I+IHYV T+D LA++GTKH  KHR    +  +N+F
Sbjct: 1201 KWVFKRKADGTFKGRVVAQGWNQVPGLDCGSTYAPVCRIQSVRMVACITVEFNLIFDQMDVSTAFLYADIQEEVFVEQPPGFEVKDKDGGDMVMKLNKSLYGLAQSPGNWFNTIDPVLVEIGFVALKSDPCVYLYDHNGAKIYLTLYVDDLLLAGNDSDAISMVKGKLQKRFKMTDLGEASLVLGMEIRRDREANTLTISQEAYCKSILERFGISGSKPTSTPGYGSEISNIQPEDTLLDEKETRKYQGIVGSLMYIAQVLRYDIMYATGQLARPMAKPSKVHMVAAKHTLRYLAGTIDFSITYKKGGFKLATFSDSNWANNPDNGKSTSSYLTVLANAPMSFRSGLQGLTAMSTMEAELVASALAMNEAVFFSNMMTELGFGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYVPTEDNLADIGTKHFNKHRFKHLMDLINNF 1664          
BLAST of mRNA_H-elongata_contig79140.15573.1 vs. uniprot
Match: A0A6H5L5U2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5U2_9PHAE)

HSP 1 Score: 297 bits (760), Expect = 2.170e-94
Identity = 161/336 (47.92%), Postives = 205/336 (61.01%), Query Frame = 1
Query:  196 DPCMYIYEDEVGFVFLTLYVDNLLVQGANKE--------------------------------------------YTDNIRERFGMTGCNPAYTPGVEPALSLNQPEEKLLDEKDNKRYQSITGAVMNLAQVSRYDIIFAVNQLARAMSKPSKAHMGAAKHLLRYLAGT-------------LVAYSDANLGNNRDNGKLTPSYIVMLAYGPVSFKLGLQSLNAQSTMEAELVAAALTMKEAVLCSSMMVELGFEKGFNSVPLYLDNTSTLHVAGNRTYSPRAKHIALRYVFVQEQVEEGMITIHYVNTQDQLANLGTKHLGKHRHLARIKPLNDF 1032
            DPC+Y+Y+     ++LTLYVD+LL+ G + +                                            Y  +I ERFGM+G  P  TPG    +S  QPE+ LLDEK+ ++YQ I G++M +AQV RYDI++A  QLAR M+KPSK HM AAKH LRYLAGT             L  +SD+N  NN DNGK T SY+ MLA  P+SF+ GLQ L A STMEAELVA+AL MKEAV CS+MM ELGF K F  +P+Y DNT+TLH  GNR++S R KHIALR+ F++E V EG I+IHY  T+D LA++GTKH  KHR    +  +N+F
Sbjct:  100 DPCVYLYDHNGAKIYLTLYVDDLLLAGNDSDAISMVKGKLQKRFKMTDLGEASLVLGMEIRRDREANTLTISQEAYCKSILERFGMSGSKPTSTPGYGSEISNIQPEDTLLDEKETRKYQGIVGSLMYIAQVLRYDIMYATGQLARPMAKPSKVHMVAAKHTLRYLAGTIDFSITYKKGGFKLATFSDSNWANNPDNGKSTSSYLTMLANAPMSFRSGLQGLTAMSTMEAELVASALAMKEAVFCSNMMTELGFGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYFPTEDNLADIGTKHFNKHRFEHLMDLINNF 435          
BLAST of mRNA_H-elongata_contig79140.15573.1 vs. uniprot
Match: A0A6H5KBU1_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBU1_9PHAE)

HSP 1 Score: 293 bits (749), Expect = 1.630e-87
Identity = 163/327 (49.85%), Postives = 211/327 (64.53%), Query Frame = 1
Query:   73 WSQVPGIDYGGTFTPVCRLQSIRMMLAIAVELAYEIYMMGYDPCMYIYEDEVGFVFLTLYVDNLLVQGANKEYTDNIRERFGMTGCNPAYTPGVEPALSLNQPEEKLLDEKDNKRYQSITGAVMNLAQVSRYDIIFAVNQLARAMSKPSKAHMGAAKHLLRYLAGT-------------LVAYSDANLGNNRDNGKLTPSYIVMLAYGPVSFKLGLQSLNAQSTMEAELVAAALTMKEAVLCSSMMVELGFEKGFNSVPLYLDNTSTLHVAGNRTYSPRAKHIALRYVFVQEQVEEGMITIHYVNTQDQLANLGTKHLGKHRHLARI 1014
            W+QVPG D+GGTF PVCRLQSIRM+LAIA E   ++  +         + +  F++  +  D  L   + + Y ++I +RFGM    P  T G  P LS                  +I G+V+ LAQ++RYDI++  +QLARAMS PSK HMGAAKHLLRYL+G+             L A SDAN GNN DN K   SYI+M++  PVSFK GLQSL A ST+EAELVAAAL MKE + C++MM ELGF   F S PLY+ NT+TLHV GN+T+S R KH+ALR+ +++E V+EG I+IHY+ T+D LA++GTKHL K RH   I
Sbjct:  385 WNQVPGRDWGGTFAPVCRLQSIRMLLAIAAEKDLDVIQL---------DVKTAFLYADIEEDGELTN-SQENYPNSILDRFGMGSWKPLSTAGFGPELS------------------AIIGSVIYLAQITRYDIMYCASQLARAMSNPSKIHMGAAKHLLRYLSGSRDFSITYKRGGFDLTALSDANWGNNPDNRKSMSSYIMMMSKAPVSFKFGLQSLTAMSTLEAELVAAALAMKETIFCTNMMKELGFGSEFRSAPLYI-NTATLHVIGNQTFSGRTKHVALRFFYIREIVKEGRISIHYIPTEDNLADIGTKHLNKQRHQCLI 682          
BLAST of mRNA_H-elongata_contig79140.15573.1 vs. uniprot
Match: A0A6H5JG39_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG39_9PHAE)

HSP 1 Score: 268 bits (686), Expect = 3.230e-80
Identity = 138/267 (51.69%), Postives = 179/267 (67.04%), Query Frame = 1
Query:  277 ANKEYTDNIRERFGMTGCNPAYTPGVEPALSLNQPEEKLLDEKDNKRYQSITGAVMNLAQVSRYDIIFAVNQLARAMSKPSKAHMGAAKHLLRYLAGT-------------LVAYSDANLGNNRDNGKLTPSYIVMLAYGPVSFKLGLQSLNAQSTMEAELVAAALTMKEAVLCSSMMVELGFEKGFNSVPLYLDNTSTLHVAGNRTYSPRAKHIALRYVFVQEQVEEGMITIHYVNTQDQLANLGTKHLGKHRHLARIKPLNDFKA 1038
            + + Y+ +I +RFGM+ C P  TPG+ P  S  QPEE LL++++ +RYQ I G ++ L+Q+ RYDI++A +QLAR M+KPSK HMGAAK   RYLAGT             L A++D+N GNN DNGK T S++ ML   P++FK GLQSL  QSTME ELVAAAL +KEAV CS+++ ELGF K    VPLY DNT+TLH  GNR+YS   KHIALR+ F++E V EG I IHYV      A++GTKHL K R    +  + +F  
Sbjct:  454 SREAYSKSILDRFGMSACKPTSTPGLGPGPSNVQPEETLLNQEETRRYQGIVGCLIYLSQILRYDIMYATSQLARPMAKPSKNHMGAAKRTFRYLAGTTYFKIPYKRGGFKLTAFTDSNWGNNPDNGKSTSSHLTMLCDAPMAFKSGLQSLTTQSTMEVELVAAALAIKEAVFCSNILTELGFGKELAQVPLYGDNTATLHSLGNRSYSSTTKHIALRFFFIRELVSEGRIAIHYVPADSNPADIGTKHLNKDRFQLLLNIIKNFNV 720          
BLAST of mRNA_H-elongata_contig79140.15573.1 vs. uniprot
Match: A0A6H5J6N1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J6N1_9PHAE)

HSP 1 Score: 260 bits (664), Expect = 2.220e-79
Identity = 163/375 (43.47%), Postives = 207/375 (55.20%), Query Frame = 1
Query:   10 IRWVNTIKADGTFESRLVVEGWSQVPGIDYGGTFTPVCRLQSIRMMLAIAVELAYE------IYMMGYDP-----CMYIYEDEVGFVFLTLYVDNLLVQGANKE--------------------------------------------YTDNIRERFGMTGCNPAYTPGVEPALSLNQPEEKLLDEKDNKRYQSITGAVMNLAQVSRYDIIFAVNQLARAMSKPSKAHMGAAKHLLR--------YLAG--TLVAYSDANLGNNRDNGKLTPSYIVMLAYGPVSFKLGLQSLNAQSTMEAELVAAALTMKEAVLCSSMMVELGFEKGFNSVPLYLDNTSTLHVAGNRTYSPRAKHIALRYVFVQEQVEEGMITIH 939
            I+ +  +K D T+++RLV  GW+QVP  D GGTF PVCRLQS+RM+ AIA E+ +E      +  +G +P     C+YIY+     V +TLYVD+L+V G N E                                            YT +I  RFGM  C P   P V   LS  QP E +L+++  +                        +QLAR MSK +KAHMGAAKHLLR        Y  G   L A+SDAN  +N DN + T SY++M++  PVSFK GLQ L   STMEAEL+AAALTMKEAV CS+MM ELGF + F  VPLY++NT+TLHV GN+ YS R KHIAL +  V+E V+EG ITIH
Sbjct:  150 IKSLQELKRDCTYKARLVALGWNQVPEKDCGGTFAPVCRLQSVRMVFAIAAEMDWEKTIDLKLIELGCNPLKSDSCVYIYKRNHTIVIITLYVDDLVVIGGNIEVIEAIKTKLMEQFQMSVLGNVSLVLGMQVTRDGEHGTLTITQADYTRSILARFGMEECKPTSIPSVGSELSTEQPTETVLNKEKTQ------------------------SQLARVMSKAAKAHMGAAKHLLRGTQDFCITYKRGGFKLTAFSDANWESNPDNARSTSSYMIMMSKAPVSFKTGLQDLTVMSTMEAELLAAALTMKEAVFCSNMMTELGFGQQFGQVPLYINNTATLHVIGNQAYSSRTKHIALLFFCVRELVKEGAITIH 500          
BLAST of mRNA_H-elongata_contig79140.15573.1 vs. uniprot
Match: A0A6H5KMK0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMK0_9PHAE)

HSP 1 Score: 226 bits (577), Expect = 7.260e-70
Identity = 118/210 (56.19%), Postives = 144/210 (68.57%), Query Frame = 1
Query:  442 MNLAQVSRYDIIFAVNQLARAMSKPSKAHMGAAKHLLRYLAGT-------------LVAYSDANLGNNRDNGKLTPSYIVMLAYGPVSFKLGLQSLNAQSTMEAELVAAALTMKEAVLCSSMMVELGFEKGFNSVPLYLDNTSTLHVAGNRTYSPRAKHIALRYVFVQEQVEEGMITIHYVNTQDQLANLGTKHLGKHRHLARIKPLNDF 1032
            M +AQV RYDI++A   LAR M+KPSK H   AK  LRYLAGT             L  +SD+N  NN DNGK T SY+ MLA  P+SF+ GLQ L A STMEAELVA+AL MKEAV CS+MM ELGF K F  +P+Y DNT+TLH  GNR++S R KHIALR+ F++E V EG I+IHY  T+D LA++GTKH  KHR    +  +N+F
Sbjct:    1 MYIAQVLRYDIMYATGHLARPMAKPSKVHTVTAKQTLRYLAGTIDFSITYKKGGFKLATFSDSNWANNPDNGKSTSSYLTMLANAPMSFRSGLQGLTAMSTMEAELVASALAMKEAVFCSNMMTELGFGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYAPTEDNLAHIGTKHFNKHRFKHLMDRINNF 210          
BLAST of mRNA_H-elongata_contig79140.15573.1 vs. uniprot
Match: A0A6H5JBV6_9PHAE (Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBV6_9PHAE)

HSP 1 Score: 232 bits (591), Expect = 8.860e-65
Identity = 154/379 (40.63%), Postives = 200/379 (52.77%), Query Frame = 1
Query:   31 KADGTFESRLVVEGWSQVPGIDYGGTFTPVCRLQSIRMMLAIAVELAYEIYMM------------------------------GY-----DPCMYIYEDEVGFVFLTLYVDNLLVQGANKEYT-----DNIRERFGMTGCNPAYTPGVEPALSLNQPEEKLLDEKDNKRYQSITGAVMNLAQVSRYDIIFAVNQLARAMSKPSKAHMGAAKHLLRYLAGTLVAYSDANLGNNRDNGKLTPSYIVMLAYGPVSFKLGLQSLNAQSTMEAELVAAALTMKEAVLCSSMMVELGFEKGFNSVPLYLDNTSTLHVAGNRTYSPRAKHIALRYVFVQEQVEEGMITIHYVNTQDQLANLGTKHLGKH--RHLARIKP---LNDF 1032
            KADG+F+ RLV +GW+QVPG+D+G T+ PVCRLQSI+M+  IAV+   E+  M                              G+     D C+Y+Y+ +   V+LTLYV  LL+  +NK          +++RF  T    A        L L         E      + I G +M +AQV RYDII                          +  GT   +SD N  NN DNGK T  Y  ML + PVS K G+Q   A STMEAEL+A+AL MKEAV CS+M+ ELGF K F  VPLY DNT+TLH  GNR++S R  HIALR+ +++E V EG I+IHYV T   LA++GTK+L KH  +HL  I     +NDF
Sbjct:  857 KADGSFKGRLVAQGWNQVPGLDWGSTYAPVCRLQSIQMLACIAVQFNLELDQMDVSTAFLYADILENVFVEQPPGFEVKDKDRGFVPLKSDTCVYLYDHDDVQVYLTLYVYELLL-ASNKSNAISMIKKKLKQRFKSTDIGEA-------KLVLGM-------EIKGTATKGIVGCLMYIAQVLRYDIIITYKSEG-------------------FKLGT---FSDTNWANNPDNGKSTSCYWTMLEHAPVSLKSGIQGPAAISTMEAELIASALAMKEAVFCSNMLTELGFGKEFAQVPLYCDNTATLHALGNRSFSSRENHIALRFFYIRELVLEGRISIHYVPTDSNLADIGTKYLNKHWLKHLLDIISSFNVNDF 1198          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig79140.15573.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KNH5_9PHAE2.520e-10643.94Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5L6R7_9PHAE5.640e-10544.29Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JME8_9PHAE2.450e-10340.50Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KJH6_9PHAE1.110e-9740.95Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L5U2_9PHAE2.170e-9447.92Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KBU1_9PHAE1.630e-8749.85CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JG39_9PHAE3.230e-8051.69Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5J6N1_9PHAE2.220e-7943.47Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KMK0_9PHAE7.260e-7056.19Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JBV6_9PHAE8.860e-6540.63Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig79140contigH-elongata_contig79140:30..1440 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score148.3
Seed ortholog evalue6.7e-33
Seed eggNOG ortholog3659.XP_004147195.1
Preferred nameMINPP1
KEGG rclassRC00002,RC00017,RC00078,RC02809,RC02889
KEGG koko:K03103,ko:K07204,ko:K13811
KEGG ReactionR00509,R00529,R03434,R04928,R04929,R09532
KEGG Pathwayko00010,ko00230,ko00261,ko00450,ko00562,ko00920,ko01100,ko01120,ko01130,ko04136,ko04138,ko04140,ko04150,ko04151,ko04152,ko04211,ko04213,ko04714,ko04910,ko05206,map00010,map00230,map00261,map00450,map00562,map00920,map01100,map01120,map01130,map04136,map04138,map04140,map04150,map04151,map04152,map04211,map04213,map04714,map04910,map05206
KEGG ModuleM00176
GOsGO:0001503,GO:0003674,GO:0003824,GO:0003993,GO:0004446,GO:0004721,GO:0005575,GO:0005576,GO:0005615,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005788,GO:0005829,GO:0005886,GO:0005975,GO:0005996,GO:0006006,GO:0006007,GO:0006066,GO:0006082,GO:0006464,GO:0006470,GO:0006793,GO:0006796,GO:0006797,GO:0006807,GO:0007154,GO:0007165,GO:0007275,GO:0007424,GO:0008150,GO:0008152,GO:0009056,GO:0009888,GO:0009897,GO:0009986,GO:0009987,GO:0012505,GO:0016020,GO:0016052,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019318,GO:0019320,GO:0019538,GO:0019637,GO:0019751,GO:0023052,GO:0030175,GO:0030282,GO:0030351,GO:0030352,GO:0031214,GO:0031224,GO:0031225,GO:0031226,GO:0031233,GO:0031344,GO:0031346,GO:0031362,GO:0031974,GO:0031982,GO:0032501,GO:0032502,GO:0034416,GO:0034417,GO:0035556,GO:0036211,GO:0042578,GO:0042995,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043230,GO:0043231,GO:0043233,GO:0043412,GO:0043436,GO:0043647,GO:0044087,GO:0044089,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044281,GO:0044282,GO:0044421,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044459,GO:0044464,GO:0046365,GO:0046658,GO:0048015,GO:0048017,GO:0048513,GO:0048518,GO:0048522,GO:0048731,GO:0048856,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051130,GO:0051489,GO:0051491,GO:0051716,GO:0051717,GO:0052743,GO:0052745,GO:0052826,GO:0052827,GO:0060491,GO:0060541,GO:0065007,GO:0070013,GO:0070062,GO:0071704,GO:0071944,GO:0098552,GO:0098858,GO:0101006,GO:0120025,GO:0120032,GO:0120034,GO:0120035,GO:0140096,GO:1901564,GO:1901575,GO:1901615,GO:1903561
EggNOG free text desc.bisphosphoglycerate 3-phosphatase activity
EggNOG OGsCOG2801@1,KOG0017@2759,KOG1382@1,KOG1382@2759
EC2.7.1.25,2.7.7.4,3.1.3.62,3.1.3.80
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko04131
Hectar predicted targeting categoryother localisation
Exons4
Model size1041
Cds size1041
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig79140.15573.1prot_H-elongata_contig79140.15573.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig79140 30..1440 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931196.0165365-CDS-H-elongata_contig79140:29..5001622931196.0165365-CDS-H-elongata_contig79140:29..500Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig79140 30..500 -
1691679737.0841773-CDS-H-elongata_contig79140:29..5001691679737.0841773-CDS-H-elongata_contig79140:29..500Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig79140 30..500 -
1622931196.0308282-CDS-H-elongata_contig79140:539..8251622931196.0308282-CDS-H-elongata_contig79140:539..825Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig79140 540..825 -
1691679737.0977516-CDS-H-elongata_contig79140:539..8251691679737.0977516-CDS-H-elongata_contig79140:539..825Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig79140 540..825 -
1622931196.0492544-CDS-H-elongata_contig79140:957..10491622931196.0492544-CDS-H-elongata_contig79140:957..1049Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig79140 958..1049 -
1691679737.106555-CDS-H-elongata_contig79140:957..10491691679737.106555-CDS-H-elongata_contig79140:957..1049Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig79140 958..1049 -
1622931196.0642107-CDS-H-elongata_contig79140:1248..14401622931196.0642107-CDS-H-elongata_contig79140:1248..1440Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig79140 1249..1440 -
1691679737.1154778-CDS-H-elongata_contig79140:1248..14401691679737.1154778-CDS-H-elongata_contig79140:1248..1440Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig79140 1249..1440 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig79140.15573.1

>prot_H-elongata_contig79140.15573.1 ID=prot_H-elongata_contig79140.15573.1|Name=mRNA_H-elongata_contig79140.15573.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=347bp
VVGIRWVNTIKADGTFESRLVVEGWSQVPGIDYGGTFTPVCRLQSIRMML
AIAVELAYEIYMMGYDPCMYIYEDEVGFVFLTLYVDNLLVQGANKEYTDN
IRERFGMTGCNPAYTPGVEPALSLNQPEEKLLDEKDNKRYQSITGAVMNL
AQVSRYDIIFAVNQLARAMSKPSKAHMGAAKHLLRYLAGTLVAYSDANLG
NNRDNGKLTPSYIVMLAYGPVSFKLGLQSLNAQSTMEAELVAAALTMKEA
VLCSSMMVELGFEKGFNSVPLYLDNTSTLHVAGNRTYSPRAKHIALRYVF
VQEQVEEGMITIHYVNTQDQLANLGTKHLGKHRHLARIKPLNDFKA*
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mRNA from alignment at H-elongata_contig79140:30..1440-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig79140.15573.1 ID=mRNA_H-elongata_contig79140.15573.1|Name=mRNA_H-elongata_contig79140.15573.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1411bp|location=Sequence derived from alignment at H-elongata_contig79140:30..1440- (Himanthalia elongata Himel1 dioecious)
GTAGTTGGTATTCGGTGGGTAAATACAATCAAGGCGGACGGTACATTTGA AAGCCGTCTGGTCGTGGAGGGATGGTCTCAAGTCCCCGGTATTGATTATG GGGGTACTTTCACTCCCGTCTGTAGGCTGCAAAGCATTCGCATGATGCTG GCGATTGCGGTAGAGCTAGCGTACGAAATTTACATGATGGGCGTCCAAAC ATTTTCTCAACGCTGATGTGGACGAGGAGTTTTTCGTCAATATGCCACCC GAGTACCAGTGCATCAACAAGGCTGGAGTTCCCTTGGTAATGAAACTTAA GAAAAACCTGTACTGACTTCGTCAAAGCCTCAAGAACTGGTTTGGTACGA TGGACCAGTGGCTCGGCGATATCGGATTTTGTCCGCTCAAGTATGACCCA TGCATGTACATTTACGAGGACGAGGTTGGCTTCGTTTTTCTGACGCTCTA CGTGGACAACCTCCTTGTGCAAGGTGCAAACAAGTAACAGCTGAACTAGC TCAAGAAGCAGCTGATGGGTCGGTTTGAGATGAAGGACATGGGTAACGTA TCGAGAATGCTCGGCATGAACGTTGCTCGTGACCGCCAAAAGGGGACAAT CATCATAAATCAAAGAGAGTATACGGATAATATACGCGAGCGATTTGGCA TGACGGGCTGCAACCCCGCGTATACGCCCGGTGTGGAACCAGCACTATCG CTGAACCAGCCAGAAGAAAAATTGCTCGACGAGAAGGACAACAAGCGTTA CCAATCCATCACAGGTGCAGTCATGAACCTTGCGCAGGTTTCTCGGTACG ACATCATTTTCGCCGTGAACCAGCTAGCTAGGGCAATGTCAAAGCCTTCA AAAGCCCACATGGGAGCGGCCAAGCACTTACTCCGCTATTTGGCGGGAAC CGTTAACTGCTCCATTATTTACAAGCGAGGAGGGTTCAAGCTTGTAGCTT ACTCTGACGCAAACTTGGGTAACAATCGAGATAATGGCAAGTTAACGCCG TCATATATCGTTATGCTCGCATATGGCCCCGTTAGCTTCAAGCTGGGCCT CCAAAGCCTAAACGCGCAATCCACAATGGAAGCGGAGCTTGTGGCAGCAG CGCTCACCATGAAGGAGGCAGTGCTCTGCTCTAGCATGATGGTCGAGCTA GGCTTCGAGAAAGGATTCAACAGCGTGCCGTTGTACCTTGACAACACTTC AACATTGCACGTCGCCGGCAATCGTACGTACTCCCCTCGGGCGAAACATA TTGCTCTGAGGTACGTCTTCGTTCAAGAACAAGTGGAGGAGGGCATGATC ACCATCCACTACGTGAACACCCAAGATCAACTTGCAAACCTGGGCACCAA ACATCTAGGCAAGCACCGTCACCTCGCCCGCATCAAACCCCTCAACGACT TTAAGGCCTGA
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Coding sequence (CDS) from alignment at H-elongata_contig79140:30..1440-

>mRNA_H-elongata_contig79140.15573.1 ID=mRNA_H-elongata_contig79140.15573.1|Name=mRNA_H-elongata_contig79140.15573.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2082bp|location=Sequence derived from alignment at H-elongata_contig79140:30..1440- (Himanthalia elongata Himel1 dioecious)
GTAGTTGGTATTCGGTGGGTAAATACAATCAAGGCGGACGGTACATTTGA
AAGCCGTCTGGTCGTGGAGGGATGGTCTCAAGTCCCCGGTATTGATTATG
GGGGTACTTTCACTCCCGTCTGTAGGCTGCAAAGCATTCGCATGATGCTG
GCGATTGCGGTAGAGCTAGCGTACGAAATTTACATGATGGGCGTAGTTGG
TATTCGGTGGGTAAATACAATCAAGGCGGACGGTACATTTGAAAGCCGTC
TGGTCGTGGAGGGATGGTCTCAAGTCCCCGGTATTGATTATGGGGGTACT
TTCACTCCCGTCTGTAGGCTGCAAAGCATTCGCATGATGCTGGCGATTGC
GGTAGAGCTAGCGTACGAAATTTACATGATGGGCTATGACCCATGCATGT
ACATTTACGAGGACGAGGTTGGCTTCGTTTTTCTGACGCTCTACGTGGAC
AACCTCCTTGTGCAAGGTGCAAACAATATGACCCATGCATGTACATTTAC
GAGGACGAGGTTGGCTTCGTTTTTCTGACGCTCTACGTGGACAACCTCCT
TGTGCAAGGTGCAAACAAAGAGTATACGGATAATATACGCGAGCGATTTG
GCATGACGGGCTGCAACCCCGCGTATACGCCCGGTGTGGAACCAGCACTA
TCGCTGAACCAGCCAGAAGAAAAATTGCTCGACGAGAAGGACAACAAGCG
TTACCAATCCATCACAGGTGCAGTCATGAACCTTGCGCAGGTTTCTCGGT
ACGACATCATTTTCGCCGTGAACCAGCTAGCTAGGGCAATGTCAAAGCCT
TCAAAAGCCCACATGGGAGCGGCCAAGCACTTACTCCGCTATTTGGCGGG
AACCAGAGTATACGGATAATATACGCGAGCGATTTGGCATGACGGGCTGC
AACCCCGCGTATACGCCCGGTGTGGAACCAGCACTATCGCTGAACCAGCC
AGAAGAAAAATTGCTCGACGAGAAGGACAACAAGCGTTACCAATCCATCA
CAGGTGCAGTCATGAACCTTGCGCAGGTTTCTCGGTACGACATCATTTTC
GCCGTGAACCAGCTAGCTAGGGCAATGTCAAAGCCTTCAAAAGCCCACAT
GGGAGCGGCCAAGCACTTACTCCGCTATTTGGCGGGAACCCTTGTAGCTT
ACTCTGACGCAAACTTGGGTAACAATCGAGATAATGGCAAGTTAACGCCG
TCATATATCGTTATGCTCGCATATGGCCCCGTTAGCTTCAAGCTGGGCCT
CCAAAGCCTAAACGCGCAATCCACAATGGAAGCGGAGCTTGTGGCAGCAG
CGCTCACCATGAAGGAGGCAGTGCTCTGCTCTAGCATGATGGTCGAGCTA
GGCTTCGAGAAAGGATTCAACAGCGTGCCGTTGTACCTTGACAACACTTC
AACATTGCACGTCGCCGGCAATCGTACGTACTCCCCTCGGGCGAAACATA
TTGCTCTGAGGTACGTCTTCGTTCAAGAACAAGTGGAGGAGGGCATGATC
ACCATCCACTACGTGAACACCCAAGATCAACTTGCAAACCTGGGCACCAA
ACATCTAGGCAAGCACCGTCACCTCGCCCGCATCAAACCCCTCAACGACT
TTAAGGCCTGACTTGTAGCTTACTCTGACGCAAACTTGGGTAACAATCGA
GATAATGGCAAGTTAACGCCGTCATATATCGTTATGCTCGCATATGGCCC
CGTTAGCTTCAAGCTGGGCCTCCAAAGCCTAAACGCGCAATCCACAATGG
AAGCGGAGCTTGTGGCAGCAGCGCTCACCATGAAGGAGGCAGTGCTCTGC
TCTAGCATGATGGTCGAGCTAGGCTTCGAGAAAGGATTCAACAGCGTGCC
GTTGTACCTTGACAACACTTCAACATTGCACGTCGCCGGCAATCGTACGT
ACTCCCCTCGGGCGAAACATATTGCTCTGAGGTACGTCTTCGTTCAAGAA
CAAGTGGAGGAGGGCATGATCACCATCCACTACGTGAACACCCAAGATCA
ACTTGCAAACCTGGGCACCAAACATCTAGGCAAGCACCGTCACCTCGCCC
GCATCAAACCCCTCAACGACTTTAAGGCCTGA
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