mRNA_H-elongata_contig78819.15550.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig78819.15550.1 vs. uniprot
Match: D7FMQ9_ECTSI (Aquarius intron-binding protein similar to aquarius n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMQ9_ECTSI) HSP 1 Score: 333 bits (854), Expect = 2.230e-101 Identity = 186/249 (74.70%), Postives = 194/249 (77.91%), Query Frame = 1
Query: 1 GKTDVAVQAISNLYHLFPNQRTIMLAHSNAALNDLFEKISEKNIDERHLLRLGAGERELREGTMKDFSKFGRVNYTLKRRLELLAEVQRLAESIEVEGDVGYTCETAEYFQLFHVTSRIERFEAELEQRKTAAKVARGKAPSARDAQGKPESGSKDDDRVEAVAEDDGGENIEGAVKELFPFNKFFVNAPAGDSLFGGKVE-EDIEVARGCFRHIGKMFEELADYRAFELLRSHSARSDYLLTKQVSYI 744
GKTDVAVQ ISNLYH FPNQRTIM+AHSNAALNDLFEKI EK+IDERHLLRLGAGERELRE TMKDFSKFGRVNYTLKRRLELLAEVQRLAE+I VEGDVGYT ETAEYFQLFHVTSRIERFEAELEQRK A + +P A G VKELFPF+ FF NAPAGD LFGG + ED+EVARGCFRHI KMFEELADYRAFELLRSHSARSDYLLTKQ I
Sbjct: 1478 GKTDVAVQVISNLYHSFPNQRTIMVAHSNAALNDLFEKIMEKDIDERHLLRLGAGERELREDTMKDFSKFGRVNYTLKRRLELLAEVQRLAETIGVEGDVGYTGETAEYFQLFHVTSRIERFEAELEQRKPTAPPSATASPEXXXXXXXXXXXXXXXXXXXAA----------GVVKELFPFHGFFANAPAGDKLFGGVDDGEDLEVARGCFRHISKMFEELADYRAFELLRSHSARSDYLLTKQARII 1716
BLAST of mRNA_H-elongata_contig78819.15550.1 vs. uniprot
Match: A0A812WMS1_SYMMI (AQR protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812WMS1_SYMMI) HSP 1 Score: 215 bits (548), Expect = 6.750e-66 Identity = 120/259 (46.33%), Postives = 158/259 (61.00%), Query Frame = 1
Query: 1 GKTDVAVQAISNLYHLFPNQRTIMLAHSNAALNDLFEKISEKNIDERHLLRLGAGERELREGTMK-----------DFSKFGRVNYTLKRRLELLAEVQRLAESIEVEGDVGYTCETAEYFQLFHVTSRIERFEAELEQRKTAAKVARGKAPSARDAQGKPESGSKDDDRVEAVAEDDGGENIEGAVKELFPFNKFFVNAPAGDSLFGGKVEEDIEVARGCFRHIGKMFEELADYRAFELLRSHSARSDYLLTKQVSYI 744
GKTDVAVQ I NLYH +P Q+ +++AHSN ALND+FEKI E+++D RHLLRLG+GE+ L +G + FSK GRVN++L RR +LL ++Q LA S++V GDVGYTCETAEYF L H+ +RIE+F A++ R GG++ V E+FPF+ +F +AP LF G ++DI+VA GCFRH+ F EL DYRAFELLR+ + R DYLLTKQ +
Sbjct: 27 GKTDVAVQIICNLYHNYPTQKILVIAHSNTALNDVFEKIMERDVDPRHLLRLGSGEKTLLQGKAQGRGTDAAGEEDQFSKQGRVNWSLARRSQLLQQIQYLASSLDVAGDVGYTCETAEYFFLEHIQARIEKFHADIHAR--------------------------------------GGDSA-NTVAEVFPFSNYFASAP--QPLFTGSFQDDIDVAEGCFRHLRNAFTELGDYRAFELLRTQAHRGDYLLTKQARIV 244
BLAST of mRNA_H-elongata_contig78819.15550.1 vs. uniprot
Match: UPI0005298EFD (intron-binding protein aquarius-like n=1 Tax=Colius striatus TaxID=57412 RepID=UPI0005298EFD) HSP 1 Score: 216 bits (549), Expect = 8.570e-65 Identity = 130/249 (52.21%), Postives = 155/249 (62.25%), Query Frame = 1
Query: 1 GKTDVAVQAISNLYHLFPNQRTIMLAHSNAALNDLFEKISEKNIDERHLLRLGAGERELREGTMKDFSKFGRVNYTLKRRLELLAEVQRLAESIEVEGDVGYTCETAEYFQLFHVTSRIERFEAELEQRKTAAKVARGKAPSARDAQGKPESGSKDDDRVEAVAEDDGGENIEGAVKELFPFNKFFVNAPAGDSLFGGK-VEEDIEVARGCFRHIGKMFEELADYRAFELLRSHSARSDYLLTKQVSYI 744
GKTDVAVQ ISNLYH FP QRT+++ HSN ALN LFEKI +IDERHLLRLG GE EL T KDFS++GRVNY L RRLELL EV RL ES+ V GDV YTCETA +F L+ V SR E + +++ KV GK P A D V LFPF+++F NAP +F GK EED+E+A GCFRH+ K+F +L ++RAFELLRS RS YLL K+ I
Sbjct: 161 GKTDVAVQIISNLYHNFPEQRTLIVTHSNQALNQLFEKIMALDIDERHLLRLGHGEEELE--TEKDFSRYGRVNYVLARRLELLQEVGRLQESLGVPGDVSYTCETAGHFFLYQVMSRWEEYISKV-------KVKGGKFPDATD------------------------------VSSLFPFHQYFANAP--QPIFKGKSYEEDMEIAEGCFRHLKKIFTQLEEFRAFELLRSGLDRSKYLLVKEAKII 368
BLAST of mRNA_H-elongata_contig78819.15550.1 vs. uniprot
Match: A0A835YIG8_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIG8_9STRA) HSP 1 Score: 218 bits (556), Expect = 9.020e-63 Identity = 136/265 (51.32%), Postives = 161/265 (60.75%), Query Frame = 1
Query: 1 GKTDVAVQAISNLYHLFP-NQRTIMLAHSNAALNDLFEKISEKNIDERHLLRLGAGERELREGTMKDFSKFGRVNYTLKRRLELLAEVQRLAE----SIEVEGD------------VGYTCETAEYFQLFHVTSRIERFEAELEQRKTAAKVARGKAPSARDAQGKPESGSKDDDRVEAVAEDDGGENIEGAVKELFPFNKFFVNAPAGDSLFGGKVEEDIEVARGCFRHIGKMFEELADYRAFELLRSHSARSDYLLTKQVSYI 744
GKTDVAVQ I+NLYHL RT+++AHSNAALNDLFEKI E++IDERHLLRLGAGE+EL T KDFSK GRVNYTL RRL+LL EV RLA S+ EG G++CETA +FQL+HVTSRIE FEAE +A P D AV LFPF KFF +AP +D+ +ARGCFRH+ ++FEELA+YRAFELLR+ SAR+DYLLTKQ +
Sbjct: 174 GKTDVAVQIIANLYHLGQAGHRTLLVAHSNAALNDLFEKIMERDIDERHLLRLGAGEKEL--ATSKDFSKAGRVNYTLSRRLKLLEEVSRLASTLTLSLATEGAEGAGGPAGLAEAAGHSCETAAHFQLYHVTSRIEAFEAE---------IAAQPQPLPAD-----------------------------AVARLFPFAKFFSDAPVQPLFEQKDGAKDLSIARGCFRHLARVFEELAEYRAFELLRTQSARADYLLTKQARVV 398
BLAST of mRNA_H-elongata_contig78819.15550.1 vs. uniprot
Match: A0A7S2C5H4_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C5H4_9STRA) HSP 1 Score: 216 bits (550), Expect = 9.900e-63 Identity = 125/251 (49.80%), Postives = 162/251 (64.54%), Query Frame = 1
Query: 1 GKTDVAVQAISNLYHLFPNQRTIMLAHSNAALNDLFEKISEKNIDERHLLRLGAGERELREGTM-KDFSKFGRVNYTLKRRLELLAEVQRLAESIEVEGDVGYTCETAEYFQLFHVTSRIERFEAELEQRKTAAKVARGKAPSARDAQGKPESGSKDDDRVEAVAEDDGGENIEGAVKELFPFNKFFVNAPAGDSLFGGKVEED------IEVARGCFRHIGKMFEELADYRAFELLRSHSARSDYLLTKQ 732
GKTDVAVQ I+N+YH P Q+T+++ HSNAALNDLF+KI E+++ ERH+LRLGAG +L E T +DFSKFGRVN+TL RR ELL +VQRLA S+ ++GD YTCE AE+F L+H+TSR+E+FEAE+ + A D+ E + LFPF FF +AP D++F + E ++VARGCFRHI K+FEEL D+RAFELLR+H RS+YLL KQ
Sbjct: 22 GKTDVAVQIIANIYHNCPTQKTLIITHSNAALNDLFQKIMERDVLERHMLRLGAGVEKLAEHTGGRDFSKFGRVNFTLARREELLDQVQRLASSLGIQGD-AYTCEAAEFFDLYHITSRVEKFEAEV---------------------------------AKLQAADNAEELTALKIVSLFPFANFFSDAPH-DAMFEPTLGESNDVIKALDVARGCFRHIHKVFEELKDFRAFELLRNHRMRSNYLLLKQ 237
BLAST of mRNA_H-elongata_contig78819.15550.1 vs. uniprot
Match: UPI001C71CA01 (RNA helicase aquarius-like n=1 Tax=Parasteatoda tepidariorum TaxID=114398 RepID=UPI001C71CA01) HSP 1 Score: 209 bits (532), Expect = 4.640e-62 Identity = 126/249 (50.60%), Postives = 153/249 (61.45%), Query Frame = 1
Query: 1 GKTDVAVQAISNLYHLFPNQRTIMLAHSNAALNDLFEKISEKNIDERHLLRLGAGERELREGTMKDFSKFGRVNYTLKRRLELLAEVQRLAESIEVEGDVGYTCETAEYFQLFHVTSRIERFEAELEQRKTAAKVARGKAPSARDAQGKPESGSKDDDRVEAVAEDDGGENIEGAVKELFPFNKFFVNAPAGDSLFGGKV-EEDIEVARGCFRHIGKMFEELADYRAFELLRSHSARSDYLLTKQVSYI 744
GKTDVAVQ ISNLYH FPNQRT+++ HSN ALN LFEKI +IDERHLLRLG GE L T KDFS++GRVNY L +RLELL V++L ES+ V GDV YTCETA +F ++HV +R E F +++ K RGK + V + FPF+KFF AP LF GK EEDIE+A GCFR+I K+F +L ++RAFELLRS RS YLL K+ I
Sbjct: 115 GKTDVAVQIISNLYHNFPNQRTLIVTHSNQALNQLFEKIMALDIDERHLLRLGHGEEALE--TEKDFSRYGRVNYVLAKRLELLDHVRKLQESLGVSGDVSYTCETAGHFFMYHVLARWEEFLSKV-------KPGRGKKVAL------------------------------NLVADCFPFSKFFEKAP--QPLFKGKTYEEDIEIAEGCFRYIKKIFSQLEEFRAFELLRSGLDRSQYLLVKEAKII 322
BLAST of mRNA_H-elongata_contig78819.15550.1 vs. uniprot
Match: A0A443SL56_9ACAR (Intron-binding protein aquarius-like protein (Fragment) n=1 Tax=Leptotrombidium deliense TaxID=299467 RepID=A0A443SL56_9ACAR) HSP 1 Score: 219 bits (557), Expect = 1.590e-61 Identity = 127/249 (51.00%), Postives = 159/249 (63.86%), Query Frame = 1
Query: 1 GKTDVAVQAISNLYHLFPNQRTIMLAHSNAALNDLFEKISEKNIDERHLLRLGAGERELREGTMKDFSKFGRVNYTLKRRLELLAEVQRLAESIEVEGDVGYTCETAEYFQLFHVTSRIERFEAELEQRKTAAKVARGKAPSARDAQGKPESGSKDDDRVEAVAEDDGGENIEGAVKELFPFNKFFVNAPAGDSLFG-GKVEEDIEVARGCFRHIGKMFEELADYRAFELLRSHSARSDYLLTKQVSYI 744
GKTDVAVQ ISN+YH FPNQRT+++ HSN ALN LFEKI +IDERHLLRLG GE EL T KDFS++GRVNY LK+RLELL +VQRLAES E GDV YTCETA YF L+HV SR E + +++ + KDD + V++LFPF K+F +AP LF K EED+E+A+GC+RHI K+F +L +++AFE+LRS S RS YLL ++ I
Sbjct: 689 GKTDVAVQIISNIYHNFPNQRTLIVTHSNQALNQLFEKIIALDIDERHLLRLGHGEEELE--TEKDFSRYGRVNYVLKKRLELLNQVQRLAESFEAAGDVAYTCETASYFFLYHVLSRWEEYMSKIYDK-------------------------KDDPTI---------------VQKLFPFTKYFEDAP--QPLFKCEKFEEDLEIAKGCYRHIKKIFTQLDEFKAFEMLRSGSDRSRYLLVREAKII 893
BLAST of mRNA_H-elongata_contig78819.15550.1 vs. uniprot
Match: UPI001C9D1E7C (RNA helicase aquarius n=1 Tax=Venturia canescens TaxID=32260 RepID=UPI001C9D1E7C) HSP 1 Score: 218 bits (556), Expect = 2.180e-61 Identity = 133/251 (52.99%), Postives = 157/251 (62.55%), Query Frame = 1
Query: 1 GKTDVAVQAISNLYHLFPNQRTIMLAHSNAALNDLFEKISEKNIDERHLLRLGAGERELREGTMKDFSKFGRVNYTLKRRLELLAEVQRLAESIEVEGDVGYTCETAEYFQLFHVTSRIERFEAELEQRKTAAKVARGKAPSARDAQGKPESGSKDDDRVEAVAEDDGGEN--IEGAVKELFPFNKFFVNAPAGDSLFGGK-VEEDIEVARGCFRHIGKMFEELADYRAFELLRSHSARSDYLLTKQVSYI 744
GKTDVAVQ ISNLYH FPNQRT+++ HSN ALN LFEKI +IDERHLLRLG GE L T KDFS++GRVNY L +RL+LL EVQRL ES+ V+GDV YTCETA +F + V+SR ERFEA LEQR GG+N + V E FPF+KFF NAP LF K EED+E+AR CFR+I + F +L ++RAFELLRS RS YLL K+ I
Sbjct: 825 GKTDVAVQIISNLYHNFPNQRTLIVTHSNQALNQLFEKIMALDIDERHLLRLGHGEEALE--TEKDFSRYGRVNYVLAKRLDLLMEVQRLQESLNVKGDVAYTCETAGHFFMDQVSSRWERFEARLEQR-------------------------------------GGGKNSALASLVDEEFPFHKFFDNAP--QPLFKRKDYEEDLEIARSCFRYIERTFTQLEEFRAFELLRSGLDRSKYLLVKEAKVI 1034
BLAST of mRNA_H-elongata_contig78819.15550.1 vs. uniprot
Match: A0A0Q3MP80_AMAAE (Uncharacterized protein n=5 Tax=Neognathae TaxID=8825 RepID=A0A0Q3MP80_AMAAE) HSP 1 Score: 212 bits (539), Expect = 4.600e-61 Identity = 127/249 (51.00%), Postives = 152/249 (61.04%), Query Frame = 1
Query: 1 GKTDVAVQAISNLYHLFPNQRTIMLAHSNAALNDLFEKISEKNIDERHLLRLGAGERELREGTMKDFSKFGRVNYTLKRRLELLAEVQRLAESIEVEGDVGYTCETAEYFQLFHVTSRIERFEAELEQRKTAAKVARGKAPSARDAQGKPESGSKDDDRVEAVAEDDGGENIEGAVKELFPFNKFFVNAPAGDSLFGGK-VEEDIEVARGCFRHIGKMFEELADYRAFELLRSHSARSDYLLTKQVSYI 744
GKTDVAVQ ISNLYH FP QRT+++ HSN ALN LFEKI +IDERHLLRLG GE EL T KDFS++GRVNY L RRLELL EV RL ES+ V GDV YTCETA +F L+ V SR E + +++ K GK P D V FPF+++F NAP +F GK EED+E+A GCFRH+ K+F +L ++RAFELLRS RS YLL K+ I
Sbjct: 11 GKTDVAVQIISNLYHNFPEQRTLIVTHSNQALNQLFEKIMALDIDERHLLRLGHGEEELE--TEKDFSRYGRVNYVLARRLELLREVGRLQESLGVPGDVSYTCETAGHFFLYQVMSRWEEYISKV-------KAKGGKVPDVTD------------------------------VSSFFPFHQYFANAP--QPVFKGKSYEEDMEIAEGCFRHVKKIFTQLEEFRAFELLRSGLDRSKYLLVKEAKII 218
BLAST of mRNA_H-elongata_contig78819.15550.1 vs. uniprot
Match: V9KHE5_CALMI (Intron-binding protein aquarius-like protein (Fragment) n=1 Tax=Callorhinchus milii TaxID=7868 RepID=V9KHE5_CALMI) HSP 1 Score: 215 bits (547), Expect = 4.880e-61 Identity = 131/249 (52.61%), Postives = 156/249 (62.65%), Query Frame = 1
Query: 1 GKTDVAVQAISNLYHLFPNQRTIMLAHSNAALNDLFEKISEKNIDERHLLRLGAGERELREGTMKDFSKFGRVNYTLKRRLELLAEVQRLAESIEVEGDVGYTCETAEYFQLFHVTSRIERFEAELEQRKTAAKVARGKAPSARDAQGKPESGSKDDDRVEAVAEDDGGENIEGAVKELFPFNKFFVNAPAGDSLFGGK-VEEDIEVARGCFRHIGKMFEELADYRAFELLRSHSARSDYLLTKQVSYI 744
GKTDVAVQ ISNLYH FP QRT+++ HSN ALN LFEKI +IDERHLLRLG GE EL T KDFS++GRVNY L RRLELL EV RL ES+EV GDV YTCETA +F L+ V SR E + +KV K +SG+ D AV +LFPF+K+F NAP +F + EED+E+A GCFRHI K+F +L ++RAFELLRS RS YLL K+ I
Sbjct: 569 GKTDVAVQIISNLYHNFPEQRTLIVTHSNQALNQLFEKIMALDIDERHLLRLGHGEEELE--TEKDFSRYGRVNYVLARRLELLREVGRLQESLEVHGDVSYTCETAGHFYLYQVMSRWEEY---------LSKV-------------KAKSGTSGDVT---------------AVSKLFPFHKYFANAP--QPIFKSQSYEEDMEIAEGCFRHINKIFTQLEEFRAFELLRSGLDRSKYLLVKEAKII 776 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig78819.15550.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig78819.15550.1 >prot_H-elongata_contig78819.15550.1 ID=prot_H-elongata_contig78819.15550.1|Name=mRNA_H-elongata_contig78819.15550.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=252bp GKTDVAVQAISNLYHLFPNQRTIMLAHSNAALNDLFEKISEKNIDERHLLback to top mRNA from alignment at H-elongata_contig78819:125..2664- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig78819.15550.1 ID=mRNA_H-elongata_contig78819.15550.1|Name=mRNA_H-elongata_contig78819.15550.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2540bp|location=Sequence derived from alignment at H-elongata_contig78819:125..2664- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig78819:125..2664- >mRNA_H-elongata_contig78819.15550.1 ID=mRNA_H-elongata_contig78819.15550.1|Name=mRNA_H-elongata_contig78819.15550.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1512bp|location=Sequence derived from alignment at H-elongata_contig78819:125..2664- (Himanthalia elongata Himel1 dioecious)back to top |