mRNA_H-elongata_contig78440.15513.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig78440.15513.1 vs. uniprot
Match: A0A6H5JBJ7_9PHAE (DDE-1 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBJ7_9PHAE) HSP 1 Score: 311 bits (797), Expect = 3.250e-104 Identity = 156/252 (61.90%), Postives = 184/252 (73.02%), Query Frame = 1
Query: 1 LSFGVQENSWCDARECTLWISESWRLRLINGSIITQRPSILVLDDFKCHRDEAFIADLRKRCNTSVILIPGGLTRLLQPQDRMLNKQMK*LLRGKYTAYTAAAVADPTTGKLRPLGRGMVPTWCKEACAAITPGVVKTCFKICGITVAFDGSEDNAWCMHTFGEGYRELLQKQRVAWKEAHPGVSLPPLQLLEVADGESIGTNPITAA*KEIQGRLLPLTGGKESDSDVELLEYDIDLACLGVSGGGEKEGE 756
+SFGVQE SW D REC WIS SW+LR NGSII QR ILVLDDFKCH+ E FIA L++ NT VI IPGG T LLQP DRMLNKQMK LLRGKYTAY+A+AVAD +GKL+P RG+V TWCK+A +ITP VKTCFKICG+T+A DGSED+AWC H FGE YR+LL++Q W HP V+LPPL+L +V G +NPITAA KE++G+LLP ESDS+VE+ E GGG+ EGE
Sbjct: 1 MSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIIQQRLCILVLDDFKCHKGEGFIAPLKRDANTIVIFIPGGWTPLLQPLDRMLNKQMKRLLRGKYTAYSASAVADARSGKLKPPERGVVSTWCKKAWESITPETVKTCFKICGLTLALDGSEDHAWCEHNFGEDYRDLLEEQHAVWLAEHPDVTLPPLKLPKVPGG--FDSNPITAAQKEVEGKLLPYVAD-ESDSEVEVSEXXXXXXXXXXQGGGDAEGE 249
BLAST of mRNA_H-elongata_contig78440.15513.1 vs. uniprot
Match: A0A6H5K6L9_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6L9_9PHAE) HSP 1 Score: 309 bits (791), Expect = 2.680e-100 Identity = 156/252 (61.90%), Postives = 183/252 (72.62%), Query Frame = 1
Query: 1 LSFGVQENSWCDARECTLWISESWRLRLINGSIITQRPSILVLDDFKCHRDEAFIADLRKRCNTSVILIPGGLTRLLQPQDRMLNKQMK*LLRGKYTAYTAAAVADPTTGKLRPLGRGMVPTWCKEACAAITPGVVKTCFKICGITVAFDGSEDNAWCMHTFGEGYRELLQKQRVAWKEAHPGVSLPPLQLLEVADGESIGTNPITAA*KEIQGRLLPLTGGKESDSDVELLEYDIDLACLGVSGGGEKEGE 756
+SFGVQE SW D REC WIS SW+LR NGSI+ QRP ILVLDDFKCH+DE FIA L++ NT VI IPG LT LLQP DRMLNKQMK LLR KYTAY+A+AVAD +GKL+P RG+V TWCKEA + TP VKTCF ICG+T+A DGSED+AWC H FGE YR+LL++QR W H V+LPPL+L +V G +NPITAA KE++G+LLP ESDS+VE+LE GGG EGE
Sbjct: 217 MSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRDANTIVIFIPGRLTPLLQPLDRMLNKQMKRLLRRKYTAYSASAVADARSGKLKPPERGVVSTWCKEAWESSTPETVKTCFMICGLTLALDGSEDHAWCEHNFGEDYRDLLEEQRAVWLAEHADVTLPPLKLPKVPGG--FDSNPITAAQKEVEGKLLPYVAD-ESDSEVEVLEGXXXXXXXXXQGGGGAEGE 465
BLAST of mRNA_H-elongata_contig78440.15513.1 vs. uniprot
Match: A0A6H5KQK9_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQK9_9PHAE) HSP 1 Score: 304 bits (778), Expect = 6.270e-100 Identity = 153/251 (60.96%), Postives = 181/251 (72.11%), Query Frame = 1
Query: 1 LSFGVQENSWCDARECTLWISESWRLRLINGSIITQRPSILVLDDFKCHRDEAFIADLRKRCNTSVILIPGGLTRLLQPQDRMLNKQMK*LLRGKYTAYTAAAVADPTTGKLRPLGRGMVPTWCKEACAAITPGVVKTCFKICGITVAFDGSEDNAWCMHTFGEGYRELLQKQRVAWKEAHPGVSLPPLQLLEVADGESIGTNPITAA*KEIQGRLLPLTGGKESDSDVELLEYDIDLACLGVSGGGEKEG 753
+SFGVQE SW D REC WIS SW+LR NGSI+ QRP ILVLDD KCH+ E FIA L++ NT VI IPGGLT LLQP DRMLNKQMK LLRGKYTAY+ +AVAD +GKL+P RG+V TWCKEA +ITP VK+CFKICG+T+A DGSED+AWC H FGE +LL++Q W HP V+LPPL+L +V G +NPITAA KE++G+LLP ESDS+VE+LE GGG EG
Sbjct: 98 MSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPCILVLDDVKCHKYEGFIAALKRDANTMVIFIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYSTSAVADARSGKLKPPERGVVSTWCKEAWESITPETVKSCFKICGLTLALDGSEDHAWCDHDFGEDSHDLLEEQHAVWLAEHPDVTLPPLKLPKVPGG--FDSNPITAAQKEVEGKLLPYVAD-ESDSEVEVLEGXXXXXXXXXQGGGGAEG 345
BLAST of mRNA_H-elongata_contig78440.15513.1 vs. uniprot
Match: A0A6H5L8W0_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8W0_9PHAE) HSP 1 Score: 297 bits (760), Expect = 3.740e-98 Identity = 149/252 (59.13%), Postives = 179/252 (71.03%), Query Frame = 1
Query: 1 LSFGVQENSWCDARECTLWISESWRLRLINGSIITQRPSILVLDDFKCHRDEAFIADLRKRCNTSVILIPGGLTRLLQPQDRMLNKQMK*LLRGKYTAYTAAAVADPTTGKLRPLGRGMVPTWCKEACAAITPGVVKTCFKICGITVAFDGSEDNAWCMHTFGEGYRELLQKQRVAWKEAHPGVSLPPLQLLEVADGESIGTNPITAA*KEIQGRLLPLTGGKESDSDVELLEYDIDLACLGVSGGGEKEGE 756
+SFGVQE SW D REC WIS SW+ R NGSI+ QRP ILVLDDFKC +DE FIA L++ NT I IPGGLT LLQP DR+LNKQMK +LRGKYTAY+A+AVAD +GKL+P RG+V TWC EA +I P VKTCFKICG+T+A DG ED+AW H FGE YR+LL++Q W HP +LPPL+L EV G NPIT A KE++ +L+P ES S+VE+LE D D+ + GGG EGE
Sbjct: 1 MSFGVQEKSWSDQRECNGWISGSWKFRPNNGSIVQQRPCILVLDDFKCRKDEGFIAALKRDANTIAIFIPGGLTPLLQPLDRVLNKQMKRMLRGKYTAYSASAVADARSGKLKPPERGVVSTWCTEAWESIIPETVKTCFKICGLTLALDGREDHAWREHNFGEDYRDLLEEQHAVWLAEHPDATLPPLKLPEVPGGFDF--NPITGAQKEVEEKLMPYVAD-ESASEVEVLEGDSDVEVVEGQGGGGAEGE 249
BLAST of mRNA_H-elongata_contig78440.15513.1 vs. uniprot
Match: A0A6H5KRZ1_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRZ1_9PHAE) HSP 1 Score: 304 bits (779), Expect = 4.030e-97 Identity = 150/231 (64.94%), Postives = 174/231 (75.32%), Query Frame = 1
Query: 1 LSFGVQENSWCDARECTLWISESWRLRLINGSIITQRPSILVLDDFKCHRDEAFIADLRKRCNTSVILIPGGLTRLLQPQDRMLNKQMK*LLRGKYTAYTAAAVADPTTGKLRPLGRGMVPTWCKEACAAITPGVVKTCFKICGITVAFDGSEDNAWCMHTFGEGYRELLQKQRVAWKEAHPGVSLPPLQLLEVADGESIGTNPITAA*KEIQGRLLPLTGGKESDSDVEL 693
+SFGVQE SWCD REC LWI +SW+LR NGSI+ QR ILVLDDFKCH+D+ FIA L++ NT VI IPGGLT LLQP DRMLNKQMK LLRG YTA+TA A DP TGKL P GRG V TWCK A A+ITP KTCFKICG+T+A DGSED+AWC+H FG+GYRELL++QRV W HP V+LPPLQL +V ES N I AA KE++ LLP + DSD+E+
Sbjct: 337 MSFGVQEKSWCDLRECKLWIKDSWKLRPNNGSIVRQRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTAHTAKAARDPKTGKLAPPGRGAVATWCKNAWASITPETAKTCFKICGLTLALDGSEDHAWCLHNFGDGYRELLEQQRVEWLAEHPNVTLPPLQLPKVP-AESTA-NHIEAAAKELEAGLLP----RGDDSDIEI 561
BLAST of mRNA_H-elongata_contig78440.15513.1 vs. uniprot
Match: A0A6H5KE45_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE45_9PHAE) HSP 1 Score: 301 bits (771), Expect = 5.290e-96 Identity = 149/231 (64.50%), Postives = 174/231 (75.32%), Query Frame = 1
Query: 1 LSFGVQENSWCDARECTLWISESWRLRLINGSIITQRPSILVLDDFKCHRDEAFIADLRKRCNTSVILIPGGLTRLLQPQDRMLNKQMK*LLRGKYTAYTAAAVADPTTGKLRPLGRGMVPTWCKEACAAITPGVVKTCFKICGITVAFDGSEDNAWCMHTFGEGYRELLQKQRVAWKEAHPGVSLPPLQLLEVADGESIGTNPITAA*KEIQGRLLPLTGGKESDSDVEL 693
+SFGVQE SWCD RE LWI +SW+LR NGS++ QR ILVLDDFKCH+D+ FIA L++ NT VI IPGGLT LLQP DRMLNKQMK LLRG YTA+TA A DP TGKL P GRG V TWCK A A+ITP VKTCFKICG+T+A DGSED+AWC+H FG+GYRELL++QRV W HP V+LPPLQL +V ES N I AA KE++ LLP + DSD+E+
Sbjct: 330 MSFGVQEKSWCDLREYKLWIKDSWKLRPNNGSVVRQRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTAHTAKAARDPKTGKLAPPGRGAVATWCKNAWASITPETVKTCFKICGLTLALDGSEDHAWCLHNFGDGYRELLEQQRVEWLAEHPNVTLPPLQLPKVP-AESTA-NHIEAAAKELEAGLLP----RGDDSDIEI 554
BLAST of mRNA_H-elongata_contig78440.15513.1 vs. uniprot
Match: A0A6H5J8R4_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8R4_9PHAE) HSP 1 Score: 288 bits (738), Expect = 5.210e-94 Identity = 140/218 (64.22%), Postives = 167/218 (76.61%), Query Frame = 1
Query: 1 LSFGVQENSWCDARECTLWISESWRLRLINGSIITQRPSILVLDDFKCHRDEAFIADLRKRCNTSVILIPGGLTRLLQPQDRMLNKQMK*LLRGKYTAYTAAAVADPTTGKLRPLGRGMVPTWCKEACAAITPGVVKTCFKICGITVAFDGSEDNAWCMHTFGEGYRELLQKQRVAWKEAHPGVSLPPLQLLEVADGESIGTNPITAA*KEIQGRLLP 654
+SFGVQE SW D REC W S SW+LR NGSI+ QRP ILVLDDFKCH+DE FIA L++ NT VI IPGGLT LLQP D LNKQMK LLRGK+TAY+++AVAD +GKL+P RG+V TWCKE +ITP VKTCFKICG+T+A DGSED+AWC H FGE YR+LL++Q W HP V+LPPL+L +V G +NPITAA KE++G+LLP
Sbjct: 62 MSFGVQEKSWSDQRECNGWTSGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRDANTIVIFIPGGLTPLLQPLD--LNKQMKRLLRGKHTAYSSSAVADARSGKLKPPERGIVSTWCKEEWESITPETVKTCFKICGLTLALDGSEDHAWCAHNFGEDYRDLLEEQHAVWLAEHPNVTLPPLKLPKVPGG--FDSNPITAAQKEVEGKLLP 275
BLAST of mRNA_H-elongata_contig78440.15513.1 vs. uniprot
Match: A0A6H5KYG9_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYG9_9PHAE) HSP 1 Score: 295 bits (755), Expect = 3.390e-93 Identity = 148/227 (65.20%), Postives = 168/227 (74.01%), Query Frame = 1
Query: 10 GVQENSWCDARECTLWISESWRLRLINGSIITQRPSILVLDDFKCHRDEAFIADLRKRCNTSVILIPGGLTRLLQPQDRMLNKQMK*LLRGKYTAYTAAAVADPTTGKLRPLGRGMVPTWCKEACAAITPGVVKTCFKICGITVAFDGSEDNAWCMHTFGEGYRELLQKQRVAWKEAHPGVSLPPLQLLEVADGESIGTNPITAA*KEIQGRLLPLTGGKESDSDVE 690
GVQE SWCD REC LWI +SW+LR NGSI+ QR ILVLDDFKCH+D+ FIA L K NT VI IPGGLT LLQP DRMLNKQMK LLRG YTA TA A DP TG L P GRG V TWCK A A+ITP VKTCFKICG+T+A DGSED+AWC+H FG+GYRELL++QRV W HP V+LP LQL +V ES N I AA KE++ LLP G +SD ++E
Sbjct: 370 GVQEKSWCDLRECKLWIKDSWKLRPNNGSIVRQRRCILVLDDFKCHKDDGFIAALNKEANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTANTAKAARDPKTGNLAPPGRGAVATWCKNAWASITPETVKTCFKICGLTLALDGSEDHAWCLHNFGDGYRELLEQQRVEWLAEHPNVTLPTLQLPKVP-AESTA-NHIEAAAKELEAGLLPC--GDDSDIEIE 592
BLAST of mRNA_H-elongata_contig78440.15513.1 vs. uniprot
Match: A0A6H5KII4_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KII4_9PHAE) HSP 1 Score: 286 bits (733), Expect = 5.820e-92 Identity = 152/285 (53.33%), Postives = 179/285 (62.81%), Query Frame = 1
Query: 1 LSFGVQENSWCDARECTLWISESWRLRLINGSIITQRPSILVLDDFKCHRDEAFIADLRKRCNTSVILIPGGLTRLLQPQDRMLNKQMK*LLRGKYTAYTAAAVADPTTGKLRPLGRGMVPTWCKEACAAITPGVVKTCFKICGITVAFDGSEDNAWCMHTFGEGYRELLQKQRVAWKEAHPGVSLPPLQLLEVADGE---------------------------------SIGTNPITAA*KEIQGRLLPLTGGKESDSDVELLEYDIDLACLGVSGGGEKEGE 756
+SFGVQE SW D REC W S SW+LR NGSI+ QRP ILVLDDFKCH+DE FIA L++ NT VI IPGGLT LLQP DRMLNKQ K LLR KYTAY+A+A D +GKL+P RG+V TWCK A +ITP VKTCFKICG+T+A DGSED+AWC H FGE YR+LL++Q W HP V+LPPL+L +V +NPI AA KE++G+LLP ESDS+VE+LE GGG EGE
Sbjct: 151 MSFGVQEKSWSDQRECNGWTSGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRDANTIVIFIPGGLTPLLQPLDRMLNKQTKRLLRSKYTAYSASAT-DARSGKLKPPERGVVSTWCKGAWESITPETVKTCFKICGLTLALDGSEDHAWCAHNFGEDYRDLLEEQHAVWLAEHPNVTLPPLKLPKVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGFDSNPIMAAQKEVEGKLLPYVPD-ESDSEVEVLEGXXXXXXXXXQGGGGAEGE 433
BLAST of mRNA_H-elongata_contig78440.15513.1 vs. uniprot
Match: A0A6H5JN68_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN68_9PHAE) HSP 1 Score: 285 bits (729), Expect = 5.400e-89 Identity = 154/298 (51.68%), Postives = 182/298 (61.07%), Query Frame = 1
Query: 1 LSFGVQENSWCDAREC-----------------------------------------TLWISESWR-----LRLINGSIITQRPSILVLDDFKCHRDEAFIADLRKRCNTSVILIPGGLTRLLQPQDRMLNKQMK*LLRGKYTAYTAAAVADPTTGKLRPLGRGMVPTWCKEACAAITPGVVKTCFKICGITVAFDGSEDNAWCMHTFGEGYRELLQKQRVAWKEAHPGVSLPPLQLLEVADGESIGTNPITAA*KEIQGRLLPLTGGKESDSDVELLEYDIDLACLGVSGGGEKEGE 756
+SFGVQE SW D REC + W E+W R NGSI+ QRP ILVLDDF+CH+DE FIA L + NT VI IPGGLT L P DRMLNKQMK LLRGKYTAY+A+AVAD +GKL+P RG+V TWCKEA +ITP VKTCFKICG+T+A DGSED+AWC H FGE YR+LL++Q W HP V+LPPL+L +V G +NPITAA KE++G+LLP ESDS+VE+LE GGG EGE
Sbjct: 345 MSFGVQEKSWSDQRECNGARASWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERGVVSTWCKEAWESTPETXRPNNGSIVQQRPCILVLDDFRCHKDEGFIAALNRDPNTIVIFIPGGLTPLFHPLDRMLNKQMKRLLRGKYTAYSASAVADARSGKLKPPERGVVSTWCKEAWESITPETVKTCFKICGLTLALDGSEDHAWCEHNFGEDYRDLLEEQHAVWLAEHPDVTLPPLKLPKVPGG--FDSNPITAAQKEVEGKLLPYVAD-ESDSEVEVLEGXXXXXXXXXQGGGGAEGE 639 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig78440.15513.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig78440.15513.1 >prot_H-elongata_contig78440.15513.1 ID=prot_H-elongata_contig78440.15513.1|Name=mRNA_H-elongata_contig78440.15513.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=91bp MVPTWCKEACAAITPGVVKTCFKICGITVAFDGSEDNAWCMHTFGEGYREback to top mRNA from alignment at H-elongata_contig78440:1955..2710+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig78440.15513.1 ID=mRNA_H-elongata_contig78440.15513.1|Name=mRNA_H-elongata_contig78440.15513.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=756bp|location=Sequence derived from alignment at H-elongata_contig78440:1955..2710+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig78440:1955..2710+ >mRNA_H-elongata_contig78440.15513.1 ID=mRNA_H-elongata_contig78440.15513.1|Name=mRNA_H-elongata_contig78440.15513.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=546bp|location=Sequence derived from alignment at H-elongata_contig78440:1955..2710+ (Himanthalia elongata Himel1 dioecious)back to top |