mRNA_H-elongata_contig77335.15411.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig77335.15411.1 vs. uniprot
Match: D7FLG9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLG9_ECTSI) HSP 1 Score: 274 bits (701), Expect = 8.700e-92 Identity = 125/169 (73.96%), Postives = 141/169 (83.43%), Query Frame = 1
Query: 1 QKFIKPAMWLPGFRYPHNWWETWTVENAGPEVCTRDMGRAIENVADSASAQEGVGGGLMLFHLSSLRYSAEERTGYATMLCLTKARWMDIVELKIYPPAEGASGSEVLAHGYSTGFLPLKIPFAFLFNIPLCFVPFSDMKIIRTSWMPGIRNRLEHKALVKEGSEGYRL 507
QKF+KPAMWLPG RYPHNWWETW+V A PEVC RDMGRAIENVA +A + EG+G G M+F L+SLRY AEE GYA M+C++KARW+DIVELK+Y P G GSEV AHGYSTGFLPLKIP A L NIPLCF+PFSD KIIR +WMPGIRNRLEHKA V+EGSE Y+L
Sbjct: 32 QKFLKPAMWLPGLRYPHNWWETWSVATADPEVCVRDMGRAIENVAIAAESSEGIGDGQMVFQLASLRYCAEEGVGYAKMICVSKARWLDIVELKVYKPEGGGEGSEVAAHGYSTGFLPLKIPLACLINIPLCFIPFSDNKIIRNTWMPGIRNRLEHKAFVQEGSERYKL 200
BLAST of mRNA_H-elongata_contig77335.15411.1 vs. uniprot
Match: A0A2B4SQK4_STYPI (Uncharacterized protein n=2 Tax=Pocilloporidae TaxID=46729 RepID=A0A2B4SQK4_STYPI) HSP 1 Score: 92.4 bits (228), Expect = 1.260e-20 Identity = 53/140 (37.86%), Postives = 77/140 (55.00%), Query Frame = 1
Query: 1 QKFIKPAMWLPGFRYPHNWWETWTVENAGPEVCTRDMGRAIENVADSASAQEGVGGGLMLFHLSSLRYSAEERTGYATMLCLTKARWMDIVELKIYPPAEGASGSEVLAHGYSTGFLPLKIPFAFLFNIPLCFVPFSDMK 420
Q ++PA+WLPG R H+ ETW + A PEVC + AI ++++ H++ +R+ ER + + T+A W+DIVE++ P E G+ A +STGFLPL IPFAFL N+ F+PF D K
Sbjct: 16 QGVLRPAVWLPGVRNLHSCKETWIIPEATPEVCLEHLVSAIALLSETEK-----------MHINKVRH---ERN-FVQIFSYTEAEWLDIVEIEFQPGQE--RGTLAKAKSFSTGFLPLMIPFAFLLNMIFFFIPFYDNK 138
BLAST of mRNA_H-elongata_contig77335.15411.1 vs. uniprot
Match: UPI0009E3CCF5 (uncharacterized protein LOC110059774 n=1 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E3CCF5) HSP 1 Score: 83.6 bits (205), Expect = 3.350e-17 Identity = 48/140 (34.29%), Postives = 70/140 (50.00%), Query Frame = 1
Query: 1 QKFIKPAMWLPGFRYPHNWWETWTVENAGPEVCTRDMGRAIENVADSASAQEGVGGGLMLFHLSSLRYSAEERTGYATMLCLTKARWMDIVELKIYPPAEGASGSEVLAHGYSTGFLPLKIPFAFLFNIPLCFVPFSDMK 420
Q ++PAMW+PG R H+ ETW + A PEVC + A+ +++ H++ +R + + T+ W+DIVE++ P E G+ A +STG LPL IPFAFL N+ F PF D K
Sbjct: 16 QGALRPAMWVPGIRNLHSRNETWVIPEATPEVCLEHVISAVAILSEKEK-----------MHINKVRPGRN----FVQIFSYTEYEWLDIVEIEFQPGQE--RGTLAKARSFSTGLLPLMIPFAFLLNMIFFFAPFYDNK 138
BLAST of mRNA_H-elongata_contig77335.15411.1 vs. uniprot
Match: A0A210R2M1_MIZYE (Uncharacterized protein n=1 Tax=Mizuhopecten yessoensis TaxID=6573 RepID=A0A210R2M1_MIZYE) HSP 1 Score: 81.3 bits (199), Expect = 2.260e-16 Identity = 43/143 (30.07%), Postives = 75/143 (52.45%), Query Frame = 1
Query: 1 QKFIKPAMWLPGFRYPHNWWETWTVENAGPEVCTRDMGRAIENVADSASAQEGVGGGLMLFHLSSLRYSAEERTGYATMLCLTKARWMDIVELKIYPPAEGASGSEVLAHGYSTGFLPLKIPFAFLFNIPLCFVPFSDMKIIR 429
Q F++PAMWLPG H+ ETW ++ G + D+ ++ ++ +S + G + + +E G+ + T A W+D++E + G+++ A +S+GFLPL +PFA +FN L ++PF D+K R
Sbjct: 13 QSFLRPAMWLPGCNRLHSHTETWRSDSVGADSLLEDIVNSVPDLMESD-----ITGATYVVN------KVDEERGFVRIFAFTWANWLDVMEFTM-------RGNKIQARSFSSGFLPLSVPFAVIFNCVLFWMPFYDIKYNR 137
BLAST of mRNA_H-elongata_contig77335.15411.1 vs. uniprot
Match: UPI001F043BDA (uncharacterized protein LOC124433766 n=1 Tax=Xenia sp. Carnegie-2017 TaxID=2897299 RepID=UPI001F043BDA) HSP 1 Score: 78.6 bits (192), Expect = 2.090e-15 Identity = 47/146 (32.19%), Postives = 73/146 (50.00%), Query Frame = 1
Query: 1 QKFIKPAMWLPGFRYPHNWWETWTVENAGPEVCTRDMGRAIENVADSASAQEGVGGGLMLFHLSSLRYSAEERTGYATMLCLTKARWMDIVELKIYPPA-EGASGSEVLAHGYSTGFLPLKIPFAFLFNIPLCFVPFSDMKIIRTS 435
Q ++PA+WLPG R H+ E W + PE + + I+ VA A ++ + H S + + + C TKA W+D+VE+ +YP +G G+ A +STG LP+ +P +FL N FVPF D + R +
Sbjct: 13 QAKLRPAVWLPGVRNLHSCAERWEIPELVPE---ESLQKVIDAVARLAEMED------IYLH------SVDREKNFVQIFCYTKAGWLDVVEIDLYPGRFQGTQGN---ARSFSTGLLPVWVPLSFLLNSIFFFVPFYDRNLNRNA 140
BLAST of mRNA_H-elongata_contig77335.15411.1 vs. uniprot
Match: UPI001458713E (uncharacterized protein LOC117333004 n=1 Tax=Pecten maximus TaxID=6579 RepID=UPI001458713E) HSP 1 Score: 77.4 bits (189), Expect = 6.850e-15 Identity = 41/144 (28.47%), Postives = 70/144 (48.61%), Query Frame = 1
Query: 1 QKFIKPAMWLPGFRYPHNWWETWTVENAGPEVCTRDMGRAIENVADSASAQEGVGGGLMLFHLSSLRYSAEERTGYATMLCLTKARWMDIVELKIYPPAEGASGSEVLAHGYSTGFLPLKIPFAFLFNIPLCFVPFSDMKIIRT 432
Q F++PAMW+PG H+ E W ++ G + D+ + ++ + S + + +E G+ + T A W+D++E + G+++ A +S+GFLPL IPFA + N L ++PF D K RT
Sbjct: 13 QSFLRPAMWVPGCNKLHSHKEIWRSDSVGADALLEDIINTVPDLTECDSTGS-----------TYVVNKVDEERGFVRIFAFTWANWLDVMEFTL-------RGNKLQARSFSSGFLPLSIPFAAILNCVLFWIPFYDKKFNRT 138
BLAST of mRNA_H-elongata_contig77335.15411.1 vs. uniprot
Match: UPI00065BA7F8 (uncharacterized protein LOC106012991 n=1 Tax=Aplysia californica TaxID=6500 RepID=UPI00065BA7F8) HSP 1 Score: 75.1 bits (183), Expect = 9.570e-14 Identity = 45/138 (32.61%), Postives = 71/138 (51.45%), Query Frame = 1
Query: 1 QKFIKPAMWLPGFRYPHNWWETWTVENAGPEVCTRDMGRAIENVADSASAQEGVGGGLMLFHLSSLRYSAEERTGYATMLCLTKARWMDIVELKIYPPAEGASGSEVLAHGYSTGFLPLKIPFAFLFNIPLCFVPFSD 414
Q F++PA+W+PG R H+ ETWT+ + + + A+ V +E G + L+ + G+ + T+A W+DI+EL G+EV +S+GFLPL IPFA + N+PL ++PF D
Sbjct: 41 QNFLRPAVWVPGLRNLHSHRETWTLPSDSHQNNLESVLGALMTVI-----KEDKSGSFWDVQKNDLQVAR----GFIRVFVYTRAEWLDIIELTF-------KGTEVQVWSFSSGFLPLFIPFACVLNVPLFWIPFLD 162
BLAST of mRNA_H-elongata_contig77335.15411.1 vs. uniprot
Match: A0A1X7VML2_AMPQE (Uncharacterized protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7VML2_AMPQE) HSP 1 Score: 74.3 bits (181), Expect = 1.410e-13 Identity = 40/141 (28.37%), Postives = 70/141 (49.65%), Query Frame = 1
Query: 1 QKFIKPAMWLPGFRYPHNWWETWTVENAGPEVCTRDMGRAIENVADSASAQEGVGGGLMLFHLSSLRYSAEERTGYATMLCLTKARWMDIVELKIYPPAEGASGSEVLAHGYSTGFLPLKIPFAFLFNIPLCFVPFSDMKI 423
Q ++P +WLPG R PH + E W VE P+ ++ ++I +V D + L+ + EER + W+D++E++I + S + V G+STG P+ +P +FL++ C++PF D+ I
Sbjct: 19 QSLLRPGLWLPGIRTPHQYSEVWEVEEP-PQQAFDEILKSIRSVIDKDK------------EMMELKEADEERLFIQLFSFTRRCNWLDVIEIQI-DASLMQSETTVSVKGFSTGIFPVSLPLSFLWSALFCWIPFKDVGI 145
BLAST of mRNA_H-elongata_contig77335.15411.1 vs. uniprot
Match: A0A6J8B8L3_MYTCO (Uncharacterized protein n=1 Tax=Mytilus coruscus TaxID=42192 RepID=A0A6J8B8L3_MYTCO) HSP 1 Score: 74.3 bits (181), Expect = 3.000e-13 Identity = 44/141 (31.21%), Postives = 72/141 (51.06%), Query Frame = 1
Query: 1 QKFIKPAMWLPGFRYPHNWWETWTVENAGPEVCTRDMGRAIENVADSASAQEGVGGGLMLFHLSSLRYSAEERTGYATMLCLTKARWMDIVELKIYPPAEGASGSEVLAHGYSTGFLPLKIPFAFLFNIPLCFVPFSDMKI 423
Q I+PAMW+PG + H+ + TW + EV + RAI+ + + + G + ++ +Y + + C T+A W+D+VE++I + A +S+GFLPL IPFAF+ N +VPF D K+
Sbjct: 7 QALIRPAMWIPGIKNLHSHFVTWQSDKPPTEVLAA-LVRAIKQIKSA----DDTGSYYDIHKINKEKY-------FLRVFCFTRAEWLDVVEIEI-------KEDSIEAKSFSSGFLPLFIPFAFILNCVFFWVPFYDNKL 128
BLAST of mRNA_H-elongata_contig77335.15411.1 vs. uniprot
Match: A0A3L5TV06_MYTGA (Uncharacterized protein (Fragment) n=1 Tax=Mytilus galloprovincialis TaxID=29158 RepID=A0A3L5TV06_MYTGA) HSP 1 Score: 70.5 bits (171), Expect = 1.980e-11 Identity = 40/141 (28.37%), Postives = 68/141 (48.23%), Query Frame = 1
Query: 1 QKFIKPAMWLPGFRYPHNWWETWTVENAGPEVCTRDMGRAIENVADSASAQEGVGGGLMLFHLSSLRYSAEERTGYATMLCLTKARWMDIVELKIYPPAEGASGSEVLAHGYSTGFLPLKIPFAFLFNIPLCFVPFSDMKI 423
Q ++PAMW+PG + H+ + TW + EV A+ + + G + ++ ++ + + C T+A W+D+VE++I + A +S+GFLPL IPFAF+ N +VPF D K+
Sbjct: 31 QALLRPAMWIPGIKNIHSHFVTWQSDKPPTEVLA-----ALVTAIKQIKSSDDTGSFYDIHKINKDKH-------FLRVFCFTRAEWLDVVEIEI-------KEDSIEAKSFSSGFLPLFIPFAFILNCVFFWVPFFDNKL 152 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig77335.15411.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig77335.15411.1 >prot_H-elongata_contig77335.15411.1 ID=prot_H-elongata_contig77335.15411.1|Name=mRNA_H-elongata_contig77335.15411.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=163bp MWLPGFRYPHNWWETWTVENAGPEVCTRDMGRAIENVADSASAQEGVGGGback to top mRNA from alignment at H-elongata_contig77335:1231..2207- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig77335.15411.1 ID=mRNA_H-elongata_contig77335.15411.1|Name=mRNA_H-elongata_contig77335.15411.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=977bp|location=Sequence derived from alignment at H-elongata_contig77335:1231..2207- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig77335:1231..2207- >mRNA_H-elongata_contig77335.15411.1 ID=mRNA_H-elongata_contig77335.15411.1|Name=mRNA_H-elongata_contig77335.15411.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=978bp|location=Sequence derived from alignment at H-elongata_contig77335:1231..2207- (Himanthalia elongata Himel1 dioecious)back to top |