mRNA_H-elongata_contig76913.15362.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig76913.15362.1 vs. uniprot
Match: A0A6H5JB93_9PHAE (Cytochrome b5 heme-binding domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JB93_9PHAE) HSP 1 Score: 146 bits (368), Expect = 3.900e-40 Identity = 66/75 (88.00%), Postives = 73/75 (97.33%), Query Frame = 1
Query: 1 QHPGGNVIFTHAGDDFTDIFAAFHPPTAYAVLEPFYIGDLDEKSAVAKPAKQQVFERAYRELRAKLLTMGMFNAE 225
+HPGGNVIFTHAGDDFTDIFAAFHPPTAYAVLEPFYIGDLDEKSAVAKPA Q+ FER+YRELR+KLLTMGM+N++
Sbjct: 66 EHPGGNVIFTHAGDDFTDIFAAFHPPTAYAVLEPFYIGDLDEKSAVAKPAAQRAFERSYRELRSKLLTMGMYNSD 140
BLAST of mRNA_H-elongata_contig76913.15362.1 vs. uniprot
Match: A0A835YVN5_9STRA (Delta-6 desaturase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVN5_9STRA) HSP 1 Score: 114 bits (284), Expect = 4.230e-28 Identity = 50/74 (67.57%), Postives = 60/74 (81.08%), Query Frame = 1
Query: 1 QHPGGNVIFTHAGDDFTDIFAAFHPPTAYAVLEPFYIGDLDEKSAVAKPAKQQVFERAYRELRAKLLTMGMFNA 222
HPGG+VIFTHAGDDFTDIFAAFHPP+AY ++PFYIG+LD S KP Q+ FE+AYR+LR KL+ GMFN+
Sbjct: 57 DHPGGHVIFTHAGDDFTDIFAAFHPPSAYKSMDPFYIGELDTPSIEIKPLAQRNFEKAYRDLRGKLVVAGMFNS 130
BLAST of mRNA_H-elongata_contig76913.15362.1 vs. uniprot
Match: A0A835YIW8_9STRA (Delta-6 fatty acid desaturase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIW8_9STRA) HSP 1 Score: 114 bits (284), Expect = 4.330e-28 Identity = 51/74 (68.92%), Postives = 60/74 (81.08%), Query Frame = 1
Query: 1 QHPGGNVIFTHAGDDFTDIFAAFHPPTAYAVLEPFYIGDLDEKSAVAKPAKQQVFERAYRELRAKLLTMGMFNA 222
HPGG+VIFTHAGDD TDIFAAFHPP+AY +EP+ IGDLD+ S KPA Q+ FERAYR+LR KL+ GMFN+
Sbjct: 60 DHPGGHVIFTHAGDDATDIFAAFHPPSAYKTMEPYCIGDLDKASVERKPAAQRDFERAYRDLRGKLVVAGMFNS 133
BLAST of mRNA_H-elongata_contig76913.15362.1 vs. uniprot
Match: A0A6U1MUF7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1MUF7_9STRA) HSP 1 Score: 102 bits (255), Expect = 1.140e-25 Identity = 50/74 (67.57%), Postives = 57/74 (77.03%), Query Frame = 1
Query: 1 QHPGGNVIFTHAGDDFTDIFAAFHPPTAYAVLEPFYIGDLDEKSAVAKPAKQQVFERAYRELRAKLLTMGMFNA 222
HPGG VIFTHAGDDFTDIFAAFHP ++YAVL+ F IG LDE S K Q+ FE+AYR LR KL+ MGM+NA
Sbjct: 50 DHPGGAVIFTHAGDDFTDIFAAFHPKSSYAVLDKFLIGYLDE-STTKKTEDQKNFEKAYRTLRTKLVAMGMYNA 122
BLAST of mRNA_H-elongata_contig76913.15362.1 vs. uniprot
Match: A0A7S0C8F5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C8F5_9STRA) HSP 1 Score: 97.8 bits (242), Expect = 1.040e-23 Identity = 45/74 (60.81%), Postives = 57/74 (77.03%), Query Frame = 1
Query: 1 QHPGGNVIFTHAGDDFTDIFAAFHPPTAYAVLEPFYIGDLDEKSAVAKPAKQQVFERAYRELRAKLLTMGMFNA 222
QHPGG+VIFTHAGDD TDIF AFH P + A+++ FYIGDL ++S K +Q FE+ YR+LRAKL+ MGMF +
Sbjct: 58 QHPGGSVIFTHAGDDMTDIFTAFHAPGSEAMIKRFYIGDLVKESMEHKNEEQFAFEQGYRDLRAKLVMMGMFKS 131
BLAST of mRNA_H-elongata_contig76913.15362.1 vs. uniprot
Match: A0A7S1D6N9_CYCTE (Hypothetical protein (Fragment) n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D6N9_CYCTE) HSP 1 Score: 94.7 bits (234), Expect = 9.200e-23 Identity = 42/74 (56.76%), Postives = 55/74 (74.32%), Query Frame = 1
Query: 1 QHPGGNVIFTHAGDDFTDIFAAFHPPTAYAVLEPFYIGDLDEKSAVAKPAKQQVFERAYRELRAKLLTMGMFNA 222
+HPGG V+FTHAGDD TDIFAAFH + A+++ FYIGDL +S + +Q FE+ YR+LRAKL+ MGMF +
Sbjct: 60 EHPGGAVVFTHAGDDMTDIFAAFHAAGSQAMMKRFYIGDLIPESVAYRDERQLAFEKGYRDLRAKLVMMGMFKS 133
BLAST of mRNA_H-elongata_contig76913.15362.1 vs. uniprot
Match: A0A1E7EWC8_9STRA (Delta-6 fatty acid desaturase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EWC8_9STRA) HSP 1 Score: 98.2 bits (243), Expect = 2.690e-22 Identity = 44/76 (57.89%), Postives = 56/76 (73.68%), Query Frame = 1
Query: 1 QHPGGNVIFTHAGDDFTDIFAAFHPPTAYAVLEPFYIGDLDEKSAVAKPAKQQVFERAYRELRAKLLTMGMFNAEW 228
HPGG V+FTHAGDD TDIFAAFH P + +L+ FYIGDL +S K A Q FE+AYR+LR++L+ MGMF + +
Sbjct: 59 DHPGGGVVFTHAGDDATDIFAAFHAPGSQGMLKKFYIGDLIVESVEHKDAHQHAFEKAYRDLRSQLIVMGMFKSNF 134
BLAST of mRNA_H-elongata_contig76913.15362.1 vs. uniprot
Match: A0A7S3PA41_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3PA41_9STRA) HSP 1 Score: 91.7 bits (226), Expect = 3.830e-22 Identity = 43/77 (55.84%), Postives = 55/77 (71.43%), Query Frame = 1
Query: 1 QHPGGNVIFTHAGDDFTDIFAAFHPPTAYAVLEPFYIGDLD---EKSAVAKPAKQQVFERAYRELRAKLLTMGMFNA 222
+HPGG VIFTHAGDD TDIFAAFH P ++ ++ FYIGD+ E K AKQ FE+ YR+LR+KL+ MG+F +
Sbjct: 48 EHPGGAVIFTHAGDDMTDIFAAFHAPGSHNMMRKFYIGDMVDPVEDKTRPKDAKQIAFEKGYRDLRSKLVMMGLFKS 124
BLAST of mRNA_H-elongata_contig76913.15362.1 vs. uniprot
Match: A0A1S7C7Q7_9STRA (Delta-6 fatty acid desaturase n=2 Tax=Nannochloropsis TaxID=5748 RepID=A0A1S7C7Q7_9STRA) HSP 1 Score: 96.7 bits (239), Expect = 9.100e-22 Identity = 48/74 (64.86%), Postives = 54/74 (72.97%), Query Frame = 1
Query: 1 QHPGGNVIFTHAGDDFTDIFAAFHPPTAYAVLEPFYIGDLDEKSAVAKPAKQQVFERAYRELRAKLLTMGMFNA 222
HPGGNVIFTHAG D TDIFAAFHP A + L+PFYIG+L E + KPA Q FERAYR+LR KL+ G F A
Sbjct: 61 DHPGGNVIFTHAGGDCTDIFAAFHPLGATSYLDPFYIGEL-EPGSDKKPAAQANFERAYRDLRGKLIAGGFFKA 133
BLAST of mRNA_H-elongata_contig76913.15362.1 vs. uniprot
Match: A0A0N9JKY6_9EUKA (Delta 6 fatty acid desaturase n=1 Tax=Isochrysis sp. SKMKUIso1 TaxID=1707607 RepID=A0A0N9JKY6_9EUKA) HSP 1 Score: 96.7 bits (239), Expect = 9.400e-22 Identity = 48/74 (64.86%), Postives = 54/74 (72.97%), Query Frame = 1
Query: 1 QHPGGNVIFTHAGDDFTDIFAAFHPPTAYAVLEPFYIGDLDEKSAVAKPAKQQVFERAYRELRAKLLTMGMFNA 222
HPGGNVIFTHAG D TDIFAAFHP A + L+PFYIG+L E + KPA Q FERAYR+LR KL+ G F A
Sbjct: 112 DHPGGNVIFTHAGGDCTDIFAAFHPLGATSYLDPFYIGEL-EPGSDKKPAAQANFERAYRDLRGKLIAGGFFKA 184 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig76913.15362.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig76913.15362.1 >prot_H-elongata_contig76913.15362.1 ID=prot_H-elongata_contig76913.15362.1|Name=mRNA_H-elongata_contig76913.15362.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=76bp QHPGGNVIFTHAGDDFTDIFAAFHPPTAYAVLEPFYIGDLDEKSAVAKPAback to top mRNA from alignment at H-elongata_contig76913:2758..2985+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig76913.15362.1 ID=mRNA_H-elongata_contig76913.15362.1|Name=mRNA_H-elongata_contig76913.15362.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=228bp|location=Sequence derived from alignment at H-elongata_contig76913:2758..2985+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig76913:2758..2985+ >mRNA_H-elongata_contig76913.15362.1 ID=mRNA_H-elongata_contig76913.15362.1|Name=mRNA_H-elongata_contig76913.15362.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=456bp|location=Sequence derived from alignment at H-elongata_contig76913:2758..2985+ (Himanthalia elongata Himel1 dioecious)back to top |