mRNA_H-elongata_contig7690.15361.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig7690.15361.1 vs. uniprot
Match: A0A6H5L6F7_9PHAE (Importin N-terminal domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L6F7_9PHAE) HSP 1 Score: 253 bits (646), Expect = 9.140e-76 Identity = 127/140 (90.71%), Postives = 132/140 (94.29%), Query Frame = 1
Query: 7 MDAAQLAQVESLCETLYNSVDEAARSHAQNQLLSLQASAERIPQCQYILDHSENAYALLLASSSLTRLISNHWNSFTPPQRVEIRNYILNYLGSVGPNLTDYVKTSLIQLLCRITKLGWFDDPRHREVVDAVMRFLQVRS 426
MDAAQL QVE+LCETLYNS DEAARSHAQNQLLSLQ SAERIPQCQYILDHSENAYALLLASSSLTRLIS+HWN+FT PQRVEIRNYILNYLGSVGP LTDYV+TSLIQLLCRITKLGWFDD RHREVVDAVMRFLQ +
Sbjct: 1 MDAAQLVQVEALCETLYNSTDEAARSHAQNQLLSLQTSAERIPQCQYILDHSENAYALLLASSSLTRLISSHWNNFTTPQRVEIRNYILNYLGSVGPGLTDYVRTSLIQLLCRITKLGWFDDQRHREVVDAVMRFLQATN 140
BLAST of mRNA_H-elongata_contig7690.15361.1 vs. uniprot
Match: A0A835YUW2_9STRA (RAN binding protein 16-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUW2_9STRA) HSP 1 Score: 196 bits (499), Expect = 1.590e-55 Identity = 96/141 (68.09%), Postives = 118/141 (83.69%), Query Frame = 1
Query: 4 AMDAAQLAQVESLCETLYNSVDEAARSHAQNQLLSLQASAERIPQCQYILDHSENAYALLLASSSLTRLISNHWNSFTPPQRVEIRNYILNYLGSVGPNLTDYVKTSLIQLLCRITKLGWFDDPRHREVVDAVMRFLQVRS 426
AMDA QLAQVESLC+ LYN+ +EA R+ AQ QL+SLQ+S + IPQCQYILD+S+N YA LLAS+SLT+LI+ HWNSF+ PQRV+IRNYIL+YL S GP+L DYV T+L+QLLCRITKLGWFDD HR++VD ++FL S
Sbjct: 2 AMDAQQLAQVESLCDALYNAANEAQRASAQQQLMSLQSSVDYIPQCQYILDNSQNPYARLLASNSLTQLITQHWNSFSVPQRVDIRNYILSYLASQGPSLKDYVVTALVQLLCRITKLGWFDDAAHRDLVDETLKFLGAPS 142
BLAST of mRNA_H-elongata_contig7690.15361.1 vs. uniprot
Match: A0A7S1USY4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1USY4_9STRA) HSP 1 Score: 174 bits (442), Expect = 1.680e-53 Identity = 89/144 (61.81%), Postives = 111/144 (77.08%), Query Frame = 1
Query: 7 MDAAQLAQVESLCETLYNSVDEAA-------RSHAQNQLLSLQASAERIPQCQYILDHSENAYALLLASSSLTRLISNHWNSFTPPQRVEIRNYILNYLGSVGPNLTDYVKTSLIQLLCRITKLGWFDDPRHREVVDAVMRFLQ 417
MDA+QLAQVE+LCETLY+ + R+ AQ +LLSLQ+SAE IPQCQYILD S + YA L+AS+SLT LI+++WNSFT QR++IRNY+L YL + GP L D+V SLI+L+CRITKLGWFDDP HRE+ D V +FLQ
Sbjct: 1 MDASQLAQVEALCETLYSGAPSTSEDGKPISRADAQARLLSLQSSAEYIPQCQYILDQSNSQYARLVASNSLTELITSYWNSFTVAQRIDIRNYVLGYLANRGPGLQDFVVVSLIKLVCRITKLGWFDDPTHRELADDVTKFLQ 144
BLAST of mRNA_H-elongata_contig7690.15361.1 vs. uniprot
Match: A0A448YZH3_9STRA (Importin N-terminal domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YZH3_9STRA) HSP 1 Score: 171 bits (434), Expect = 1.620e-51 Identity = 85/144 (59.03%), Postives = 112/144 (77.78%), Query Frame = 1
Query: 7 MDAAQLAQVESLCETLYNSV-------DEAARSHAQNQLLSLQASAERIPQCQYILDHSENAYALLLASSSLTRLISNHWNSFTPPQRVEIRNYILNYLGSVGPNLTDYVKTSLIQLLCRITKLGWFDDPRHREVVDAVMRFLQ 417
M+ AQLAQVE+LCETLY V ++ R AQ +L+SLQ+SA+ IPQCQYIL+++++ YA L+A++SLT LI+ HWNSFT PQR++IRNY+L YL + GP L ++V SLI+L+CRITKLGWFDDP HRE+ D V +FLQ
Sbjct: 1 MEPAQLAQVEALCETLYTGVPTSGENGEQITRQDAQQRLMSLQSSADFIPQCQYILENTKSQYARLVATNSLTELITTHWNSFTIPQRIDIRNYVLTYLANNGPQLENFVVVSLIKLVCRITKLGWFDDPVHRELADDVTKFLQ 144
BLAST of mRNA_H-elongata_contig7690.15361.1 vs. uniprot
Match: A0A2D4BKK5_PYTIN (Exportin-like protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BKK5_PYTIN) HSP 1 Score: 184 bits (468), Expect = 2.580e-51 Identity = 87/138 (63.04%), Postives = 111/138 (80.43%), Query Frame = 1
Query: 4 AMDAAQLAQVESLCETLYNSVDEAARSHAQNQLLSLQASAERIPQCQYILDHSENAYALLLASSSLTRLISNHWNSFTPPQRVEIRNYILNYLGSVGPNLTDYVKTSLIQLLCRITKLGWFDDPRHREVVDAVMRFLQ 417
+MDAAQL +E+LC LY SV E+ R+HAQ +L LQ+SAE IPQCQY+LD+S + YALL+ASSSLT+LI+ HWN+FT PQR++IRNY+L YL GP L +V TSL+Q+LCR+TK GWFDD +HRE+VD V +FLQ
Sbjct: 925 SMDAAQLQTLETLCSALYESVHESERAHAQQAVLVLQSSAEYIPQCQYVLDNSTSPYALLVASSSLTKLITTHWNNFTTPQRIDIRNYVLAYLAQKGPTLQKFVTTSLVQMLCRLTKFGWFDDEQHREIVDEVTKFLQ 1062
BLAST of mRNA_H-elongata_contig7690.15361.1 vs. uniprot
Match: A0A8K1CLU5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CLU5_PYTOL) HSP 1 Score: 184 bits (466), Expect = 4.530e-51 Identity = 86/137 (62.77%), Postives = 109/137 (79.56%), Query Frame = 1
Query: 7 MDAAQLAQVESLCETLYNSVDEAARSHAQNQLLSLQASAERIPQCQYILDHSENAYALLLASSSLTRLISNHWNSFTPPQRVEIRNYILNYLGSVGPNLTDYVKTSLIQLLCRITKLGWFDDPRHREVVDAVMRFLQ 417
MDA+QL +E LC+ +Y SV+E+ R+HAQ +L LQ+SAE IPQCQY+LDHS + YALL+AS+SLT+LI+ HWN+FT PQRV+IRNY+L YL GP L YV TSLIQ++CR+TK GWFDD HRE+V V +FLQ
Sbjct: 1 MDASQLQNLEVLCKAIYESVNESERTHAQQSVLILQSSAEYIPQCQYVLDHSASPYALLVASTSLTKLITTHWNNFTAPQRVDIRNYVLGYLAEKGPKLEKYVTTSLIQMVCRLTKFGWFDDEHHREIVSEVTKFLQ 137
BLAST of mRNA_H-elongata_contig7690.15361.1 vs. uniprot
Match: A0A5D6XJM5_9STRA (Importin N-terminal domain-containing protein (Fragment) n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XJM5_9STRA) HSP 1 Score: 182 bits (461), Expect = 2.160e-50 Identity = 86/137 (62.77%), Postives = 108/137 (78.83%), Query Frame = 1
Query: 7 MDAAQLAQVESLCETLYNSVDEAARSHAQNQLLSLQASAERIPQCQYILDHSENAYALLLASSSLTRLISNHWNSFTPPQRVEIRNYILNYLGSVGPNLTDYVKTSLIQLLCRITKLGWFDDPRHREVVDAVMRFLQ 417
MDA QL +E+LC+ LY S EA R+ AQ +L LQ+SAE IPQCQY+LDHS + YALL+AS+SLT+LI+ HWN+FTPPQRV+IRNY+L YL GP L +V TSLIQ++CR+TK GWFDD +HRE+V V +FLQ
Sbjct: 1 MDATQLRNLETLCKVLYESAVEAERARAQQSVLVLQSSAEYIPQCQYVLDHSASPYALLVASNSLTKLITTHWNNFTPPQRVDIRNYVLGYLAQKGPTLEKFVTTSLIQMVCRLTKFGWFDDEQHREIVGEVTKFLQ 137
BLAST of mRNA_H-elongata_contig7690.15361.1 vs. uniprot
Match: A0A484EDS8_BRELC (Importin N-terminal domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EDS8_BRELC) HSP 1 Score: 181 bits (459), Expect = 4.000e-50 Identity = 85/137 (62.04%), Postives = 109/137 (79.56%), Query Frame = 1
Query: 7 MDAAQLAQVESLCETLYNSVDEAARSHAQNQLLSLQASAERIPQCQYILDHSENAYALLLASSSLTRLISNHWNSFTPPQRVEIRNYILNYLGSVGPNLTDYVKTSLIQLLCRITKLGWFDDPRHREVVDAVMRFLQ 417
MDA QL ++E+LC LY S +E R+HAQ +L LQ+SAE IPQCQY+LD+S + YALL+AS+SLT+LI+ HWN+FTPPQRV+IRNY+L YL GP L +V TSLIQ++CR+TK GWFDD +HRE+V V +FLQ
Sbjct: 1 MDANQLRELETLCRVLYESTNEVERAHAQQAVLILQSSAEYIPQCQYVLDNSSSPYALLVASNSLTKLITTHWNNFTPPQRVDIRNYVLGYLAQHGPTLEKFVTTSLIQMVCRLTKYGWFDDEQHREIVTEVTKFLQ 137
BLAST of mRNA_H-elongata_contig7690.15361.1 vs. uniprot
Match: D0P208_PHYIT (Exportin-like protein n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0P208_PHYIT) HSP 1 Score: 177 bits (449), Expect = 2.500e-49 Identity = 84/137 (61.31%), Postives = 109/137 (79.56%), Query Frame = 1
Query: 7 MDAAQLAQVESLCETLYNSVDEAARSHAQNQLLSLQASAERIPQCQYILDHSENAYALLLASSSLTRLISNHWNSFTPPQRVEIRNYILNYLGSVGPNLTDYVKTSLIQLLCRITKLGWFDDPRHREVVDAVMRFLQ 417
MDA QL ++E+LC LY S +E R+HAQ +L LQ+SAE IPQCQY+LD+S + YALL+AS+SLT+LI++HWN+FT PQRV+IRNY+L YL GP L +V TSLIQ++CR+TK GWFDD +HRE+V V +FLQ
Sbjct: 1 MDANQLRELETLCRVLYESGNEVERAHAQQAVLILQSSAEYIPQCQYVLDNSSSPYALLVASTSLTKLITSHWNNFTTPQRVDIRNYVLGYLAQKGPTLEKFVTTSLIQMVCRLTKYGWFDDEQHREIVAEVTKFLQ 137
BLAST of mRNA_H-elongata_contig7690.15361.1 vs. uniprot
Match: H3GGA7_PHYRM (Importin N-terminal domain-containing protein n=22 Tax=Peronosporaceae TaxID=4777 RepID=H3GGA7_PHYRM) HSP 1 Score: 177 bits (450), Expect = 6.540e-49 Identity = 84/137 (61.31%), Postives = 110/137 (80.29%), Query Frame = 1
Query: 7 MDAAQLAQVESLCETLYNSVDEAARSHAQNQLLSLQASAERIPQCQYILDHSENAYALLLASSSLTRLISNHWNSFTPPQRVEIRNYILNYLGSVGPNLTDYVKTSLIQLLCRITKLGWFDDPRHREVVDAVMRFLQ 417
MDA QL ++E+LC LY S +E+ R+HAQ +L LQ+SAE IPQCQY+LD+S + YALL+AS+SLT+LI++HWN+FT PQRV+IRNY+L YL GP L +V TSLIQ++CR+TK GWFDD +HRE+V V +FLQ
Sbjct: 1 MDANQLRELETLCRVLYESGNESERAHAQQAVLILQSSAEYIPQCQYVLDNSSSPYALLVASTSLTKLITSHWNNFTTPQRVDIRNYVLGYLAQKGPTLEKFVTTSLIQMVCRLTKYGWFDDEQHREIVAEVTKFLQ 137 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig7690.15361.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig7690.15361.1 >prot_H-elongata_contig7690.15361.1 ID=prot_H-elongata_contig7690.15361.1|Name=mRNA_H-elongata_contig7690.15361.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=142bp MDAAQLAQVESLCETLYNSVDEAARSHAQNQLLSLQASAERIPQCQYILDback to top mRNA from alignment at H-elongata_contig7690:418..849- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig7690.15361.1 ID=mRNA_H-elongata_contig7690.15361.1|Name=mRNA_H-elongata_contig7690.15361.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=432bp|location=Sequence derived from alignment at H-elongata_contig7690:418..849- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig7690:418..849- >mRNA_H-elongata_contig7690.15361.1 ID=mRNA_H-elongata_contig7690.15361.1|Name=mRNA_H-elongata_contig7690.15361.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=852bp|location=Sequence derived from alignment at H-elongata_contig7690:418..849- (Himanthalia elongata Himel1 dioecious)back to top |