mRNA_H-elongata_contig75975.15280.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig75975.15280.1 vs. uniprot
Match: A0A1Y1LKC7_PHOPY (USP domain-containing protein (Fragment) n=1 Tax=Photinus pyralis TaxID=7054 RepID=A0A1Y1LKC7_PHOPY) HSP 1 Score: 121 bits (304), Expect = 2.490e-32 Identity = 59/130 (45.38%), Postives = 83/130 (63.85%), Query Frame = 1
Query: 1 QEHRRAYKEMSLWRLPPVLVLHLKRFSYTYGGWASSGEKIESFVTFPVSELDPPGSPGEVKAKTEDVYDLCGVVNHHGMLNGGHYTAFALNERDGRWYDFSDDQVSTIDHEEDLVTAAAYVLFYRRRGRG 390
+EHRRA K+ LW+ P +LV HLKRFS + GW +K++ V FP+ LD + + ++YDL GV +H+G L GGHYTA+A N DGRWY+++D V + ++T+AAY+LFYRRR G
Sbjct: 59 KEHRRASKKFDLWKTPDILVAHLKRFSSS--GWRR--DKLDVLVDFPIEGLDLTSRVIQKEDGKAEIYDLIGVDDHYGGLGGGHYTAYAKNFVDGRWYNYNDSSVHVVSDPTSVITSAAYLLFYRRRSSG 184
BLAST of mRNA_H-elongata_contig75975.15280.1 vs. uniprot
Match: A0A2C5XUR1_9HYPO (Uncharacterized protein n=2 Tax=Ophiocordyceps australis TaxID=1399860 RepID=A0A2C5XUR1_9HYPO) HSP 1 Score: 127 bits (319), Expect = 1.710e-31 Identity = 63/130 (48.46%), Postives = 83/130 (63.85%), Query Frame = 1
Query: 1 QEHRRAYKEMSLWRLPPVLVLHLKRFSYTYGGWASSGEKIESFVTFPVSELDPPGSPGEVKAKTEDVYDLCGVVNHHGMLNGGHYTAFALNERDGRWYDFSDDQVSTIDHEEDLVTAAAYVLFYRRRGRG 390
+EHRRA K+ LW+ P +LV HLKRFS + GW EK+++FV FPV LD + + ++YDL V +H+G L GGHYTA+A N DGRWY F+D V + +VT+AAY+LFYRRR G
Sbjct: 1097 KEHRRASKKFDLWKTPDILVAHLKRFSNS--GWRR--EKLDTFVDFPVENLDLTSRVVQKEDGKNEIYDLIAVDDHYGGLGGGHYTAYAKNFMDGRWYSFNDSSVHAVSDAGSVVTSAAYLLFYRRRSSG 1222
BLAST of mRNA_H-elongata_contig75975.15280.1 vs. uniprot
Match: W9CBM0_SCLBF (Uncharacterized protein n=1 Tax=Sclerotinia borealis (strain F-4128) TaxID=1432307 RepID=W9CBM0_SCLBF) HSP 1 Score: 127 bits (319), Expect = 1.730e-31 Identity = 62/130 (47.69%), Postives = 86/130 (66.15%), Query Frame = 1
Query: 1 QEHRRAYKEMSLWRLPPVLVLHLKRFSYTYGGWASSG---EKIESFVTFPVSELDPPGSPGEVKAKTEDVYDLCGVVNHHGMLNGGHYTAFALNERDGRWYDFSDDQVSTIDHEEDLVTAAAYVLFYRRR 381
+EHRRA K+ +WR P +L++HLKRFS SSG +K++ V FP++ELD E + E++YDL + NHHG L GGHYTAFA N DG WY+++D V+ I + ++TA+AY+LFYRRR
Sbjct: 1330 KEHRRASKKFEIWRTPDILIVHLKRFS-------SSGLRRDKLDGLVEFPINELDLSSRVIESQDGKEEIYDLIAIDNHHGGLGGGHYTAFAKNFVDGEWYEYNDTSVAKITNPSRMITASAYLLFYRRR 1452
BLAST of mRNA_H-elongata_contig75975.15280.1 vs. uniprot
Match: A0A197KFN0_9FUNG (Ubiquitinyl hydrolase 1 n=1 Tax=Linnemannia elongata AG-77 TaxID=1314771 RepID=A0A197KFN0_9FUNG) HSP 1 Score: 127 bits (318), Expect = 2.350e-31 Identity = 61/127 (48.03%), Postives = 89/127 (70.08%), Query Frame = 1
Query: 1 QEHRRAYKEMSLWRLPPVLVLHLKRFSYTYGGWASSGEKIESFVTFPVSELDPPGSPGEVKAKTEDVYDLCGVVNHHGMLNGGHYTAFALNERDGRWYDFSDDQVSTIDHEEDLVTAAAYVLFYRRR 381
++H++A K++ +WRLP +LV+HLKRFS+T W +KI++ V FP+ LD G + + + E+VYDL GV NH G L GGHYTA+A NE+ G WY+F D VS + + E + +++AY+LFYRRR
Sbjct: 1140 KKHQQATKKLDIWRLPDILVVHLKRFSHTRT-WR---DKIDALVDFPIHGLDLSGKILKEEDRNENVYDLFGVSNHMGGLGGGHYTAYAKNEKTGDWYNFDDSHVSAVGNVESIKSSSAYLLFYRRR 1262
BLAST of mRNA_H-elongata_contig75975.15280.1 vs. uniprot
Match: A0A7S0TY16_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0TY16_HEMAN) HSP 1 Score: 118 bits (295), Expect = 3.990e-31 Identity = 67/132 (50.76%), Postives = 83/132 (62.88%), Query Frame = 1
Query: 1 QEHRRAYKEMSLWRLPPVLVLHLKRFSYTYGGWASS---GEKIESFVTFPVSELDPPGSPGEVKAKTED-VYDLCGVVNHHGMLNGGHYTAFALNERDGRWYDFSDDQVSTIDHEEDLVTAAAYVLFYRRRG 384
++H+RA KEM+LW P L++HLKRFS GG + S +KIE+ VTFPV LD + +D VYDL GVVNH G GHYTA+ L+ DG+W+ F D VS D+VT AAYVLFYRRRG
Sbjct: 30 KQHQRASKEMALWSAPTELIIHLKRFSQHEGGSSFSLFSSDKIETLVTFPVKGLDISHYVRSPSLQGQDLVYDLHGVVNHFGGSGFGHYTAYCLSPGDGKWHLFDDSTVSPAS-ASDVVTPAAYVLFYRRRG 160
BLAST of mRNA_H-elongata_contig75975.15280.1 vs. uniprot
Match: A0A0Q3L0A9_BRADI (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Brachypodium distachyon TaxID=15368 RepID=A0A0Q3L0A9_BRADI) HSP 1 Score: 124 bits (311), Expect = 1.990e-30 Identity = 57/126 (45.24%), Postives = 83/126 (65.87%), Query Frame = 1
Query: 1 QEHRRAYKEMSLWRLPPVLVLHLKRFSYTYGGWASSGEKIESFVTFPVSELDPPGSPGEVKAKTEDVYDLCGVVNHHGMLNGGHYTAFALNERDGRWYDFSDDQVSTIDHEEDLVTAAAYVLFYRR 378
+EHR+A K++ LWRLP +L++HLKRFSY+ + K+++FV FP+ +LD + + + Y L V NH+G + GGHYTA+ +E + RWYDF D V +D E+ + T+AAYVLFYRR
Sbjct: 759 KEHRQASKKLDLWRLPEILIIHLKRFSYS----RYTKNKLDTFVDFPIHDLDLSKFVRDRSGQLSNHYQLYAVSNHYGSMGGGHYTAYVFHEGEKRWYDFDDRSVERVDKEDSIKTSAAYVLFYRR 880
BLAST of mRNA_H-elongata_contig75975.15280.1 vs. uniprot
Match: A0A2N6NRR1_BEABA (Ubiquitin carboxyl-terminal hydrolase 12 n=5 Tax=Beauveria TaxID=5581 RepID=A0A2N6NRR1_BEABA) HSP 1 Score: 124 bits (311), Expect = 2.060e-30 Identity = 60/127 (47.24%), Postives = 84/127 (66.14%), Query Frame = 1
Query: 1 QEHRRAYKEMSLWRLPPVLVLHLKRFSYTYGGWASSGEKIESFVTFPVSELDPPGSPGEVKAKTEDVYDLCGVVNHHGMLNGGHYTAFALNERDGRWYDFSDDQVSTIDHEEDLVTAAAYVLFYRRR 381
+EHRRA K+ LW+ P LV HLKRFS + GW +K++ V FP+ ELD E + +VYDL V NH+G L GGHYTA+A N DG+WY+++D VS + + + ++T+AAY+LFY+RR
Sbjct: 1265 KEHRRASKKFDLWKTPNYLVTHLKRFSSS--GWRR--DKLDVLVDFPIEELDLTARVVEKEDGKSEVYDLIAVDNHYGGLGGGHYTAYAKNFVDGKWYNYNDSSVSVVSNTQSIITSAAYLLFYKRR 1387
BLAST of mRNA_H-elongata_contig75975.15280.1 vs. uniprot
Match: A0A453JK26_AEGTS (USP domain-containing protein n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453JK26_AEGTS) HSP 1 Score: 120 bits (301), Expect = 2.580e-30 Identity = 55/126 (43.65%), Postives = 84/126 (66.67%), Query Frame = 1
Query: 1 QEHRRAYKEMSLWRLPPVLVLHLKRFSYTYGGWASSGEKIESFVTFPVSELDPPGSPGEVKAKTEDVYDLCGVVNHHGMLNGGHYTAFALNERDGRWYDFSDDQVSTIDHEEDLVTAAAYVLFYRR 378
+EHR+A K++ LWRLP +L++HLKRFSY+ + K++++V FP+ +LD + + + Y L V NH+G + GGHYTA+ N+ +WYDF D VS +++E+ + T+AAYVLFYRR
Sbjct: 209 KEHRQASKKLDLWRLPEILIIHLKRFSYS----RYTKNKLDTYVDFPIHDLDLSSYIRDRSGQMSNHYQLYAVSNHYGSMGGGHYTAYVYNDGKKKWYDFDDRCVSGLENEDSIKTSAAYVLFYRR 330
BLAST of mRNA_H-elongata_contig75975.15280.1 vs. uniprot
Match: A0A446TTW2_TRITD (USP domain-containing protein n=3 Tax=Triticinae TaxID=1648030 RepID=A0A446TTW2_TRITD) HSP 1 Score: 120 bits (301), Expect = 2.580e-30 Identity = 55/126 (43.65%), Postives = 84/126 (66.67%), Query Frame = 1
Query: 1 QEHRRAYKEMSLWRLPPVLVLHLKRFSYTYGGWASSGEKIESFVTFPVSELDPPGSPGEVKAKTEDVYDLCGVVNHHGMLNGGHYTAFALNERDGRWYDFSDDQVSTIDHEEDLVTAAAYVLFYRR 378
+EHR+A K++ LWRLP +L++HLKRFSY+ + K++++V FP+ +LD + + + Y L V NH+G + GGHYTA+ N+ +WYDF D VS +++E+ + T+AAYVLFYRR
Sbjct: 195 KEHRQASKKLDLWRLPEILIIHLKRFSYS----RYTKNKLDTYVDFPIHDLDLSSYIRDRSGQMSNHYQLYAVSNHYGSMGGGHYTAYVYNDGKKKWYDFDDRCVSGLENEDSIKTSAAYVLFYRR 316
BLAST of mRNA_H-elongata_contig75975.15280.1 vs. uniprot
Match: A0A545VXI3_9HYPO (Ubiquitin C-terminal hydrolase n=1 Tax=Cordyceps javanica TaxID=43265 RepID=A0A545VXI3_9HYPO) HSP 1 Score: 123 bits (308), Expect = 5.240e-30 Identity = 60/130 (46.15%), Postives = 83/130 (63.85%), Query Frame = 1
Query: 1 QEHRRAYKEMSLWRLPPVLVLHLKRFSYTYGGWASSGEKIESFVTFPVSELDPPGSPGEVKAKTEDVYDLCGVVNHHGMLNGGHYTAFALNERDGRWYDFSDDQVSTIDHEEDLVTAAAYVLFYRRRGRG 390
+EHRRA K+ LW+ P LV HLKRFS + GW +K++ V FP+ ELD E + +VYDL V +H+G L GGHYTA+A N DGRWY+++D S + + ++T+AAY+LFY+RR G
Sbjct: 1300 KEHRRASKKFDLWKTPDYLVAHLKRFSSS--GWRR--DKLDVLVDFPIEELDLTARVVEKEEGKSEVYDLIAVDDHYGGLGGGHYTAYAKNFVDGRWYNYNDSSASLVSDPQSVITSAAYLLFYKRRASG 1425 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig75975.15280.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig75975.15280.1 >prot_H-elongata_contig75975.15280.1 ID=prot_H-elongata_contig75975.15280.1|Name=mRNA_H-elongata_contig75975.15280.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=121bp MSLWRLPPVLVLHLKRFSYTYGGWASSGEKIESFVTFPVSELDPPGSPGEback to top mRNA from alignment at H-elongata_contig75975:738..1794+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig75975.15280.1 ID=mRNA_H-elongata_contig75975.15280.1|Name=mRNA_H-elongata_contig75975.15280.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1057bp|location=Sequence derived from alignment at H-elongata_contig75975:738..1794+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig75975:738..1794+ >mRNA_H-elongata_contig75975.15280.1 ID=mRNA_H-elongata_contig75975.15280.1|Name=mRNA_H-elongata_contig75975.15280.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=726bp|location=Sequence derived from alignment at H-elongata_contig75975:738..1794+ (Himanthalia elongata Himel1 dioecious)back to top |