mRNA_H-elongata_contig7567.15256.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig7567.15256.1
Unique NamemRNA_H-elongata_contig7567.15256.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig7567.15256.1 vs. uniprot
Match: A0A6H5K688_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K688_9PHAE)

HSP 1 Score: 311 bits (797), Expect = 2.040e-91
Identity = 185/319 (57.99%), Postives = 207/319 (64.89%), Query Frame = 3
Query:  255 FSPFLFFGCELKNRFDGTLFRFPLRVGDVARDSEISHASYTPDVVVELLNQFKETAHRYLLFMRHVQRIEVYTFKTG--DPAPVLWYDVGVTKREPRSGWLTVPYFVSGHPRRPISKEAFYNKLAQTPDSALPKVDQLVTITFRQEAERVKRVAALGTPAATLLNSVASPATASSSTPTWGRGTEKGDDKGVE-----VGGGSESESELVEVGDVGAEGGSXXXXXXXXXDESRKA--TSIVDVFLVCAAIGGGQAKAMACHPEGRAMKFIPWGGVAAHVSRNSQPPSAFEGHAFCFLPLPVTTLLPVHVNGFFELSTN 1184
            FSP+LFFGCELK  F GTLFRFPLR   VARDSEISHASY+P+ V+ LLNQFKE A RYLLF+RHV+RIE+YT   G  +  PVL Y V VTKR+P +GW  VP FV+G PRRP+SKEAFY+KL QTPD+ LPKV+Q+VTITFR+E  R                                       D+ +       GG                +G  XX XXXXXX    K   TSIVDVFLVCAAIGGG AK MAC PE R MK IPWGGVAAH+SRNS PP  FEGHAFCFLPLPV TLLPVHVNGFFELS+N
Sbjct:  549 FSPYLFFGCELKKHFKGTLFRFPLRTATVARDSEISHASYSPESVMNLLNQFKEQASRYLLFLRHVERIEMYTVGDGADNKTPVLQYSVEVTKRDPPTGWAAVPTFVTGPPRRPLSKEAFYSKLGQTPDAVLPKVEQMVTITFREEGARRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEDLRGLTSATGGXXXXXXXXXXXXXALVDGXXXXKXXXXXXXXXXKEGPTSIVDVFLVCAAIGGGNAKKMACLPEHRHMKLIPWGGVAAHISRNSHPPPPFEGHAFCFLPLPVNTLLPVHVNGFFELSSN 867          
BLAST of mRNA_H-elongata_contig7567.15256.1 vs. uniprot
Match: D8LJG5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJG5_ECTSI)

HSP 1 Score: 306 bits (785), Expect = 7.880e-90
Identity = 179/314 (57.01%), Postives = 198/314 (63.06%), Query Frame = 3
Query:  255 FSPFLFFGCELKNRFDGTLFRFPLRVGDVARDSEISHASYTPDVVVELLNQFKETAHRYLLFMRHVQRIEVYTFKTG--DPAPVLWYDVGVTKREPRSGWLTVPYFVSGHPRRPISKEAFYNKLAQTPDSALPKVDQLVTITFRQEAERVKRVAALGTPAATLLNSVASPATASSSTPTWGRGTEKGDDKGVEVGGGSESESELVEVGDVGAEGGSXXXXXXXXXDESRKATSIVDVFLVCAAIGGGQAKAMACHPEGRAMKFIPWGGVAAHVSRNSQPPSAFEGHAFCFLPLPVTTLLPVHVNGFFELSTNRR 1190
            FSP+LFFGCELK  F GTLFRFPLR   VARDSEISHASY+P  V+ LLNQFKE A RYLLF+RHV+RIE+YT   G  +  PVL Y V VTKR+P +GW  VP FV+G PRRP+SKEAFY+KL QTPD+ LPKV+Q+VTITFR+E  R +                                                                 XXX   XX       TSIVDVFLVCAAIGGG AK MAC PE R MK IPWGGVAAH+SRNS PP  FEGHAFCFLPLPV TLLPVHVNGFFELS+NRR
Sbjct: 1210 FSPYLFFGCELKKHFKGTLFRFPLRTATVARDSEISHASYSPGSVMNLLNQFKEQASRYLLFLRHVERIEMYTVGDGVDNKTPVLQYSVEVTKRDPPTGWAAVPTFVTGPPRRPLSKEAFYSKLGQTPDAVLPKVEQMVTITFREEGAR-RXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVVXXAGGKEGPTSIVDVFLVCAAIGGGNAKKMACLPEHRHMKLIPWGGVAAHISRNSHPPPPFEGHAFCFLPLPVNTLLPVHVNGFFELSSNRR 1522          
BLAST of mRNA_H-elongata_contig7567.15256.1 vs. uniprot
Match: A0A835YL62_9STRA (RING-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YL62_9STRA)

HSP 1 Score: 223 bits (568), Expect = 7.470e-61
Identity = 144/347 (41.50%), Postives = 176/347 (50.72%), Query Frame = 3
Query:  255 FSPFLFFGCELKNRFDGTLFRFPLRVGDVARDSEISHASYTPDVVVELLNQFKETAHRYLLFMRHVQRIEVYTFKTGDPAP-------------------VLWYDVGVTKRE----PR------------SGWLTVPYFVSGHPRRPISKEAFYNKLAQTPDSALPKVDQLVTITFRQEAERVKRVAALGTPAATLLNSVASPATASSSTPTWGRGTEKGDDKGVEVGGGSESESELVEVGDVGAEGGSXXXXXXXXXDESRKATSIVDVFLVCAAIGGGQAKAMACHPEGRAMKFIPWGGVAAHVSRNSQPPSAFEGHAFCFLPLPVTTLLPVHVNGFFELSTNRR 1190
            FSP+L FGC+ K RF GTLFRFPLR   VARDSEISH  Y P  V ELL+ FKETAHR+LLF+R VQRIEVY     D AP                   V+W +V     +    PR              W  +P F+        SKEAFY++LA TP+  LP+  Q VTI F+   +     AA   P A    +  +PATA S+TP+                                    S          E      I DVF+VC  +G G+A+A AC P+ R +KF+PWGGVAAH++RN +P     G AFCFLPLPV   LPVHVNG+FELS+NRR
Sbjct: 1848 FSPYLHFGCDFKKRFPGTLFRFPLRTKAVARDSEISHTCYGPHEVKELLDGFKETAHRFLLFLRSVQRIEVYVLGDEDEAPRCVDPKYFNLNLLRRDSSAVVWMEVRSVAAQSGCIPRLQHHVEIAHRSNQQWDAIPRFIKEATGGSNSKEAFYSRLAHTPEGQLPRTLQTVTINFKHAPQLRAGAAA---PLAITAEAGDTPATAPSATPSTAXXXXX---------------XXXXXXXXXXXXXPSAGAALALTAPEGPANEDIEDVFMVCVQLGAGRARAFACDPQQRDLKFLPWGGVAAHLTRNGKPIERTRGKAFCFLPLPVDAGLPVHVNGYFELSSNRR 2176          
BLAST of mRNA_H-elongata_contig7567.15256.1 vs. uniprot
Match: A0A7S3QAL4_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QAL4_9STRA)

HSP 1 Score: 182 bits (463), Expect = 6.250e-47
Identity = 117/349 (33.52%), Postives = 160/349 (45.85%), Query Frame = 3
Query:  261 PFLFFGCELKNRFDGTLFRFPLRVGDVARDSEISHASYTPDVVV-ELLNQFKETAHRYLLFMRHVQRIEVYTFKTGDPAPVLWY--DVGV--------TKREPRSG----------------------------WLTVPYFVSGHPRRPISKEAFYNKLAQTPDSALPKVDQLVTITFRQEAERVKRVAALGTPAATLLNSVASPATASSSTPTWGRGTEKGDDKGVEVGGGSESESELVEVGDVGAEGGSXXXXXXXXXDESRKATSIVDVFLVCAAIGGGQAKAMACHPEGRAMKFIPWGGVAAHVSRNSQPPSAFEGHAFCFLPLPVTTLLPVHVNGFFELSTNRR 1190
            P+  FG ++K RF+GTLFRFP R    A++SEIS   Y  DV   EL++ FK    + +LF+RHV+R+E Y     D AP L Y  DVG          KR   S                             W ++  F+SG+  +PISKEAFY+KL +TP+  LP+   LVTITF +  +  +  + +                                                                      E R+ T   D +L+C+A+G GQ +AMAC+P+ R +KF+PWG VA H++RN + P    G+AFCFLPLP  T   VH+NG+FELS NRR
Sbjct: 1630 PYCLFGNDMKQRFNGTLFRFPFRNEKTAKESEISKKQYGDDVATKELIDSFKNVISKVVLFLRHVKRVEFYVEGESDQAPKLQYYADVGERKALSETHAKRSSTSNMSGLESIRSLANSAVFGGSTTQPIQSDHWNSISNFISGNESQPISKEAFYSKLLRTPEQQLPQTKHLVTITFGENTQFTQETSNIA---------------------------------------------------------------------EERQITR-TDKYLICSALGSGQCRAMACNPKHRDLKFLPWGSVAVHLTRNEESPPNERGNAFCFLPLPSETGFAVHINGYFELSANRR 1908          
BLAST of mRNA_H-elongata_contig7567.15256.1 vs. uniprot
Match: A0A7S2VVU2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Triparma pacifica TaxID=91992 RepID=A0A7S2VVU2_9STRA)

HSP 1 Score: 176 bits (445), Expect = 1.480e-44
Identity = 111/316 (35.13%), Postives = 153/316 (48.42%), Query Frame = 3
Query:  255 FSPFLFFGCELKNRFDGTLFRFPLRVGDVARDSEISHASYTPDVVVELLNQFKETAHRYLLFMRHVQRIEVYTFKTGDPAPVLWYDVGVTKREPRSG----WLTVPYFVSGHPRRPISKEAFYNKLAQTPDSALPKVDQLVTITFRQEAERVKRVAALGTPAATLLNSVASPATASSSTPTWGRGTEKGDDKGVEVGGGSESESELVEVGDVGAEGGSXXXXXXXXXDESRKATSIVDVFLVCAAIGGGQAKAMACHPEGRAMKFIPWGGVAAHVSRNSQPPSAFEGHAFCFLPLPVTTLLPVHVNGFFELSTNRR 1190
            F P+  FGC++K+RF GTLFRFPLR    A +SEIS  ++    + ELL+ F+ T  ++LLF+R+V+ +EVY       +P L Y   V  R+P +     W  V  F++G P  P+SK+AFY+KL  TP+++LP+   LVTI+F                                STP+                                                   A +  D ++VC  +GG + K  AC  + R MKF+PWGGVAA +S+         G+AFCFLPLPV T +PVHVNG+FELS NRR
Sbjct: 1267 FLPYCKFGCDMKSRFKGTLFRFPLRDQVTAVESEISKTTFGDRELQELLDTFQSTLPKFLLFLRNVKTVEVYLEDQNSASPSLLYSATVASRKPLTKPPTKWSAVSDFITGPPSNPLSKQAFYSKLQATPENSLPRSHHLVTISF--------------------------------STPS---------------------------------------------------APTEEDKYIVCVGLGGRKCKEFACDEKYRHMKFLPWGGVAAKMSKT------LRGNAFCFLPLPVETGMPVHVNGYFELSANRR 1493          
BLAST of mRNA_H-elongata_contig7567.15256.1 vs. uniprot
Match: A0A7S2UD61_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UD61_9STRA)

HSP 1 Score: 169 bits (429), Expect = 1.890e-42
Identity = 105/328 (32.01%), Postives = 151/328 (46.04%), Query Frame = 3
Query:  258 SPFLFFGCELKNRFDGTLFRFPLRVGDVARDSEISHASYTPDVVVE-LLNQFKETAHRYLLFMRHVQRIEVYTF-KTGDPAPVLWYDVGVTKRE----------PRSGWLTVPYFVSGHPRRPISKEAFYNKLAQTPDSALPKVDQLVTI-----TFRQEAERVKRVAALGTPAATLLNSVASPATASSSTPTWGRGTEKGDDKGVEVGGGSESESELVEVGDVGAEGGSXXXXXXXXXDESRKATSIVDVFLVCAAIGGGQAKAMACHPEGRAMKFIPWGGVAAHVSRNSQPPSAFEGHAFCFLPLPVTTLLPVHVNGFFELSTNRR 1190
            SP+  FGC+++ +F GTLFRFP R    A +SEIS      D  ++ L++ FK+   +YLLF+R+V+RIEVYT     D  P L Y   VTKR+            +GW ++  F+ G    P++KE+FY+KL +TP   LPK   +V+I     T + + + +K                                    D+K                                    E+    +I D +L+C A+GGG  +   C    R +K +PWGG AA + R+        G+AFC LPLP  T+LP+H+NG FELS NRR
Sbjct:  440 SPYCHFGCDMQTKFQGTLFRFPFRTESTAAESEISKTQCAKDGAIDGLVDSFKKVISKYLLFLRNVKRIEVYTEGPNADDKPQLAYFAAVTKRDVVYEKTANSNSATGWNSITDFIKGPQSHPLTKESFYSKLQRTPVDMLPKTKHVVSIQSVYNTMKPDIQSIKS-----------------------------------DNKEAH--------------------------------QETNDPVTITDEYLICMALGGGSCRTFVCEENNRDLKLLPWGGCAALLRRDGSDAPLLNGNAFCGLPLPAQTMLPLHLNGMFELSANRR 700          
BLAST of mRNA_H-elongata_contig7567.15256.1 vs. uniprot
Match: A0A329RM56_9STRA (Uncharacterized protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329RM56_9STRA)

HSP 1 Score: 158 bits (399), Expect = 1.720e-38
Identity = 118/322 (36.65%), Postives = 159/322 (49.38%), Query Frame = 3
Query:  255 FSPFL-FFGCELKNRFDGTLFRFPLRVGDVARDSEISHASYTPDVVVELLNQFKETAHRYLLFMRHVQRIEVYTFKTGDPAPVLWYDVGVTKREPRSGWLTVPYFVSGHPRRPIS---------KEAFYNKLAQTPDSALPKVDQLVTITFRQEAERVKRVAALGTPAATLLNSVASPATASSSTPTWGRGTEKGDDKGVEVGGGSESESELVEVGDVGAEGGSXXXXXXXXXDESRKATSIVDVFLVCAAIGGGQAKAMACHPEGRAMKFIPWGGVAAHVSRNSQPPSAFEGHAFCFLPLPVTTLLPVHVNGFFELSTNRR 1190
            F+PF   FGC+L++ + GTLFRFPLR   +A  SEI    Y+   +VEL   F+ +    LLF+R+V+++EVY     D  PVL YD  V K +    W  +  F+  H   P S         K  FY +L  TP   LP V Q++ I  RQ+ E  +                           ++GR        G+ +   S+ ESE VE+ D+               +ES       + +LVC  IGGG+A+ MAC  E  ++K IPW G+A   SR    P+  EG AFCFLPLPV   LPVHVNG+FELS+NRR
Sbjct: 1688 FAPFKGVFGCDLEHHYKGTLFRFPLRDSSLAESSEIKRRGYSHREIVELFKSFQASIIDTLLFLRNVRKVEVYYQPEIDQPPVLLYDAEVPKEDRGESWREIDRFMR-HNESPSSTSGTTELSAKREFYARLRSTPKEELPSVTQVLHIRRRQQKELQE---------------------------SFGR-------FGIAM---SQQESE-VEMDDL--------------MEES------TEKYLVCNQIGGGKARDMACAAENESLKLIPWVGIA---SRIDGVPT--EGRAFCFLPLPVRVGLPVHVNGYFELSSNRR 1945          
BLAST of mRNA_H-elongata_contig7567.15256.1 vs. uniprot
Match: W2NNW2_PHYPR (UBA domain-containing protein n=1 Tax=Phytophthora parasitica TaxID=4792 RepID=W2NNW2_PHYPR)

HSP 1 Score: 156 bits (395), Expect = 5.200e-38
Identity = 107/319 (33.54%), Postives = 146/319 (45.77%), Query Frame = 3
Query:  255 FSPFL-FFGCELKNRFDGTLFRFPLRVGDVARDSEISHASYTPDVVVELLNQFKETAHRYLLFMRHVQRIEVYTFKTGDPAPVLWYDVGVTKREPRSGWLTVPYFV------SGHPRRPISKEAFYNKLAQTPDSALPKVDQLVTITFRQEAERVKRVAALGTPAATLLNSVASPATASSSTPTWGRGTEKGDDKGVEVGGGSESESELVEVGDVGAEGGSXXXXXXXXXDESRKATSIVDVFLVCAAIGGGQAKAMACHPEGRAMKFIPWGGVAAHVSRNSQPPSAFEGHAFCFLPLPVTTLLPVHVNGFFELSTNRR 1190
            F+PF   FGC+L++ + GTLFRFPLR   +A  SEI    Y+   +VEL   F+ +    LLF+R+V+++EVY     D +PVL YD  V + +    W  +  F+      SG       +E FY +L  TP   LP V Q++ I  RQ+ E        GT                                       S  ESE+                     +   +     + +LVC  IGGG+A+ MAC  E  ++K IPW G+A+ +          EG AFCFLPLPV   LPVHVNG+FELS+NRR
Sbjct: 1688 FAPFKGVFGCDLEHHYKGTLFRFPLRDSTLAESSEIKRRGYSHREIVELFKSFQASIIDTLLFLRNVRKVEVYFQPEIDQSPVLLYDAEVPEEDRGESWREIDRFMRNTESTSGTTELSAKRE-FYARLRSTPTQELPSVSQVLHIRRRQQKELQDSFHRFGTVT-------------------------------------SHQESEV---------------------EMDHRMEETTEKYLVCNQIGGGKARDMACAAENESLKLIPWVGIASRIDEEPM-----EGRAFCFLPLPVRVGLPVHVNGYFELSSNRR 1942          
BLAST of mRNA_H-elongata_contig7567.15256.1 vs. uniprot
Match: W2RAY0_PHYPN (Uncharacterized protein n=38 Tax=Phytophthora TaxID=4783 RepID=W2RAY0_PHYPN)

HSP 1 Score: 156 bits (395), Expect = 5.760e-38
Identity = 107/319 (33.54%), Postives = 146/319 (45.77%), Query Frame = 3
Query:  255 FSPFL-FFGCELKNRFDGTLFRFPLRVGDVARDSEISHASYTPDVVVELLNQFKETAHRYLLFMRHVQRIEVYTFKTGDPAPVLWYDVGVTKREPRSGWLTVPYFV------SGHPRRPISKEAFYNKLAQTPDSALPKVDQLVTITFRQEAERVKRVAALGTPAATLLNSVASPATASSSTPTWGRGTEKGDDKGVEVGGGSESESELVEVGDVGAEGGSXXXXXXXXXDESRKATSIVDVFLVCAAIGGGQAKAMACHPEGRAMKFIPWGGVAAHVSRNSQPPSAFEGHAFCFLPLPVTTLLPVHVNGFFELSTNRR 1190
            F+PF   FGC+L++ + GTLFRFPLR   +A  SEI    Y+   +VEL   F+ +    LLF+R+V+++EVY     D +PVL YD  V + +    W  +  F+      SG       +E FY +L  TP   LP V Q++ I  RQ+ E        GT                                       S  ESE+                     +   +     + +LVC  IGGG+A+ MAC  E  ++K IPW G+A+ +          EG AFCFLPLPV   LPVHVNG+FELS+NRR
Sbjct: 1718 FAPFKGVFGCDLEHHYKGTLFRFPLRDSTLAESSEIKRRGYSHREIVELFKSFQASIIDTLLFLRNVRKVEVYFQPEIDQSPVLLYDAEVPEEDRGESWREIDRFMRNTESTSGTTELSAKRE-FYARLRSTPTQELPSVSQVLHIRRRQQKELQDSFHRFGTVT-------------------------------------SHQESEV---------------------EMDHRMEETTEKYLVCNQIGGGKARDMACAAENESLKLIPWVGIASRIDEEPM-----EGRAFCFLPLPVRVGLPVHVNGYFELSSNRR 1972          
BLAST of mRNA_H-elongata_contig7567.15256.1 vs. uniprot
Match: A0A7S1TYE3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TYE3_9STRA)

HSP 1 Score: 156 bits (394), Expect = 7.580e-38
Identity = 106/315 (33.65%), Postives = 147/315 (46.67%), Query Frame = 3
Query:  255 FSPFLFFGCELKNRFDGTLFRFPLRVGDVARDSEISHASYTPDVVVELLNQFKETAHRYLLFMRHVQRIEVYTFKTGDPAPVLWYDVGVTKREP--RSGWLTVPYFVSGHPRRPISKEAFYNKLAQTPDSALPKVDQLVTITFRQEAERVKRVAALGTPAATLLNSVASPATASSSTPTWGRGTEKGDDKGVEVGGGSESESELVEVGDVGAEGGSXXXXXXXXXDESRKATSIVDVFLVCAAIGGGQAKAMACHPEGRAMKFIPWGGVAAHVSRNSQPPSA-FEGHAFCFLPLPVTTLLPVHVNGFFELSTNRR 1190
            F+PF+ +GC+L+  F GT+FRFPLR    A++SEIS  SYT D V ELL  F+     +LLF+R+V  IEV   + G       +   + +  P  +   L   Y +  +P +P+SKEAFYNKL    +  LP   QL+ I   Q+                               P +G GT   D +                                   +E  + + +   ++V   +GGG  + MAC P+ R +KFIPW   AA ++ N    +    G AFCFLPLPV T LPVHVNG+FELS+NRR
Sbjct: 1859 FAPFMQYGCDLQRDFQGTVFRFPLRTALQAKESEISSVSYTKDQVHELLEDFRGQVAEFLLFLRNVVNIEVLVKREGADVAQPLFRAELVRAMPGEKRSTLVSDYILGPNPLKPLSKEAFYNKLRLEKERNLPSSTQLLYI---QQTHY----------------------------PGFGPGTGLPDGR-----------------------------------EEDSEPSKVNYTYIVSQLLGGGAVRDMACDPKHRHLKFIPWAATAARLAVNDAVVAEPITGRAFCFLPLPVVTNLPVHVNGYFELSSNRR 2107          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig7567.15256.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K688_9PHAE2.040e-9157.99Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LJG5_ECTSI7.880e-9057.01Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YL62_9STRA7.470e-6141.50RING-type domain-containing protein n=1 Tax=Tribon... [more]
A0A7S3QAL4_9STRA6.250e-4733.52Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A7S2VVU2_9STRA1.480e-4435.13Hypothetical protein (Fragment) n=1 Tax=Triparma p... [more]
A0A7S2UD61_9STRA1.890e-4232.01Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A329RM56_9STRA1.720e-3836.65Uncharacterized protein n=1 Tax=Phytophthora cacto... [more]
W2NNW2_PHYPR5.200e-3833.54UBA domain-containing protein n=1 Tax=Phytophthora... [more]
W2RAY0_PHYPN5.760e-3833.54Uncharacterized protein n=38 Tax=Phytophthora TaxI... [more]
A0A7S1TYE3_9STRA7.580e-3833.65Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig7567contigH-elongata_contig7567:6840..9810 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score144.4
Seed ortholog evalue2.3e-32
Seed eggNOG ortholog2880.D8LJG5
KEGG koko:K17592
GOsGO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005739,GO:0006457,GO:0008150,GO:0009987,GO:0030424,GO:0030425,GO:0030544,GO:0031072,GO:0036477,GO:0042995,GO:0043005,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044087,GO:0044424,GO:0044444,GO:0044463,GO:0044464,GO:0044877,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051087,GO:0051128,GO:0051129,GO:0065007,GO:0070628,GO:0070852,GO:0090083,GO:0090084,GO:0097447,GO:0097458,GO:0120025,GO:0120038
EggNOG free text desc.negative regulation of inclusion body assembly
EggNOG OGs28IDA@1,2QQPY@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01009
Hectar predicted targeting categorymitochondrion
Exons5
Model size1190
Cds size252
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig7567.15256.1prot_H-elongata_contig7567.15256.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig7567 9046..9810 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931162.5078979-UTR-H-elongata_contig7567:6839..69771622931162.5078979-UTR-H-elongata_contig7567:6839..6977Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig7567 6840..6977 -
1691679723.8481193-UTR-H-elongata_contig7567:6839..69771691679723.8481193-UTR-H-elongata_contig7567:6839..6977Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig7567 6840..6977 -
1622931162.5207765-UTR-H-elongata_contig7567:7599..82241622931162.5207765-UTR-H-elongata_contig7567:7599..8224Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig7567 7600..8224 -
1691679723.8601375-UTR-H-elongata_contig7567:7599..82241691679723.8601375-UTR-H-elongata_contig7567:7599..8224Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig7567 7600..8224 -
1622931162.5329306-UTR-H-elongata_contig7567:8428..86011622931162.5329306-UTR-H-elongata_contig7567:8428..8601Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig7567 8429..8601 -
1691679723.8703585-UTR-H-elongata_contig7567:8428..86011691679723.8703585-UTR-H-elongata_contig7567:8428..8601Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig7567 8429..8601 -
1622931162.547955-UTR-H-elongata_contig7567:9043..90451622931162.547955-UTR-H-elongata_contig7567:9043..9045Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig7567 9044..9045 -
1691679723.8872726-UTR-H-elongata_contig7567:9043..90451691679723.8872726-UTR-H-elongata_contig7567:9043..9045Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig7567 9044..9045 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931162.562378-CDS-H-elongata_contig7567:9045..91111622931162.562378-CDS-H-elongata_contig7567:9045..9111Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7567 9046..9111 -
1691679723.8963134-CDS-H-elongata_contig7567:9045..91111691679723.8963134-CDS-H-elongata_contig7567:9045..9111Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7567 9046..9111 -
1622931162.5757134-CDS-H-elongata_contig7567:9624..98101622931162.5757134-CDS-H-elongata_contig7567:9624..9810Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7567 9625..9810 -
1691679723.9046926-CDS-H-elongata_contig7567:9624..98101691679723.9046926-CDS-H-elongata_contig7567:9624..9810Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7567 9625..9810 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig7567.15256.1

>prot_H-elongata_contig7567.15256.1 ID=prot_H-elongata_contig7567.15256.1|Name=mRNA_H-elongata_contig7567.15256.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=84bp
LARLAQASKLDRLSATGRFGLGFNSVYHFTDVPSFVSGEHLVIFDPHTKY
VPGATSVQPGIKIRFAETDLLEQFPDQARAPHY*
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mRNA from alignment at H-elongata_contig7567:6840..9810-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig7567.15256.1 ID=mRNA_H-elongata_contig7567.15256.1|Name=mRNA_H-elongata_contig7567.15256.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2971bp|location=Sequence derived from alignment at H-elongata_contig7567:6840..9810- (Himanthalia elongata Himel1 dioecious)
CTTGCACGCCTTGCTCAGGCGTCGAAGCTCGACAGGCTTTCCGCCACCGG TCGCTTTGGCCTCGGCTTTAACTCTGTCTATCATTTTACCGACGTCCCAA GCTTCGTCTCGGGGGAACACTTGGTGATATTCGACCCTCACACCAAGTAC GTTCCGGGAGCCACGTCTGTACAGCCCGGGATCAAGGTCCGTCGTCCTTC TTTTGTCGTGCGTTATTTTTGCTGATGCTGTTCACAGTGGCTGTTCTAAA ATCAATATTTGGGTGGGGGGCGGGGGTTCTCGTGTCTTGGTGGCGTGCAT ATTGATATCGTCTCGAGAAAGTAAACTGGCTTGCTTTTTAAGTTGACCTG AGGTGCTTCGATGGCGAAGTGTTCTGTAGTGTATCACCTGCATCTTTCAT CGAGCGCCCCTCGGGACTGCCTCTGATTGGTTCGTTCGTGAATGGCTGTG GTACTTTTCAGTCGATTGCCAGAGATCGAGTGATGTGTGGGAGATAGACT CCTGGTGTTGTATTTCTTATCAAGAATGGGAATATCGCCGGCCAACTGGA AACCGATCGCTGGTAGGGTTTGCAAAGGAATAAGATGCGCGTTTCTTTGC TGCCACGTCTCACTAGCCTTGTTCCTCTCCCGCCATTGCCGCCTGCTTTC CTTTCGCAATGATCTTATTCTTAACCGTGACTTTGACCGAATTTTCAAGA TACGGTTCGCGGAGACGGACCTTCTGGAGCAATTTCCAGATCAGGCACGC GCACCACACTATTAATAGTAGTAGTAGTAGTAGTAATAGTGGTGGTAATA TTAGCAATAGTTGTAGTAATATCAGCAATAGTAGCAGTAGTAGTGGTAAT GGTAATAATTATCACGTGTGGTGCTCTACCAGCTCGAGAGCATCGCTTCC CTCCAACTTACAATGTGATTGGTATTTAACGAATTTTAGGGCTCAAATTT GGATGAGGTGCATTCATTCGCGTGTGAAACGTCGAACCTAGGACAAGCAC CAAGGTTATTTAGTTTATTTAACTTTTTCAACGTTTTCCTTTTATTCGGA GCGTTAAACCCTTCTTCCCTCCCTCCCCCGATACCTGACACTAATGAAGT GACGTGCATTTGAAGCGTTTGCGTCCGTCCGTACTTCGGTGATGGAAATG CCCCTGTCTCTTGCCCCCTCCCCCGTATGTGCACGCCTCCGACTCACGAT CACGATCAGTTCTCGCCGTTCCTCTTCTTCGGGTGCGAGCTTAAGAACCG CTTCGACGGGACGCTCTTCCGATTTCCGCTTCGCGTGGGCGACGTTGCCC GCGACAGCGAGATTTCCCACGCGAGCTATACCCCAGATGTCGTGGTGGAG CTGCTCAATCAGTTCAAGGAGACGGCGCACAGGTGAGAAGCACGACGACC CCATGTGTCGGTCGGTGTGAAATGAGTGATCTATGTGTCTCATTAACCCC CTTGTTTAAAGCTTCCGCTTCGCTTATCTTTATGAACCCCCCCCCACCCT ACTGATGATAGCTCTAAAACACTTTTTGCCTATCACTCTCCCTATACTCT TCGGTCCGACCCCCCCTCCCCCCCACTCCTTCTCAGGTACCTTCTTTTTA TGAGGCACGTCCAGCGTATCGAGGTGTACACGTTCAAGACCGGGGACCCA GCCCCCGTCCTGTGGTACGATGTGGGGGTGACCAAGCGGGAACCCCGATC CGGTTGGCTCACGGTACCCTACTTCGTGTCCGGCCACCCGCGGCGCCCCA TCTCCAAGGAGGCGTTCTACAACAAGCTCGCCCAGACGCCGGACTCCGCC CTGCCCAAGGTCGACCAGCTTGTGACCATCACTTTCCGCCAGGAGGCCGA GCGGGTGAAACGGGTCGCTGCCTTGGGGACCCCCGCGGCGACGCTCCTAA ACTCTGTTGCTTCTCCCGCAACTGCGTCTTCCTCTACCCCTACCTGGGGG AGGGGAACGGAGAAAGGAGATGACAAAGGCGTTGAAGTTGGGGGAGGCAG CGAGTCGGAGAGCGAGCTGGTGGAGGTAGGGGATGTAGGCGCGGAGGGGG GGAGTAGCAGGCGGGCGGCGGCGGCCGCTAGCGACGAGAGCAGGAAGGCA ACGTCAATCGTGGACGTGTTTCTGGTGTGCGCGGCTATCGGAGGGGGACA GGCAAAGGCGATGGCCTGCCACCCGGAGGGCCGGGCGATGAAGTTCATTC CTTGGGGAGGGGTAAGCGTGCGCGATCATTTAAGCACGCACAGATACGCT CAATCAGACATCAGCGCGATATGTCTAGTTTTAGGGGAGTTTGCGTTACC GACGAGAAACCAAATTGATGCGTAGGGATATAAGGTGACGATGATTATCT CGTGAGTGGGGGTTAGCGGGCGCAAGCACGCGTCAGTGTCGGCGTTAAAT ATAATAAGTTGATATGGAGTGAAGCTGGTAAGCTAACGTAAAGCGTTGCT GGCGTCAGTATTGCATTCCCTTCCCCTCCTCTGTTCTAGGTACAACCCGC ACGTACTACGGTATGATTTTTATTGTTTTGTCAGTGAAGATTGCGAACCG TGTTGTCGCGTTACCGGTATCTCTTAATTTTTATCAAGGTCATAATAGAC TCGCGTATGCGTGTGCGCGCGGCTACTTGCTTTGCCTATCCTCTAGACTC TTTTGGTCTGCGAAACGAAACACACACACACATACATACGAGAGGACCAA TGCGAGAAGTATACAATGACAAGCATGACAGGGTCGGAATGCGCGGTTAT GTGCAATTTAATAAATTCACACTCAAAAACGTACACCCTTCCATACATAC ACACACACACACACAAAATCTTGCTATCAACAGGTGGCCGCACACGTCAG CCGTAACTCTCAGCCTCCCTCGGCGTTTGAGGGCCATGCGTTTTGCTTCC TTCCGCTGCCAGTGACCACGCTCCTCCCCGTTCACGTGAACGGTTTCTTC GAGCTCTCCACGAACAGGCGA
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Coding sequence (CDS) from alignment at H-elongata_contig7567:6840..9810-

>mRNA_H-elongata_contig7567.15256.1 ID=mRNA_H-elongata_contig7567.15256.1|Name=mRNA_H-elongata_contig7567.15256.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=504bp|location=Sequence derived from alignment at H-elongata_contig7567:6840..9810- (Himanthalia elongata Himel1 dioecious)
CTTGCACGCCTTGCTCAGGCGTCGAAGCTCGACAGGCTTTCCGCCACCGG
TCGCTTTGGCCTCGGCTTTAACTCTGTCTATCATTTTACCGACGTCCCAA
GCTTCGTCTCGGGGGAACACTTGGTGATATTCGACCCTCACACCAAGTAC
GTTCCGGGAGCCACGTCTGTACAGCCCGGGATCAAGCTTGCACGCCTTGC
TCAGGCGTCGAAGCTCGACAGGCTTTCCGCCACCGGTCGCTTTGGCCTCG
GCTTTAACTCTGTCTATCATTTTACCGACGTCCCAAGCTTCGTCTCGGGG
GAACACTTGGTGATATTCGACCCTCACACCAAGTACGTTCCGGGAGCCAC
GTCTGTACAGCCCGGGATCAAGATACGGTTCGCGGAGACGGACCTTCTGG
AGCAATTTCCAGATCAGGCACGCGCACCACACTATTAAATACGGTTCGCG
GAGACGGACCTTCTGGAGCAATTTCCAGATCAGGCACGCGCACCACACTA
TTAA
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