mRNA_H-elongata_contig74814.15161.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig74814.15161.1 vs. uniprot
Match: D7G5K3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G5K3_ECTSI) HSP 1 Score: 211 bits (538), Expect = 6.160e-69 Identity = 102/118 (86.44%), Postives = 110/118 (93.22%), Query Frame = 1
Query: 1 MRLLTHNVLRSPMKGVENGYPLRIEATDVQMLESEVKEEFLKQIAATLDWEALCKAASEVGLPKGSLPPALTPELLEDLSFIEALHRVLMDMHVVEGALICPETGRRFPITEGVPNLM 354
MRLLTHNVLRSPMKGV GYPLRIEATDVQM+ESEVKEEF+K +A TLDW ALCKAA+EVG+P+GSLPPALTPELLED SF+EALHRVLMDMHVVEG L+CPETGRRFPI EGVPNLM
Sbjct: 1 MRLLTHNVLRSPMKGVVEGYPLRIEATDVQMVESEVKEEFVKHMATTLDWGALCKAAAEVGMPEGSLPPALTPELLEDSSFLEALHRVLMDMHVVEGTLVCPETGRRFPIAEGVPNLM 118
BLAST of mRNA_H-elongata_contig74814.15161.1 vs. uniprot
Match: A0A836CHT2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHT2_9STRA) HSP 1 Score: 152 bits (383), Expect = 2.900e-45 Identity = 73/118 (61.86%), Postives = 93/118 (78.81%), Query Frame = 1
Query: 1 MRLLTHNVLRSPMKGVENGYPLRIEATDVQMLESEVKEEFLKQIAATLDWEALCKAASEVGLPKGSLPPALTPELLEDLSFIEALHRVLMDMHVVEGALICPETGRRFPITEGVPNLM 354
MRLLTHNVLR +KGVE GYPL IEA++VQM ES + +F+K IA TL+W AL +A +VGLP+ LP A++ LL D +F+ ALHRVLMD+HVV GAL+CPE+GRRFPI G+P++M
Sbjct: 1 MRLLTHNVLRCAIKGVEEGYPLSIEASEVQMEESPFRPDFVKHIAPTLNWPALRQAVKQVGLPEDMLPEAVSDALLGDEAFLRALHRVLMDVHVVAGALVCPESGRRFPIAHGIPDMM 118
BLAST of mRNA_H-elongata_contig74814.15161.1 vs. uniprot
Match: A0A1Y1INK2_KLENI (Uncharacterized protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1INK2_KLENI) HSP 1 Score: 125 bits (313), Expect = 1.040e-34 Identity = 59/118 (50.00%), Postives = 84/118 (71.19%), Query Frame = 1
Query: 1 MRLLTHNVLRSPMKGVENGYPLRIEATDVQMLESEVKEEFLKQIAATLDWEALCKAASEVGLPKGSLPPALTPELLEDLSFIEALHRVLMDMHVVEGALICPETGRRFPITEGVPNLM 354
MRLLTHN+L +KGV GYPL+IEAT + E++ FL+ I LDW+AL +AA+ +GL + LP + P LED F+ H VL+++H+ EGAL+CPETGRRFP+++G+PN++
Sbjct: 1 MRLLTHNMLACNIKGVTKGYPLKIEATKTEEKETDFNAGFLRHIYPKLDWKALREAAASLGLEE--LPEQVEPSQLEDEDFLRRFHHVLLEIHLEEGALVCPETGRRFPVSKGIPNML 116
BLAST of mRNA_H-elongata_contig74814.15161.1 vs. uniprot
Match: A0A2P6VL84_9CHLO (Multifunctional methyltransferase subunit TRM112 At1g22270 n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VL84_9CHLO) HSP 1 Score: 124 bits (311), Expect = 2.090e-34 Identity = 55/118 (46.61%), Postives = 87/118 (73.73%), Query Frame = 1
Query: 1 MRLLTHNVLRSPMKGVENGYPLRIEATDVQMLESEVKEEFLKQIAATLDWEALCKAASEVGLPKGSLPPALTPELLEDLSFIEALHRVLMDMHVVEGALICPETGRRFPITEGVPNLM 354
M+LLTHN+L +KGV+NG+P +IEA V++ E++ + +FL+ I + W ALC+AA+ +G+ LP T E+LED +F++ H L+++H+ EGAL+CPETGR+FP++ G+PNL+
Sbjct: 1 MKLLTHNMLACHIKGVQNGFPFKIEAEKVEVQEADFEPDFLQHIFPRIQWAALCEAAAAMGVE--GLPAEATEEMLEDDAFMKKFHHALLEVHLQEGALVCPETGRKFPVSAGIPNLL 116
BLAST of mRNA_H-elongata_contig74814.15161.1 vs. uniprot
Match: A0A803QXK8_CANSA (Uncharacterized protein n=3 Tax=Cannabis sativa TaxID=3483 RepID=A0A803QXK8_CANSA) HSP 1 Score: 124 bits (310), Expect = 2.960e-34 Identity = 58/118 (49.15%), Postives = 82/118 (69.49%), Query Frame = 1
Query: 1 MRLLTHNVLRSPMKGVENGYPLRIEATDVQMLESEVKEEFLKQIAATLDWEALCKAASEVGLPKGSLPPALTPELLEDLSFIEALHRVLMDMHVVEGALICPETGRRFPITEGVPNLM 354
MRLLTHN+L S +KGV NG+PLRIE V E E+ +FLK + + +DW+AL +AA +G + LP + P +L+ F+ H L+ +H+ EGALICPETGRRFP+T+G+PN++
Sbjct: 1 MRLLTHNMLSSNIKGVTNGFPLRIEVVKVVEKEVELNPDFLKSMFSKIDWKALVEAARSIGYTE--LPNEVDPSMLDSDDFLRRFHHALLQLHLEEGALICPETGRRFPVTKGIPNML 116
BLAST of mRNA_H-elongata_contig74814.15161.1 vs. uniprot
Match: A0A2R5GJB0_9STRA (Multifunctional methyltransferase subunit TRM112-like protein n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GJB0_9STRA) HSP 1 Score: 123 bits (309), Expect = 4.210e-34 Identity = 59/118 (50.00%), Postives = 85/118 (72.03%), Query Frame = 1
Query: 1 MRLLTHNVLRSPMKGVENGYPLRIEATDVQMLESEVKEEFLKQIAATLDWEALCKAASEVGLPKGSLPPALTPELLEDLSFIEALHRVLMDMHVVEGALICPETGRRFPITEGVPNLM 354
M+LLTHN+L+ +KGV NGYPL+IE T ++ E+E+ FL+ I L+W AA+++G + LP A+TPELLE F++ HR L+++ VVEGALICPE+GR+F IT G+PN++
Sbjct: 1 MKLLTHNMLKCNVKGVNNGYPLKIEVTTKEIRETEMNPAFLQGIVEKLEWPVFRAAAAQLG--EEGLPEAVTPELLEQEDFLKKFHRALLEVVVVEGALICPESGRKFTITNGIPNML 116
BLAST of mRNA_H-elongata_contig74814.15161.1 vs. uniprot
Match: A9S9D3_PHYPA (Predicted protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9S9D3_PHYPA) HSP 1 Score: 122 bits (306), Expect = 1.200e-33 Identity = 58/118 (49.15%), Postives = 83/118 (70.34%), Query Frame = 1
Query: 1 MRLLTHNVLRSPMKGVENGYPLRIEATDVQMLESEVKEEFLKQIAATLDWEALCKAASEVGLPKGSLPPALTPELLEDLSFIEALHRVLMDMHVVEGALICPETGRRFPITEGVPNLM 354
MRLLTHN+L +KGV G+PL IE T ++ ESE+ +FL+ I LDW+A +AA VG+ ++P + P +L+D F+ H L+++H+ EGALICPETGRRFP+T+GVPN++
Sbjct: 1 MRLLTHNMLACNIKGVTKGFPLGIEHTRLETKESELNADFLRHIFPKLDWKAFHEAAQSVGV--NNIPDQVEPVMLDDDEFLRKFHHALLEVHLEEGALICPETGRRFPVTKGVPNML 116
BLAST of mRNA_H-elongata_contig74814.15161.1 vs. uniprot
Match: A0A388LY57_CHABU (Uncharacterized protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388LY57_CHABU) HSP 1 Score: 122 bits (306), Expect = 1.200e-33 Identity = 57/118 (48.31%), Postives = 86/118 (72.88%), Query Frame = 1
Query: 1 MRLLTHNVLRSPMKGVENGYPLRIEATDVQMLESEVKEEFLKQIAATLDWEALCKAASEVGLPKGSLPPALTPELLEDLSFIEALHRVLMDMHVVEGALICPETGRRFPITEGVPNLM 354
MRLLTHN+L +KGV GYPL+IEA ++ E+E +FL++I LDW+AL + A + L + LP P +LED +F++ LH VL+++++ EGAL+CPETGRRFP+++G+PN++
Sbjct: 1 MRLLTHNMLTCNVKGVTKGYPLKIEAVRLEKKEAEFNPDFLRRIFPKLDWKALYETALSLDLDE--LPEQAEPSMLEDEAFLQKLHHVLLEVNLEEGALVCPETGRRFPVSKGIPNML 116
BLAST of mRNA_H-elongata_contig74814.15161.1 vs. uniprot
Match: W7TQC2_9STRA (TRM112-like protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TQC2_9STRA) HSP 1 Score: 124 bits (310), Expect = 1.350e-33 Identity = 57/118 (48.31%), Postives = 87/118 (73.73%), Query Frame = 1
Query: 1 MRLLTHNVLRSPMKGVENGYPLRIEATDVQMLESEVKEEFLKQIAATLDWEALCKAASEVGLPKGSLPPALTPELLEDLSFIEALHRVLMDMHVVEGALICPETGRRFPITEGVPNLM 354
MRL+THN+L+S +KGV NG+PLRIEA V++ E+E EF++ + +DW AL A+ E+G+ + LP + D SF++ +H++L+D+HV+EG+L+CPETGRRFPI G+PN++
Sbjct: 52 MRLITHNMLKSNVKGVINGFPLRIEAEKVEVKETEFNSEFVQNLLPKVDWPALRGASKELGMDE--LPEEMDEANKTDDSFLQLVHKLLLDVHVLEGSLVCPETGRRFPINNGIPNML 167
BLAST of mRNA_H-elongata_contig74814.15161.1 vs. uniprot
Match: A7RGF4_NEMVE (Multifunctional methyltransferase subunit TRM112-like protein n=1 Tax=Nematostella vectensis TaxID=45351 RepID=A7RGF4_NEMVE) HSP 1 Score: 122 bits (305), Expect = 1.760e-33 Identity = 58/118 (49.15%), Postives = 83/118 (70.34%), Query Frame = 1
Query: 1 MRLLTHNVLRSPMKGVENGYPLRIEATDVQMLESEVKEEFLKQIAATLDWEALCKAASEVGLPKGSLPPALTPELLEDLSFIEALHRVLMDMHVVEGALICPETGRRFPITEGVPNLM 354
MRLLTHN+L+S +KGV+NG+PL IEA DVQ+ E + EF+ ++ L+WEAL +AA ++G + LP L D F++ H VL+++ V EG LICPETGR+FP+T G+PN++
Sbjct: 1 MRLLTHNMLKSHVKGVKNGFPLAIEAQDVQVCEVDFNPEFISRMIPKLEWEALVQAAQQIGHGQ-DLPTQLAEGYESDNDFLKKAHHVLLEVEVQEGQLICPETGRKFPVTNGIPNML 117 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig74814.15161.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig74814.15161.1 >prot_H-elongata_contig74814.15161.1 ID=prot_H-elongata_contig74814.15161.1|Name=mRNA_H-elongata_contig74814.15161.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=119bp MRLLTHNVLRSPMKGVENGYPLRIEATDVQMLESEVKEEFLKQIAATLDWback to top mRNA from alignment at H-elongata_contig74814:93..1345+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig74814.15161.1 ID=mRNA_H-elongata_contig74814.15161.1|Name=mRNA_H-elongata_contig74814.15161.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1253bp|location=Sequence derived from alignment at H-elongata_contig74814:93..1345+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig74814:93..1345+ >mRNA_H-elongata_contig74814.15161.1 ID=mRNA_H-elongata_contig74814.15161.1|Name=mRNA_H-elongata_contig74814.15161.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=714bp|location=Sequence derived from alignment at H-elongata_contig74814:93..1345+ (Himanthalia elongata Himel1 dioecious)back to top |