mRNA_H-elongata_contig7401.15093.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig7401.15093.1 vs. uniprot
Match: D7G768_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G768_ECTSI) HSP 1 Score: 173 bits (438), Expect = 2.110e-50 Identity = 89/144 (61.81%), Postives = 110/144 (76.39%), Query Frame = 3
Query: 33 HRFSVASGALACLASVLGKVAFNGETAFHLLVKSSCQDHLAGWEPCNMVGLAVQGASLCGMFMVNALMLSMYLKALQSSGSTVATVTNCATNFLLSGVSGRIIFGEHLSLLWFCGASLVVSGVMLMVASTDDKTLEEARRVAGE 464
H +SVASGALAC ASVLGKVAF+G+T F + S+C++H CN VG VQGASL GMFMVNA+MLS +LKALQ SGSTVATVTN +TNF+LSG+SGR++FGE L LWF GASLVVSGV+L+ + + + + R+ GE
Sbjct: 16 HGYSVASGALACFASVLGKVAFDGDTPFQVQATSACEEHFPELALCNTVGRLVQGASLAGMFMVNAVMLSTFLKALQMSGSTVATVTNFSTNFVLSGISGRMVFGERLPALWFFGASLVVSGVVLLTGGSSPEGGKTSERIKGE 159
BLAST of mRNA_H-elongata_contig7401.15093.1 vs. uniprot
Match: A0A1Y1YT04_9FUNG (Uncharacterized protein n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1YT04_9FUNG) HSP 1 Score: 85.5 bits (210), Expect = 6.270e-17 Identity = 55/138 (39.86%), Postives = 78/138 (56.52%), Query Frame = 3
Query: 24 IGVHRFSVASGALACLASVLGKVAFNGETAF--HLLVKSSCQ------DHLAGWEPCNMVGLAVQGASLCGMFMVNALMLSMYLKALQSSGSTV-ATVTNCATNFLLSGVSGRIIFGEHLSLLWFCGASLVVSGVMLM 410
+ + +VA+G+ A LAS+ K+ + T L + CQ G E N+V L ++G L G+F+ NALM +M+ KAL SS S+V TV N TNF + G ++FGE LSL W+CGASL+ G +LM
Sbjct: 3 VSSNLLAVAAGSFAALASLFAKLTVDARTIVLAESLYRLGCQTFGLEVSEYLGQED-NLVYLIIRGLCLGGIFLCNALMWTMFTKALNSSKSSVQVTVLNSVTNFCTTAFCGHVVFGEPLSLKWWCGASLIAVGSILM 139
BLAST of mRNA_H-elongata_contig7401.15093.1 vs. uniprot
Match: UPI00142586A9 (transmembrane protein 42-like isoform X2 n=2 Tax=Anneissia japonica TaxID=1529436 RepID=UPI00142586A9) HSP 1 Score: 80.5 bits (197), Expect = 7.290e-15 Identity = 51/165 (30.91%), Postives = 86/165 (52.12%), Query Frame = 3
Query: 42 SVASGALACLASVLGKVAFNGETAFHLLVKSSC---------------QDHLAGWEP---CNMVGLAVQGASLCGMFMVNALMLSMYLKALQSSGSTV-ATVTNCATNFLLSGVSGRIIFGEHLSLLWFCGASLVVSGVMLMVASTDDKTLEEARRVAGESKRQK 479
S+ +G A L SV K+A N + + + QD G C + + +Q S G+F+ NA M ++++K+LQ S ++V ATVTN A+NF S + G ++FGE LS+ W+ G+ ++VSG++LM ++ ++ VAG ++ K
Sbjct: 7 SIGAGLCAALGSVCAKLALNSDILIQMCTTGATAVFAALPAFGSWLRLQDGSLGLRSKTTCETISIYLQVMSFAGIFIFNAFMWTLFVKSLQLSKASVQATVTNSASNFFFSALIGHLVFGEALSIRWWIGSMMIVSGLILMQRASAKTVSQKQEHVAGVERKDK 171
BLAST of mRNA_H-elongata_contig7401.15093.1 vs. uniprot
Match: UPI000C6E3DFD (transmembrane protein 42-like n=1 Tax=Centruroides sculpturatus TaxID=218467 RepID=UPI000C6E3DFD) HSP 1 Score: 79.7 bits (195), Expect = 9.960e-15 Identity = 52/131 (39.69%), Postives = 75/131 (57.25%), Query Frame = 3
Query: 42 SVASGALACLASVLGKVAFNGETAFHLLVKS----SCQDHL---AGWEPCNMVGLAVQGASLCGMFMVNALMLSMYLKALQSSGSTV-ATVTNCATNFLLSGVSGRIIFGEHLSLLWFCGASLVVSGVMLM 410
S+ SG LA LAS+ GK + E A +L S S +H+ A CN V L VQ M + NALM +++ KALQ +T+ ATVTN A NF + + G++ FGE L+ LW+ G +++ G++LM
Sbjct: 7 SLFSGLLAALASLFGKFSMASEEALYLCEVSMEFMSSDEHVHRKAYHNVCNNVLLLVQIGFFLLMLLSNALMWTLFTKALQLCATTLEATVTNTAANFFFTAIFGQVFFGETLTFLWWLGTMMIIVGLLLM 137
BLAST of mRNA_H-elongata_contig7401.15093.1 vs. uniprot
Match: A0A1V9YZD8_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YZD8_9STRA) HSP 1 Score: 79.0 bits (193), Expect = 1.280e-14 Identity = 41/136 (30.15%), Postives = 76/136 (55.88%), Query Frame = 3
Query: 42 SVASGALACLASVLGKVAFNGETAFHLLVKSSCQDHLAGWEPCNMVGLAVQGASLCGMFMVNALMLSMYLKALQSSGSTVATVTNCATNFLLSGVSGRIIFGEHLSLLWFCGASLVVSGVMLMVASTDDKTLEEAR 449
S SG +A ++ +LGK + +G T+ ++S C E C V V+ M + NALML+ +++ L + S AT+T+ A NF+++ + G ++FGEHL L W+ GA++++ G+ ++ +E+ +
Sbjct: 4 SAVSGVIAAVSGMLGKFSSDGSTSLMQYIESQCVG-----EHCGYVLAGVRIGFFVAMLLSNALMLNFFVQGLHETDSLTATITSSAANFVVTAILGLLVFGEHLPLQWWLGATVILVGMGCLLHGDKQPVVEKTK 134
BLAST of mRNA_H-elongata_contig7401.15093.1 vs. uniprot
Match: UPI000719CFA6 (transmembrane protein 42-like isoform X1 n=1 Tax=Priapulus caudatus TaxID=37621 RepID=UPI000719CFA6) HSP 1 Score: 79.0 bits (193), Expect = 1.410e-14 Identity = 51/144 (35.42%), Postives = 84/144 (58.33%), Query Frame = 3
Query: 39 FSVASGALACLASVLGKVAFNGETAFHL---LVKSSCQDHLAGWEPCNMVGLAVQGASLCGMFMVNALMLSMYLKALQSSGSTV-ATVTNCATNFLLSGVSGRIIFGEHLSLLWFCGASLVVSGVMLMVASTDDKTLEEARRVA 458
++V SG LA +AS GK+A A L +V + D C+ + L V+G+ +F++NA+M +++ KAL+ S +T+ AT+TN A+N + ++GR++FGE L WF GA L+V+GV L+ + D E R+ +
Sbjct: 7 YAVVSGMLAAMASASGKMAAASSDARWLCGAVVTPAALD-------CDSILLYVRGSCFLLVFLLNAVMWTVFTKALRLSPTTLSATITNLASNLFFTALTGRLLFGETLGATWFVGAGLIVTGVALIHNAAADAEREAQRKTS 143
BLAST of mRNA_H-elongata_contig7401.15093.1 vs. uniprot
Match: UPI00026599A2 (uncharacterized protein LOC100905534 n=1 Tax=Galendromus occidentalis TaxID=34638 RepID=UPI00026599A2) HSP 1 Score: 79.0 bits (193), Expect = 2.970e-14 Identity = 51/134 (38.06%), Postives = 73/134 (54.48%), Query Frame = 3
Query: 39 FSVASGALACLASVLGKVAFNGETAFHLLVKSSCQDHLAGWEP---------CNMVGLAVQGASLCGMFMVNALMLSMYLKALQSSGSTV-ATVTNCATNFLLSGVSGRIIFGEHLSLLWFCGASLVVSGVMLM 410
FS+ SG LA L+SVLGK+ + A + CQ L+ W C + V+G L M NALM +++ KAL+SS STV TV N A NF S + G+ FGE L+L+W G+ +++ G+ L+
Sbjct: 8 FSLLSGFLASLSSVLGKLGMASDRA-----AAMCQTVLSAWFETTQIEAFYLCESILSLVRGGFLLSMIACNALMWTIFTKALRSSSSTVEVTVVNLAANFFCSAIFGQSFFGERLTLVWALGSVIIIIGLALI 136
BLAST of mRNA_H-elongata_contig7401.15093.1 vs. uniprot
Match: UPI00193E357A (uncharacterized protein LOC111050264 n=1 Tax=Nilaparvata lugens TaxID=108931 RepID=UPI00193E357A) HSP 1 Score: 77.0 bits (188), Expect = 7.690e-14 Identity = 46/133 (34.59%), Postives = 78/133 (58.65%), Query Frame = 3
Query: 33 HRFSVASGALACLASVLGKVA--FNGETAFHLLVKSSCQDHLAGWEPCNMVGLAVQGASLCGMFMVNALMLSMYLKALQSSGSTVA-TVTNCATNFLLSGVSGRIIFGEHLSLLWFCGASLVVSGVMLMVAST 422
+RFS+ SG AC +S+ GK++ +++++L++ ++ + MF+ A + + Y+KALQ S +T+ T+ + ATN++LS + G +IFGE L++LWFCG LV SG+ML+ ST
Sbjct: 12 YRFSIISGICACSSSLFGKLSGKIPLDSSYYLVL--------------------IKAVFILLMFVSGAAVWTYYVKALQRSTTTIVPTLISTATNYILSAICGCLIFGEQLTILWFCGMVLVTSGLMLVTKST 124
BLAST of mRNA_H-elongata_contig7401.15093.1 vs. uniprot
Match: A0A433QZ90_9FUNG (Uncharacterized protein n=1 Tax=Jimgerdemannia flammicorona TaxID=994334 RepID=A0A433QZ90_9FUNG) HSP 1 Score: 76.6 bits (187), Expect = 1.350e-13 Identity = 54/146 (36.99%), Postives = 79/146 (54.11%), Query Frame = 3
Query: 39 FSVASGALACLASVLGKVAFNGETAFHLLVKSSCQDHLAGWEPC-----NMVGLAVQGASLCGMFMVNALMLSMYLKALQSSGSTV-ATVTNCATNFLLSGVSGRIIFGEHLSLLWFCGASLVVSGVMLMV-----ASTDDKTLEE 443
F++ SG A LASV K+ + T + S AG + C N++ L V+G +F NALM +++ KAL + S+V TV N A NF + + G ++FGE L+L W+ GASL+V+G +LM AS +KT E
Sbjct: 10 FALLSGLFASLASVFAKLFTDTRTDAAIQWICSASQLYAGLDLCANQGDNVLLLVVRGTCFALIFGCNALMWTLFTKALNKATSSVQVTVVNSAINFCATAILGNVVFGEPLALQWWGGASLIVTGTLLMTRAQSNASEQEKTKTE 155
BLAST of mRNA_H-elongata_contig7401.15093.1 vs. uniprot
Match: UPI001B88B7FF (transmembrane protein 42-like n=1 Tax=Gigantopelta aegis TaxID=1735272 RepID=UPI001B88B7FF) HSP 1 Score: 75.9 bits (185), Expect = 2.920e-13 Identity = 50/148 (33.78%), Postives = 82/148 (55.41%), Query Frame = 3
Query: 39 FSVASGALACLASVLGKVAFNGETAFHLLVKSSCQDHLA----------GWEPCNMVGLAVQGASLCGMFMVNALMLSMYLKALQSSGSTV-ATVTNCATNFLLSGVSGRIIFGEHLSLLWFCGASLVVSGVMLMVASTDDKTLEEAR 449
F+ +G +A LAS+ K+A + E + + CQ L G + V AV+ +C MF+ N LML+++ K+LQ S+V ATVTN A NF+++ V+ +FG+ L LLW+ GASL+++G++ + + E+ R
Sbjct: 11 FAALAGCMAALASISAKIATSYEDTSSICYR--CQRFLQSLLLWSIFEEGSPFMSTVITAVRVCGVCSMFLCNGLMLTLFSKSLQLCPSSVEATVTNTAANFIVTAVASLALFGDRLPLLWWLGASLILTGLVFIHRGGNRAQAEQTR 156 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig7401.15093.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig7401.15093.1 >prot_H-elongata_contig7401.15093.1 ID=prot_H-elongata_contig7401.15093.1|Name=mRNA_H-elongata_contig7401.15093.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=114bp MVGLAVQGASLCGMFMVNALMLSMYLKALQSSGSTVATVTNCATNFLLSGback to top mRNA from alignment at H-elongata_contig7401:6938..9180- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig7401.15093.1 ID=mRNA_H-elongata_contig7401.15093.1|Name=mRNA_H-elongata_contig7401.15093.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2243bp|location=Sequence derived from alignment at H-elongata_contig7401:6938..9180- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig7401:6938..9180- >mRNA_H-elongata_contig7401.15093.1 ID=mRNA_H-elongata_contig7401.15093.1|Name=mRNA_H-elongata_contig7401.15093.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=684bp|location=Sequence derived from alignment at H-elongata_contig7401:6938..9180- (Himanthalia elongata Himel1 dioecious)back to top |