prot_H-elongata_contig7401.15093.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig7401.15093.1
Unique Nameprot_H-elongata_contig7401.15093.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length114
Homology
BLAST of mRNA_H-elongata_contig7401.15093.1 vs. uniprot
Match: D7G768_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G768_ECTSI)

HSP 1 Score: 117 bits (293), Expect = 5.300e-31
Identity = 62/96 (64.58%), Postives = 76/96 (79.17%), Query Frame = 0
Query:    2 VGLAVQGASLCGMFMVNALMLSMYLKALQSSGSTVATVTNCATNFLLSGVSGRIIFGEHLSLLWFCGASLVVSGVMLMVASTDDKTLEEARRVAGE 97
            VG  VQGASL GMFMVNA+MLS +LKALQ SGSTVATVTN +TNF+LSG+SGR++FGE L  LWF GASLVVSGV+L+   +  +  + + R+ GE
Sbjct:   64 VGRLVQGASLAGMFMVNAVMLSTFLKALQMSGSTVATVTNFSTNFVLSGISGRMVFGERLPALWFFGASLVVSGVVLLTGGSSPEGGKTSERIKGE 159          
BLAST of mRNA_H-elongata_contig7401.15093.1 vs. uniprot
Match: A0A1Y1YT04_9FUNG (Uncharacterized protein n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1YT04_9FUNG)

HSP 1 Score: 72.4 bits (176), Expect = 9.610e-14
Identity = 40/80 (50.00%), Postives = 54/80 (67.50%), Query Frame = 0
Query:    1 MVGLAVQGASLCGMFMVNALMLSMYLKALQSSGSTV-ATVTNCATNFLLSGVSGRIIFGEHLSLLWFCGASLVVSGVMLM 79
            +V L ++G  L G+F+ NALM +M+ KAL SS S+V  TV N  TNF  +   G ++FGE LSL W+CGASL+  G +LM
Sbjct:   60 LVYLIIRGLCLGGIFLCNALMWTMFTKALNSSKSSVQVTVLNSVTNFCTTAFCGHVVFGEPLSLKWWCGASLIAVGSILM 139          
BLAST of mRNA_H-elongata_contig7401.15093.1 vs. uniprot
Match: UPI00142586A9 (transmembrane protein 42-like isoform X2 n=2 Tax=Anneissia japonica TaxID=1529436 RepID=UPI00142586A9)

HSP 1 Score: 71.2 bits (173), Expect = 4.020e-13
Identity = 38/102 (37.25%), Postives = 67/102 (65.69%), Query Frame = 0
Query:    2 VGLAVQGASLCGMFMVNALMLSMYLKALQSSGSTV-ATVTNCATNFLLSGVSGRIIFGEHLSLLWFCGASLVVSGVMLMVASTDDKTLEEARRVAGESKRQK 102
            + + +Q  S  G+F+ NA M ++++K+LQ S ++V ATVTN A+NF  S + G ++FGE LS+ W+ G+ ++VSG++LM  ++     ++   VAG  ++ K
Sbjct:   70 ISIYLQVMSFAGIFIFNAFMWTLFVKSLQLSKASVQATVTNSASNFFFSALIGHLVFGEALSIRWWIGSMMIVSGLILMQRASAKTVSQKQEHVAGVERKDK 171          
BLAST of mRNA_H-elongata_contig7401.15093.1 vs. uniprot
Match: UPI00083C57F3 (transmembrane protein 42 n=1 Tax=Nicrophorus vespilloides TaxID=110193 RepID=UPI00083C57F3)

HSP 1 Score: 69.7 bits (169), Expect = 5.760e-13
Identity = 36/73 (49.32%), Postives = 55/73 (75.34%), Query Frame = 0
Query:   14 MFMVNALMLSMYLKALQSSGSTV-ATVTNCATNFLLSGVSGRIIFGEHLSLLWFCGASLVVSGVMLMVASTDD 85
            M   NA + + Y+KALQ+S S++ ATVT+ ATN+LLS +SG +IFGE  SL+W+ GA LV+ G++L+V  +++
Sbjct:   43 MLACNAAVWTFYVKALQASNSSLSATVTSAATNYLLSAISGFLIFGEVTSLIWWAGAGLVLLGLILIVTESEE 115          
BLAST of mRNA_H-elongata_contig7401.15093.1 vs. uniprot
Match: UPI00193E357A (uncharacterized protein LOC111050264 n=1 Tax=Nilaparvata lugens TaxID=108931 RepID=UPI00193E357A)

HSP 1 Score: 68.9 bits (167), Expect = 1.820e-12
Identity = 35/71 (49.30%), Postives = 51/71 (71.83%), Query Frame = 0
Query:   14 MFMVNALMLSMYLKALQSSGSTVA-TVTNCATNFLLSGVSGRIIFGEHLSLLWFCGASLVVSGVMLMVAST 83
            MF+  A + + Y+KALQ S +T+  T+ + ATN++LS + G +IFGE L++LWFCG  LV SG+ML+  ST
Sbjct:   54 MFVSGAAVWTYYVKALQRSTTTIVPTLISTATNYILSAICGCLIFGEQLTILWFCGMVLVTSGLMLVTKST 124          
BLAST of mRNA_H-elongata_contig7401.15093.1 vs. uniprot
Match: UPI001B88B7FF (transmembrane protein 42-like n=1 Tax=Gigantopelta aegis TaxID=1735272 RepID=UPI001B88B7FF)

HSP 1 Score: 68.2 bits (165), Expect = 4.960e-12
Identity = 36/89 (40.45%), Postives = 59/89 (66.29%), Query Frame = 0
Query:    5 AVQGASLCGMFMVNALMLSMYLKALQSSGSTV-ATVTNCATNFLLSGVSGRIIFGEHLSLLWFCGASLVVSGVMLMVASTDDKTLEEAR 92
            AV+   +C MF+ N LML+++ K+LQ   S+V ATVTN A NF+++ V+   +FG+ L LLW+ GASL+++G++ +    +    E+ R
Sbjct:   68 AVRVCGVCSMFLCNGLMLTLFSKSLQLCPSSVEATVTNTAANFIVTAVASLALFGDRLPLLWWLGASLILTGLVFIHRGGNRAQAEQTR 156          
BLAST of mRNA_H-elongata_contig7401.15093.1 vs. uniprot
Match: UPI000719CFA6 (transmembrane protein 42-like isoform X1 n=1 Tax=Priapulus caudatus TaxID=37621 RepID=UPI000719CFA6)

HSP 1 Score: 66.6 bits (161), Expect = 1.370e-11
Identity = 36/93 (38.71%), Postives = 61/93 (65.59%), Query Frame = 0
Query:    4 LAVQGASLCGMFMVNALMLSMYLKALQSSGSTV-ATVTNCATNFLLSGVSGRIIFGEHLSLLWFCGASLVVSGVMLMVASTDDKTLEEARRVA 95
            L V+G+    +F++NA+M +++ KAL+ S +T+ AT+TN A+N   + ++GR++FGE L   WF GA L+V+GV L+  +  D   E  R+ +
Sbjct:   51 LYVRGSCFLLVFLLNAVMWTVFTKALRLSPTTLSATITNLASNLFFTALTGRLLFGETLGATWFVGAGLIVTGVALIHNAAADAEREAQRKTS 143          
BLAST of mRNA_H-elongata_contig7401.15093.1 vs. uniprot
Match: A0A5A7RIP2_STRAF (Cell growth defect factor 2 n=1 Tax=Striga asiatica TaxID=4170 RepID=A0A5A7RIP2_STRAF)

HSP 1 Score: 64.7 bits (156), Expect = 4.050e-11
Identity = 34/69 (49.28%), Postives = 46/69 (66.67%), Query Frame = 0
Query:   18 NALMLSMYLKALQSSGSTVATVTNCATNFLLSGVSGRIIFGEHLSLLWFCGASLVVSGVMLMVASTDDK 86
            N +M   Y+ +++S  S  ATVTN ATNFL SG+SG  +F E L L WF GA L+V GV+++  S+ DK
Sbjct:   42 NVIMWGCYVNSMRSLSSLQATVTNFATNFLSSGLSGFFLFEEALPLKWFAGAVLIVIGVIILSKSSIDK 110          
BLAST of mRNA_H-elongata_contig7401.15093.1 vs. uniprot
Match: A0A6P5AAA8_BRABE (transmembrane protein 42-like n=3 Tax=Branchiostoma TaxID=7737 RepID=A0A6P5AAA8_BRABE)

HSP 1 Score: 65.1 bits (157), Expect = 8.220e-11
Identity = 35/71 (49.30%), Postives = 49/71 (69.01%), Query Frame = 0
Query:   15 FMVNALMLSMYLKALQSSGSTV-ATVTNCATNFLLSGVSGRIIFGEHLSLLWFCGASLVVSGVMLMVASTD 84
            F++NA+M   + KAL +  S+V ATVTN A NF  SGV GR++F E LSLLW+ GAS +V G++ +   +D
Sbjct:   74 FVLNAVMWVFFTKALATCKSSVEATVTNTAANFFFSGVLGRVLFHEALSLLWYVGASCIVVGLLFIHRGSD 144          
BLAST of mRNA_H-elongata_contig7401.15093.1 vs. uniprot
Match: UPI00063FA3F6 (transmembrane protein 42 n=1 Tax=Monomorium pharaonis TaxID=307658 RepID=UPI00063FA3F6)

HSP 1 Score: 64.3 bits (155), Expect = 9.610e-11
Identity = 34/88 (38.64%), Postives = 60/88 (68.18%), Query Frame = 0
Query:    1 MVGLAVQGASLCGMFMVNALMLSMYLKALQSSGSTVA-TVTNCATNFLLSGVSGRIIFGEHLSLLWFCGASLVVSGVMLMVASTDDKT 87
            ++ L V+GA +  M + N +  + ++KAL +SGS++  T+T+ ATN++ S + G ++FGE +SL W+CG S+V+ G+ML+     +KT
Sbjct:   40 LLSLLVKGALIVFMIVCNTVGNTFFVKALHASGSSLPITITSAATNYVCSALVGFMVFGESVSLSWWCGTSMVLLGLMLICNVPAEKT 127          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig7401.15093.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G768_ECTSI5.300e-3164.58Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A1Y1YT04_9FUNG9.610e-1450.00Uncharacterized protein n=1 Tax=Basidiobolus meris... [more]
UPI00142586A94.020e-1337.25transmembrane protein 42-like isoform X2 n=2 Tax=A... [more]
UPI00083C57F35.760e-1349.32transmembrane protein 42 n=1 Tax=Nicrophorus vespi... [more]
UPI00193E357A1.820e-1249.30uncharacterized protein LOC111050264 n=1 Tax=Nilap... [more]
UPI001B88B7FF4.960e-1240.45transmembrane protein 42-like n=1 Tax=Gigantopelta... [more]
UPI000719CFA61.370e-1138.71transmembrane protein 42-like isoform X1 n=1 Tax=P... [more]
A0A5A7RIP2_STRAF4.050e-1149.28Cell growth defect factor 2 n=1 Tax=Striga asiatic... [more]
A0A6P5AAA8_BRABE8.220e-1149.30transmembrane protein 42-like n=3 Tax=Branchiostom... [more]
UPI00063FA3F69.610e-1138.64transmembrane protein 42 n=1 Tax=Monomorium pharao... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039632Transmembrane protein 42PANTHERPTHR31965FAMILY NOT NAMEDcoord: 5..90
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 27..37
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 63..83
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 84..113
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 58..62
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 38..57
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..26
NoneNo IPR availableSUPERFAMILY103481Multidrug resistance efflux transporter EmrEcoord: 11..82
NoneNo IPR availableTMHMMTMhelixcoord: 61..83
NoneNo IPR availableTMHMMTMhelixcoord: 35..57
NoneNo IPR availableTMHMMTMhelixcoord: 4..26

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig7401contigH-elongata_contig7401:7266..8212 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig7401.15093.1mRNA_H-elongata_contig7401.15093.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig7401 6938..9180 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig7401.15093.1 ID=prot_H-elongata_contig7401.15093.1|Name=mRNA_H-elongata_contig7401.15093.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=114bp
MVGLAVQGASLCGMFMVNALMLSMYLKALQSSGSTVATVTNCATNFLLSG
VSGRIIFGEHLSLLWFCGASLVVSGVMLMVASTDDKTLEEARRVAGESKR
QKEAASSTNIKQD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039632TMEM42