mRNA_H-elongata_contig73643.15052.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig73643.15052.1 vs. uniprot
Match: D7FSF0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSF0_ECTSI) HSP 1 Score: 103 bits (258), Expect = 3.200e-25 Identity = 52/62 (83.87%), Postives = 56/62 (90.32%), Query Frame = 1
Query: 1 ADKLDDIISEAEQVATDLYGESMSPQDRQQDRIWKDTTVSVFDLENMEEDGKLRGEEMPWAN 186
A +LDD+ISEAEQVAT+LYGES SPQD Q DR WKD TVSVFDLENMEEDGKLRGE+MPWAN
Sbjct: 258 AQQLDDMISEAEQVATELYGESQSPQDMQ-DRAWKDATVSVFDLENMEEDGKLRGEDMPWAN 318
BLAST of mRNA_H-elongata_contig73643.15052.1 vs. uniprot
Match: A0A836CLR4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLR4_9STRA) HSP 1 Score: 82.8 bits (203), Expect = 2.580e-17 Identity = 43/62 (69.35%), Postives = 50/62 (80.65%), Query Frame = 1
Query: 1 ADKLDDIISEAEQVATDLYGESMSPQDRQQDRIWKDTTVSVFDLENMEEDGKLRGEEMPWAN 186
ADK+D IIS AE+VAT LYGESMSP+D QQDR W++ SV+DLE +E D LRGEEMPWAN
Sbjct: 257 ADKVDVIISTAEKVATALYGESMSPKD-QQDRAWREHGASVWDLEKLENDAMLRGEEMPWAN 317
BLAST of mRNA_H-elongata_contig73643.15052.1 vs. uniprot
Match: A0A7S2HQV3_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HQV3_9STRA) HSP 1 Score: 70.1 bits (170), Expect = 1.470e-12 Identity = 29/59 (49.15%), Postives = 50/59 (84.75%), Query Frame = 1
Query: 4 DKLDDIISEAEQVATDLYGESMSPQDRQQDRIWKDTTVSVFDLENMEEDGKLRGEEMPW 180
+++ + ++EAEQV+T +YGESM+ ++ QQDR+WKD T+S++DLE +E+ +++GE+MPW
Sbjct: 457 ERVTECVAEAEQVSTSIYGESMTAEE-QQDRMWKDGTISIWDLETLEQQAEIQGEQMPW 514
BLAST of mRNA_H-elongata_contig73643.15052.1 vs. uniprot
Match: A0A7R9ZKR3_9STRA (Hypothetical protein n=2 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZKR3_9STRA) HSP 1 Score: 66.6 bits (161), Expect = 8.270e-12 Identity = 33/62 (53.23%), Postives = 44/62 (70.97%), Query Frame = 1
Query: 1 ADKLDDIISEAEQVATDLYGESMSPQDRQQDRIWKDTTVSVFDLENMEEDGKLRGEEMPWAN 186
A ++ I SEAE VAT +YG+ MS ++ QQDR+W+D T S+FDLE ME + + RGE PW N
Sbjct: 141 ASRIKQIASEAEVVATRIYGQGMSLRE-QQDRMWEDETTSIFDLEKMELEAEARGENAPWTN 201
BLAST of mRNA_H-elongata_contig73643.15052.1 vs. uniprot
Match: A0A7S2S3D9_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2S3D9_9STRA) HSP 1 Score: 67.4 bits (163), Expect = 1.310e-11 Identity = 32/60 (53.33%), Postives = 44/60 (73.33%), Query Frame = 1
Query: 7 KLDDIISEAEQVATDLYGESMSPQDRQQDRIWKDTTVSVFDLENMEEDGKLRGEEMPWAN 186
++ I +EAE VAT +YG+ MSP++ QQDR+WK+ T S+FDLE ME D + RG+ PW N
Sbjct: 475 RIKQIAAEAEVVATRIYGKGMSPKE-QQDRMWKEQTTSIFDLETMEIDAEKRGDAAPWTN 533
BLAST of mRNA_H-elongata_contig73643.15052.1 vs. uniprot
Match: A0A6U1M7L3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1M7L3_9STRA) HSP 1 Score: 66.6 bits (161), Expect = 2.400e-11 Identity = 33/62 (53.23%), Postives = 45/62 (72.58%), Query Frame = 1
Query: 1 ADKLDDIISEAEQVATDLYGESMSPQDRQQDRIWKDTTVSVFDLENMEEDGKLRGEEMPWAN 186
AD+L I EAE VAT +YGESM+ ++ QQD++W + T+SVFDLE +E + +GE MPW N
Sbjct: 341 ADRLRKITDEAEGVATSIYGESMTARE-QQDKMWNEGTISVFDLEKIENAAEAQGEAMPWKN 401
BLAST of mRNA_H-elongata_contig73643.15052.1 vs. uniprot
Match: A0A7S2VDW2_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2VDW2_9STRA) HSP 1 Score: 65.1 bits (157), Expect = 8.540e-11 Identity = 33/62 (53.23%), Postives = 44/62 (70.97%), Query Frame = 1
Query: 1 ADKLDDIISEAEQVATDLYGESMSPQDRQQDRIWKDTTVSVFDLENMEEDGKLRGEEMPWAN 186
A ++ + SEAE VAT +YG+ MS Q+ QQDR WK+ T S+FDLE ME + + GE+ PWAN
Sbjct: 437 ASRIKKLASEAEVVATRIYGKPMSLQE-QQDRAWKEQTTSIFDLERMEIEAERMGEQAPWAN 497
BLAST of mRNA_H-elongata_contig73643.15052.1 vs. uniprot
Match: A0A448Z1Y6_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z1Y6_9STRA) HSP 1 Score: 64.7 bits (156), Expect = 1.170e-10 Identity = 32/62 (51.61%), Postives = 45/62 (72.58%), Query Frame = 1
Query: 1 ADKLDDIISEAEQVATDLYGESMSPQDRQQDRIWKDTTVSVFDLENMEEDGKLRGEEMPWAN 186
A ++ I SEAE VAT +YG+ MS +D QQDR+WK+ T S+F+LE ME + + GE+ PWA+
Sbjct: 444 ASRIKQIASEAEVVATRIYGQGMSLRD-QQDRMWKEQTTSIFELEQMELEAEANGEKAPWAS 504
BLAST of mRNA_H-elongata_contig73643.15052.1 vs. uniprot
Match: B8BV68_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BV68_THAPS) HSP 1 Score: 63.9 bits (154), Expect = 2.180e-10 Identity = 31/56 (55.36%), Postives = 42/56 (75.00%), Query Frame = 1
Query: 19 IISEAEQVATDLYGESMSPQDRQQDRIWKDTTVSVFDLENMEEDGKLRGEEMPWAN 186
I SEAE VAT +YG+ M+ ++ QQDR+WK+ T S+FDLE +E + + RGE PWAN
Sbjct: 466 IASEAEVVATRIYGKGMTARE-QQDRMWKEQTTSIFDLETLEIEAERRGETAPWAN 520
BLAST of mRNA_H-elongata_contig73643.15052.1 vs. uniprot
Match: A0A7R9UEH5_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UEH5_9STRA) HSP 1 Score: 61.2 bits (147), Expect = 4.050e-10 Identity = 30/60 (50.00%), Postives = 45/60 (75.00%), Query Frame = 1
Query: 7 KLDDIISEAEQVATDLYGESMSPQDRQQDRIWKDTTVSVFDLENMEEDGKLRGEEMPWAN 186
++D I EAE+VAT +G+SM+P++ QQDR+ KD +VSV+DLE E+ + +GE+ PW N
Sbjct: 78 RIDAICDEAERVATSFFGQSMTPRE-QQDRMMKDGSVSVWDLEKYEDAAESQGEKQPWQN 136 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig73643.15052.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 20
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig73643.15052.1 >prot_H-elongata_contig73643.15052.1 ID=prot_H-elongata_contig73643.15052.1|Name=mRNA_H-elongata_contig73643.15052.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=44bp MASRCPLKIVSRIAFGRTRQCRCLTLRIWRKMESSEERRCRGLTback to top mRNA from alignment at H-elongata_contig73643:2229..2643- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig73643.15052.1 ID=mRNA_H-elongata_contig73643.15052.1|Name=mRNA_H-elongata_contig73643.15052.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=415bp|location=Sequence derived from alignment at H-elongata_contig73643:2229..2643- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig73643:2229..2643- >mRNA_H-elongata_contig73643.15052.1 ID=mRNA_H-elongata_contig73643.15052.1|Name=mRNA_H-elongata_contig73643.15052.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=264bp|location=Sequence derived from alignment at H-elongata_contig73643:2229..2643- (Himanthalia elongata Himel1 dioecious)back to top |