mRNA_H-elongata_contig73548.15045.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig73548.15045.1 vs. uniprot
Match: D8LDN4_ECTSI (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDN4_ECTSI) HSP 1 Score: 138 bits (348), Expect = 6.670e-37 Identity = 67/109 (61.47%), Postives = 79/109 (72.48%), Query Frame = 1
Query: 1 IAFFHSLGLVHADIKPENVVLYPRSGGNGCGGMRSSDLTNA---SQPPFDLRIIDLGNSVFAADAVPGVTAGTPSYLSPEANKGMPWGLPVDVWAAGCIIDEIVTGGRM 318
IAF HS+GLVHADIKP+NV LYP +Q PFDLR+IDLGN+VFA+D VPGVTAGTPSYLSPEA+ G+ WG PVDVWA GC++ EI+TGGR+
Sbjct: 256 IAFLHSVGLVHADIKPDNVALYPXXXXXXXXXXXXXXXXXXXXXAQAPFDLRLIDLGNAVFASDTVPGVTAGTPSYLSPEASGGLAWGPPVDVWAVGCVLHEILTGGRV 364
BLAST of mRNA_H-elongata_contig73548.15045.1 vs. uniprot
Match: A0A059LAU2_9CHLO (Protein kinase domain-containing protein (Fragment) n=1 Tax=Helicosporidium sp. ATCC 50920 TaxID=1291522 RepID=A0A059LAU2_9CHLO) HSP 1 Score: 82.0 bits (201), Expect = 1.330e-17 Identity = 44/111 (39.64%), Postives = 62/111 (55.86%), Query Frame = 1
Query: 1 IAFFHSLGLVHADIKPENVVLY---PRSGGNGCGGMRSSDLTNASQPPFDLRIIDLGNSVFAADAVPGVTAGTPSYLSPEANKGMPWGLPVDVWAAGCIIDEIVTGGRMKN 324
+ + H LGLVH D+KPENV+L P G GG R + L AS ++ +ID G++ + D T T Y SPE G+ W LP D+W+ GCI+ E++TG + N
Sbjct: 7 VRYVHGLGLVHTDLKPENVLLADCAPLQERGGGGGKRLASLLPASN---EVTLIDFGSAAWV-DGHHSATVSTRHYRSPEVVMGLGWSLPTDIWSVGCILVELLTGDVLFN 113
BLAST of mRNA_H-elongata_contig73548.15045.1 vs. uniprot
Match: A0A0P1L1A4_9SACH (LAQU0S07e03928g1_1 n=2 Tax=Lachancea TaxID=300275 RepID=A0A0P1L1A4_9SACH) HSP 1 Score: 73.9 bits (180), Expect = 4.020e-13 Identity = 42/120 (35.00%), Postives = 63/120 (52.50%), Query Frame = 1
Query: 1 IAFFHSLGLVHADIKPENVVLYPRS-----------------GGNGCGGMRSSDLTNASQPPFDLRIIDLGNSVFAADAVPGVTAGTPSYLSPEANKGMPWGLPVDVWAAGCIIDEIVTG 309
+ F H LG++H D+KPENV+L S + CGG R LTN ++++ID G++VF + P + + T Y +PE G+ W P DVW+ GC++ E+VTG
Sbjct: 401 VCFLHDLGIIHTDLKPENVLLCDESYVGKPLSPQTYSSLSPRRKSACGGERKF-LTNP-----EVKLIDFGSAVFHNEFHPAIIS-TRHYRAPEIVLGLGWSFPCDVWSIGCVLVELVTG 513
BLAST of mRNA_H-elongata_contig73548.15045.1 vs. uniprot
Match: LKH1_SCHPO (Dual specificity protein kinase lkh1 n=1 Tax=Schizosaccharomyces pombe (strain 972 / ATCC 24843) TaxID=284812 RepID=LKH1_SCHPO) HSP 1 Score: 72.4 bits (176), Expect = 1.400e-12 Identity = 43/106 (40.57%), Postives = 57/106 (53.77%), Query Frame = 1
Query: 1 IAFFHSLGLVHADIKPENVVLYPRSGGNGCGGMRSSDLTNASQPPF---DLRIIDLGNSVFAADAVPGVTAGTPSYLSPEANKGMPWGLPVDVWAAGCIIDEIVTG 309
+AF HSLGLVH D+KPENV+L N +R N SQ ++R+ID G++ F D T Y +PE G+ W P DVW+ GCI+ E+ TG
Sbjct: 476 VAFLHSLGLVHTDLKPENVLLVS----NASRTIRLP-YRNYSQKVLNSCEIRLIDFGSATFE-DEYHSSVVSTRHYRAPEIILGLGWSYPCDVWSIGCILVELFTG 575
BLAST of mRNA_H-elongata_contig73548.15045.1 vs. uniprot
Match: S9W8I5_SCHCR (CMGC/CLK protein kinase Lkh1 n=1 Tax=Schizosaccharomyces cryophilus (strain OY26 / ATCC MYA-4695 / CBS 11777 / NBRC 106824 / NRRL Y48691) TaxID=653667 RepID=S9W8I5_SCHCR) HSP 1 Score: 72.0 bits (175), Expect = 1.910e-12 Identity = 41/105 (39.05%), Postives = 57/105 (54.29%), Query Frame = 1
Query: 1 IAFFHSLGLVHADIKPENVVLYPRSGGNGCGGMR--SSDLTNASQPPFDLRIIDLGNSVFAADAVPGVTAGTPSYLSPEANKGMPWGLPVDVWAAGCIIDEIVTG 309
+AF H +GLVH D+KPENV+L + N R S L N ++ +R+ID G++ F D T Y +PE G+ W P D+W+ GCII E+ TG
Sbjct: 505 VAFLHEIGLVHTDLKPENVLLVSNASKNIRLPYRNYSQKLLNNTE----IRLIDFGSATFE-DEYHSSVVSTRHYRAPEIILGVGWSYPCDIWSLGCIIVELFTG 604
BLAST of mRNA_H-elongata_contig73548.15045.1 vs. uniprot
Match: A0A507EAV4_9FUNG (Protein kinase domain-containing protein n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A507EAV4_9FUNG) HSP 1 Score: 71.6 bits (174), Expect = 2.570e-12 Identity = 39/106 (36.79%), Postives = 54/106 (50.94%), Query Frame = 1
Query: 1 IAFFHSLGLVHADIKPENVVLYPRSGGNGCGGMRSSDLTNASQPPFDLRIIDLGNSVFAADAVPGVTAGTPSYLSPEANKGMPWGLPVDVWAAGCIIDEIVTGGRM 318
+AF H LGLVH D+KPEN++L GG R S +R+ID G+++F D V + T Y +PE W P D+W+ GCI+ E TG +
Sbjct: 385 VAFLHDLGLVHTDLKPENLMLVDNQT-RVVGGSRRSAKARKELLCTSIRLIDFGSAIFEEDYHSSVVS-TRHYRAPEIILCTGWSFPCDMWSVGCILVEFCTGDAL 488
BLAST of mRNA_H-elongata_contig73548.15045.1 vs. uniprot
Match: S9R892_SCHOY (CMGC/CLK protein kinase Lkh1 n=1 Tax=Schizosaccharomyces octosporus (strain yFS286) TaxID=483514 RepID=S9R892_SCHOY) HSP 1 Score: 71.6 bits (174), Expect = 2.600e-12 Identity = 40/105 (38.10%), Postives = 57/105 (54.29%), Query Frame = 1
Query: 1 IAFFHSLGLVHADIKPENVVLYPRSGGNGCGGMR--SSDLTNASQPPFDLRIIDLGNSVFAADAVPGVTAGTPSYLSPEANKGMPWGLPVDVWAAGCIIDEIVTG 309
+AF H +GLVH D+KPENV+L + N R S + N ++ +R+ID G++ F D T Y +PE G+ W P D+W+ GCII E+ TG
Sbjct: 489 VAFLHEIGLVHTDLKPENVLLVSNASKNVRLPYRNYSQKILNNTE----IRLIDFGSATFE-DEYHSSVVSTRHYRAPEIILGVGWSYPCDIWSLGCIIVELFTG 588
BLAST of mRNA_H-elongata_contig73548.15045.1 vs. uniprot
Match: F0W2J1_9STRA (Protein kinase putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W2J1_9STRA) HSP 1 Score: 70.9 bits (172), Expect = 4.820e-12 Identity = 50/128 (39.06%), Postives = 63/128 (49.22%), Query Frame = 1
Query: 7 FFHSLGLVHADIKPENVVLYPRSGGN------GCGGMRSSDLTNASQPPFDLRIIDL-------GNSVFAADA-----------VPGV-TAGTPSYLSPEANKGMPWGLPVDVWAAGCIIDEIVTGGR 315
F H LG+VH D+KPENV+L GN G G R L P D+RI DL G S+ DA VP GTP Y++PE + P+G PVD+W+ G II E++TG R
Sbjct: 460 FLHDLGVVHCDLKPENVLLTDAKPGNQETHEIGTGD-RLRHLEAELDPHADVRICDLQVELCDFGLSIKVPDARFFKLTGDVHKVPFTQVTGTPGYIAPELLQRQPYGKPVDMWSIGIIIYEMLTGYR 586
BLAST of mRNA_H-elongata_contig73548.15045.1 vs. uniprot
Match: A0A1G4MB41_LACFM (LAFE_0D03840g1_1 n=1 Tax=Lachancea fermentati TaxID=4955 RepID=A0A1G4MB41_LACFM) HSP 1 Score: 70.9 bits (172), Expect = 4.820e-12 Identity = 41/120 (34.17%), Postives = 62/120 (51.67%), Query Frame = 1
Query: 1 IAFFHSLGLVHADIKPENVVLYPRS-----------------GGNGCGGMRSSDLTNASQPPFDLRIIDLGNSVFAADAVPGVTAGTPSYLSPEANKGMPWGLPVDVWAAGCIIDEIVTG 309
+ F H LG++H D+KPENV+L S + GG R LTN ++++ID G++VF + P V + T Y +PE G+ W P D+W+ GC++ E+VTG
Sbjct: 354 VCFLHDLGIIHTDLKPENVLLCDESFVTKPLPQHQISAMSPRRKSASGGKRKL-LTNP-----EIKLIDFGSAVFHNEFHPAVIS-TRHYRAPEIVLGLGWSFPCDIWSIGCVLVELVTG 466
BLAST of mRNA_H-elongata_contig73548.15045.1 vs. uniprot
Match: A0A1G4JPM6_9SACH (LAME_0F00914g1_1 n=1 Tax=Lachancea meyersii CBS 8951 TaxID=1266667 RepID=A0A1G4JPM6_9SACH) HSP 1 Score: 70.9 bits (172), Expect = 4.850e-12 Identity = 42/121 (34.71%), Postives = 63/121 (52.07%), Query Frame = 1
Query: 1 IAFFHSLGLVHADIKPENVVLY------------------PRSGGNGCGGMRSSDLTNASQPPFDLRIIDLGNSVFAADAVPGVTAGTPSYLSPEANKGMPWGLPVDVWAAGCIIDEIVTG 309
+ F H LG++H D+KPENV+L PR + C G R LTN ++++ID G++VF + P V + T Y +PE G+ W P D+W+ GC++ E+VTG
Sbjct: 415 VCFLHDLGIIHTDLKPENVLLCDEFYVGKPLSQHQLSNLSPRRK-SACNGERKF-LTNP-----EVKLIDFGSAVFYNEFHPAVIS-TRHYRAPEIVLGLGWSFPCDIWSIGCVLVELVTG 527 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig73548.15045.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig73548.15045.1 >prot_H-elongata_contig73548.15045.1 ID=prot_H-elongata_contig73548.15045.1|Name=mRNA_H-elongata_contig73548.15045.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=108bp IAFFHSLGLVHADIKPENVVLYPRSGGNGCGGMRSSDLTNASQPPFDLRIback to top mRNA from alignment at H-elongata_contig73548:2034..2357+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig73548.15045.1 ID=mRNA_H-elongata_contig73548.15045.1|Name=mRNA_H-elongata_contig73548.15045.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=324bp|location=Sequence derived from alignment at H-elongata_contig73548:2034..2357+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig73548:2034..2357+ >mRNA_H-elongata_contig73548.15045.1 ID=mRNA_H-elongata_contig73548.15045.1|Name=mRNA_H-elongata_contig73548.15045.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=648bp|location=Sequence derived from alignment at H-elongata_contig73548:2034..2357+ (Himanthalia elongata Himel1 dioecious)back to top |