mRNA_H-elongata_contig7332.15019.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig7332.15019.1
Unique NamemRNA_H-elongata_contig7332.15019.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig7332.15019.1 vs. uniprot
Match: D7FNA6_ECTSI (Similar to titin isoform N2-B n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNA6_ECTSI)

HSP 1 Score: 530 bits (1366), Expect = 4.660e-168
Identity = 273/395 (69.11%), Postives = 314/395 (79.49%), Query Frame = 1
Query:    4 ADDSCQWFVTFTDSSGNLDQVHTT------------------------MAVASDTEGPAFSVSAGDDVIMVETLVNGTIDAIKLELELLSTVGEVNVHARENGTVEDTCIWDVVFETNTGQEEDGGTLPLISAAFFYVENSSYGDLSTSLVDGFNQVSIRRNRYGTSIRLGGDFALTLDGSRSRYLASNASARDVKLALEALNTVGTVDVERYDGDEEVYGGYTWLITFNTDLGDVNSLTTDIKSMTGTAPVFAVSENVQGVEPSFSSLDPYNSLPLGSATLTDLSDLSMIVSKLEEGLAYYFRVTASNYIGPGPPAVAGIPYVIPLPQPSDPPSNVTLEAVDGSTLKLGFDPPASTGGEKVDKFRVEYSESPFNDEVQALTVSCKSQSEVQLVT 1116
            A DSC WFVTFTD+ GN DQV                           MAV  DTEGPA SV+ GDD + V TL+NGT+D+IKLELELL  VGEV VHAREN T  +TC WD+VFETNTG E DGG LPLI+AAF+ + NSSY DL T++    +++ + RNR GTS+ LGGDFAL+LDGSRS+YL SNASARDVKLALEAL+TVGTVDVERYDGDEEVY GYTW++TFNTDLGDV+SLT D  SMTG+APV AVSE+V+GV PSF+SLDPYNSLPLGSATLTDLSDLSM V+ LEEG+AYYFRVTASNYIG GPPAVA  PY IPLPQPS PPSN+TLEAVDGSTL++ F PP+STGGE+VD +RVEYS SPF +E QALT+SC+S+ EVQ+VT
Sbjct:  563 AGDSCDWFVTFTDTPGNQDQVQRVVDGWEKMADKNVHVRVDTLSIPMLMAVVIDTEGPASSVTFGDDTVTVGTLINGTVDSIKLELELLPAVGEVTVHARENETTSETCTWDLVFETNTGLEGDGGELPLITAAFYNITNSSYSDLDTTVTQDMHEIVVSRNRSGTSVHLGGDFALSLDGSRSQYLPSNASARDVKLALEALDTVGTVDVERYDGDEEVYAGYTWIVTFNTDLGDVSSLTADTMSMTGSAPVLAVSESVKGVGPSFASLDPYNSLPLGSATLTDLSDLSMSVAGLEEGVAYYFRVTASNYIGSGPPAVAETPYAIPLPQPSQPPSNITLEAVDGSTLRVDFSPPSSTGGEEVDSYRVEYSTSPFFEEAQALTISCESEPEVQVVT 957          
BLAST of mRNA_H-elongata_contig7332.15019.1 vs. uniprot
Match: A0A6H5JXK7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXK7_9PHAE)

HSP 1 Score: 428 bits (1101), Expect = 1.660e-132
Identity = 235/382 (61.52%), Postives = 268/382 (70.16%), Query Frame = 1
Query:    4 ADDSCQWFVTFTDSSGNLDQVH-----------TTMAVASDTEGPAFSVSAGDDVIMVETLVNGTIDAIKLELELLSTVGEVNVHARENGTVEDTCIWDVVFETNTGQEEDGGTLPLISAAFFYVENSSYGDLSTSLVDGFNQVSIRRNRYGTSIRLGGDFALTLDGSRSRYLASNASARDVKLALEALNTVGTVDVERYDGDEEVYGGYTWLITFNTDLGDVNSLTTDIKSMTGTAPVFAVSENVQGVEPSFSSLDPYNSLPLGSATLTDLSDLSMIVSKLEEGLAYYFRVTASNYIGPGPPAVAGIPYVIPLPQPSDPPSNVTLEAVDGSTLKLGFDPPASTGGEKVDKFRVEYSESPFNDEVQALTVSCKSQSEVQLVT 1116
            A DSC WFVTFTD+ GN DQV              MAV  DTEGPA SV+ GDD + V TLVNGT+D+IKLELELL  VGE                                                            +++ + RNR GTS+ LGGDFAL+LDGSRS+YL SNASAR+VKLALEAL+TVGTVDVERYDGDEEVY GYTW++TFNTDLGDV+SLT D  SMTG+APV  VSE V+GV PSF+SLDPYNSLPLGSATLTDLSDLSM V+ LEEG+AYYFRVTASNYIG GPPAVA  PY IPLPQPS PPSN+T+EAVDGSTL++ F PP+STGGE+VD +RVEYS SPF +E QALTVSC+S+ EVQ+VT
Sbjct:  414 AGDSCDWFVTFTDTPGNQDQVEWVVDGWEKTADNKMAVVIDTEGPASSVTFGDDTVTVGTLVNGTVDSIKLELELLPAVGE----------------------------------------------------------DMHEIVVSRNRSGTSVHLGGDFALSLDGSRSQYLPSNASAREVKLALEALDTVGTVDVERYDGDEEVYAGYTWIVTFNTDLGDVSSLTADTMSMTGSAPVLTVSEGVKGVAPSFASLDPYNSLPLGSATLTDLSDLSMSVAGLEEGVAYYFRVTASNYIGSGPPAVAETPYAIPLPQPSQPPSNITVEAVDGSTLRVDFSPPSSTGGEEVDSYRVEYSTSPFFEEAQALTVSCESEPEVQVVT 737          
BLAST of mRNA_H-elongata_contig7332.15019.1 vs. uniprot
Match: A0A8K1FHK2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FHK2_PYTOL)

HSP 1 Score: 226 bits (576), Expect = 3.110e-62
Identity = 140/354 (39.55%), Postives = 199/354 (56.21%), Query Frame = 1
Query:   16 CQWFVTFTDSSGNLDQVHTTMAVASDTEGPAFSVSAGDDVIMVETLVNGTIDAIKLELELLSTVGEVNVHARENGT--VEDTCIWDVVFETNTGQEEDGGTLPLISAAFFYVENS-SYGDLSTSLVDGFNQVSIRRNRYGTSIRLGGDFALTLDGSRSRYLASNASARDVKLALEALNTVGTVDVERYDGDEEVYGGYTWLITFNTDLGDVNSLTTDIKSMTGTAPVFAVSENVQGVEPSFSSLDPYNSLPLGSATLTDLSDLSMIVSKLEEGLAYYFRVTASNYIGPGPPAVAGIPYVIPLPQPSDPPSNVTLEAVDGSTLKLGFDPPASTGGEKVDKFRVEYSESPFNDEVQ 1068
            C W VTFT   GN  Q+   +  A     P+ +++ GDD + + T+ +G+ID IK ELE L+ V  V V      T   + TC W V F+ N G       LPL++ +   V+N  +YG   T+   G + +++  NR GTS  LGG FAL   G R+ Y+  + +A  ++  LE L+T+G+V V R + D     GY W ++F  +LGD+ SL  D  ++TGTAP   V E  +GV P+F+S DP N L   S  +TDLSDLS     ++E + ++FRVTA N +G G  +++     IP  Q  DPP+NVTL AVDG+T+ +    P S GG  VD + VEY  +P  DEVQ
Sbjct:  575 CTWAVTFTSEPGN--QMQLKVVAAGSGAAPSNTMTIGDDTVTITTVQDGSIDIIKSELERLANVATVTVSGLPATTPNAQQTCTWSVTFDGNAGD------LPLMTVS---VDNGVTYGASKTT--GGGDTITVAANRDGTSTTLGGVFALEFMGQRTGYMPFDVTAAVLQNQLEVLSTIGSVSVTRSNADPNK--GYAWTVSFLNNLGDLPSLVPDFAALTGTAPFIRVQEVAKGVLPAFNSRDPANGLSFDSVLVTDLSDLSFTAKHVDENVPFFFRVTAINPVGRGESSISTPQSAIPTAQIPDPPTNVTLAAVDGTTIAVSLASPLSDGGLPVDAYMVEYGTTPIRDEVQ 913          
BLAST of mRNA_H-elongata_contig7332.15019.1 vs. uniprot
Match: A0A8J5MA48_9STRA (Uncharacterized protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5MA48_9STRA)

HSP 1 Score: 224 bits (571), Expect = 1.450e-61
Identity = 140/367 (38.15%), Postives = 207/367 (56.40%), Query Frame = 1
Query:   16 CQWFVTFTDSSGNLDQVHTTMAVASDTEGPAFSVSAGDDVIMVETLVNGTIDAIKLELELLSTVGEVNVHARENGTVEDTCIWDVVFETNTGQEEDGGTLPLISAAFFYVENSSYGDLSTSLVDGFNQVSIRRNRYGTSIRLGGDFALTLDGSRSRYLASNASARDVKLALEALNTVGTVDVERYDGDEEVYGGYTWLITFNTDLGDVNSLTTDIKSMTGTAPVFAVSENVQGVEPSFSSLDPYNSLPLGSATLTDLSDLSMIVSKLEEGLAYYFRVTASNYIGPGPPAVAGIPYVIPLPQPSDPPSNVTLEAVDGSTLKLGFDPPASTGGEKVDKFRVEYSESPFNDEVQALTVSCKSQSEVQLVT 1116
            C W VTFT+  GN+ Q+  T   AS     + +V+ GDD I + T+  GTI+ IK ELE L+ V +V V A      E TC W V F+ N G       LPL++ +     N+ +   +T  V G + +++     GTS+ LGG FAL  +G R+ Y+  +ASA  ++  LE L+T+G+V V+R   D     G++W ++F  +LGD+  L  D +++TGTAP   V+E  +GV P F+S D  N L   S  +TDLSDLS+    ++E + +YFRV+A N  G GP + +   Y IP  Q    P+NV+L AVDG+T+ +    P + GG  +D +RVEY  SP  DEVQ + +     +EV  ++
Sbjct:  567 CTWQVTFTNQPGNVFQL--TAIPASSAATASNTVTIGDDTITLSTVTEGTINIIKTELERLTNVAQVTVTATAGA--EQTCTWSVTFDGNAGN------LPLMTVS----TNNGFSYGATGTVSG-DTITVAAGTDGTSVVLGGVFALEFEGQRTGYMPFDASAAVMQTQLETLSTIGSVAVKRSSADPN--NGFSWTVSFLNNLGDLQPLQPDARALTGTAPRIDVTEATKGVLPPFNSKDRINGLSFDSVVVTDLSDLSVTAYHVDENVPFYFRVSAINAAGRGPSSYSTPQYGIPTAQVPSAPTNVSLSAVDGTTVAVRLSSPENDGGASLDSYRVEYGTSPIVDEVQQIRLVVPVTNEVHRIS 916          
BLAST of mRNA_H-elongata_contig7332.15019.1 vs. uniprot
Match: A0A329SB27_9STRA (Uncharacterized protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329SB27_9STRA)

HSP 1 Score: 223 bits (567), Expect = 4.920e-61
Identity = 137/353 (38.81%), Postives = 201/353 (56.94%), Query Frame = 1
Query:   16 CQWFVTFTDSSGNLDQVHTTMAVASDTEGPAFSVSAGDDVIMVETLVNGTIDAIKLELELLSTVGEVNVHARENGTVEDTCIWDVVFETNTGQEEDGGTLPLISAAFFYVENSSYGDLSTSLVDGFNQVSIRRNRYGTSIRLGGDFALTLDGSRSRYLASNASARDVKLALEALNTVGTVDVERYDGDEEVYGGYTWLITFNTDLGDVNSLTTDIKSMTGTAPVFAVSENVQGVEPSFSSLDPYNSLPLGSATLTDLSDLSMIVSKLEEGLAYYFRVTASNYIGPGPPAVAGIPYVIPLPQPSDPPSNVTLEAVDGSTLKLGFDPPASTGGEKVDKFRVEYSESPFNDEVQAL 1074
            C W VTFT+  GN+ Q+  T   AS     + +V+ GDD I + T+  GTI+ IK ELE L+ V +V V A      + TC W V F+ N G       LPL++ +     N+ +   +T  V G + +++     GTS+ LGG FAL  +G R+ Y+  +ASA  ++  LE L+T+G+V V+R   D     G+ W ++F  +LGD+  L +D +++TGTAP   V+E  +GV P F+S D  N L   S  +TDLSDLS+    ++E + +YFRV+A N  G GP + +   Y IP  Q    P+NV+L AVDG+T+ +    P + GG  +D +RVEY  SP  DEVQ +
Sbjct:  525 CTWQVTFTNQPGNVFQL--TAIPASSAATASNTVTIGDDTITLSTVTEGTINIIKTELERLTNVAQVTVTATAGA--KQTCTWSVTFDGNAGN------LPLMTVS----TNNGFSYGATGTVSG-DTITVAAGTDGTSVVLGGVFALEFEGQRTGYMPFDASAAVMQTQLETLSTIGSVAVKRSSADPN--NGFAWTVSFLNNLGDLQPLQSDARALTGTAPRIDVTEATKGVLPPFNSKDRINGLSFDSVVITDLSDLSVTAYHVDENVPFYFRVSAINAAGRGPSSYSTPQYGIPTAQVPSAPTNVSLSAVDGTTVAVRLSSPENDGGASLDSYRVEYGTSPIVDEVQQI 860          
BLAST of mRNA_H-elongata_contig7332.15019.1 vs. uniprot
Match: A0A0W8BWL6_PHYNI (Twitchin n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8BWL6_PHYNI)

HSP 1 Score: 221 bits (564), Expect = 1.050e-60
Identity = 142/354 (40.11%), Postives = 199/354 (56.21%), Query Frame = 1
Query:   16 CQWFVTFTDSSGNLDQVHTTMAVASDTEGPAFSVSAGDDVIMVETLVNGTIDAIKLELELLSTVGEVNVHARENGTVEDTCIWDVVFETNTGQEEDGGTLPLISAAFFYVENS-SYGDLSTSLVDGFNQVSIRRNRYGTSIRLGGDFALTLDGSRSRYLASNASARDVKLALEALNTVGTVDVERYDGDEEVYGGYTWLITFNTDLGDVNSLTTDIKSMTGTAPVFAVSENVQGVEPSFSSLDPYNSLPLGSATLTDLSDLSMIVSKLEEGLAYYFRVTASNYIGPGPPAVAGIPYVIPLPQPSDPPSNVTLEAVDGSTLKLGFDPPASTGGEKVDKFRVEYSESPFNDEVQAL 1074
            C W VTF +  GN+ Q+      AS     + +VS GDD I + T+ +GTI+ IK ELE L+ V +V V A      + TC W V F+ N G       LPL++ +     N  SYG  +T  V G + +++     GTS  LGG FAL  +G R+ Y+  +ASA  ++  LE L+T+G+V V R + D     GY W I+F  +LG++  L  D  ++TGTAP   V+E  +GV P F+S D  N L   S  +TDLSDLS+    ++E + +YFRV+A N  G GPP  +   Y IP  Q    P+NV+L AVDG+T+ +    P + GG  +D +RVEYS SP  DEVQ +
Sbjct:  567 CTWQVTFNNQPGNVVQLKA--IPASSAAAASATVSIGDDTIALSTVTDGTINIIKTELERLANVAQVTVTATAGA--KQTCTWSVTFDGNAGN------LPLMTVS---TNNGVSYG--ATGTVSG-DTITVAAGTDGTSAVLGGVFALEYEGQRTGYMPFDASAAVMQTQLETLSTIGSVAVSRSNADPN--NGYAWTISFLNNLGNLQPLQPDALALTGTAPKIDVTEATKGVLPPFNSKDRTNGLSFDSVVITDLSDLSVTAYHVDENVPFYFRVSAINTAGRGPPTYSTPQYAIPTAQVPSAPTNVSLSAVDGTTVAVRLSSPENDGGASLDSYRVEYSTSPIVDEVQQI 902          
BLAST of mRNA_H-elongata_contig7332.15019.1 vs. uniprot
Match: W2R3C1_PHYPN (Uncharacterized protein n=9 Tax=Phytophthora parasitica TaxID=4792 RepID=W2R3C1_PHYPN)

HSP 1 Score: 221 bits (564), Expect = 1.240e-60
Identity = 142/354 (40.11%), Postives = 199/354 (56.21%), Query Frame = 1
Query:   16 CQWFVTFTDSSGNLDQVHTTMAVASDTEGPAFSVSAGDDVIMVETLVNGTIDAIKLELELLSTVGEVNVHARENGTVEDTCIWDVVFETNTGQEEDGGTLPLISAAFFYVENS-SYGDLSTSLVDGFNQVSIRRNRYGTSIRLGGDFALTLDGSRSRYLASNASARDVKLALEALNTVGTVDVERYDGDEEVYGGYTWLITFNTDLGDVNSLTTDIKSMTGTAPVFAVSENVQGVEPSFSSLDPYNSLPLGSATLTDLSDLSMIVSKLEEGLAYYFRVTASNYIGPGPPAVAGIPYVIPLPQPSDPPSNVTLEAVDGSTLKLGFDPPASTGGEKVDKFRVEYSESPFNDEVQAL 1074
            C W VTF +  GN+ Q+      AS     + +VS GDD I + T+ +GTI+ IK ELE L+ V +V V A      + TC W V F+ N G       LPL++ +     N  SYG  +T  V G + +++     GTS  LGG FAL  +G R+ Y+  +ASA  ++  LE L+T+G+V V R + D     GY W I+F  +LG++  L  D  ++TGTAP   V+E  +GV P F+S D  N L   S  +TDLSDLS+    ++E + +YFRV+A N  G GPP  +   Y IP  Q    P+NV+L AVDG+T+ +    P + GG  +D +RVEYS SP  DEVQ +
Sbjct:  567 CTWQVTFNNQPGNVVQLKA--IPASSAAAASATVSIGDDTIALSTVTDGTINIIKTELERLANVAQVTVTATAGA--KQTCTWSVTFDGNAGN------LPLMTVS---TNNGVSYG--ATGTVSG-DTITVAAGTDGTSAVLGGVFALEYEGQRTGYMPFDASAAVMQTQLETLSTIGSVAVSRSNADPN--NGYAWTISFLNNLGNLQPLQPDALALTGTAPKIDVTEATKGVLPPFNSKDRTNGLSFDSVVITDLSDLSVTAYHVDENVPFYFRVSAINAAGRGPPTYSTPQYAIPTAQVPSAPTNVSLSAVDGTTVAVRLSSPENDGGASLDSYRVEYSTSPIVDEVQQI 902          
BLAST of mRNA_H-elongata_contig7332.15019.1 vs. uniprot
Match: A0A0P1A7V0_PLAHL (Projectin/twitchin and related proteins n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A7V0_PLAHL)

HSP 1 Score: 220 bits (561), Expect = 3.090e-60
Identity = 139/354 (39.27%), Postives = 205/354 (57.91%), Query Frame = 1
Query:   13 SCQWFVTFTDSSGNLDQVHTTMAVASDTEGPAFSVSAGDDVIMVETLVNGTIDAIKLELELLSTVGEVNVHARENGTVEDTCIWDVVFETNTGQEEDGGTLPLISAAFFYVENSSYGDLSTSLVDGFNQVSIRRNRYGTSIRLGGDFALTLDGSRSRYLASNASARDVKLALEALNTVGTVDVERYDGDEEVYGGYTWLITFNTDLGDVNSLTTDIKSMTGTAPVFAVSENVQGVEPSFSSLDPYNSLPLGSATLTDLSDLSMIVSKLEEGLAYYFRVTASNYIGPGPPAVAGIPYVIPLPQPSDPPSNVTLEAVDGSTLKLGFDPPASTGGEKVDKFRVEYSESPFNDEVQAL 1074
            +C W VTFT+  GN+ Q+    A++      + SV+ GDD I + T+++GTI+ IK ELE L+ V +V V A      + +C W V F+ N G       LPL++ +     N+     +   V G + ++I  +  GTS  LGG FAL  +G R+ Y+  +ASA  VK  LE L+++G VDV R + D     G+ W I+F T+LGD+ SL  D  ++TGTAP   V+E  +GV P F+S D  NS+   S  +TDLSDLS++   ++E + +Y RV+A N +G GP  ++   Y IP  Q    P+NV+L A+DGST+ + F  PA+ GG  +D +R+EY  S   DEVQ +
Sbjct:  563 ACTWQVTFTNQPGNVVQLKVIPALSGAVA--STSVTIGDDTITLSTIIDGTINVIKTELERLTNVAQVTVTATAGP--KQSCTWRVTFDGNAGN------LPLMTVS----TNNGVSFGAAGTVSG-DTITIAASIDGTSSVLGGVFALEYEGQRTGYMPFDASASVVKTQLEVLSSIGNVDVTRSNADPN--NGFAWTISFVTNLGDLPSLQPDALALTGTAPRIDVTEAKKGVLPPFNSKDRINSISFDSLVVTDLSDLSVVAYHVDENVPFYCRVSAINAVGLGPHTMSTPQYAIPTAQVPGAPTNVSLSALDGSTVAVSFSSPANDGGAPLDAYRIEYGTSQLVDEVQQI 899          
BLAST of mRNA_H-elongata_contig7332.15019.1 vs. uniprot
Match: A0A6A3P9D1_9STRA (Uncharacterized protein n=2 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3P9D1_9STRA)

HSP 1 Score: 220 bits (561), Expect = 3.100e-60
Identity = 142/352 (40.34%), Postives = 204/352 (57.95%), Query Frame = 1
Query:   13 SCQWFVTFTDSSGNLDQVHTTMAVASDTEGPAFSVSAGDDVIMVETLVNGTIDAIKLELELLSTVGEVNVHARENGTVEDTCIWDVVFETNTGQEEDGGTLPLISAAFFYVENSSYGDLSTSLVDGFNQVSIRRNRYGTSIRLGGDFALTLDGSRSRYLASNASARDVKLALEALNTVGTVDVERYDGDEEVYGGYTWLITFNTDLGDVNSLTTDIKSMTGTAPVFAVSENVQGVEPSFSSLDPYNSLPLGSATLTDLSDLSMIVSKLEEGLAYYFRVTASNYIGPGPPAVAGIPYVIPLPQPSDPPSNVTLEAVDGSTLKLGFDPPASTGGEKVDKFRVEYSESPFNDEVQ 1068
            +C W VTFT+  GN+ Q+      AS   GPA +V+ GDD I + T+ +GTI+ IK ELE L+ V +V V A  +GT + TC W V F+ N G       LPL+S +      +++G  ST+ V G + V++     GTS  LGG FAL  +G R+ Y+  +ASA  +K  LE L+T+G+V V R   D     GY W ++F  +LGD+ S   D  ++TGTAP   V+E  +GV P F+S D  N L   S  +TDLSDLS+    ++E + +YFRV+A N  G GP + +   + +P  Q    P+NV+L AVDG+++ +    P + GG  +D +RVEY  +P  DEVQ
Sbjct:  566 ACVWQVTFTNQPGNVVQMKA--IAASSGAGPATAVTIGDDTISLTTVTDGTINMIKTELERLTNVAQVTVTAT-SGTKQ-TCTWSVTFDGNAGN------LPLMSVSTD--SGATFG--STATVSG-DTVTVAALTDGTSAVLGGVFALEFEGQRTGYMPFDASAAVLKTQLETLSTIGSVAVTRSSADPNK--GYAWTVSFLDNLGDLPSFQPDALALTGTAPKIDVTEATKGVLPPFNSKDRVNGLSFDSLVVTDLSDLSVTAYHVDENVPFYFRVSAINAAGLGPSSFSTPQFGVPTAQVPSVPTNVSLTAVDGTSIAVSLSSPENDGGASLDSYRVEYGSNPIVDEVQ 900          
BLAST of mRNA_H-elongata_contig7332.15019.1 vs. uniprot
Match: A0A6A3UQQ2_9STRA (Uncharacterized protein n=6 Tax=Phytophthora TaxID=4783 RepID=A0A6A3UQQ2_9STRA)

HSP 1 Score: 220 bits (561), Expect = 3.100e-60
Identity = 142/352 (40.34%), Postives = 204/352 (57.95%), Query Frame = 1
Query:   13 SCQWFVTFTDSSGNLDQVHTTMAVASDTEGPAFSVSAGDDVIMVETLVNGTIDAIKLELELLSTVGEVNVHARENGTVEDTCIWDVVFETNTGQEEDGGTLPLISAAFFYVENSSYGDLSTSLVDGFNQVSIRRNRYGTSIRLGGDFALTLDGSRSRYLASNASARDVKLALEALNTVGTVDVERYDGDEEVYGGYTWLITFNTDLGDVNSLTTDIKSMTGTAPVFAVSENVQGVEPSFSSLDPYNSLPLGSATLTDLSDLSMIVSKLEEGLAYYFRVTASNYIGPGPPAVAGIPYVIPLPQPSDPPSNVTLEAVDGSTLKLGFDPPASTGGEKVDKFRVEYSESPFNDEVQ 1068
            +C W VTFT+  GN+ Q+      AS   GPA +V+ GDD I + T+ +GTI+ IK ELE L+ V +V V A  +GT + TC W V F+ N G       LPL+S +      +++G  ST+ V G + V++     GTS  LGG FAL  +G R+ Y+  +ASA  +K  LE L+T+G+V V R   D     GY W ++F  +LGD+ S   D  ++TGTAP   V+E  +GV P F+S D  N L   S  +TDLSDLS+    ++E + +YFRV+A N  G GP + +   + +P  Q    P+NV+L AVDG+++ +    P + GG  +D +RVEY  +P  DEVQ
Sbjct:  890 ACVWQVTFTNQPGNVVQMKA--IAASSGAGPATAVTTGDDTISLTTVTDGTINMIKTELERLTNVAQVTVTAT-SGTKQ-TCTWSVTFDGNAGN------LPLMSVSTD--SGATFG--STATVSG-DTVTVAALTDGTSTVLGGVFALEFEGQRTGYMPFDASAAVLKTQLETLSTIGSVAVTRSSADPNK--GYAWTVSFLDNLGDLPSFQPDALALTGTAPNIDVTEATKGVLPPFNSKDRVNGLSFDSLVVTDLSDLSVTAYHVDENVPFYFRVSAINAAGLGPSSFSTPQFGVPTAQVPSVPTNVSLTAVDGTSIAVSLSSPENDGGASLDSYRVEYGSNPIVDEVQ 1224          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig7332.15019.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FNA6_ECTSI4.660e-16869.11Similar to titin isoform N2-B n=1 Tax=Ectocarpus s... [more]
A0A6H5JXK7_9PHAE1.660e-13261.52Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A8K1FHK2_PYTOL3.110e-6239.55Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A8J5MA48_9STRA1.450e-6138.15Uncharacterized protein n=1 Tax=Phytophthora aleat... [more]
A0A329SB27_9STRA4.920e-6138.81Uncharacterized protein n=1 Tax=Phytophthora cacto... [more]
A0A0W8BWL6_PHYNI1.050e-6040.11Twitchin n=1 Tax=Phytophthora nicotianae TaxID=479... [more]
W2R3C1_PHYPN1.240e-6040.11Uncharacterized protein n=9 Tax=Phytophthora paras... [more]
A0A0P1A7V0_PLAHL3.090e-6039.27Projectin/twitchin and related proteins n=1 Tax=Pl... [more]
A0A6A3P9D1_9STRA3.100e-6040.34Uncharacterized protein n=2 Tax=Phytophthora rubi ... [more]
A0A6A3UQQ2_9STRA3.100e-6040.34Uncharacterized protein n=6 Tax=Phytophthora TaxID... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig7332contigH-elongata_contig7332:922..3515 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score539.3
Seed ortholog evalue1.4e-150
Seed eggNOG ortholog2880.D7FNA6
KEGG koko:K12567
KEGG Pathwayko05410,ko05414,map05410,map05414
EggNOG free text desc.cytoskeletal protein binding
EggNOG OGsKOG0613@1,KOG0613@2759
EC2.7.11.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01001,ko04131,ko04147,ko04812
Hectar predicted targeting categoryother localisation
Exons6
Model size1116
Cds size1116
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig7332.15019.1prot_H-elongata_contig7332.15019.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig7332 922..3515 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931136.257396-CDS-H-elongata_contig7332:921..11661622931136.257396-CDS-H-elongata_contig7332:921..1166Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7332 922..1166 -
1691679713.4130955-CDS-H-elongata_contig7332:921..11661691679713.4130955-CDS-H-elongata_contig7332:921..1166Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7332 922..1166 -
1622931136.322588-CDS-H-elongata_contig7332:1922..22081622931136.322588-CDS-H-elongata_contig7332:1922..2208Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7332 1923..2208 -
1691679713.4238472-CDS-H-elongata_contig7332:1922..22081691679713.4238472-CDS-H-elongata_contig7332:1922..2208Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7332 1923..2208 -
1622931136.3358777-CDS-H-elongata_contig7332:2400..25981622931136.3358777-CDS-H-elongata_contig7332:2400..2598Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7332 2401..2598 -
1691679713.4328797-CDS-H-elongata_contig7332:2400..25981691679713.4328797-CDS-H-elongata_contig7332:2400..2598Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7332 2401..2598 -
1622931136.3518677-CDS-H-elongata_contig7332:2796..29701622931136.3518677-CDS-H-elongata_contig7332:2796..2970Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7332 2797..2970 -
1691679713.4422772-CDS-H-elongata_contig7332:2796..29701691679713.4422772-CDS-H-elongata_contig7332:2796..2970Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7332 2797..2970 -
1622931136.364367-CDS-H-elongata_contig7332:3213..33511622931136.364367-CDS-H-elongata_contig7332:3213..3351Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7332 3214..3351 -
1691679713.4515052-CDS-H-elongata_contig7332:3213..33511691679713.4515052-CDS-H-elongata_contig7332:3213..3351Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7332 3214..3351 -
1622931136.3834562-CDS-H-elongata_contig7332:3440..35151622931136.3834562-CDS-H-elongata_contig7332:3440..3515Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7332 3441..3515 -
1691679713.4603179-CDS-H-elongata_contig7332:3440..35151691679713.4603179-CDS-H-elongata_contig7332:3440..3515Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7332 3441..3515 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig7332.15019.1

>prot_H-elongata_contig7332.15019.1 ID=prot_H-elongata_contig7332.15019.1|Name=mRNA_H-elongata_contig7332.15019.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=372bp
GADDSCQWFVTFTDSSGNLDQVHTTMAVASDTEGPAFSVSAGDDVIMVET
LVNGTIDAIKLELELLSTVGEVNVHARENGTVEDTCIWDVVFETNTGQEE
DGGTLPLISAAFFYVENSSYGDLSTSLVDGFNQVSIRRNRYGTSIRLGGD
FALTLDGSRSRYLASNASARDVKLALEALNTVGTVDVERYDGDEEVYGGY
TWLITFNTDLGDVNSLTTDIKSMTGTAPVFAVSENVQGVEPSFSSLDPYN
SLPLGSATLTDLSDLSMIVSKLEEGLAYYFRVTASNYIGPGPPAVAGIPY
VIPLPQPSDPPSNVTLEAVDGSTLKLGFDPPASTGGEKVDKFRVEYSESP
FNDEVQALTVSCKSQSEVQLVT
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mRNA from alignment at H-elongata_contig7332:922..3515-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig7332.15019.1 ID=mRNA_H-elongata_contig7332.15019.1|Name=mRNA_H-elongata_contig7332.15019.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2594bp|location=Sequence derived from alignment at H-elongata_contig7332:922..3515- (Himanthalia elongata Himel1 dioecious)
GGTGCGGATGATTCGTGCCAGTGGTTCGTCACTTTCACCGATAGTTCCGG CAATCTCGATCAGGTACATACCACGGTGGAATATTCGGGATTCCATAAGC GTCCCGAATTCCATGAAATGAGCGCAGTCACAGACCGCAAATGTATCATT TTAACAATTTTCAGATGGCCGTAGCTAGCGATACGGAGGGGCCAGCGTTC TCAGTATCGGCAGGCGACGACGTCATCATGGTGGAAACCTTGGTGAATGG GACAATAGACGCCATAAAGCTGGAGCTCGAACTACTGTCTACTGTCGGCG AGGTGGGTTCAACTGTAACTTGTGGAAAATATATCAGACTGTCAGTGACC GACATTATCCCTATGCAGCACCCTAGCGAACAAAATATTACGTTGATGCC AACAATAGGCTTTACATACATAACATTTTTCATCTACGATCGATTTCACT CCCTGTAGCCAAAACCTTTGTTATGAAGGGGCTCATCGCGTACGTGGTAC TGAAAGAAGATTTTTATAATAATCCATTGATTTCGTGTGCCAAAGGTGAA TGTCCATGCTCGAGAGAACGGGACGGTTGAAGATACTTGCATATGGGACG TGGTCTTTGAAACCAACACGGGACAAGAAGAGGATGGGGGGACACTTCCT CTCATCAGCGCTGCATTTTTTTATGTCGAAAATTCCAGCTACGGCGACCT CAGTACCAGCCTTGTCGACGTGAGAAACCAAAAATGCAGCCGATTTATTG GACCGCAGAATTGGTTGGCAATCAAGAACATACTGTATATTATGTTAAGG CAAACAATGTGCGTGTATGTGAATCGGTTGTGGTTGCTCATTTCTTGTGA CTAAAATCACGAGCACTGGACCTTGTTTACCCCTTTTACGTCTTCAATCT AAAATTAAACATCTTAGGGTTTTAACCAGGTATCGATTCGACGAAACCGC TATGGGACGAGTATCAGGTTGGGAGGAGATTTCGCTCTTACCTTGGATGG GTCGAGGTCACGATATCTCGCGAGCAATGCGTCGGCTAGAGATGTCAAGC TTGCCCTTGAGGCACTAAACACGGTTGGAACCGTGGATGTGGAGAGATAC GACGGAGATGAAGAGGTGAGTATCGTGTTTCGTTCTGTGACATGTTAGAT CATTTTCCGTAAAAGACACGGTCGGTGCGCCAACCGATATCACTGTACAA ATATTTCTTTGTATAGTTCGCCATCTTCTTCATGACTGGGGCCAATGAGA GCAAACTCAAGAGAAAACATCACCCAGACGTCGTCCGCGTTTCTTAATTC GTTACAGGTATACGGTGGCTACACTTGGTTAATAACCTTCAATACCGACC TTGGAGACGTGAACAGTCTAACCACCGACATCAAGTCCATGACAGGAACG GCTCCCGTCTTCGCGGTCTCTGAAAACGTACAAGGGGTAGAGCCTTCATT TTCTTCCCTAGACCCGTATAACTCATTGCCGCTGGGGTCTGCCACGTTGA CTGATCTGTCTGATCTGTCGATGATTGTATCAAAACTGGAGGAAGGGCTT GCCTACTACTTCAGGGTCACGGCCTCGAACTACATCGGTCCAGGTAAAAC CAGATAATTTTCTTGTTTCCACCTTTTTCAGCATTGCAACAATTTCCAAG TATGTTCAAGCTGCTATTAGGTATTCCACTACGAGGCGTTCGCTCCACGC CAGCGCGCCCAAGCTGACCTTTCCACTAAAGCCGATGGCCTCGGGCTGGC GTCGTCTGTGGACCGGAGACTACCCGTGATAGTGGGGAGTGCCTGCGAAG TCTTTCCAGCGGTTCTGGATGGTTTGTCTAGACTCCTGGGGGACAGTGTG CGCGCCAAGCTGCCGACCGCGCCATTCGTTCACGGGCTCCGGGACGGCTT TCGTGTCTGGTTGACGTGGGGGTCCTAGTGAATGACATGTCAACCGCTAT ACCGCTTGGAATCGCCGTGTAGGCTAGCCGGAGCTCTCCTTTGACTCCAA TATATAACATTTATCAAATTACTTTTCCTTTCTTCCGACAAAACCATTCA ACGTGCTATTGTACATTATTATCATTCCAATCTGGTACTGCTGTACCATT GTCTATTCCGTTCTAAGGGATCAAGGCATCTCTTCTCGGTTGATGTATAC GCTTTAAAATCGTGATTCAAGTTCAACACCCCTACACTTCTTCAACCAAT GGCTGAACTTTGTTTACTCTCGTTCTTATGTTTTTCATTATATTAAAACA AGAACCAATCCTCGTGAGATCAACTCACGATTTCCGCACTAAAAGGGCCA CGTTGCTTTCGACGAAACTATTCACTTTCTCGACCTGCTGATTTTGCAGG TCCTCCGGCAGTTGCGGGCATTCCTTATGTGATTCCGCTGCCTCAACCAA GCGACCCACCCTCGAACGTGACGCTGGAGGCAGTGGACGGCAGCACCCTA AAACTCGGCTTCGACCCCCCGGCCTCAACTGGGGGAGAAAAGGTGGACAA GTTTCGAGTGGAGTACTCGGAATCGCCGTTTAACGATGAAGTACAAGCAT TGACCGTTTCATGCAAATCGCAATCAGAGGTGCAGCTGGTGACC
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Coding sequence (CDS) from alignment at H-elongata_contig7332:922..3515-

>mRNA_H-elongata_contig7332.15019.1 ID=mRNA_H-elongata_contig7332.15019.1|Name=mRNA_H-elongata_contig7332.15019.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2232bp|location=Sequence derived from alignment at H-elongata_contig7332:922..3515- (Himanthalia elongata Himel1 dioecious)
GGTGCGGATGATTCGTGCCAGTGGTTCGTCACTTTCACCGATAGTTCCGG
CAATCTCGATCAGGTACATACCACGGGTGCGGATGATTCGTGCCAGTGGT
TCGTCACTTTCACCGATAGTTCCGGCAATCTCGATCAGGTACATACCACG
ATGGCCGTAGCTAGCGATACGGAGGGGCCAGCGTTCTCAGTATCGGCAGG
CGACGACGTCATCATGGTGGAAACCTTGGTGAATGGGACAATAGACGCCA
TAAAGCTGGAGCTCGAACTACTGTCTACTGTCGGCGAGATGGCCGTAGCT
AGCGATACGGAGGGGCCAGCGTTCTCAGTATCGGCAGGCGACGACGTCAT
CATGGTGGAAACCTTGGTGAATGGGACAATAGACGCCATAAAGCTGGAGC
TCGAACTACTGTCTACTGTCGGCGAGGTGAATGTCCATGCTCGAGAGAAC
GGGACGGTTGAAGATACTTGCATATGGGACGTGGTCTTTGAAACCAACAC
GGGACAAGAAGAGGATGGGGGGACACTTCCTCTCATCAGCGCTGCATTTT
TTTATGTCGAAAATTCCAGCTACGGCGACCTCAGTACCAGCCTTGTCGAC
GTGAATGTCCATGCTCGAGAGAACGGGACGGTTGAAGATACTTGCATATG
GGACGTGGTCTTTGAAACCAACACGGGACAAGAAGAGGATGGGGGGACAC
TTCCTCTCATCAGCGCTGCATTTTTTTATGTCGAAAATTCCAGCTACGGC
GACCTCAGTACCAGCCTTGTCGACGGTTTTAACCAGGTATCGATTCGACG
AAACCGCTATGGGACGAGTATCAGGTTGGGAGGAGATTTCGCTCTTACCT
TGGATGGGTCGAGGTCACGATATCTCGCGAGCAATGCGTCGGCTAGAGAT
GTCAAGCTTGCCCTTGAGGCACTAAACACGGTTGGAACCGTGGATGTGGA
GAGATACGACGGAGATGAAGAGGGTTTTAACCAGGTATCGATTCGACGAA
ACCGCTATGGGACGAGTATCAGGTTGGGAGGAGATTTCGCTCTTACCTTG
GATGGGTCGAGGTCACGATATCTCGCGAGCAATGCGTCGGCTAGAGATGT
CAAGCTTGCCCTTGAGGCACTAAACACGGTTGGAACCGTGGATGTGGAGA
GATACGACGGAGATGAAGAGGTATACGGTGGCTACACTTGGTTAATAACC
TTCAATACCGACCTTGGAGACGTGAACAGTCTAACCACCGACATCAAGTC
CATGACAGGAACGGCTCCCGTCTTCGCGGTCTCTGAAAACGTACAAGGGG
TAGAGCCTTCATTTTCTTCCCTAGACCCGTATAACTCATTGCCGCTGGGG
TCTGCCACGTTGACTGATCTGTCTGATCTGTCGATGATTGTATCAAAACT
GGAGGAAGGGCTTGCCTACTACTTCAGGGTCACGGCCTCGAACTACATCG
GTCCAGGTATACGGTGGCTACACTTGGTTAATAACCTTCAATACCGACCT
TGGAGACGTGAACAGTCTAACCACCGACATCAAGTCCATGACAGGAACGG
CTCCCGTCTTCGCGGTCTCTGAAAACGTACAAGGGGTAGAGCCTTCATTT
TCTTCCCTAGACCCGTATAACTCATTGCCGCTGGGGTCTGCCACGTTGAC
TGATCTGTCTGATCTGTCGATGATTGTATCAAAACTGGAGGAAGGGCTTG
CCTACTACTTCAGGGTCACGGCCTCGAACTACATCGGTCCAGGTCCTCCG
GCAGTTGCGGGCATTCCTTATGTGATTCCGCTGCCTCAACCAAGCGACCC
ACCCTCGAACGTGACGCTGGAGGCAGTGGACGGCAGCACCCTAAAACTCG
GCTTCGACCCCCCGGCCTCAACTGGGGGAGAAAAGGTGGACAAGTTTCGA
GTGGAGTACTCGGAATCGCCGTTTAACGATGAAGTACAAGCATTGACCGT
TTCATGCAAATCGCAATCAGAGGTGCAGCTGGTGACCGTCCTCCGGCAGT
TGCGGGCATTCCTTATGTGATTCCGCTGCCTCAACCAAGCGACCCACCCT
CGAACGTGACGCTGGAGGCAGTGGACGGCAGCACCCTAAAACTCGGCTTC
GACCCCCCGGCCTCAACTGGGGGAGAAAAGGTGGACAAGTTTCGAGTGGA
GTACTCGGAATCGCCGTTTAACGATGAAGTACAAGCATTGACCGTTTCAT
GCAAATCGCAATCAGAGGTGCAGCTGGTGACC
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