mRNA_H-elongata_contig7332.15019.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig7332.15019.1 vs. uniprot
Match: D7FNA6_ECTSI (Similar to titin isoform N2-B n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNA6_ECTSI) HSP 1 Score: 530 bits (1366), Expect = 4.660e-168 Identity = 273/395 (69.11%), Postives = 314/395 (79.49%), Query Frame = 1
Query: 4 ADDSCQWFVTFTDSSGNLDQVHTT------------------------MAVASDTEGPAFSVSAGDDVIMVETLVNGTIDAIKLELELLSTVGEVNVHARENGTVEDTCIWDVVFETNTGQEEDGGTLPLISAAFFYVENSSYGDLSTSLVDGFNQVSIRRNRYGTSIRLGGDFALTLDGSRSRYLASNASARDVKLALEALNTVGTVDVERYDGDEEVYGGYTWLITFNTDLGDVNSLTTDIKSMTGTAPVFAVSENVQGVEPSFSSLDPYNSLPLGSATLTDLSDLSMIVSKLEEGLAYYFRVTASNYIGPGPPAVAGIPYVIPLPQPSDPPSNVTLEAVDGSTLKLGFDPPASTGGEKVDKFRVEYSESPFNDEVQALTVSCKSQSEVQLVT 1116
A DSC WFVTFTD+ GN DQV MAV DTEGPA SV+ GDD + V TL+NGT+D+IKLELELL VGEV VHAREN T +TC WD+VFETNTG E DGG LPLI+AAF+ + NSSY DL T++ +++ + RNR GTS+ LGGDFAL+LDGSRS+YL SNASARDVKLALEAL+TVGTVDVERYDGDEEVY GYTW++TFNTDLGDV+SLT D SMTG+APV AVSE+V+GV PSF+SLDPYNSLPLGSATLTDLSDLSM V+ LEEG+AYYFRVTASNYIG GPPAVA PY IPLPQPS PPSN+TLEAVDGSTL++ F PP+STGGE+VD +RVEYS SPF +E QALT+SC+S+ EVQ+VT
Sbjct: 563 AGDSCDWFVTFTDTPGNQDQVQRVVDGWEKMADKNVHVRVDTLSIPMLMAVVIDTEGPASSVTFGDDTVTVGTLINGTVDSIKLELELLPAVGEVTVHARENETTSETCTWDLVFETNTGLEGDGGELPLITAAFYNITNSSYSDLDTTVTQDMHEIVVSRNRSGTSVHLGGDFALSLDGSRSQYLPSNASARDVKLALEALDTVGTVDVERYDGDEEVYAGYTWIVTFNTDLGDVSSLTADTMSMTGSAPVLAVSESVKGVGPSFASLDPYNSLPLGSATLTDLSDLSMSVAGLEEGVAYYFRVTASNYIGSGPPAVAETPYAIPLPQPSQPPSNITLEAVDGSTLRVDFSPPSSTGGEEVDSYRVEYSTSPFFEEAQALTISCESEPEVQVVT 957
BLAST of mRNA_H-elongata_contig7332.15019.1 vs. uniprot
Match: A0A6H5JXK7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXK7_9PHAE) HSP 1 Score: 428 bits (1101), Expect = 1.660e-132 Identity = 235/382 (61.52%), Postives = 268/382 (70.16%), Query Frame = 1
Query: 4 ADDSCQWFVTFTDSSGNLDQVH-----------TTMAVASDTEGPAFSVSAGDDVIMVETLVNGTIDAIKLELELLSTVGEVNVHARENGTVEDTCIWDVVFETNTGQEEDGGTLPLISAAFFYVENSSYGDLSTSLVDGFNQVSIRRNRYGTSIRLGGDFALTLDGSRSRYLASNASARDVKLALEALNTVGTVDVERYDGDEEVYGGYTWLITFNTDLGDVNSLTTDIKSMTGTAPVFAVSENVQGVEPSFSSLDPYNSLPLGSATLTDLSDLSMIVSKLEEGLAYYFRVTASNYIGPGPPAVAGIPYVIPLPQPSDPPSNVTLEAVDGSTLKLGFDPPASTGGEKVDKFRVEYSESPFNDEVQALTVSCKSQSEVQLVT 1116
A DSC WFVTFTD+ GN DQV MAV DTEGPA SV+ GDD + V TLVNGT+D+IKLELELL VGE +++ + RNR GTS+ LGGDFAL+LDGSRS+YL SNASAR+VKLALEAL+TVGTVDVERYDGDEEVY GYTW++TFNTDLGDV+SLT D SMTG+APV VSE V+GV PSF+SLDPYNSLPLGSATLTDLSDLSM V+ LEEG+AYYFRVTASNYIG GPPAVA PY IPLPQPS PPSN+T+EAVDGSTL++ F PP+STGGE+VD +RVEYS SPF +E QALTVSC+S+ EVQ+VT
Sbjct: 414 AGDSCDWFVTFTDTPGNQDQVEWVVDGWEKTADNKMAVVIDTEGPASSVTFGDDTVTVGTLVNGTVDSIKLELELLPAVGE----------------------------------------------------------DMHEIVVSRNRSGTSVHLGGDFALSLDGSRSQYLPSNASAREVKLALEALDTVGTVDVERYDGDEEVYAGYTWIVTFNTDLGDVSSLTADTMSMTGSAPVLTVSEGVKGVAPSFASLDPYNSLPLGSATLTDLSDLSMSVAGLEEGVAYYFRVTASNYIGSGPPAVAETPYAIPLPQPSQPPSNITVEAVDGSTLRVDFSPPSSTGGEEVDSYRVEYSTSPFFEEAQALTVSCESEPEVQVVT 737
BLAST of mRNA_H-elongata_contig7332.15019.1 vs. uniprot
Match: A0A8K1FHK2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FHK2_PYTOL) HSP 1 Score: 226 bits (576), Expect = 3.110e-62 Identity = 140/354 (39.55%), Postives = 199/354 (56.21%), Query Frame = 1
Query: 16 CQWFVTFTDSSGNLDQVHTTMAVASDTEGPAFSVSAGDDVIMVETLVNGTIDAIKLELELLSTVGEVNVHARENGT--VEDTCIWDVVFETNTGQEEDGGTLPLISAAFFYVENS-SYGDLSTSLVDGFNQVSIRRNRYGTSIRLGGDFALTLDGSRSRYLASNASARDVKLALEALNTVGTVDVERYDGDEEVYGGYTWLITFNTDLGDVNSLTTDIKSMTGTAPVFAVSENVQGVEPSFSSLDPYNSLPLGSATLTDLSDLSMIVSKLEEGLAYYFRVTASNYIGPGPPAVAGIPYVIPLPQPSDPPSNVTLEAVDGSTLKLGFDPPASTGGEKVDKFRVEYSESPFNDEVQ 1068
C W VTFT GN Q+ + A P+ +++ GDD + + T+ +G+ID IK ELE L+ V V V T + TC W V F+ N G LPL++ + V+N +YG T+ G + +++ NR GTS LGG FAL G R+ Y+ + +A ++ LE L+T+G+V V R + D GY W ++F +LGD+ SL D ++TGTAP V E +GV P+F+S DP N L S +TDLSDLS ++E + ++FRVTA N +G G +++ IP Q DPP+NVTL AVDG+T+ + P S GG VD + VEY +P DEVQ
Sbjct: 575 CTWAVTFTSEPGN--QMQLKVVAAGSGAAPSNTMTIGDDTVTITTVQDGSIDIIKSELERLANVATVTVSGLPATTPNAQQTCTWSVTFDGNAGD------LPLMTVS---VDNGVTYGASKTT--GGGDTITVAANRDGTSTTLGGVFALEFMGQRTGYMPFDVTAAVLQNQLEVLSTIGSVSVTRSNADPNK--GYAWTVSFLNNLGDLPSLVPDFAALTGTAPFIRVQEVAKGVLPAFNSRDPANGLSFDSVLVTDLSDLSFTAKHVDENVPFFFRVTAINPVGRGESSISTPQSAIPTAQIPDPPTNVTLAAVDGTTIAVSLASPLSDGGLPVDAYMVEYGTTPIRDEVQ 913
BLAST of mRNA_H-elongata_contig7332.15019.1 vs. uniprot
Match: A0A8J5MA48_9STRA (Uncharacterized protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5MA48_9STRA) HSP 1 Score: 224 bits (571), Expect = 1.450e-61 Identity = 140/367 (38.15%), Postives = 207/367 (56.40%), Query Frame = 1
Query: 16 CQWFVTFTDSSGNLDQVHTTMAVASDTEGPAFSVSAGDDVIMVETLVNGTIDAIKLELELLSTVGEVNVHARENGTVEDTCIWDVVFETNTGQEEDGGTLPLISAAFFYVENSSYGDLSTSLVDGFNQVSIRRNRYGTSIRLGGDFALTLDGSRSRYLASNASARDVKLALEALNTVGTVDVERYDGDEEVYGGYTWLITFNTDLGDVNSLTTDIKSMTGTAPVFAVSENVQGVEPSFSSLDPYNSLPLGSATLTDLSDLSMIVSKLEEGLAYYFRVTASNYIGPGPPAVAGIPYVIPLPQPSDPPSNVTLEAVDGSTLKLGFDPPASTGGEKVDKFRVEYSESPFNDEVQALTVSCKSQSEVQLVT 1116
C W VTFT+ GN+ Q+ T AS + +V+ GDD I + T+ GTI+ IK ELE L+ V +V V A E TC W V F+ N G LPL++ + N+ + +T V G + +++ GTS+ LGG FAL +G R+ Y+ +ASA ++ LE L+T+G+V V+R D G++W ++F +LGD+ L D +++TGTAP V+E +GV P F+S D N L S +TDLSDLS+ ++E + +YFRV+A N G GP + + Y IP Q P+NV+L AVDG+T+ + P + GG +D +RVEY SP DEVQ + + +EV ++
Sbjct: 567 CTWQVTFTNQPGNVFQL--TAIPASSAATASNTVTIGDDTITLSTVTEGTINIIKTELERLTNVAQVTVTATAGA--EQTCTWSVTFDGNAGN------LPLMTVS----TNNGFSYGATGTVSG-DTITVAAGTDGTSVVLGGVFALEFEGQRTGYMPFDASAAVMQTQLETLSTIGSVAVKRSSADPN--NGFSWTVSFLNNLGDLQPLQPDARALTGTAPRIDVTEATKGVLPPFNSKDRINGLSFDSVVVTDLSDLSVTAYHVDENVPFYFRVSAINAAGRGPSSYSTPQYGIPTAQVPSAPTNVSLSAVDGTTVAVRLSSPENDGGASLDSYRVEYGTSPIVDEVQQIRLVVPVTNEVHRIS 916
BLAST of mRNA_H-elongata_contig7332.15019.1 vs. uniprot
Match: A0A329SB27_9STRA (Uncharacterized protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329SB27_9STRA) HSP 1 Score: 223 bits (567), Expect = 4.920e-61 Identity = 137/353 (38.81%), Postives = 201/353 (56.94%), Query Frame = 1
Query: 16 CQWFVTFTDSSGNLDQVHTTMAVASDTEGPAFSVSAGDDVIMVETLVNGTIDAIKLELELLSTVGEVNVHARENGTVEDTCIWDVVFETNTGQEEDGGTLPLISAAFFYVENSSYGDLSTSLVDGFNQVSIRRNRYGTSIRLGGDFALTLDGSRSRYLASNASARDVKLALEALNTVGTVDVERYDGDEEVYGGYTWLITFNTDLGDVNSLTTDIKSMTGTAPVFAVSENVQGVEPSFSSLDPYNSLPLGSATLTDLSDLSMIVSKLEEGLAYYFRVTASNYIGPGPPAVAGIPYVIPLPQPSDPPSNVTLEAVDGSTLKLGFDPPASTGGEKVDKFRVEYSESPFNDEVQAL 1074
C W VTFT+ GN+ Q+ T AS + +V+ GDD I + T+ GTI+ IK ELE L+ V +V V A + TC W V F+ N G LPL++ + N+ + +T V G + +++ GTS+ LGG FAL +G R+ Y+ +ASA ++ LE L+T+G+V V+R D G+ W ++F +LGD+ L +D +++TGTAP V+E +GV P F+S D N L S +TDLSDLS+ ++E + +YFRV+A N G GP + + Y IP Q P+NV+L AVDG+T+ + P + GG +D +RVEY SP DEVQ +
Sbjct: 525 CTWQVTFTNQPGNVFQL--TAIPASSAATASNTVTIGDDTITLSTVTEGTINIIKTELERLTNVAQVTVTATAGA--KQTCTWSVTFDGNAGN------LPLMTVS----TNNGFSYGATGTVSG-DTITVAAGTDGTSVVLGGVFALEFEGQRTGYMPFDASAAVMQTQLETLSTIGSVAVKRSSADPN--NGFAWTVSFLNNLGDLQPLQSDARALTGTAPRIDVTEATKGVLPPFNSKDRINGLSFDSVVITDLSDLSVTAYHVDENVPFYFRVSAINAAGRGPSSYSTPQYGIPTAQVPSAPTNVSLSAVDGTTVAVRLSSPENDGGASLDSYRVEYGTSPIVDEVQQI 860
BLAST of mRNA_H-elongata_contig7332.15019.1 vs. uniprot
Match: A0A0W8BWL6_PHYNI (Twitchin n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8BWL6_PHYNI) HSP 1 Score: 221 bits (564), Expect = 1.050e-60 Identity = 142/354 (40.11%), Postives = 199/354 (56.21%), Query Frame = 1
Query: 16 CQWFVTFTDSSGNLDQVHTTMAVASDTEGPAFSVSAGDDVIMVETLVNGTIDAIKLELELLSTVGEVNVHARENGTVEDTCIWDVVFETNTGQEEDGGTLPLISAAFFYVENS-SYGDLSTSLVDGFNQVSIRRNRYGTSIRLGGDFALTLDGSRSRYLASNASARDVKLALEALNTVGTVDVERYDGDEEVYGGYTWLITFNTDLGDVNSLTTDIKSMTGTAPVFAVSENVQGVEPSFSSLDPYNSLPLGSATLTDLSDLSMIVSKLEEGLAYYFRVTASNYIGPGPPAVAGIPYVIPLPQPSDPPSNVTLEAVDGSTLKLGFDPPASTGGEKVDKFRVEYSESPFNDEVQAL 1074
C W VTF + GN+ Q+ AS + +VS GDD I + T+ +GTI+ IK ELE L+ V +V V A + TC W V F+ N G LPL++ + N SYG +T V G + +++ GTS LGG FAL +G R+ Y+ +ASA ++ LE L+T+G+V V R + D GY W I+F +LG++ L D ++TGTAP V+E +GV P F+S D N L S +TDLSDLS+ ++E + +YFRV+A N G GPP + Y IP Q P+NV+L AVDG+T+ + P + GG +D +RVEYS SP DEVQ +
Sbjct: 567 CTWQVTFNNQPGNVVQLKA--IPASSAAAASATVSIGDDTIALSTVTDGTINIIKTELERLANVAQVTVTATAGA--KQTCTWSVTFDGNAGN------LPLMTVS---TNNGVSYG--ATGTVSG-DTITVAAGTDGTSAVLGGVFALEYEGQRTGYMPFDASAAVMQTQLETLSTIGSVAVSRSNADPN--NGYAWTISFLNNLGNLQPLQPDALALTGTAPKIDVTEATKGVLPPFNSKDRTNGLSFDSVVITDLSDLSVTAYHVDENVPFYFRVSAINTAGRGPPTYSTPQYAIPTAQVPSAPTNVSLSAVDGTTVAVRLSSPENDGGASLDSYRVEYSTSPIVDEVQQI 902
BLAST of mRNA_H-elongata_contig7332.15019.1 vs. uniprot
Match: W2R3C1_PHYPN (Uncharacterized protein n=9 Tax=Phytophthora parasitica TaxID=4792 RepID=W2R3C1_PHYPN) HSP 1 Score: 221 bits (564), Expect = 1.240e-60 Identity = 142/354 (40.11%), Postives = 199/354 (56.21%), Query Frame = 1
Query: 16 CQWFVTFTDSSGNLDQVHTTMAVASDTEGPAFSVSAGDDVIMVETLVNGTIDAIKLELELLSTVGEVNVHARENGTVEDTCIWDVVFETNTGQEEDGGTLPLISAAFFYVENS-SYGDLSTSLVDGFNQVSIRRNRYGTSIRLGGDFALTLDGSRSRYLASNASARDVKLALEALNTVGTVDVERYDGDEEVYGGYTWLITFNTDLGDVNSLTTDIKSMTGTAPVFAVSENVQGVEPSFSSLDPYNSLPLGSATLTDLSDLSMIVSKLEEGLAYYFRVTASNYIGPGPPAVAGIPYVIPLPQPSDPPSNVTLEAVDGSTLKLGFDPPASTGGEKVDKFRVEYSESPFNDEVQAL 1074
C W VTF + GN+ Q+ AS + +VS GDD I + T+ +GTI+ IK ELE L+ V +V V A + TC W V F+ N G LPL++ + N SYG +T V G + +++ GTS LGG FAL +G R+ Y+ +ASA ++ LE L+T+G+V V R + D GY W I+F +LG++ L D ++TGTAP V+E +GV P F+S D N L S +TDLSDLS+ ++E + +YFRV+A N G GPP + Y IP Q P+NV+L AVDG+T+ + P + GG +D +RVEYS SP DEVQ +
Sbjct: 567 CTWQVTFNNQPGNVVQLKA--IPASSAAAASATVSIGDDTIALSTVTDGTINIIKTELERLANVAQVTVTATAGA--KQTCTWSVTFDGNAGN------LPLMTVS---TNNGVSYG--ATGTVSG-DTITVAAGTDGTSAVLGGVFALEYEGQRTGYMPFDASAAVMQTQLETLSTIGSVAVSRSNADPN--NGYAWTISFLNNLGNLQPLQPDALALTGTAPKIDVTEATKGVLPPFNSKDRTNGLSFDSVVITDLSDLSVTAYHVDENVPFYFRVSAINAAGRGPPTYSTPQYAIPTAQVPSAPTNVSLSAVDGTTVAVRLSSPENDGGASLDSYRVEYSTSPIVDEVQQI 902
BLAST of mRNA_H-elongata_contig7332.15019.1 vs. uniprot
Match: A0A0P1A7V0_PLAHL (Projectin/twitchin and related proteins n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A7V0_PLAHL) HSP 1 Score: 220 bits (561), Expect = 3.090e-60 Identity = 139/354 (39.27%), Postives = 205/354 (57.91%), Query Frame = 1
Query: 13 SCQWFVTFTDSSGNLDQVHTTMAVASDTEGPAFSVSAGDDVIMVETLVNGTIDAIKLELELLSTVGEVNVHARENGTVEDTCIWDVVFETNTGQEEDGGTLPLISAAFFYVENSSYGDLSTSLVDGFNQVSIRRNRYGTSIRLGGDFALTLDGSRSRYLASNASARDVKLALEALNTVGTVDVERYDGDEEVYGGYTWLITFNTDLGDVNSLTTDIKSMTGTAPVFAVSENVQGVEPSFSSLDPYNSLPLGSATLTDLSDLSMIVSKLEEGLAYYFRVTASNYIGPGPPAVAGIPYVIPLPQPSDPPSNVTLEAVDGSTLKLGFDPPASTGGEKVDKFRVEYSESPFNDEVQAL 1074
+C W VTFT+ GN+ Q+ A++ + SV+ GDD I + T+++GTI+ IK ELE L+ V +V V A + +C W V F+ N G LPL++ + N+ + V G + ++I + GTS LGG FAL +G R+ Y+ +ASA VK LE L+++G VDV R + D G+ W I+F T+LGD+ SL D ++TGTAP V+E +GV P F+S D NS+ S +TDLSDLS++ ++E + +Y RV+A N +G GP ++ Y IP Q P+NV+L A+DGST+ + F PA+ GG +D +R+EY S DEVQ +
Sbjct: 563 ACTWQVTFTNQPGNVVQLKVIPALSGAVA--STSVTIGDDTITLSTIIDGTINVIKTELERLTNVAQVTVTATAGP--KQSCTWRVTFDGNAGN------LPLMTVS----TNNGVSFGAAGTVSG-DTITIAASIDGTSSVLGGVFALEYEGQRTGYMPFDASASVVKTQLEVLSSIGNVDVTRSNADPN--NGFAWTISFVTNLGDLPSLQPDALALTGTAPRIDVTEAKKGVLPPFNSKDRINSISFDSLVVTDLSDLSVVAYHVDENVPFYCRVSAINAVGLGPHTMSTPQYAIPTAQVPGAPTNVSLSALDGSTVAVSFSSPANDGGAPLDAYRIEYGTSQLVDEVQQI 899
BLAST of mRNA_H-elongata_contig7332.15019.1 vs. uniprot
Match: A0A6A3P9D1_9STRA (Uncharacterized protein n=2 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3P9D1_9STRA) HSP 1 Score: 220 bits (561), Expect = 3.100e-60 Identity = 142/352 (40.34%), Postives = 204/352 (57.95%), Query Frame = 1
Query: 13 SCQWFVTFTDSSGNLDQVHTTMAVASDTEGPAFSVSAGDDVIMVETLVNGTIDAIKLELELLSTVGEVNVHARENGTVEDTCIWDVVFETNTGQEEDGGTLPLISAAFFYVENSSYGDLSTSLVDGFNQVSIRRNRYGTSIRLGGDFALTLDGSRSRYLASNASARDVKLALEALNTVGTVDVERYDGDEEVYGGYTWLITFNTDLGDVNSLTTDIKSMTGTAPVFAVSENVQGVEPSFSSLDPYNSLPLGSATLTDLSDLSMIVSKLEEGLAYYFRVTASNYIGPGPPAVAGIPYVIPLPQPSDPPSNVTLEAVDGSTLKLGFDPPASTGGEKVDKFRVEYSESPFNDEVQ 1068
+C W VTFT+ GN+ Q+ AS GPA +V+ GDD I + T+ +GTI+ IK ELE L+ V +V V A +GT + TC W V F+ N G LPL+S + +++G ST+ V G + V++ GTS LGG FAL +G R+ Y+ +ASA +K LE L+T+G+V V R D GY W ++F +LGD+ S D ++TGTAP V+E +GV P F+S D N L S +TDLSDLS+ ++E + +YFRV+A N G GP + + + +P Q P+NV+L AVDG+++ + P + GG +D +RVEY +P DEVQ
Sbjct: 566 ACVWQVTFTNQPGNVVQMKA--IAASSGAGPATAVTIGDDTISLTTVTDGTINMIKTELERLTNVAQVTVTAT-SGTKQ-TCTWSVTFDGNAGN------LPLMSVSTD--SGATFG--STATVSG-DTVTVAALTDGTSAVLGGVFALEFEGQRTGYMPFDASAAVLKTQLETLSTIGSVAVTRSSADPNK--GYAWTVSFLDNLGDLPSFQPDALALTGTAPKIDVTEATKGVLPPFNSKDRVNGLSFDSLVVTDLSDLSVTAYHVDENVPFYFRVSAINAAGLGPSSFSTPQFGVPTAQVPSVPTNVSLTAVDGTSIAVSLSSPENDGGASLDSYRVEYGSNPIVDEVQ 900
BLAST of mRNA_H-elongata_contig7332.15019.1 vs. uniprot
Match: A0A6A3UQQ2_9STRA (Uncharacterized protein n=6 Tax=Phytophthora TaxID=4783 RepID=A0A6A3UQQ2_9STRA) HSP 1 Score: 220 bits (561), Expect = 3.100e-60 Identity = 142/352 (40.34%), Postives = 204/352 (57.95%), Query Frame = 1
Query: 13 SCQWFVTFTDSSGNLDQVHTTMAVASDTEGPAFSVSAGDDVIMVETLVNGTIDAIKLELELLSTVGEVNVHARENGTVEDTCIWDVVFETNTGQEEDGGTLPLISAAFFYVENSSYGDLSTSLVDGFNQVSIRRNRYGTSIRLGGDFALTLDGSRSRYLASNASARDVKLALEALNTVGTVDVERYDGDEEVYGGYTWLITFNTDLGDVNSLTTDIKSMTGTAPVFAVSENVQGVEPSFSSLDPYNSLPLGSATLTDLSDLSMIVSKLEEGLAYYFRVTASNYIGPGPPAVAGIPYVIPLPQPSDPPSNVTLEAVDGSTLKLGFDPPASTGGEKVDKFRVEYSESPFNDEVQ 1068
+C W VTFT+ GN+ Q+ AS GPA +V+ GDD I + T+ +GTI+ IK ELE L+ V +V V A +GT + TC W V F+ N G LPL+S + +++G ST+ V G + V++ GTS LGG FAL +G R+ Y+ +ASA +K LE L+T+G+V V R D GY W ++F +LGD+ S D ++TGTAP V+E +GV P F+S D N L S +TDLSDLS+ ++E + +YFRV+A N G GP + + + +P Q P+NV+L AVDG+++ + P + GG +D +RVEY +P DEVQ
Sbjct: 890 ACVWQVTFTNQPGNVVQMKA--IAASSGAGPATAVTTGDDTISLTTVTDGTINMIKTELERLTNVAQVTVTAT-SGTKQ-TCTWSVTFDGNAGN------LPLMSVSTD--SGATFG--STATVSG-DTVTVAALTDGTSTVLGGVFALEFEGQRTGYMPFDASAAVLKTQLETLSTIGSVAVTRSSADPNK--GYAWTVSFLDNLGDLPSFQPDALALTGTAPNIDVTEATKGVLPPFNSKDRVNGLSFDSLVVTDLSDLSVTAYHVDENVPFYFRVSAINAAGLGPSSFSTPQFGVPTAQVPSVPTNVSLTAVDGTSIAVSLSSPENDGGASLDSYRVEYGSNPIVDEVQ 1224 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig7332.15019.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig7332.15019.1 >prot_H-elongata_contig7332.15019.1 ID=prot_H-elongata_contig7332.15019.1|Name=mRNA_H-elongata_contig7332.15019.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=372bp GADDSCQWFVTFTDSSGNLDQVHTTMAVASDTEGPAFSVSAGDDVIMVETback to top mRNA from alignment at H-elongata_contig7332:922..3515- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig7332.15019.1 ID=mRNA_H-elongata_contig7332.15019.1|Name=mRNA_H-elongata_contig7332.15019.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2594bp|location=Sequence derived from alignment at H-elongata_contig7332:922..3515- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig7332:922..3515- >mRNA_H-elongata_contig7332.15019.1 ID=mRNA_H-elongata_contig7332.15019.1|Name=mRNA_H-elongata_contig7332.15019.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2232bp|location=Sequence derived from alignment at H-elongata_contig7332:922..3515- (Himanthalia elongata Himel1 dioecious)back to top |