mRNA_H-elongata_contig73314.15017.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig73314.15017.1 vs. uniprot
Match: D7FPR0_ECTSI (Sulfatase-modifying factor 2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPR0_ECTSI) HSP 1 Score: 376 bits (965), Expect = 9.470e-126 Identity = 187/278 (67.27%), Postives = 210/278 (75.54%), Query Frame = 1
Query: 4 FRIDKHPVTNDNFAAFVADSSYVTEAENFQWSFVLEYLLDAETIKEADDGIGRVQGSEYWVGVEGANWRQPEGPRSSLEKRGDFPVVQVSWVDADAYCKWAGRRLPTEAEWEYAARGGQVVIEEGSKDNRAGGWSVGNAWQGEFPTKNSLEDGYAGPSPATKFPPNALGIYDMLGNVWEWVDGGEPARRTLRGGSFVDYDPHQVSEEAAGESPSMGQGTVPTRGANHAITPGTRMETTQDSGSINTSFRCASGSNTSGTKRTVKRKGQQGRKGASADS 837
F ID+H VTN+ FA FV DS YVTEAE F WSF LEY+LDAETIKEAD+GIGRV+GSE+WVGVEGANWRQPEGPRSSL+ RG+ PV QVSWVDADAYC WAGRRLPTEAEWEYAARGGQ + E D W VGN+WQG FP NS+EDGYAG +PAT F PNAL +YDMLGN WEWV GG+P RRTLRGGSFVD+DP V+ E + G +P + ANHAITPGTRMETTQDSGS NTSFRCA ++ + G RK AS +S
Sbjct: 30 FNIDEHCVTNEQFAIFVKDSGYVTEAEKFGWSFALEYMLDAETIKEADEGIGRVKGSEHWVGVEGANWRQPEGPRSSLKSRGNVPVAQVSWVDADAYCSWAGRRLPTEAEWEYAARGGQTLASEHVGDKSTKMWLVGNSWQGHFPNTNSVEDGYAGLAPATAFAPNALEVYDMLGNAWEWVAGGDPTRRTLRGGSFVDFDP--VAAEK-----NNGSSGIPRQPANHAITPGTRMETTQDSGSANTSFRCA---------QSPLKSGGTSRKEASRES 291
BLAST of mRNA_H-elongata_contig73314.15017.1 vs. uniprot
Match: A0A7S2Y1G9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y1G9_9STRA) HSP 1 Score: 234 bits (597), Expect = 2.800e-70 Identity = 122/253 (48.22%), Postives = 154/253 (60.87%), Query Frame = 1
Query: 1 SFRIDKHPVTNDNFAAFVADSSYVTEAENFQWSFVLEYLLDAETIKEADDGIGRVQGSEYWVGVEGANWRQPEGPRSSLEKRGDFPVVQVSWVDADAYCKWAGRRLPTEAEWEYAARGGQVVIEEGSKDNRAGGWSVGNAWQGEFPTKNSLEDGYAGPSPATKFPPNALGIYDMLGNVWEWVDGGEPARRTLRGGSFVDYDPHQVSEEAAGESPSMGQGTVPTRGANHAITPGTRMETTQDSGSINTSFRCAS 759
+F +D+H VTN+ F F+ D+ Y T+A+ F WSFVL Y ET +AD+ +GR++G W+GV A W P GP S +E D PVVQVSW DA AYCKWAGRRL E EWEYAAR G +V + A + N WQG+FP KN++EDGYAG +P F PN+ G Y+M+GNVWEWV GG +R L+GGSF+D S +A+ NH TR TT DSG++NT FRCAS
Sbjct: 51 AFWLDEHAVTNEQFIDFINDTGYETDADKFGWSFVLAYFASEETTIKADNDMGRIEGDPSWLGVREATWEHPLGPDSDVEDILDHPVVQVSWNDARAYCKWAGRRLAREKEWEYAARSG-LVGQPFPWGKEATPQQL-NYWQGDFPLKNNVEDGYAGTAPVKSFEPNSFGFYNMVGNVWEWVGGGSKEKRILKGGSFID------SIDAS---------------FNHPALVSTRQLTTADSGNMNTGFRCAS 280
BLAST of mRNA_H-elongata_contig73314.15017.1 vs. uniprot
Match: A0A8J2SID5_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SID5_9STRA) HSP 1 Score: 235 bits (599), Expect = 3.500e-70 Identity = 124/256 (48.44%), Postives = 156/256 (60.94%), Query Frame = 1
Query: 1 SFRIDKHPVTNDNFAAFVADSSYVTEAENFQWSFVLEYLLDAETIKEADD--GIGRVQGSEYWVGVEGANWRQPEGPRSSLEKRGDFPVVQVSWVDADAYCKWAGRRLPTEAEWEYAARGG--QVVIEEGSKDNRAGGWSVGNAWQGEFPTKNSLEDGYAGPSPATKFPPNALGIYDMLGNVWEWVDGGEPARRTLRGGSFVDYDPHQVSEEAAGESPSMGQGTVPTRGANHAITPGTRMETTQDSGSINTSFRCA 756
+F ID V+ND F FV + + TEAE F+WSFVLE L TI ++D G+GRVQ S +W+GV GA WR+PEGP SS+ +G++PV+QVSW DA AYC WAG+RLP+E EWE AARGG G +D+ N W+G FP +N +DGY G +P ++ PNA G+Y+ +GNVWEW GG P +R LRGGSFVD TV NHA+ TRM+ T DSG NT FRCA
Sbjct: 92 TFDIDATVVSNDEFKKFVRATKHETEAEKFRWSFVLEMLASNATINQSDSKHGLGRVQSSPHWLGVYGATWRKPEGPDSSIRGKGNYPVIQVSWNDAVAYCAWAGKRLPSELEWETAARGGLEDEPFPWGDRDDDV--HKRMNGWEGAFPDENLAKDGYIGVAPVDQYAPNAFGVYNAVGNVWEWCAGGTPEKRPLRGGSFVD--------------------TVD-GSHNHALRCATRMDQTADSGGHNTGFRCA 324
BLAST of mRNA_H-elongata_contig73314.15017.1 vs. uniprot
Match: A0A8J5XF83_DIALT (FGE-sulfatase domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XF83_DIALT) HSP 1 Score: 232 bits (591), Expect = 4.360e-68 Identity = 125/255 (49.02%), Postives = 155/255 (60.78%), Query Frame = 1
Query: 4 FRIDKHPVTNDNFAAFVADSSYVTEAENFQWSFVLEYLLDAETIK--EADDGIGRVQGSEYWVGVEGANWRQPEGPRSSLEKRGDFPVVQVSWVDADAYCKWAGRRLPTEAEWEYAARGGQVVIEEGSKDNRAGGWSVGNAWQGEFPTKNSLEDGYAGPSPATKFPPNALGIYDMLGNVWEWVDGGEPARRTLRGGSFVDYDPHQVSEEAAGESPSMGQGTVPTRGANHAITPGTRMETTQDSGSINTSFRCASG 762
F I+ VTN F AFV + Y T+AE F+WSF L LDAET+ +AD G+GR++ + +WVGV GA WRQPEGPRSS+ R D PVV S+ DA A+C WAGRRLPTE EWE+AARG ++ E G ++ N WQG FP N+ DGYAG PA + PNA G+Y+ +GNVWEW GG+ +R LRGGSFVD +V R NH + TRM+ DSGS N FRCA+G
Sbjct: 88 FSIEDAAVTNAQFRAFVRATGYKTDAERFRWSFALAPFLDAETLARADADGGLGRLRDAPHWVGVAGAYWRQPEGPRSSIRGREDHPVVHASYNDALAFCTWAGRRLPTELEWEFAARG-RINDEPFPWGGDEDGGTL-NGWQGPFPDGNTRADGYAGTCPARAYAPNAYGLYNTVGNVWEWASGGDDKKRPLRGGSFVD--------------------SVDGR-TNHPLRVSTRMDNAADSGSFNIGFRCAAG 319
BLAST of mRNA_H-elongata_contig73314.15017.1 vs. uniprot
Match: F0XYZ8_AURAN (FGE-sulfatase domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XYZ8_AURAN) HSP 1 Score: 222 bits (566), Expect = 6.230e-67 Identity = 106/185 (57.30%), Postives = 126/185 (68.11%), Query Frame = 1
Query: 1 SFRIDKHPVTNDNFAAFVADSSYVTEAENFQWSFVLEYLLDAETIKEAD--DGIGRVQGSEYWVGVEGANWRQPEGPRSSLEKRGDFPVVQVSWVDADAYCKWAGRRLPTEAEWEYAARGG--QVVIEEGSKDNRAGGWSVGNAWQGEFPTKNSLEDGYAGPSPATKFPPNALGIYDMLGNVWEW 543
+FRID V+ND F FV D+ Y+TEAENF+WSFVLE TI ++D +G+GRVQ S +W+GV GA WR+PEGP SSL RGD P +SW DA AYCKWAGRRLPTE EWE AARGG G D+ W+ NAW+GEFP +NS DG+ GP P + PNA GIY+ LGNVWEW
Sbjct: 28 AFRIDPTAVSNDQFKRFVRDTQYLTEAENFRWSFVLELTASNATINQSDAKNGLGRVQASPWWMGVFGAYWRKPEGPDSSLRGRGDHPATHISWNDASAYCKWAGRRLPTEVEWEMAARGGLEDEPFPWGDADHDP--WTRLNAWEGEFPDENSARDGFVGPGPVDAYAPNAFGIYNALGNVWEW 210
BLAST of mRNA_H-elongata_contig73314.15017.1 vs. uniprot
Match: A0A7S2SNU0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SNU0_9STRA) HSP 1 Score: 219 bits (557), Expect = 8.410e-63 Identity = 127/303 (41.91%), Postives = 168/303 (55.45%), Query Frame = 1
Query: 1 SFRIDKHPVTNDNFAAFVADSSYVTEAENFQWSFVLEYLLDAETIKEAD--DGIGRVQGSEYWVGVEGANWRQPEGPRSSLEKRGDFPVVQVSWVDADAYCKWAGRRLPTEAEWEYAARGGQVVIEEGSKDNRAGGWSVGNAWQGEFPTKNSLEDGYAGPSPATKFPPNALGIYDMLGNVWEWVDGGEPARRTLRGGSFVDYDPHQVSEEAAGESPSMGQGTVPTRGANHAITPGTRMETTQDSGSINTSFRCASGSNTSGTKRTVKRKG-QQGRKGASADSEL*VVF---LLGLNIY*SGMG 891
+F ID V+N F FV + Y T+AE F+WSFVLEYL +T+ D G GRV+ + +W+ V+GA WR+PEGP SSL R PV VS+ DA AYC+WAGRRLPTE EWE+AARGG + +E A + N W G+FP+ N L DG+ G P F PN G+Y+M+GNVWEWV+ G R +RGGS++D T+ R NHA+ +R DSG +T FRCASG + +R + +G G G S + V+ + GL Y + MG
Sbjct: 119 TFSIDITAVSNSQFQKFVRATKYKTDAEKFEWSFVLEYLASKDTVDAVDGESGYGRVKDAPHWMAVQGAYWRRPEGPGSSLRGRASHPVTHVSYNDAKAYCEWAGRRLPTEREWEHAARGG--LEDEPFPWGSAALSNRMNGWTGDFPSANDLSDGFDGTCPVDTFLPNDFGLYNMVGNVWEWVEAGSEQERVVRGGSYID--------------------TIDGR-HNHALRVSSRQVVPPDSGGGSTGFRCASGDLVNSDRREIAIEGLDPGADGMSQEKLQKVIAEGGVEGLTRYLAEMG 398
BLAST of mRNA_H-elongata_contig73314.15017.1 vs. uniprot
Match: A0A7S3YFE4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YFE4_HETAK) HSP 1 Score: 214 bits (545), Expect = 2.110e-62 Identity = 116/261 (44.44%), Postives = 150/261 (57.47%), Query Frame = 1
Query: 4 FRIDKHPVTNDNFAAFVAD------SSYVTEAENFQWSFVLEYLLDAETIK--EADDGIGRVQGSEYWVGVEGANWRQPEGPRSSLEK--RGDFPVVQVSWVDADAYCKWAGRRLPTEAEWEYAARGGQVVIEEGSKDNRAGGWSVGNAWQGEFPTKNSLEDGYAGPSPATKFPPNALGIYDMLGNVWEWVDGGEPARRTLRGGSFVDYDPHQVSEEAAGESPSMGQGTVPTRGANHAITPGTRMETTQDSGSINTSFRCA 756
F+I+K V+N+ F FV D Y T+A+ F WSFVL+ L E + ++D+G+GR+Q + +WVGV ANWR PEG S + K + D P + +SW DA AYCKWAGRRLP E EWEYAARGG + A + + N WQG FP +N+ EDG+A +P F PN G+Y+ +GN WEWV GG+P R LRGGSF+D S + A NH + +R T DSGS NT FRCA
Sbjct: 72 FQIEKCAVSNEQFKIFVEDVERTTGKPYQTDADKFGWSFVLDSTLSKEQLDFADSDEGMGRIQNAPHWVGVLKANWRHPEGEDSDVFKQDKADHPAIHISWNDAKAYCKWAGRRLPKEREWEYAARGGHDGLPYPWGIPEASPFDM-NYWQGAFPRENTAEDGFATTAPVAAFAPNHFGLYNTVGNTWEWVAGGQPEARVLRGGSFLD------SLDGA---------------FNHPVMTSSRQLNTADSGSYNTGFRCA 310
BLAST of mRNA_H-elongata_contig73314.15017.1 vs. uniprot
Match: UPI001FEA6B4F (formylglycine-generating enzyme family protein n=1 Tax=Bacillus tamaricis TaxID=2069301 RepID=UPI001FEA6B4F) HSP 1 Score: 212 bits (540), Expect = 6.830e-62 Identity = 116/254 (45.67%), Postives = 147/254 (57.87%), Query Frame = 1
Query: 1 SFRIDKHPVTNDNFAAFVADSSYVTEAENFQWSFVLEYLLDAETIKEADDGIGRVQGSEYWVGVEGANWRQPEGPRSSLEKRGDFPVVQVSWVDADAYCKWAGRRLPTEAEWEYAARGG-QVVIEEGSKDNRAGGWSVGNAWQGEFPTKNSLEDGYAGPSPATKFPPNALGIYDMLGNVWEWVDGGEPARRTLRGGSFVDYDPHQVSEEAAGESPSMGQGTVPTRGAN-HAITPGTRMETTQDSGSINTSFRCA 756
SF +D + VTN F AF+ D+ YVTEAE F WSFV L+ ET K+ I +V+ + +W VEGA W PEGP S++E R D PV+ VSW DA+ YC+WAG+RLPTEAEWEYAARGG + + D G N WQG+FP KN+LEDGY G +PA FPPN G++++ GNVWEW + RGGS P A G+S M G+ + + R T DS + N FRCA
Sbjct: 49 SFYMDAYAVTNREFHAFIKDTGYVTEAERFGWSFVFYQLVSKETAKKV---IQQVESTPWWWVVEGATWNHPEGPDSTIEGRWDHPVIHVSWNDAETYCEWAGKRLPTEAEWEYAARGGLEQKLYPWGDDLNPSGKHYCNIWQGQFPGKNTLEDGYLGTAPAKSFPPNNFGLFNVAGNVWEWCSDWFTNQSENRGGSENPQGP------ATGDSKVMRGGSYLCHHSYCNRYRVAARTSNTPDSSTGNIGFRCA 293
BLAST of mRNA_H-elongata_contig73314.15017.1 vs. uniprot
Match: A0A812H9J1_9DINO (SUMF2 protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812H9J1_9DINO) HSP 1 Score: 212 bits (540), Expect = 5.810e-61 Identity = 123/278 (44.24%), Postives = 156/278 (56.12%), Query Frame = 1
Query: 1 SFRIDKHPVTNDNFAAFVADSSYVTEAENFQWSFVLEYLLDAETIKEADDGIGRVQGSEYWVGVEGANWRQPEGPRSSLEKRG-DFPVVQVSWVDADAYCKWAGRRLPTEAEWEYAARGGQ---VVIEEGSKDNRAGGWSVGNAWQGEFPTKNSLEDGYAGPSPATKFPPNALGIYDMLGNVWEWVDGGEPARR-------TLRGGSFVDYDPHQVSEEAAGESPSMGQGTVPTRGANHAITPGTRMETTQDSGSINTSFRCASGSNTSGTKRTVKRK 801
++ ID+ PVTN +F FV ++ + T+AE + WSFVL L ++E+ I + + +WV VE A WR PEG SSL+ R D+PVV +SW DA+AYC+WAG+RLPTEAEWE AARG + + E S G W + N WQG FP +N LEDGY SP +P N+ G++ +GNVWEW P R TL+GGSF+D AGE NH T TRM T DSGS NT FRCASG G KR +K
Sbjct: 67 AYAIDETPVTNSHFREFVKETKFKTDAERYGWSFVLNSSLSQAVLRESPQHI---ESAPHWVAVENAWWRHPEGRDSSLKDRWEDYPVVHISWTDANAYCEWAGKRLPTEAEWENAARGKRKESLYPWEDSDVPGKGRWKM-NIWQGRFPFENLLEDGYHAISPVKAYPANSYGVFSTVGNVWEWTSDPFPGSRPEEEPQWTLKGGSFID--------SPAGEF-------------NHKATVVTRMGNTADSGSYNTGFRCASGKGGGGRKRPPDQK 319
BLAST of mRNA_H-elongata_contig73314.15017.1 vs. uniprot
Match: A0A7S2ME14_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2ME14_9STRA) HSP 1 Score: 210 bits (535), Expect = 9.050e-61 Identity = 118/260 (45.38%), Postives = 153/260 (58.85%), Query Frame = 1
Query: 4 FRIDKHPVTNDNFAAFVADSSYVTEAENFQWSFVLEYLLDAETIKEADD--GIGRVQGSEYWVGVEGANWRQPEGPRSSLEKRGDFPVVQVSWVDADAYCKWAGRRLPTEAEWEYAARGG--QVVIEEGSKDNRAGGWSVGNAWQGEFPTKNSLEDGYAGPSPATKFPPNALGIYDMLGNVWEWVDG---GEPARRTLRGGSFVDYDPHQVSEEAAGESPSMGQGTVPTRGANHAITPGTRMETTQDSGSINTSFRCASG 762
F +D VTN F FV ++ + TEAE +QWSFVLEYL E ++E D G GRV+ + +W+ V+GA WR+PEG S+L RG+ PVV VS+ D+ AYC+WAGRRLP E EWEY ARGG GS D R N W G FPT+NS D YAG +P + PNA G+Y+M+GNVWEW +G GE + +RGGS++D ++ E NHA+ +R + DSG N+ FRCASG
Sbjct: 19 FGLDITTVTNTQFQKFVRETKFRTEAEIYQWSFVLEYLAAPEIVEEVDSPQGYGRVKDAHHWMAVKGAYWRRPEGIGSNLRGRGNHPVVHVSYNDSLAYCEWAGRRLPMEKEWEYVARGGLEDEPFPWGS-DPRP---EKCNGWTGNFPTENSKLDQYAGTAPVDFYEPNAYGVYNMVGNVWEWTEGKRGGEEKEKAIRGGSYIDT----INGEY-----------------NHALRVSSRQMVSADSGGGNSGFRCASG 253 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig73314.15017.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig73314.15017.1 >prot_H-elongata_contig73314.15017.1 ID=prot_H-elongata_contig73314.15017.1|Name=mRNA_H-elongata_contig73314.15017.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=109bp MLGNVWEWVDGGEPARRTLRGGSFVDYDPHQVSEEAAGESPSMGQGTVPTback to top mRNA from alignment at H-elongata_contig73314:244..3119+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig73314.15017.1 ID=mRNA_H-elongata_contig73314.15017.1|Name=mRNA_H-elongata_contig73314.15017.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2876bp|location=Sequence derived from alignment at H-elongata_contig73314:244..3119+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig73314:244..3119+ >mRNA_H-elongata_contig73314.15017.1 ID=mRNA_H-elongata_contig73314.15017.1|Name=mRNA_H-elongata_contig73314.15017.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=654bp|location=Sequence derived from alignment at H-elongata_contig73314:244..3119+ (Himanthalia elongata Himel1 dioecious)back to top |