mRNA_H-elongata_contig73314.15016.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig73314.15016.1
Unique NamemRNA_H-elongata_contig73314.15016.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig73314.15016.1 vs. uniprot
Match: D7FPR0_ECTSI (Sulfatase-modifying factor 2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPR0_ECTSI)

HSP 1 Score: 250 bits (639), Expect = 8.400e-81
Identity = 119/173 (68.79%), Postives = 133/173 (76.88%), Query Frame = 1
Query:    4 FRIDKHPVTNDNFAAFVADSSYVTEAENFQWSFVLEWVLPPDCSFLFNEADDGIGRVQGSEYWVGVEGANWRQPEGPRSSLEKRGDFPVVQVSWVDADAYCKWAGRRLPTEAEWEYAARGGQVVIEEGSKDNRAGGWSVGNAWQGEFPTKNSLEDGYAGPSPATKFPPNALGV 522
            F ID+H VTN+ FA FV DS YVTEAE F WSF LE++L  +      EAD+GIGRV+GSE+WVGVEGANWRQPEGPRSSL+ RG+ PV QVSWVDADAYC WAGRRLPTEAEWEYAARGGQ +  E   D     W VGN+WQG FP  NS+EDGYAG +PAT F PNAL V
Sbjct:   30 FNIDEHCVTNEQFAIFVKDSGYVTEAEKFGWSFALEYMLDAE---TIKEADEGIGRVKGSEHWVGVEGANWRQPEGPRSSLKSRGNVPVAQVSWVDADAYCSWAGRRLPTEAEWEYAARGGQTLASEHVGDKSTKMWLVGNSWQGHFPNTNSVEDGYAGLAPATAFAPNALEV 199          
BLAST of mRNA_H-elongata_contig73314.15016.1 vs. uniprot
Match: F0XYZ8_AURAN (FGE-sulfatase domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XYZ8_AURAN)

HSP 1 Score: 196 bits (498), Expect = 1.300e-60
Identity = 95/176 (53.98%), Postives = 118/176 (67.05%), Query Frame = 1
Query:    1 SFRIDKHPVTNDNFAAFVADSSYVTEAENFQWSFVLEWVLPPDCSFLFNEADDGIGRVQGSEYWVGVEGANWRQPEGPRSSLEKRGDFPVVQVSWVDADAYCKWAGRRLPTEAEWEYAARGG--QVVIEEGSKDNRAGGWSVGNAWQGEFPTKNSLEDGYAGPSPATKFPPNALGV 522
            +FRID   V+ND F  FV D+ Y+TEAENF+WSFVLE +   + +   ++A +G+GRVQ S +W+GV GA WR+PEGP SSL  RGD P   +SW DA AYCKWAGRRLPTE EWE AARGG        G  D+    W+  NAW+GEFP +NS  DG+ GP P   + PNA G+
Sbjct:   28 AFRIDPTAVSNDQFKRFVRDTQYLTEAENFRWSFVLE-LTASNATINQSDAKNGLGRVQASPWWMGVFGAYWRKPEGPDSSLRGRGDHPATHISWNDASAYCKWAGRRLPTEVEWEMAARGGLEDEPFPWGDADHDP--WTRLNAWEGEFPDENSARDGFVGPGPVDAYAPNAFGI 200          
BLAST of mRNA_H-elongata_contig73314.15016.1 vs. uniprot
Match: UPI0019317242 (formylglycine-generating enzyme family protein n=1 Tax=Streptomyces pratensis TaxID=1169025 RepID=UPI0019317242)

HSP 1 Score: 181 bits (458), Expect = 4.600e-53
Identity = 92/175 (52.57%), Postives = 107/175 (61.14%), Query Frame = 1
Query:    1 SFRIDKHPVTNDNFAAFVADSSYVTEAENFQWSFVLEWVLPPDCSFLFNEADDGIGRVQGSEYWVGVEGANWRQPEGPRSSLEKRGDFPVVQVSWVDADAYCKWAGRRLPTEAEWEYAARGGQVVIEEGSKDNRA-GGWSVGNAWQGEFPTKNSLEDGYAGPSPATKFPPNALGV 522
            +FRID H V+N  FA FV+ + +VTEAE F WS+V    LP        E   G GR  G+ +W GVEGA W  PEGP S +E R D PVV VSW DA AYC+WAG RLPTEAEWEYAARGG         D    GG    N WQG FPTKN+ +DGY G +P   + PNA G+
Sbjct:   84 AFRIDAHSVSNRRFADFVSATGHVTEAERFGWSYVFAGFLPA-------ELRRGAGRPDGTPWWCGVEGARWNMPEGPGSGIEGREDHPVVHVSWNDARAYCRWAGARLPTEAEWEYAARGGLEQARYPWGDELTPGGEHRCNIWQGHFPTKNTADDGYVGTAPVDAYQPNAFGL 251          
BLAST of mRNA_H-elongata_contig73314.15016.1 vs. uniprot
Match: A0A0K1JQH0_9MICO (FGE-sulfatase domain-containing protein n=2 Tax=Luteipulveratus mongoliensis TaxID=571913 RepID=A0A0K1JQH0_9MICO)

HSP 1 Score: 178 bits (452), Expect = 1.870e-52
Identity = 88/170 (51.76%), Postives = 110/170 (64.71%), Query Frame = 1
Query:    4 FRIDKHPVTNDNFAAFVADSSYVTEAENFQWSFVLEWVLPPDCSFLFNEADDGIGRVQGSEYWVGVEGANWRQPEGPRSSLEKRGDFPVVQVSWVDADAYCKWAGRRLPTEAEWEYAARGGQVVIEEG-SKDNRAGGWSVGNAWQGEFPTKNSLEDGYAGPSPATKFPPN 510
            F ID+  V+ND+FAAFV  S YVTEAE + WS+V          FL +E      R++ + +W GVEGA WR PEGP S+L+ R D PVV VSW DA AY +WAG+RLPTEA+WEYAARGG         ++   GG  + N WQG FP KN+L+DG+AG +P   FPPN
Sbjct:   53 FLIDRFAVSNDDFAAFVEASGYVTEAERYGWSYVF-------AGFLASELRRISPRLEATPWWAGVEGAQWRSPEGPGSTLQGRADHPVVHVSWDDAQAYAQWAGKRLPTEAQWEYAARGGHEQRRYSWGEELTPGGAHMANIWQGRFPVKNTLDDGFAGTAPVDAFPPN 215          
BLAST of mRNA_H-elongata_contig73314.15016.1 vs. uniprot
Match: A0A2V2Q6C1_9ACTN (Serine/threonine protein phosphatase n=4 Tax=unclassified Streptomyces TaxID=2593676 RepID=A0A2V2Q6C1_9ACTN)

HSP 1 Score: 179 bits (454), Expect = 2.260e-52
Identity = 92/174 (52.87%), Postives = 107/174 (61.49%), Query Frame = 1
Query:    4 FRIDKHPVTNDNFAAFVADSSYVTEAENFQWSFVLEWVLPPDCSFLFNEADDGIGRVQGSEYWVGVEGANWRQPEGPRSSLEKRGDFPVVQVSWVDADAYCKWAGRRLPTEAEWEYAARGGQVVIEEGSKDNRA-GGWSVGNAWQGEFPTKNSLEDGYAGPSPATKFPPNALGV 522
            FRID H V+N  FA FV+ + +VTEAE F WS+V    LP            G GR +G+ +W GVEGA W  PEGP S +E RGD PVV VSW DA AY +WAG RLPTEAEWEYAARGG         D    GG    N WQG FPT+N+ EDGYAG +PA  + PN  G+
Sbjct:   93 FRIDAHAVSNRRFAEFVSATGHVTEAERFGWSYVFAGFLPAALR-------RGAGRPEGTPWWCGVEGARWDAPEGPGSGIEDRGDHPVVHVSWNDARAYSRWAGARLPTEAEWEYAARGGLEQARYPWGDELTPGGEHRCNIWQGRFPTRNTAEDGYAGTAPADAYQPNGFGL 259          
BLAST of mRNA_H-elongata_contig73314.15016.1 vs. uniprot
Match: G2NK71_STREK (FGE-sulfatase domain-containing protein n=7 Tax=unclassified Streptomyces TaxID=2593676 RepID=G2NK71_STREK)

HSP 1 Score: 178 bits (452), Expect = 2.960e-52
Identity = 90/176 (51.14%), Postives = 107/176 (60.80%), Query Frame = 1
Query:    1 SFRIDKHPVTNDNFAAFVADSSYVTEAENFQWSFVLEWVLPPDCSFLFNEADDGIGRVQGSEYWVGVEGANWRQPEGPRSSLEKRGDFPVVQVSWVDADAYCKWAGRRLPTEAEWEYAARGGQVVIEEGSKDNRA-GGWSVGNAWQGEFPTKNSLEDGYAGPSPATKFPPNALGVR 525
            +FR++ H V+N+ FA FVA + +VTEAE F WS+V    LP            G  R  G+ +W GVEGA W  PEGP S L+ R D PVV VSW DA AYC+WAG RLPTEAEWEYAARGG         D    GG    N WQG FP KN++EDGYAG +P   +PPN  G+ 
Sbjct:   76 AFRVEAHAVSNERFARFVAATGHVTEAERFGWSYVFAGFLPAALR-------RGAPRPDGTPWWCGVEGARWNAPEGPGSGLDGREDHPVVHVSWNDARAYCRWAGTRLPTEAEWEYAARGGLEQRRYPWGDELTPGGEHRCNIWQGRFPVKNTVEDGYAGTAPVDAYPPNGFGLH 244          
BLAST of mRNA_H-elongata_contig73314.15016.1 vs. uniprot
Match: A0A7K2JHH8_9ACTN (SUMF1/EgtB/PvdO family nonheme iron enzyme n=2 Tax=Streptomyces sp. SID5910 TaxID=2690312 RepID=A0A7K2JHH8_9ACTN)

HSP 1 Score: 178 bits (451), Expect = 3.120e-52
Identity = 92/174 (52.87%), Postives = 106/174 (60.92%), Query Frame = 1
Query:    4 FRIDKHPVTNDNFAAFVADSSYVTEAENFQWSFVLEWVLPPDCSFLFNEADDGIGRVQGSEYWVGVEGANWRQPEGPRSSLEKRGDFPVVQVSWVDADAYCKWAGRRLPTEAEWEYAARGGQVVIEEGSKDNRA-GGWSVGNAWQGEFPTKNSLEDGYAGPSPATKFPPNALGV 522
            FRID + VTN  F  FV  + +VTEAE F WS+V    LP            G  R QG+ +W GVEGA WR PEGP S+++ RGD PVV VSW DA AYC+WAG RLPTEAEWEYAARGG         D    GG    N WQG+FPTKN+ EDGY G +P   F PN  G+
Sbjct:   66 FRIDAYAVTNARFTRFVEATGHVTEAERFGWSYVFAGFLPAALR-------RGAARPQGTPWWCGVEGAYWRAPEGPGSTVDDRGDHPVVHVSWNDALAYCRWAGARLPTEAEWEYAARGGLEQRRYPWGDELTPGGTHRCNIWQGQFPTKNTAEDGYRGTAPVDAFEPNGFGL 232          
BLAST of mRNA_H-elongata_contig73314.15016.1 vs. uniprot
Match: A0A7K2F6Q0_9ACTN (SUMF1/EgtB/PvdO family nonheme iron enzyme n=6 Tax=Streptomyces TaxID=1883 RepID=A0A7K2F6Q0_9ACTN)

HSP 1 Score: 178 bits (452), Expect = 3.380e-52
Identity = 91/175 (52.00%), Postives = 104/175 (59.43%), Query Frame = 1
Query:    1 SFRIDKHPVTNDNFAAFVADSSYVTEAENFQWSFVLEWVLPPDCSFLFNEADDGIGRVQGSEYWVGVEGANWRQPEGPRSSLEKRGDFPVVQVSWVDADAYCKWAGRRLPTEAEWEYAARGGQVVIEEGSKDNRA-GGWSVGNAWQGEFPTKNSLEDGYAGPSPATKFPPNALGV 522
            +FRID H V+N  FA FV+ + YVTEAE F WS+V    LP            G GR   + +W GVEGA W  PEGP S +  RGD PV  VSW DA AYC+WAG RLPTEAEWEYAARGG         D    GG    N WQG FPTKN+ EDGYAG +P   + PN  G+
Sbjct:   81 AFRIDAHAVSNQRFAEFVSATGYVTEAERFGWSYVFAGFLPAALR-------RGAGRPDATPWWCGVEGARWDAPEGPGSGIGDRGDHPVAHVSWNDARAYCRWAGARLPTEAEWEYAARGGLEQARYPWGDELTPGGEHRCNIWQGHFPTKNTAEDGYAGTAPVDAYEPNGFGL 248          
BLAST of mRNA_H-elongata_contig73314.15016.1 vs. uniprot
Match: A0A499VDX4_9ACTN (FGE-sulfatase domain-containing protein n=4 Tax=Streptomyces TaxID=1883 RepID=A0A499VDX4_9ACTN)

HSP 1 Score: 177 bits (448), Expect = 3.750e-52
Identity = 91/175 (52.00%), Postives = 107/175 (61.14%), Query Frame = 1
Query:    1 SFRIDKHPVTNDNFAAFVADSSYVTEAENFQWSFVLEWVLPPDCSFLFNEADDGIGRVQGSEYWVGVEGANWRQPEGPRSSLEKRGDFPVVQVSWVDADAYCKWAGRRLPTEAEWEYAARGGQVVIEEGSKDNRA-GGWSVGNAWQGEFPTKNSLEDGYAGPSPATKFPPNALGV 522
            +FRID H VTN+ FA FV ++ +VTEAE F WS+V    LP            G  R +G+ +W GVEGA+WR PEGP S + +R   PVV VSW DA AYC+WAG RLPTEAEWEYAARGG V       D    GG    N WQG FP KN+ EDGY G +P   F PN  G+
Sbjct:   34 AFRIDVHAVTNERFARFVRETGHVTEAERFGWSYVFAGFLPAALR-------RGAPRPEGTPWWCGVEGASWRAPEGPGSEVGERSRHPVVHVSWNDAVAYCRWAGARLPTEAEWEYAARGGLVGRRYPWGDELTPGGVHRCNIWQGRFPVKNTAEDGYRGTAPVDAFEPNGFGL 201          
BLAST of mRNA_H-elongata_contig73314.15016.1 vs. uniprot
Match: UPI001FEA6B4F (formylglycine-generating enzyme family protein n=1 Tax=Bacillus tamaricis TaxID=2069301 RepID=UPI001FEA6B4F)

HSP 1 Score: 177 bits (449), Expect = 4.260e-52
Identity = 88/175 (50.29%), Postives = 111/175 (63.43%), Query Frame = 1
Query:    1 SFRIDKHPVTNDNFAAFVADSSYVTEAENFQWSFVLEWVLPPDCSFLFNEADDGIGRVQGSEYWVGVEGANWRQPEGPRSSLEKRGDFPVVQVSWVDADAYCKWAGRRLPTEAEWEYAARGG-QVVIEEGSKDNRAGGWSVGNAWQGEFPTKNSLEDGYAGPSPATKFPPNALGV 522
            SF +D + VTN  F AF+ D+ YVTEAE F WSFV   ++  +       A   I +V+ + +W  VEGA W  PEGP S++E R D PV+ VSW DA+ YC+WAG+RLPTEAEWEYAARGG +  +     D    G    N WQG+FP KN+LEDGY G +PA  FPPN  G+
Sbjct:   49 SFYMDAYAVTNREFHAFIKDTGYVTEAERFGWSFVFYQLVSKET------AKKVIQQVESTPWWWVVEGATWNHPEGPDSTIEGRWDHPVIHVSWNDAETYCEWAGKRLPTEAEWEYAARGGLEQKLYPWGDDLNPSGKHYCNIWQGQFPGKNTLEDGYLGTAPAKSFPPNNFGL 217          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig73314.15016.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FPR0_ECTSI8.400e-8168.79Sulfatase-modifying factor 2 n=1 Tax=Ectocarpus si... [more]
F0XYZ8_AURAN1.300e-6053.98FGE-sulfatase domain-containing protein (Fragment)... [more]
UPI00193172424.600e-5352.57formylglycine-generating enzyme family protein n=1... [more]
A0A0K1JQH0_9MICO1.870e-5251.76FGE-sulfatase domain-containing protein n=2 Tax=Lu... [more]
A0A2V2Q6C1_9ACTN2.260e-5252.87Serine/threonine protein phosphatase n=4 Tax=uncla... [more]
G2NK71_STREK2.960e-5251.14FGE-sulfatase domain-containing protein n=7 Tax=un... [more]
A0A7K2JHH8_9ACTN3.120e-5252.87SUMF1/EgtB/PvdO family nonheme iron enzyme n=2 Tax... [more]
A0A7K2F6Q0_9ACTN3.380e-5252.00SUMF1/EgtB/PvdO family nonheme iron enzyme n=6 Tax... [more]
A0A499VDX4_9ACTN3.750e-5252.00FGE-sulfatase domain-containing protein n=4 Tax=St... [more]
UPI001FEA6B4F4.260e-5250.29formylglycine-generating enzyme family protein n=1... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig73314contigH-elongata_contig73314:244..1555 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score250.0
Seed ortholog evalue8.5e-64
Seed eggNOG ortholog2880.D7FPR0
KEGG koko:K13444
KEGG Pathwayko04142,map04142
EggNOG free text desc.Formylglycine-generating oxidase activity
EggNOG OGs2QVDG@2759,COG1262@1
EC1.8.3.7
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Hectar predicted targeting categoryother localisation
Exons3
Model size540
Cds size540
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig73314.15016.1prot_H-elongata_contig73314.15016.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig73314 244..1555 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931135.9911413-CDS-H-elongata_contig73314:243..3901622931135.9911413-CDS-H-elongata_contig73314:243..390Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig73314 244..390 +
1691679713.2718978-CDS-H-elongata_contig73314:243..3901691679713.2718978-CDS-H-elongata_contig73314:243..390Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig73314 244..390 +
1622931136.005809-CDS-H-elongata_contig73314:735..9111622931136.005809-CDS-H-elongata_contig73314:735..911Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig73314 736..911 +
1691679713.2848592-CDS-H-elongata_contig73314:735..9111691679713.2848592-CDS-H-elongata_contig73314:735..911Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig73314 736..911 +
1622931136.0178902-CDS-H-elongata_contig73314:1338..15551622931136.0178902-CDS-H-elongata_contig73314:1338..1555Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig73314 1339..1555 +
1691679713.2948124-CDS-H-elongata_contig73314:1338..15551691679713.2948124-CDS-H-elongata_contig73314:1338..1555Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig73314 1339..1555 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig73314.15016.1

>prot_H-elongata_contig73314.15016.1 ID=prot_H-elongata_contig73314.15016.1|Name=mRNA_H-elongata_contig73314.15016.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=180bp
SFRIDKHPVTNDNFAAFVADSSYVTEAENFQWSFVLEWVLPPDCSFLFNE
ADDGIGRVQGSEYWVGVEGANWRQPEGPRSSLEKRGDFPVVQVSWVDADA
YCKWAGRRLPTEAEWEYAARGGQVVIEEGSKDNRAGGWSVGNAWQGEFPT
KNSLEDGYAGPSPATKFPPNALGVRLPLV*
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mRNA from alignment at H-elongata_contig73314:244..1555+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig73314.15016.1 ID=mRNA_H-elongata_contig73314.15016.1|Name=mRNA_H-elongata_contig73314.15016.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1312bp|location=Sequence derived from alignment at H-elongata_contig73314:244..1555+ (Himanthalia elongata Himel1 dioecious)
TCATTTCGCATCGATAAGCATCCAGTCACGAACGATAACTTCGCAGCCTT CGTGGCGGATTCGAGCTACGTCACTGAGGCGGAAAATTTCCAGTGGAGTT TCGTGCTTGAGTGGGTGCTTCCTCCAGATTGCTCTTTCCTTTTTAATGTA TTTTTTAAATGTCAAATTGCACATGTCGAGCCACAAGATTTCCTCTCTTG CTGCTATTAATACCAACGCTGCCCGCTTGGGAGCCATGTACGCTGCCCGA TATCTTTTGAGGTCCAATGTTCAGCTAAACATGCCCACCGTCGCGTATGC CGTGTACCGTATACTTTGGAGGTTGTCACGAGTGGCGGTAAATTGTTTTC ATACCATACCGTTACATTTCTTGATTTCGATGAATCTGTAGCCGGGCTTG CGCGATGTTAACATTTTCAAATCTTGTGACATTTGGTCGCTTCGTTTTTA CCCTTATGGCCCAGGTATCTGCTTGATGCAGAGACTATCAAGGAAGCTGA CGATGGCATCGGAAGAGTCCAGGGTTCGGAATACTGGGTTGGGGTGGAAG GTGCAAACTGGCGACAACCGGAGGGGCCACGATCGTCACTCGAGAAGAGA GGAGACTTCCCGGTGGTGCAGGTTTCGTGGGTGGATGCCGACGCTTATTG CAAATGGGCTGGCAGACGGTAAGCGAAAGAAAAACGCTGAGGAATGATAT GCGATGATGGTTTACAACGAGGGTGATATGCGATGAAGCCATTAAAGTTT CTCTAGACCCTTGCGCAGAAGCCATTGGTATTTAAGGCGTATGCCGCGAG AACCGAGGCGTTAAAAACGCGCGCCATCGCCATCCCCCGACGTTTGAGAC TGATAGATCTTCGTCGTGATCGCCGAAAAGAGTATCGCTTGCCAATATCA CCGTCACCGTCACGCTGAGAGACCCAACAATACGGGATCAATATAACACC ATAACATCATCACACTATCACACACCATGACGCTAACGTGTGACGGATAA TCTGCCTCGAAGGACGAAGAGATTTGAGCATAATATCTCTAGCGGGGATC CCCTGAAAACTGAAAACTAACGTAACTCAATGGTGTGCATGGCAGACTTC CGACTGAAGCTGAGTGGGAATACGCAGCTCGCGGCGGCCAGGTTGTTATT GAGGAAGGCTCAAAAGACAACCGGGCGGGGGGTTGGAGTGTGGGAAATGC TTGGCAGGGGGAATTTCCGACAAAAAATTCTCTTGAGGACGGGTACGCGG GACCTTCCCCTGCCACAAAATTCCCTCCAAATGCTTTAGGGGTGAGATTG CCTTTAGTCTAG
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Coding sequence (CDS) from alignment at H-elongata_contig73314:244..1555+

>mRNA_H-elongata_contig73314.15016.1 ID=mRNA_H-elongata_contig73314.15016.1|Name=mRNA_H-elongata_contig73314.15016.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1080bp|location=Sequence derived from alignment at H-elongata_contig73314:244..1555+ (Himanthalia elongata Himel1 dioecious)
TCATTTCGCATCGATAAGCATCCAGTCACGAACGATAACTTCGCAGCCTT
CGTGGCGGATTCGAGCTACGTCACTGAGGCGGAAAATTTCCAGTGGAGTT
TCGTGCTTGAGTGGGTGCTTCCTCCAGATTGCTCTTTCCTTTTTAATTCA
TTTCGCATCGATAAGCATCCAGTCACGAACGATAACTTCGCAGCCTTCGT
GGCGGATTCGAGCTACGTCACTGAGGCGGAAAATTTCCAGTGGAGTTTCG
TGCTTGAGTGGGTGCTTCCTCCAGATTGCTCTTTCCTTTTTAATGAAGCT
GACGATGGCATCGGAAGAGTCCAGGGTTCGGAATACTGGGTTGGGGTGGA
AGGTGCAAACTGGCGACAACCGGAGGGGCCACGATCGTCACTCGAGAAGA
GAGGAGACTTCCCGGTGGTGCAGGTTTCGTGGGTGGATGCCGACGCTTAT
TGCAAATGGGCTGGCAGACGGAAGCTGACGATGGCATCGGAAGAGTCCAG
GGTTCGGAATACTGGGTTGGGGTGGAAGGTGCAAACTGGCGACAACCGGA
GGGGCCACGATCGTCACTCGAGAAGAGAGGAGACTTCCCGGTGGTGCAGG
TTTCGTGGGTGGATGCCGACGCTTATTGCAAATGGGCTGGCAGACGACTT
CCGACTGAAGCTGAGTGGGAATACGCAGCTCGCGGCGGCCAGGTTGTTAT
TGAGGAAGGCTCAAAAGACAACCGGGCGGGGGGTTGGAGTGTGGGAAATG
CTTGGCAGGGGGAATTTCCGACAAAAAATTCTCTTGAGGACGGGTACGCG
GGACCTTCCCCTGCCACAAAATTCCCTCCAAATGCTTTAGGGGTGAGATT
GCCTTTAGTCTAGACTTCCGACTGAAGCTGAGTGGGAATACGCAGCTCGC
GGCGGCCAGGTTGTTATTGAGGAAGGCTCAAAAGACAACCGGGCGGGGGG
TTGGAGTGTGGGAAATGCTTGGCAGGGGGAATTTCCGACAAAAAATTCTC
TTGAGGACGGGTACGCGGGACCTTCCCCTGCCACAAAATTCCCTCCAAAT
GCTTTAGGGGTGAGATTGCCTTTAGTCTAG
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