mRNA_H-elongata_contig73314.15016.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig73314.15016.1 vs. uniprot
Match: D7FPR0_ECTSI (Sulfatase-modifying factor 2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPR0_ECTSI) HSP 1 Score: 250 bits (639), Expect = 8.400e-81 Identity = 119/173 (68.79%), Postives = 133/173 (76.88%), Query Frame = 1
Query: 4 FRIDKHPVTNDNFAAFVADSSYVTEAENFQWSFVLEWVLPPDCSFLFNEADDGIGRVQGSEYWVGVEGANWRQPEGPRSSLEKRGDFPVVQVSWVDADAYCKWAGRRLPTEAEWEYAARGGQVVIEEGSKDNRAGGWSVGNAWQGEFPTKNSLEDGYAGPSPATKFPPNALGV 522
F ID+H VTN+ FA FV DS YVTEAE F WSF LE++L + EAD+GIGRV+GSE+WVGVEGANWRQPEGPRSSL+ RG+ PV QVSWVDADAYC WAGRRLPTEAEWEYAARGGQ + E D W VGN+WQG FP NS+EDGYAG +PAT F PNAL V
Sbjct: 30 FNIDEHCVTNEQFAIFVKDSGYVTEAEKFGWSFALEYMLDAE---TIKEADEGIGRVKGSEHWVGVEGANWRQPEGPRSSLKSRGNVPVAQVSWVDADAYCSWAGRRLPTEAEWEYAARGGQTLASEHVGDKSTKMWLVGNSWQGHFPNTNSVEDGYAGLAPATAFAPNALEV 199
BLAST of mRNA_H-elongata_contig73314.15016.1 vs. uniprot
Match: F0XYZ8_AURAN (FGE-sulfatase domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XYZ8_AURAN) HSP 1 Score: 196 bits (498), Expect = 1.300e-60 Identity = 95/176 (53.98%), Postives = 118/176 (67.05%), Query Frame = 1
Query: 1 SFRIDKHPVTNDNFAAFVADSSYVTEAENFQWSFVLEWVLPPDCSFLFNEADDGIGRVQGSEYWVGVEGANWRQPEGPRSSLEKRGDFPVVQVSWVDADAYCKWAGRRLPTEAEWEYAARGG--QVVIEEGSKDNRAGGWSVGNAWQGEFPTKNSLEDGYAGPSPATKFPPNALGV 522
+FRID V+ND F FV D+ Y+TEAENF+WSFVLE + + + ++A +G+GRVQ S +W+GV GA WR+PEGP SSL RGD P +SW DA AYCKWAGRRLPTE EWE AARGG G D+ W+ NAW+GEFP +NS DG+ GP P + PNA G+
Sbjct: 28 AFRIDPTAVSNDQFKRFVRDTQYLTEAENFRWSFVLE-LTASNATINQSDAKNGLGRVQASPWWMGVFGAYWRKPEGPDSSLRGRGDHPATHISWNDASAYCKWAGRRLPTEVEWEMAARGGLEDEPFPWGDADHDP--WTRLNAWEGEFPDENSARDGFVGPGPVDAYAPNAFGI 200
BLAST of mRNA_H-elongata_contig73314.15016.1 vs. uniprot
Match: UPI0019317242 (formylglycine-generating enzyme family protein n=1 Tax=Streptomyces pratensis TaxID=1169025 RepID=UPI0019317242) HSP 1 Score: 181 bits (458), Expect = 4.600e-53 Identity = 92/175 (52.57%), Postives = 107/175 (61.14%), Query Frame = 1
Query: 1 SFRIDKHPVTNDNFAAFVADSSYVTEAENFQWSFVLEWVLPPDCSFLFNEADDGIGRVQGSEYWVGVEGANWRQPEGPRSSLEKRGDFPVVQVSWVDADAYCKWAGRRLPTEAEWEYAARGGQVVIEEGSKDNRA-GGWSVGNAWQGEFPTKNSLEDGYAGPSPATKFPPNALGV 522
+FRID H V+N FA FV+ + +VTEAE F WS+V LP E G GR G+ +W GVEGA W PEGP S +E R D PVV VSW DA AYC+WAG RLPTEAEWEYAARGG D GG N WQG FPTKN+ +DGY G +P + PNA G+
Sbjct: 84 AFRIDAHSVSNRRFADFVSATGHVTEAERFGWSYVFAGFLPA-------ELRRGAGRPDGTPWWCGVEGARWNMPEGPGSGIEGREDHPVVHVSWNDARAYCRWAGARLPTEAEWEYAARGGLEQARYPWGDELTPGGEHRCNIWQGHFPTKNTADDGYVGTAPVDAYQPNAFGL 251
BLAST of mRNA_H-elongata_contig73314.15016.1 vs. uniprot
Match: A0A0K1JQH0_9MICO (FGE-sulfatase domain-containing protein n=2 Tax=Luteipulveratus mongoliensis TaxID=571913 RepID=A0A0K1JQH0_9MICO) HSP 1 Score: 178 bits (452), Expect = 1.870e-52 Identity = 88/170 (51.76%), Postives = 110/170 (64.71%), Query Frame = 1
Query: 4 FRIDKHPVTNDNFAAFVADSSYVTEAENFQWSFVLEWVLPPDCSFLFNEADDGIGRVQGSEYWVGVEGANWRQPEGPRSSLEKRGDFPVVQVSWVDADAYCKWAGRRLPTEAEWEYAARGGQVVIEEG-SKDNRAGGWSVGNAWQGEFPTKNSLEDGYAGPSPATKFPPN 510
F ID+ V+ND+FAAFV S YVTEAE + WS+V FL +E R++ + +W GVEGA WR PEGP S+L+ R D PVV VSW DA AY +WAG+RLPTEA+WEYAARGG ++ GG + N WQG FP KN+L+DG+AG +P FPPN
Sbjct: 53 FLIDRFAVSNDDFAAFVEASGYVTEAERYGWSYVF-------AGFLASELRRISPRLEATPWWAGVEGAQWRSPEGPGSTLQGRADHPVVHVSWDDAQAYAQWAGKRLPTEAQWEYAARGGHEQRRYSWGEELTPGGAHMANIWQGRFPVKNTLDDGFAGTAPVDAFPPN 215
BLAST of mRNA_H-elongata_contig73314.15016.1 vs. uniprot
Match: A0A2V2Q6C1_9ACTN (Serine/threonine protein phosphatase n=4 Tax=unclassified Streptomyces TaxID=2593676 RepID=A0A2V2Q6C1_9ACTN) HSP 1 Score: 179 bits (454), Expect = 2.260e-52 Identity = 92/174 (52.87%), Postives = 107/174 (61.49%), Query Frame = 1
Query: 4 FRIDKHPVTNDNFAAFVADSSYVTEAENFQWSFVLEWVLPPDCSFLFNEADDGIGRVQGSEYWVGVEGANWRQPEGPRSSLEKRGDFPVVQVSWVDADAYCKWAGRRLPTEAEWEYAARGGQVVIEEGSKDNRA-GGWSVGNAWQGEFPTKNSLEDGYAGPSPATKFPPNALGV 522
FRID H V+N FA FV+ + +VTEAE F WS+V LP G GR +G+ +W GVEGA W PEGP S +E RGD PVV VSW DA AY +WAG RLPTEAEWEYAARGG D GG N WQG FPT+N+ EDGYAG +PA + PN G+
Sbjct: 93 FRIDAHAVSNRRFAEFVSATGHVTEAERFGWSYVFAGFLPAALR-------RGAGRPEGTPWWCGVEGARWDAPEGPGSGIEDRGDHPVVHVSWNDARAYSRWAGARLPTEAEWEYAARGGLEQARYPWGDELTPGGEHRCNIWQGRFPTRNTAEDGYAGTAPADAYQPNGFGL 259
BLAST of mRNA_H-elongata_contig73314.15016.1 vs. uniprot
Match: G2NK71_STREK (FGE-sulfatase domain-containing protein n=7 Tax=unclassified Streptomyces TaxID=2593676 RepID=G2NK71_STREK) HSP 1 Score: 178 bits (452), Expect = 2.960e-52 Identity = 90/176 (51.14%), Postives = 107/176 (60.80%), Query Frame = 1
Query: 1 SFRIDKHPVTNDNFAAFVADSSYVTEAENFQWSFVLEWVLPPDCSFLFNEADDGIGRVQGSEYWVGVEGANWRQPEGPRSSLEKRGDFPVVQVSWVDADAYCKWAGRRLPTEAEWEYAARGGQVVIEEGSKDNRA-GGWSVGNAWQGEFPTKNSLEDGYAGPSPATKFPPNALGVR 525
+FR++ H V+N+ FA FVA + +VTEAE F WS+V LP G R G+ +W GVEGA W PEGP S L+ R D PVV VSW DA AYC+WAG RLPTEAEWEYAARGG D GG N WQG FP KN++EDGYAG +P +PPN G+
Sbjct: 76 AFRVEAHAVSNERFARFVAATGHVTEAERFGWSYVFAGFLPAALR-------RGAPRPDGTPWWCGVEGARWNAPEGPGSGLDGREDHPVVHVSWNDARAYCRWAGTRLPTEAEWEYAARGGLEQRRYPWGDELTPGGEHRCNIWQGRFPVKNTVEDGYAGTAPVDAYPPNGFGLH 244
BLAST of mRNA_H-elongata_contig73314.15016.1 vs. uniprot
Match: A0A7K2JHH8_9ACTN (SUMF1/EgtB/PvdO family nonheme iron enzyme n=2 Tax=Streptomyces sp. SID5910 TaxID=2690312 RepID=A0A7K2JHH8_9ACTN) HSP 1 Score: 178 bits (451), Expect = 3.120e-52 Identity = 92/174 (52.87%), Postives = 106/174 (60.92%), Query Frame = 1
Query: 4 FRIDKHPVTNDNFAAFVADSSYVTEAENFQWSFVLEWVLPPDCSFLFNEADDGIGRVQGSEYWVGVEGANWRQPEGPRSSLEKRGDFPVVQVSWVDADAYCKWAGRRLPTEAEWEYAARGGQVVIEEGSKDNRA-GGWSVGNAWQGEFPTKNSLEDGYAGPSPATKFPPNALGV 522
FRID + VTN F FV + +VTEAE F WS+V LP G R QG+ +W GVEGA WR PEGP S+++ RGD PVV VSW DA AYC+WAG RLPTEAEWEYAARGG D GG N WQG+FPTKN+ EDGY G +P F PN G+
Sbjct: 66 FRIDAYAVTNARFTRFVEATGHVTEAERFGWSYVFAGFLPAALR-------RGAARPQGTPWWCGVEGAYWRAPEGPGSTVDDRGDHPVVHVSWNDALAYCRWAGARLPTEAEWEYAARGGLEQRRYPWGDELTPGGTHRCNIWQGQFPTKNTAEDGYRGTAPVDAFEPNGFGL 232
BLAST of mRNA_H-elongata_contig73314.15016.1 vs. uniprot
Match: A0A7K2F6Q0_9ACTN (SUMF1/EgtB/PvdO family nonheme iron enzyme n=6 Tax=Streptomyces TaxID=1883 RepID=A0A7K2F6Q0_9ACTN) HSP 1 Score: 178 bits (452), Expect = 3.380e-52 Identity = 91/175 (52.00%), Postives = 104/175 (59.43%), Query Frame = 1
Query: 1 SFRIDKHPVTNDNFAAFVADSSYVTEAENFQWSFVLEWVLPPDCSFLFNEADDGIGRVQGSEYWVGVEGANWRQPEGPRSSLEKRGDFPVVQVSWVDADAYCKWAGRRLPTEAEWEYAARGGQVVIEEGSKDNRA-GGWSVGNAWQGEFPTKNSLEDGYAGPSPATKFPPNALGV 522
+FRID H V+N FA FV+ + YVTEAE F WS+V LP G GR + +W GVEGA W PEGP S + RGD PV VSW DA AYC+WAG RLPTEAEWEYAARGG D GG N WQG FPTKN+ EDGYAG +P + PN G+
Sbjct: 81 AFRIDAHAVSNQRFAEFVSATGYVTEAERFGWSYVFAGFLPAALR-------RGAGRPDATPWWCGVEGARWDAPEGPGSGIGDRGDHPVAHVSWNDARAYCRWAGARLPTEAEWEYAARGGLEQARYPWGDELTPGGEHRCNIWQGHFPTKNTAEDGYAGTAPVDAYEPNGFGL 248
BLAST of mRNA_H-elongata_contig73314.15016.1 vs. uniprot
Match: A0A499VDX4_9ACTN (FGE-sulfatase domain-containing protein n=4 Tax=Streptomyces TaxID=1883 RepID=A0A499VDX4_9ACTN) HSP 1 Score: 177 bits (448), Expect = 3.750e-52 Identity = 91/175 (52.00%), Postives = 107/175 (61.14%), Query Frame = 1
Query: 1 SFRIDKHPVTNDNFAAFVADSSYVTEAENFQWSFVLEWVLPPDCSFLFNEADDGIGRVQGSEYWVGVEGANWRQPEGPRSSLEKRGDFPVVQVSWVDADAYCKWAGRRLPTEAEWEYAARGGQVVIEEGSKDNRA-GGWSVGNAWQGEFPTKNSLEDGYAGPSPATKFPPNALGV 522
+FRID H VTN+ FA FV ++ +VTEAE F WS+V LP G R +G+ +W GVEGA+WR PEGP S + +R PVV VSW DA AYC+WAG RLPTEAEWEYAARGG V D GG N WQG FP KN+ EDGY G +P F PN G+
Sbjct: 34 AFRIDVHAVTNERFARFVRETGHVTEAERFGWSYVFAGFLPAALR-------RGAPRPEGTPWWCGVEGASWRAPEGPGSEVGERSRHPVVHVSWNDAVAYCRWAGARLPTEAEWEYAARGGLVGRRYPWGDELTPGGVHRCNIWQGRFPVKNTAEDGYRGTAPVDAFEPNGFGL 201
BLAST of mRNA_H-elongata_contig73314.15016.1 vs. uniprot
Match: UPI001FEA6B4F (formylglycine-generating enzyme family protein n=1 Tax=Bacillus tamaricis TaxID=2069301 RepID=UPI001FEA6B4F) HSP 1 Score: 177 bits (449), Expect = 4.260e-52 Identity = 88/175 (50.29%), Postives = 111/175 (63.43%), Query Frame = 1
Query: 1 SFRIDKHPVTNDNFAAFVADSSYVTEAENFQWSFVLEWVLPPDCSFLFNEADDGIGRVQGSEYWVGVEGANWRQPEGPRSSLEKRGDFPVVQVSWVDADAYCKWAGRRLPTEAEWEYAARGG-QVVIEEGSKDNRAGGWSVGNAWQGEFPTKNSLEDGYAGPSPATKFPPNALGV 522
SF +D + VTN F AF+ D+ YVTEAE F WSFV ++ + A I +V+ + +W VEGA W PEGP S++E R D PV+ VSW DA+ YC+WAG+RLPTEAEWEYAARGG + + D G N WQG+FP KN+LEDGY G +PA FPPN G+
Sbjct: 49 SFYMDAYAVTNREFHAFIKDTGYVTEAERFGWSFVFYQLVSKET------AKKVIQQVESTPWWWVVEGATWNHPEGPDSTIEGRWDHPVIHVSWNDAETYCEWAGKRLPTEAEWEYAARGGLEQKLYPWGDDLNPSGKHYCNIWQGQFPGKNTLEDGYLGTAPAKSFPPNNFGL 217 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig73314.15016.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig73314.15016.1 >prot_H-elongata_contig73314.15016.1 ID=prot_H-elongata_contig73314.15016.1|Name=mRNA_H-elongata_contig73314.15016.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=180bp SFRIDKHPVTNDNFAAFVADSSYVTEAENFQWSFVLEWVLPPDCSFLFNEback to top mRNA from alignment at H-elongata_contig73314:244..1555+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig73314.15016.1 ID=mRNA_H-elongata_contig73314.15016.1|Name=mRNA_H-elongata_contig73314.15016.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1312bp|location=Sequence derived from alignment at H-elongata_contig73314:244..1555+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig73314:244..1555+ >mRNA_H-elongata_contig73314.15016.1 ID=mRNA_H-elongata_contig73314.15016.1|Name=mRNA_H-elongata_contig73314.15016.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1080bp|location=Sequence derived from alignment at H-elongata_contig73314:244..1555+ (Himanthalia elongata Himel1 dioecious)back to top |