mRNA_H-elongata_contig72969.14975.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig72969.14975.1 vs. uniprot
Match: D7FKP6_ECTSI (Protein kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKP6_ECTSI) HSP 1 Score: 178 bits (452), Expect = 3.730e-49 Identity = 87/132 (65.91%), Postives = 103/132 (78.03%), Query Frame = 1
Query: 1 MSTSLDAVDLGSNTAQDVSAGQSHTCVLLTSGNVTCFGYNYYGQLGLGDRTTRGLSPSDMGENLGLVNLGSNRTASRIGCGQHHTCAVLDDASLKCWGINNKGMLGLGDTKNRGDEDIELGDNLPTVDLGTG 396
MS++L VDLG NT V+AGQSHTCVLL SGNV C+G+N YGQLGLGD RG S SDMGE L +V+LG+ RTA+ I CGQ+HTCA+LD +LKCWG N+ G LGLGDT NRG+ + +GDNLP VDLGTG
Sbjct: 99 MSSNLPEVDLGGNTVLQVAAGQSHTCVLLASGNVACWGFNEYGQLGLGDTEHRGNSSSDMGEGLAVVDLGTGRTATHIACGQYHTCAILDIGALKCWGYNSFGALGLGDTDNRGEANDTMGDNLPFVDLGTG 230
BLAST of mRNA_H-elongata_contig72969.14975.1 vs. uniprot
Match: A0A6H5JPT1_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPT1_9PHAE) HSP 1 Score: 176 bits (446), Expect = 2.390e-48 Identity = 86/132 (65.15%), Postives = 102/132 (77.27%), Query Frame = 1
Query: 1 MSTSLDAVDLGSNTAQDVSAGQSHTCVLLTSGNVTCFGYNYYGQLGLGDRTTRGLSPSDMGENLGLVNLGSNRTASRIGCGQHHTCAVLDDASLKCWGINNKGMLGLGDTKNRGDEDIELGDNLPTVDLGTG 396
MS++L VDLG NT V+AGQSHTCVLL SG+V C+G+N YGQLGLGD RG S SDMGE L +V+LG+ RTA+ I CGQ+HTCA+LD SLKCWG NN G LGLGDT +RG + +GD LP+VDLGTG
Sbjct: 1 MSSNLPQVDLGGNTVLQVAAGQSHTCVLLASGDVACWGFNEYGQLGLGDTQHRGTSSSDMGEGLAVVDLGTGRTATHIACGQYHTCAILDIGSLKCWGRNNYGALGLGDTDDRGQTNDTMGDQLPSVDLGTG 132
BLAST of mRNA_H-elongata_contig72969.14975.1 vs. uniprot
Match: A0A3M1P0V4_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A3M1P0V4_9BACT) HSP 1 Score: 148 bits (374), Expect = 2.500e-42 Identity = 73/133 (54.89%), Postives = 92/133 (69.17%), Query Frame = 1
Query: 1 MSTSLDAVDLGSNTAQDVSAGQSHTCVLLTSGNVTCFGYNYYGQLGLGDRTTRGLSPSDMGENLGLVNLGSNRTASRIGCGQHHTCAVLDDASLKCWGINNKGMLGLGDTKNRGDEDIELGDNLPTVDLGTGK 399
M T+L AVDLG+ V AG +HTC LL + V C+G N GQLGLGD+ TRG P +MG +L ++LG+ RT + I G TCA LD+A++KCWG N+ G LGLGDT +RGD E+GDNLP VDLGTG+
Sbjct: 83 MGTNLPAVDLGTGVISGVEAGSTHTCALLDNATVKCWGSNVNGQLGLGDKLTRGDDPGEMGNSLPPIDLGAGRTPTAIAAGGSFTCARLDNATVKCWGANSDGQLGLGDTSDRGDAPGEMGDNLPAVDLGTGR 215
BLAST of mRNA_H-elongata_contig72969.14975.1 vs. uniprot
Match: A0A383CPK5_9ZZZZ (Uncharacterized protein (Fragment) n=1 Tax=marine metagenome TaxID=408172 RepID=A0A383CPK5_9ZZZZ) HSP 1 Score: 147 bits (370), Expect = 1.910e-41 Identity = 73/134 (54.48%), Postives = 94/134 (70.15%), Query Frame = 1
Query: 1 MSTSLDAVDLGSN-TAQDVSAGQSHTCVLLTSGNVTCFGYNYYGQLGLGDRTTRGLSPSDMGENLGLVNLGSNRTASRIGCGQHHTCAVLDDASLKCWGINNKGMLGLGDTKNRGDEDIELGDNLPTVDLGTGK 399
M SL VDLG+ TA+ + AG +HTC +L + +V C+G N GQLGLGD +RG + S+MG++L +VN+GS RTA I G HTCA+LD+A +KCWG N G LGLGD NRGD E+G NL TVDLG+G+
Sbjct: 87 MGDSLPVVDLGTGKTARAIEAGDNHTCAILDNASVKCWGSNASGQLGLGDTDSRGDNSSEMGDSLPIVNMGSGRTAKAIAAGYAHTCAILDNAYVKCWGSNTSGQLGLGDINNRGDNSSEMGGNLTTVDLGSGR 220
BLAST of mRNA_H-elongata_contig72969.14975.1 vs. uniprot
Match: A0A017SY21_9DELT (Uncharacterized protein n=2 Tax=Chondromyces apiculatus TaxID=51 RepID=A0A017SY21_9DELT) HSP 1 Score: 155 bits (391), Expect = 2.790e-41 Identity = 80/134 (59.70%), Postives = 95/134 (70.90%), Query Frame = 1
Query: 1 MSTSLDAVDLGSN-TAQDVSAGQSHTCVLLTSGNVTCFGYNYYGQLGLGDRTTRGLSPSDMGENLGLVNLGSNRTASRIGCGQHHTCAVLDDASLKCWGINNKGMLGLGDTKNRGDEDIELGDNLPTVDLGTGK 399
M SL AV LG+ +A VSA HTCVLL G+V C+GYN YGQLGLG +RG SPSDMG NL VNLG+ +TA+ + G +TCAVL+D S+KCWG N+ G LGLGDT NRG +GDNLP V+LGTGK
Sbjct: 431 MGDSLPAVALGTGQSAIAVSAAGGHTCVLLNGGSVKCWGYNTYGQLGLGSPASRGTSPSDMGNNLPAVNLGTGKTATLVSAGSQYTCAVLNDGSVKCWGNNDYGQLGLGDTFNRGTGSTSMGDNLPVVNLGTGK 564
BLAST of mRNA_H-elongata_contig72969.14975.1 vs. uniprot
Match: A0A835T669_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A835T669_9CHLO) HSP 1 Score: 147 bits (370), Expect = 2.930e-39 Identity = 72/134 (53.73%), Postives = 93/134 (69.40%), Query Frame = 1
Query: 1 MSTSLDAVDLGSN-TAQDVSAGQSHTCVLLTSGNVTCFGYNYYGQLGLGDRTTRGLSPSDMGENLGLVNLGSNRTASRIGCGQHHTCAVLDDASLKCWGINNKGMLGLGDTKNRGDEDIELGDNLPTVDLGTGK 399
M +L A+ LG+ TA +S G HTC LL +G+V C+GYN YGQLGLGD + RG P +MG+ L + LG+ RTA+ I G +HTCA+LD+ S+KCWG N G LGLGDT +RGD E+GD LP + LGTG+
Sbjct: 149 MGDTLPAITLGTGRTATAISVGGIHTCALLDNGSVKCWGYNAYGQLGLGDTSDRGDGPGEMGDTLPAITLGTGRTAAAISVGGYHTCALLDNGSIKCWGYNAYGQLGLGDTSSRGDGPGEMGDTLPAITLGTGR 282
BLAST of mRNA_H-elongata_contig72969.14975.1 vs. uniprot
Match: L7UHS0_MYXSD (RCC1 repeat-containing protein n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) TaxID=1278073 RepID=L7UHS0_MYXSD) HSP 1 Score: 144 bits (362), Expect = 6.720e-39 Identity = 71/134 (52.99%), Postives = 94/134 (70.15%), Query Frame = 1
Query: 1 MSTSLDAVDLGSN-TAQDVSAGQSHTCVLLTSGNVTCFGYNYYGQLGLGDRTTRGLSPSDMGENLGLVNLGSNRTASRIGCGQHHTCAVLDDASLKCWGINNKGMLGLGDTKNRGDEDIELGDNLPTVDLGTGK 399
M +L V+LG+ TA+ ++AG++H+C +L G V C+G N YGQLGLGD+ +RG+ P +MG+ L V LG RTA+ I G HTCA+LDD ++KCWG N G LGLGD RGD E+GD LP+VDLGTG+
Sbjct: 121 MGDALPTVNLGTKRTAKAITAGRAHSCAILDDGAVKCWGGNEYGQLGLGDKASRGVEPDEMGDALPEVKLGVGRTATAIAAGNLHTCAILDDGAVKCWGDNGYGRLGLGDKSGRGDAPGEMGDALPSVDLGTGR 254
BLAST of mRNA_H-elongata_contig72969.14975.1 vs. uniprot
Match: A0A7S0YYL7_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0YYL7_9CRYP) HSP 1 Score: 140 bits (353), Expect = 1.850e-38 Identity = 74/136 (54.41%), Postives = 92/136 (67.65%), Query Frame = 1
Query: 1 MSTSLDAVDLGSNTAQDVSAGQSHTCVLLTSGNVTCFGYNYYGQLGLGDRTTRGLSPSDMGENLGLVNLGSNRTASRIGCGQHHTCAVLDDASLKCWGINNKGMLGLGDTKNRGDEDIELGDNLPTVDLGTGKGVC 408
M +L VD+G + + +S GQ HTCV+L G+V C+GYN+ GQLG+GDR TRG S MG L V LGS RTA + G HTCA+LDD ++KCWG N G LGLGDT NRGD + +GD LP+VDLG G+ V
Sbjct: 2 MGDALPVVDVGGSVSS-ISVGQLHTCVVLVGGSVKCWGYNHRGQLGVGDRMTRGDSNGQMGAALPSVYLGSGRTAVSVSVGNSHTCAMLDDQTVKCWGENTFGQLGLGDTVNRGDGNGAMGDALPSVDLG-GRAVA 135
BLAST of mRNA_H-elongata_contig72969.14975.1 vs. uniprot
Match: UPI001056704E (hypothetical protein n=1 Tax=Legionella yabuuchiae TaxID=376727 RepID=UPI001056704E) HSP 1 Score: 145 bits (366), Expect = 3.000e-38 Identity = 74/134 (55.22%), Postives = 94/134 (70.15%), Query Frame = 1
Query: 1 MSTSLDAVDLGSN-TAQDVSAGQSHTCVLLTSGNVTCFGYNYYGQLGLGDRTTRGLSPSDMGENLGLVNLGSNRTASRIGCGQHHTCAVLDDASLKCWGINNKGMLGLGDTKNRGDEDIELGDNLPTVDLGTGK 399
M +L AVDLG+ TA+ ++AG C LL + V C+G N GQLGLGD T RG +MG+NL VNLG+ +TA ++ G H CA+L+D SLKCWG+N+ G LGLGDT NRGD E+GDNLPTV+LGTG+
Sbjct: 336 MGDNLPAVDLGTGRTAKQLTAGGGFNCTLLDNDTVKCWGRNTSGQLGLGDTTNRGDGAGEMGDNLPAVNLGTGKTAIKLRAGDAHACAILNDNSLKCWGLNDSGQLGLGDTINRGDGPGEMGDNLPTVNLGTGR 469
BLAST of mRNA_H-elongata_contig72969.14975.1 vs. uniprot
Match: A0A7C7JGX1_9FLAO (Uncharacterized protein n=1 Tax=Flavobacteriales bacterium TaxID=2021391 RepID=A0A7C7JGX1_9FLAO) HSP 1 Score: 140 bits (354), Expect = 6.810e-38 Identity = 66/131 (50.38%), Postives = 95/131 (72.52%), Query Frame = 1
Query: 1 MSTSLDAVDLGSN-TAQDVSAGQSHTCVLLTSGNVTCFGYNYYGQLGLGDRTTRGLSPSDMGENLGLVNLGSNRTASRIGCGQHHTCAVLDDASLKCWGINNKGMLGLGDTKNRGDEDIELGDNLPTVDLG 390
M +L ++LG N TA+ ++AG+SHTC LL + + C+G+N YGQLG GD T+RG P +MG+NL +NLG N TA+ I G++HTCA+ D+ ++KCWG+N+ G LGLGDT RGD + ++GD L ++LG
Sbjct: 37 MGVNLQHIELGGNHTAKSIAAGESHTCALLDNNKIKCWGWNDYGQLGQGDTTSRGDGPGEMGDNLNPINLGENLTATSIVAGEYHTCALFDNNTIKCWGLNDFGQLGLGDTTFRGDGNGKMGDKLNPINLG 167 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig72969.14975.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig72969.14975.1 >prot_H-elongata_contig72969.14975.1 ID=prot_H-elongata_contig72969.14975.1|Name=mRNA_H-elongata_contig72969.14975.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=145bp MSTSLDAVDLGSNTAQDVSAGQSHTCVLLTSGNVTCFGYNYYGQLGLGDRback to top mRNA from alignment at H-elongata_contig72969:924..1881- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig72969.14975.1 ID=mRNA_H-elongata_contig72969.14975.1|Name=mRNA_H-elongata_contig72969.14975.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=958bp|location=Sequence derived from alignment at H-elongata_contig72969:924..1881- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig72969:924..1881- >mRNA_H-elongata_contig72969.14975.1 ID=mRNA_H-elongata_contig72969.14975.1|Name=mRNA_H-elongata_contig72969.14975.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=870bp|location=Sequence derived from alignment at H-elongata_contig72969:924..1881- (Himanthalia elongata Himel1 dioecious)back to top |