mRNA_H-elongata_contig7252.14920.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig7252.14920.1 vs. uniprot
Match: D7FLB1_ECTSI (Ankyrin Repeat Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLB1_ECTSI) HSP 1 Score: 338 bits (867), Expect = 2.080e-96 Identity = 260/721 (36.06%), Postives = 363/721 (50.35%), Query Frame = 1
Query: 4 ISVADNPFIPGMMLSLALAMEAPTAKEDQRRKLTELQEMLEELLLEVLERLPQTVLGFPGGAAACSRLLEPETTGTRSAAFKGPLKMALSTHHLTITFCTQPLIVDFISYTFGAGLLNLR---------------AR------------IPLDKKNPKMAAG---------------------------VLKKIDPAMIAKHNPAAGLQRNRT--TIFPGAQFILVGLVAMPFTYYRVPLLRMWLDLAVFLVFLAVYTIVVAKMYDNALPNTP-EIALGFYLIVSVLLNLASRVVRLRQNVITEASAVGRSNREYFRDSWNWLDIPAISLLSAGFLLRLWSSTGGDDMGHVGEAFYLLAAPLLFPRILFFAQIHPSQGALIQVMMRMVNKVLQFAIVMIIVMMGFAVSFWASSERYSFGEDDDDPITFSVMWVAVFKAMLGDFGDVESL-NEEPDWVDLVVFVFYLIVMTVMLLNLLIAILSTTHANIEERAEAEIKASKVRTMEHYRRVVANNVLPAPLNLIQLLALVPILMIDLSICRGLYGRLSPTIARSMGSFVFWATSSPVAIALNVLLSFVS---IPTMVNTK-WNQITSLPGNLS------RSVAVVFENLIVVPLALLWLWGVGVVNGARQIMDLAQGRRSAIPALVPLGFHLPQIPNNVGEILMKTEGGLSVHQLSVCLEDPMSDPEVRRDEENRPTTVKHIKLLRNRLEET 1962
++ +DNPF+PGM LS+A A A A E +RRKL LQE ++ LLLE+LERLPQTV GF GG CS + EPE + + GPL++AL TFCTQPL+ DF+S F GL LR AR + LD++ + G + + P ++ + AGL T PGAQF + GLV MP YYRVP +RM LDLAV+L L ++ VV D P TP E A FY++ + ITE + R Y D WN LD+ + L++ G ++R D G A Y L+APL+F R+LFFAQ+ G +IQV+ M ++++F +V+I+VM+GFA+SF A FG+ D TF + +FKAMLG+ S + D V +FV YL+V+ VMLLNLLIA+LST+H+ +E +A+ E K SK R +EHYR VV +LP P NL+QL+ +P+++ D R G S ++G FW PVA A +L +S P + +T +++ + G LS R + V F ++ PL L+ W + + R P + P +V ++L GGL L + LEDP+ DPEVR DE + TTV++IK LRNRLE+T
Sbjct: 569 VACSDNPFVPGMTLSIAFAKSASVAPEGERRKLLSLQERVDTLLLEILERLPQTVQGFDGGMTGCSAVFEPELSREDARGLPGPLRLALQERQHVQTFCTQPLLTDFLSRRFTYGLPGLRDTQNILGDRRELTNLARGGPGELMSGQKYLALDEEGRRKEDGRSLDRCLLLDLQDKIGQEGKLLDSRKIIDTLLSPCILLQGANCAGLWNTAVSLTFLPGAQFTIAGLVGMPDQYYRVPAMRMLLDLAVYLGMLVFFSTVVLFHEDG--PLTPGEAAFAFYILAGI---------------ITEGQEMRRDFGLYAADHWNILDLLGLGLVTGGLIVRC-----ADGDNSWGRALYALSAPLIFSRLLFFAQMLRFHGPMIQVVFSMTAELVKFGVVIIVVMLGFAMSFHAL-----FGDVD----TFGGTCLTLFKAMLGEVDFFGSFPGNQYDSVATALFVIYLVVIAVMLLNLLIAVLSTSHSKVEGKADQEFKVSKARIIEHYRMVVDMCLLPPPFNLVQLILSLPVMVRD----RSGQGTASTRAQEAVGRMAFWLALGPVAAACGTVLWVLSSLFAPFVWHTHFYSKAQARRGALSVGSLLVRYLIVFFWCVLGAPLYLMAFWLTAPMKWLKLRPWCWVWDRRQAPYIASWN------PKSVNDLLEGNSGGLVAGDLQMYLEDPIGDPEVRPDERRKQTTVENIKQLRNRLEKT 1248
BLAST of mRNA_H-elongata_contig7252.14920.1 vs. uniprot
Match: A0A6H5LDE6_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LDE6_9PHAE) HSP 1 Score: 327 bits (837), Expect = 2.000e-91 Identity = 245/734 (33.38%), Postives = 359/734 (48.91%), Query Frame = 1
Query: 1 AISVADNPFIPGMMLSLALAMEAPTAKEDQRRKLTELQEMLEELLLEVLERLPQTVLGFPGGAAACSRLLEPETTGTRSAAFKGPLKMALSTHHLTITFCTQPLIVDFISYTFGAGLLNLRAR--IPLDKKN---PKMAAGVLK--KIDPAMIAKHNPAAGLQRNRTTIFPGAQFILVGLVAMPFTYYRVPLLRMWLDLAVFLVFLAVYTIVVAKMYDNALPNTPEIALGFYLIVSVLLNLASRVVRLRQNVITEASAVGRSNREYFRDSWNWLDIPAISLLSAGFLLRLWSSTGGDDMGHVGEAFYLLAAPLLFPRILFFAQIHPSQGALIQVMMRMVNKVLQFAIVMIIVMMGFAVSFWAS-SERYSFGEDDDDPITFSVMWVAVFKAMLGDFGDVESLNEEP-DWVDLVVFVFYLIVMTVMLLNLLIAILSTTHANIEERAEAEIKASKVRTMEHYRRVVANNVLPAPLNLIQLLALVPILMIDL---------------------------------------------SICRGLYGRLSPTIARSMGSFVFWATSSPVAIALNVLLSFVSIPTMVNTKWNQI--TSLPGNLSRSVAVVFENLIVVPLALLWLWGVGVVNGARQIMDL-----------------AQGRRSAI-------PALVPLGFHLPQIPNNVGEILMKTEGGLSVHQLSVCLEDPMSDPEVRRDEENRPTTVKHIKLLRNRLEET 1962
AIS A+NPFIPGM LS+A A E ++R+L +Q ++ELLLEVLE +PQTV GF G CS + EPET +R ++GPL + LS T+CT PL++DF++ F GL +LR + L K G+L K+ +A AG + T FPGA+FI+ G ++ P +YY+VP LRM LDL ++ + ++ V + EI Y+ +L TE + EY RD WN LD+ +++LL G + R++ + A Y L+APL F RILFFAQI PSQG +IQVM M + +F ++M++VM+GF SF++ E ++GE +W A+F+A LG+ ++ + D V V+ V YL+++T+M+LNLL+A+LST HA ++ A E K ++ R ++HY VV + LP P NL Q + +P +++DL + RG +GRL+ FWA P+A+ +L +SI W SL G ++R + V+F + P L +W G V G R+ M GR + PA + + V +L + +G L+ +L + L+DPMSDP+VRRDEE R TTV+HIKLLRNRLE T
Sbjct: 933 AISSANNPFIPGMNLSVACTTATRRAMEGEKRRLASMQAAVDELLLEVLEHMPQTVKGFKGEMRDCSAIFEPETVISRFHGYQGPLHVVLSKREQMETYCTIPLVLDFMTRKFTKGLPSLRDTEGVLLSNKGFTQTLYGGGLLAEGKVFFFGMALQRGYAGGALSSITYFPGARFIIAGFLSRPGSYYKVPALRMCLDLVTYISMMIIFGGFVILHEAGDTSDWLEIVFTMYIFGGIL---------------TEFREILEDPWEYMRDQWNLLDVTSLTLLLGGAIQRMYGQVDDES----SRALYALSAPLAFARILFFAQILPSQGPMIQVMFSMTGLLAKFGMIMLLVMLGFVTSFYSLYKETTAYGE----------VWKAIFRATLGETDYLDDFSGTTFDGVATVLLVVYLVLLTIMMLNLLVAVLSTAHAKVDANAGLEYKVTRARLIQHYVNVVEIDRLPPPFNLFQWIFALPFMVLDLCFRTSRRPSTASTNSAXXXXXXXXXXXXXXSINGNEKTKRDRSYFKVARGFFGRLA-----------FWAMLGPIAVLAGWVLWMISIVKAPVVVWQTSGDKSLGGRIARMLLVIFVCAVGAPFWHLVMWVRGGVAGVRRTMRALGCXXXXXXXXXXXXKRGDGRTTTASITARGSPATIVAEGAEDDMEKVVPIVLQEADGALTTSELQIFLDDPMSDPDVRRDEETRATTVEHIKLLRNRLEAT 1626
BLAST of mRNA_H-elongata_contig7252.14920.1 vs. uniprot
Match: D8LT30_ECTSI (Ankyrin Repeat Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT30_ECTSI) HSP 1 Score: 282 bits (721), Expect = 1.490e-76 Identity = 221/689 (32.08%), Postives = 317/689 (46.01%), Query Frame = 1
Query: 1 AISVADNPFIPGMMLSLALAMEAPTAKEDQRRKLTELQEMLEELLLEVLERLPQTVLGFPGGAAACSRLLEPETTGTRSAAFKGPLKMALSTHHLTITFCTQPLIVDFISYTFGAGLLNLRARIPLDKKNPKMAAGVLKKIDPAMIAK----------HNPAAGLQRNRTTIFPGAQFILVGLVAMPFTYYRVPLLRMWLDLAVFLVFLAVYTIVVAKMYDNALPNTPEIALGFYLIVSVLLNLASRVVRLRQNVITEASAVGRSNREYFRDSWNWLDIPAISLLSAGFLLRLWSSTGGDDMGHVGEAFYLLAAPLLFPRILFFAQIHPSQGALIQVMMRMVNKVLQFAIVMIIVMMGFAVSFWASSERYSFGEDDDDPITFSVMWVAVFKAMLGDFGDVESLNEEP-DWVDLVVFVFYLIVMTVMLLNLLIAILSTTHANIEERAEAEIKASKVRTMEHYRRVVANNVLPAPLNLIQLLALVPILMIDLSICRGLYGRLSPTIARSMGSFVFWATSSPVAIALNVLLSFVSIPTMVNTKWNQITSLPGNLSRSVAVVFENLIVVPLALLWLWGVGVVNGARQIMDLAQ----------------GRRSAIPALVPLGFHLPQIPNN--------VGEILMKTEGGLSVHQLSVCLEDPMSDPEVRRDEENRPTTVKHIKLLRNRLEET 1962
AIS ADNPFIPGM LS+A M A E ++R+L +Q ++ELLLEVLE +PQTV GF G CS + EPET +R ++GPL + LS T+CT PL++DF+S F GL +LR + N ++A+ AG + T FPGA+FI+ GL++ P +YY+VP LRM LDL +++ + ++ V + EI Y+ +L TE + EY RD WN LD+ +++LL G + R++ DD A Y L+APL F RILFF QI PSQG +IQVM M + +F ++M++VM+GF SF++ + + T+ V+W A+F+A LG+ + + D V + V YL+++T+M+LNLL+A+LST HA ++ A E KA P+ V W TS S G ++R + V+F + P L +W G V G R+ M G R+ ++ GF + V +L + +G L+ +L + L+DPMSDP VRRDEE R TTV+HIKLLRNRLE T
Sbjct: 685 AISSADNPFIPGMNLSVACTMATRRAMEGEKRRLASMQAAIDELLLEVLEHMPQTVKGFKGEMRDCSAIFEPETVISRFHGYQGPLHVVLSKRQQMETYCTIPLVLDFMSRKFTKGLPSLRDTEGVLLNNTSFTEPGQTLYGDGLLAEGRVFFFGMALQRSYAGGTLSSITYFPGARFIIAGLLSRPGSYYKVPALRMCLDLVTYILMMIIFGGFVILHDAGDTFDWMEIVFTMYIFGGIL---------------TEFREILDDPWEYMRDQWNLLDVASLTLLLGGVIQRMYGQV--DDQSS--RALYALSAPLAFARILFFVQILPSQGPIIQVMFSMTGLLAKFGMIMLLVMLGFVTSFYSLYKETT---------TYGVVWKAIFRATLGETDYFDDFSGTTFDGVATALLVVYLVLLTIMMLNLLVAVLSTAHAKVDADAGLEYKA-------------------------------PV--------------------------VVWQTSGD-------------------------KSRGGRIARMLLVIFACAVGAPFWHLVMWVRGGVAGVRRTMRALGCCXXXXXXXXGGAKRVGGRTPTASMTVRGFPATTVAEGAEHDMEKVVPIVLQEADGALATSELQIFLDDPMSDPAVRRDEETRATTVEHIKLLRNRLEAT 1263
BLAST of mRNA_H-elongata_contig7252.14920.1 vs. uniprot
Match: D7FMG5_ECTSI (Transient receptor potential channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMG5_ECTSI) HSP 1 Score: 275 bits (704), Expect = 2.600e-75 Identity = 253/828 (30.56%), Postives = 376/828 (45.41%), Query Frame = 1
Query: 4 ISVADNPFIPGMMLSLALAMEAPTAKEDQRRKLTELQEMLEELLLEVLERLPQTVLGFPGGAAACSRLLEPETTGT-RSAAFKGPLKMALSTHHLTITFCTQPLIVDFISYTFGAGLLNL-------------RARIPLDKKNPKMAA----------------------------GVLKKIDPAMIAKHNPAAGLQRNRT--------------------------------------------------TIFPGAQFILVGLVAMPFTYYRVPLLRMWLDLAVFLVFLAVYTIVVAKMYDNALPNTPEIALGFYLIVSVLLNLASRVVRLRQNVITEASAVGRSNREYFRDSWNWLDIPAISLLSAGFLLRLWSSTGGDDMGHVGEAFYLLAAPLLFPRILFFAQIHPSQGALIQVMMRMVNKVLQFAIVMIIVMMGFAVSFWAS-SERYSFGEDDDDPITFSVMWVAVFKAMLGDFGDVESLNEEPDWVDL--VVFVFYLIVMTVMLLNLLIAILSTTHANIEERAEAEIKASKVRTMEHYRRVVANNVLPAPLNLIQLLALVPILMIDLSICRGLYGRLS----PTIARSMGSFVFWATSSPVAIALNVLLSFVSIPTMVNTKWNQITSLPGNLSRSVA----VVFENLIVVPLALLWLW---GVGVVNGARQIMDLAQGRRSAIPALVPLGFHLPQIPNNVGEILMKTEG---------------------------GLSVHQLSVCLEDP-MSDPEVR-RDEENRPTTVKHIKLLRNRLEETEANRLVDVVSRLENALHAREGRLEDIVSAAITSAVDERVG 2082
+S DNPFIPG+ LS+AL A E + R L LQ+ +++LL VL+RLPQT+ FPGG C +LEPE G R F+GPL++AL + T C PL+ ++ Y F AGL +L R R + P A +G +R R T PGAQF+LVG++ P YY+VP++RM L V L+ LA+YT V + D L NT EIAL F+++ ++ NL +++R + E++RD WNWL+ ++ LL+ G +R+ +S D+ H G A + L+APL+F R+LFF Q QG +IQ+M + ++LQFA+V+ +MMGF VSF+A E S+G+ +W+ VFKAMLG+ + E+ + D+ V+ V YL V+ VMLLNLLIA+LST HA ++E+ + + SKVR M+ Y R+V ++VLP+P NL P + + L + RG+ G L P I R VFW T AI + L S P V T W + T +L+ +VA VV ++ +P L W W G+G+ A + LA G +P+ P+ G T G G SV ++ LE+P M D + + E+N+ T++ I RN L+E R V++ L++ + ++ ++ + S RVG
Sbjct: 218 LSFVDNPFIPGLSLSVALEESLKNAPERESRCLEALQKAMDDLLRAVLDRLPQTIASFPGGVGGCESVLEPEVAGVLRDRDFRGPLRLALQERQFSKTLCIAPLMFKYMCYRFVAGLPDLQDSNDLLGGREEKRTRTSFETSGPVRAPVASAASAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPSGTRRGRKGRDFLYSDGFVAGSATERLLQGLGWTGRRAAAALTPPPERPSDWETIFSGTFLPGAQFVLVGILTKPLAYYKVPVMRMLLGFYVHLITLALYTAVALESDDGELSNT-EIALTFHVMAEIVSNL----LQMRAGFV-----------EFWRDKWNWLESLSLLLLAGGLTIRIRNS----DV-HQGRALFALSAPLVFSRVLFFGQFLKRQGLVIQMMTILFGEMLQFALVLGTIMMGFTVSFYALFEEAKSYGD----------VWLDVFKAMLGEVSVFSEIYEDSVYRDVARVLLVVYLTVVAVMLLNLLIAVLSTEHAKVDEQQDIAFRESKVRIMKLYVRIVDSDVLPSPFNL-------PQIAVGL-VARGVDGLLGTKTCPKIMREFSVGVFWLTLGSPAILIAWGLWAASAPMAVLTAWRRATYTGRSLTVAVACSSVVVVLHVFALPFVLSWFWVRSGLGLA--ALTLKTLAAALCGGNGGEDGSGRRVPRRPSAAGSGGASTAGSPSACSDVIVADMLRRGNASPGGRHAAGSSVAEIWAQLENPTMPDGLAQGQGEQNQTVTLEEIIRARNHLDEAGRGRGEAVLALLKSVDADLKDQIAELERSVARSVESLRVG 1004
BLAST of mRNA_H-elongata_contig7252.14920.1 vs. uniprot
Match: A0A6H5KJG3_9PHAE (Ion_trans domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KJG3_9PHAE) HSP 1 Score: 263 bits (673), Expect = 1.820e-70 Identity = 252/791 (31.86%), Postives = 369/791 (46.65%), Query Frame = 1
Query: 1 AISVADNPFIPGMMLSLALAMEAPTAKEDQRRKLTELQEMLEELLLEVLERLPQTVLGFPGGAAACSRLLEPETTGTRSAAFKGPLKMALSTHHLTITFCTQPLIVDFISYTFGAGLLNLR-ARIPLDKKNP--KMAAGVLK-------------------------KID----------------------PAMIAKHNPAAGLQRNRT------------TIFPGAQFILVGLVAMPFTYYRVPLLRMWLDLAVFL---VFLAVYTIVVAKMYDNALPNTPEIALGFYLIVSVLLNLASRVVRLRQNVITEASAVGRSNREYFRDSWNWLDIPAISLLSAGFLLRLWSSTGGDDMGHVGEAFYLLAAPLLFPRILFFAQIHPSQGALIQ-----------VMMRMVNKVLQFAIVMIIVMMGFAVSFWASSERY-SFGEDDDDPITFSVMWVAVFKAMLGDFGDVESLNEEP-DWVDLVVFVFYLIVMTVMLLNLLIAILSTTHANIEERAEAEIKASKVRTMEHYRRVVANNVLPAPLNLIQLLALVPILMIDLSIC---RGLYGRLSPTIARS----------MGSFVFWATSSPVAIALNVLLSFVSI-PTMV-----NTKWNQITSLPGNLSRSVAV--VFENLIVV---------PLALLWLWGVGVVNGARQIMD----------LAQGRRSAIPALVPLGFHLPQIPNNVGEILMKTEGGLSVHQLSVCLEDPMSDPEVRRDEENRPTTVKHIKLLRNRLEETEANRLVDVVSRLENALHAR 2019
A++ A NPFIPG++LS+ LA A A E +RR +T++QE + LLLEVLERLP++V F C + EP+ F+ PL+M LS FC PL++DF+ F L LR + L N ++ G +K +ID P + + A + R T FPGAQ I+ GL A P Y+RVP +RM LDL V++ V L+ + + ++ + + + + + F + A + + V E + R+ Y D WN LD+ ++ L+ G + R+ D +G AFY LAAPLL R LFF QIHP QG +IQ V+ RM +L+F VM ++++GF ++F + SFGE ++ +FKAMLGD + + + D V + V YL ++TVMLLNLL+AILST+HA + E E E K S R M+HY+ VV N++LP P NL+QL+ PI C G+ G T RS +G VFW PVA+ LL S+ P M + N+ + G+ RS+ + +F +V+ P+ LL LW +N +R+++ A+ R A + + +L+K+ GG+ +L L+DPM D +VR+DE++R TTV+HIKLLRNRLE T +L LE ALH R
Sbjct: 486 AVTSAANPFIPGLVLSIRLAEAAEKANEGERRAITDIQESVNALLLEVLERLPRSVRSFERDMDDCRDMFEPKFLDVFED-FEKPLEMMLSRQQQRELFCNVPLVMDFLKRKFTLSLPRLRDPKEVLADSNEILHLSRGGVKGDVCLVLDWGVDVDVQKEDGHLNDEQIDXXXXXXXXQADDHASLRPPWKHPTLFGSKSLLASFRSPRALLQGANDRFPSLTPFPGAQVIVAGLAARPNDYFRVPAMRMVLDLVVYIGMIVALSTFVLFHSQAEKSYVEGSTDEQVVFRTLDWPEATCAK--IFIVGGVFQEGREMARNFGRYCEDQWNALDLLSLLFLTIGLVGRV-----VDWKSQLGPAFYALAAPLLVSRALFFVQIHPLQGPMIQASGETKRFPQRVVFRMTRILLKFGFVMAVIVLGFTMAFHVLFRDFDSFGES----------FLDLFKAMLGDTDFFKVFSGDTYDVVATFLLVVYLFIVTVMLLNLLVAILSTSHAQVAENIEREFKVSIARMMDHYQLVVTNDMLPTPFNLLQLIVW-PIAWCLHGCCGRNSGVSGNTQQTRNRSKEAYACGSKAIGPVVFWVVLGPVAVIGGSLLWMGSVLPAMYFWRKHHRLQNKRDNGGGDSKRSMHLWSLFLRYVVIIPCWCVFGAPVYLLLLW----LNASRRVLSRCPCNDDTRSTAKSRHGASKSTIE-------------SMLLKSPGGVGAQKLREFLDDPMDDKDVRQDEKDRRTTVEHIKLLRNRLENTSKEQLKG----LEEALHQR 1236
BLAST of mRNA_H-elongata_contig7252.14920.1 vs. uniprot
Match: A0A6H5JG42_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG42_9PHAE) HSP 1 Score: 259 bits (662), Expect = 1.220e-69 Identity = 234/762 (30.71%), Postives = 363/762 (47.64%), Query Frame = 1
Query: 1 AISVADNPFIPGMMLSLALAMEAPTAKEDQRRKLTELQEMLEELLLEVLERLPQTVLGFPGGAAACSRLLEPETTGTRSAAFKGPLKMALSTHHLTITFCTQPLIVDFISYTFGAGLLNLRAR-----------------------------IPL----------------------DKKNPKMAAGVLKK---IDPAMIAKH-------NPAAGLQRNRT-----TIFPGAQFILVGLVAMPFTYYRVPLLRMWLDLAVFL---VFLAVYTIVVAKMYDNALPNTPEIALGFYLIVSVLLNLASRVVRLRQNVITEASAVGRSNREYFRDSWNWLDIPAISLLSAGFLLRLWSSTGGDDMGHVGEAFYLLAAPLLFPRILFFAQIHPSQGALIQVMMRMVNKVLQFAIVMIIVMMGFAVSFWASSERY-SFGEDDDDPITFSVMWVAVFKAMLGDFGDVESLNEEP-DWVDLVVFVFYLIVMTVMLLNLLIAILSTTHANIEERAEAEIKASKVRTMEHYRRVVANNVLPAPLNLIQLLALVPILMIDLSIC-RGLYGRLSPTIA------------RSMGSFVFWATSSPVAIALNVLLSFVSIPTMVNTKWNQITSLPGNLSRS--VAVVFENLIVVPLALLWLWGVGVVNGARQIMDLAQGRRSAIPALVPLGFHLPQIPN---NVGEILMKTEGGLSVHQLSVCLEDPMSDPEVRRDEENRPTTVKHIKLLRNRLEETEANRLVDVVSRLENALHAR 2019
A++ A NPFIPG++LS+ LA A E ++R +T++ + +LLLE+LE LP++V F A + EP + ++ F+ P++M LS T FC+ PL++DFI F GL ++R + +P+ DKK + G L P ++ + +P A LQ T FP AQFI+ GL A Y+RVP++RM LDL V+L V L+ + + ++ + + + + + F + A+ V+ + E + R+ Y D WN LD+ + + GF+ R+ D +G AFY L+APLL R LFF QIHP QG + V+ RM +L+F VM +VM+GF ++F + SFGE ++ +FKAM G+ + + + D V ++ V YL ++T++LLNLL+AILST+H+ +++ + E KAS R M+HY+ VV N++LPAP NL+QL+ PI C R G S +++G VFW PVA+ LL VS P V W + G+ R +++ ++P LW + ++ L RR + + + + IL++ GG+ +L L+DPM D +VR+DE ++ TTV+H+KLLRNRLE T + D + LENALH R
Sbjct: 304 AVASASNPFIPGLVLSIRLAEAAEKTNEGEQRAITDVHARVNDLLLEILEGLPRSVRSFERDMDASGDMFEPASLPSKD--FETPMEMILSRRQQTEIFCSAPLVMDFIKRKFTLGLPSMRDKKEILADSKEIFHLSGGDVRGNVCLVLGTFVPITVVDADVRREDGPFIDLKAEDMDKKAARADHGQLSAQAWAHPTLLGSNCLLASFRSPRALLQGANDRLPCLTPFPAAQFIVAGLAARSNDYFRVPVMRMVLDLVVYLGVLVALSTFVLFRSQAEQSRVDGSADEEIVFRKLNWSEATCATAVIA--GGMYREWFEMARNYGRYLEDQWNALDLLGLLFFTIGFIARV-----VDWTQQLGPAFYALSAPLLVSRALFFVQIHPLQGPM--VIFRMTTVLLKFGFVMAVVMIGFTMAFHVLFRDFDSFGES----------FLELFKAMFGETTFFNAFSGDTYDAVATMLLVVYLSIVTILLLNLLVAILSTSHSKVQKNIDREFKASIARMMDHYQLVVTNDILPAPFNLLQLVVW-PIAWCVGGCCGRSTSGSQSTRQELNRGREAYERGNKAIGPVVFWVVLGPVAVVGGTLLWIVSTPLSVYL-WRK-HHREGDRKRLSLISLGCRYFFIIP-----LWCILGAPVYLFVLWLGASRRLLCRCNYDVSIAHAESGHFRCTIESILLEGPGGVGAKKLREFLDDPMDDKDVRQDERDKRTTVEHVKLLRNRLENT----IQDELRGLENALHKR 1032
BLAST of mRNA_H-elongata_contig7252.14920.1 vs. uniprot
Match: D7FR83_ECTSI (Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR83_ECTSI) HSP 1 Score: 249 bits (636), Expect = 3.210e-66 Identity = 207/620 (33.39%), Postives = 309/620 (49.84%), Query Frame = 1
Query: 1 AISVADNPFIPGMMLSLAL--AMEAPTAKEDQRRKLTELQEMLEELLLEVLERLPQTVLGFPGGAAACSRLLEPETTGTRSA-AFKGPLKMALSTHHLTITFCTQPLIVDFISYTFGAGLLNLR--------ARIPLDKKNPKMAAGVLKKIDP-AMIAKHNPAAGL------QRNRTTIFPGAQFILVGLVAMPFTYYRVPLLRMWLDLAVFLVFLAVYTIVVAKMYDNALPNTPEIALGFYLIVSVLLNLASRVVRLRQNVITEASAVGRSNREYFRDSWNWLDIPAISLLSAGFLLRLWSSTGGDDMGHVGEAFYLLAAPLLFPRILFFAQIHPSQGALIQVMMRMVNKVLQFAIVMIIVMMGFAVSFWASSERYSFGEDDDDPITFSVMWVAVFKAMLGDFGDVES-LNEEPDWVDLVVFVFYLIVMTVMLLNLLIAILSTTHANIEERAEAEIKASKVRTMEHYRRVVANNVLPAPLNLIQLLALVPILMIDLSICRGLYGRLSPTIARSMGSFVFWATSSPVAIALNVLLSFVSIPTMVNTKWNQIT-SLPGNLSRSVAVVFENLIVVPLALLWLWGVGVVNGARQIMDLA---QGRRSAIPALVPLGFHLPQI 1791
A++ A N FIP + LS A A+ + ++ D RR L LQ ++ +L E L RLPQ+V G GG AAC+ LLEPE S +GPL AL H +TF T PL ++F+ F GL L+ + LD + L + P +++ P G + T FPGA FI G+VA+P +YY+VPL+RM L+ +F LA +T V +++ E+A Y++ +++L EA+ + + Y D W A+ + A FL R D G Y + +PL++ R+L++AQ+ PSQG+ IQV+ M +++ QF +VM +V++GFA+SF+A GE T + F+AMLG+ G + + E+ D V+ V YL+VMT+MLLNLLIA+LST H +EE I+ S+ R HYR VVA + LPAP NL QL+ L+P M+D+ Y P R +G VFW P AI V + VS P + W + + S+ L R++ + + VPL L+ W V R + +G RS+ P + + L ++
Sbjct: 368 AVASAKNSFIPSLNLSFAFRDAIRSAASERD-RRVLARLQHDVDSILTETLNRLPQSVCGLSGGMAACTALLEPEVADDSSTYGERGPLARALGCTHRIVTFATTPLCMNFMLLKFTRGLPALKDGHSVLILEKSRLDIREEAKGHESLTALCPGSILGGFLPRVGKLLWDDDRLAPLTFFPGAHFIATGVVALPNSYYKVPLMRMALEAMIFTAALAFFTSRVL-LFEKGQLTIAEVAFAIYVVAAIML---------------EATEMWKDLAGYLLDRWKAPHFLALVVALAAFLAR-----AIDPDSSWGRGLYAVGSPLMYWRLLYYAQVIPSQGSTIQVLYGMASELGQFFVVMGVVILGFAMSFFALFRDVK-GE------TIRGALLDAFQAMLGEVGLFDDFVGEKHDLAATVLLVSYLVVMTIMLLNLLIAVLSTAHGKVEEAVL--IRVSRARVYTHYRWVVATDALPAPFNLAQLVVLLPCKMVDVLFKGNTY----PIARRGVGRIVFWLLLGPGAILGGVFVWLVSTPKALFAIWGKRSLSIASRLGRTMLCLLWITLGVPLCLVVSW---VTQATRVLFGRTFGLEGARSSGPIIYTVDDMLREV 949
BLAST of mRNA_H-elongata_contig7252.14920.1 vs. uniprot
Match: A0A6H5JMG8_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMG8_9PHAE) HSP 1 Score: 248 bits (633), Expect = 1.570e-65 Identity = 195/542 (35.98%), Postives = 279/542 (51.48%), Query Frame = 1
Query: 1 AISVADNPFIPGMMLSLAL--AMEAPTAKEDQRRKLTELQEMLEELLLEVLERLPQTVLGFPGGAAACSRLLEPETTGTRSA-AFKGPLKMALSTHHLTITFCTQPLIVDFISYTFGAGLLNLR--------ARIPLDKKNPKMAAGVLKKIDP-AMIAKHNPAAGL---QRNRT---TIFPGAQFILVGLVAMPFTYYRVPLLRMWLDLAVFLVFLAVYTIVVAKMYDNALPNTPEIALGFYLIVSVLLNLASRVVRLRQNVITEASAVGRSNREYFRDSWNWLDIPAISLLSAGFLLRLWSSTGGDDMGHVGEAFYLLAAPLLFPRILFFAQIHPSQGALIQVMMRMVNKVLQFAIVMIIVMMGFAVSFWASSERYSFGEDDDDPITFSVMWVAVFKAMLGDFGDVES-LNEEPDWVDLVVFVFYLIVMTVMLLNLLIAILSTTHANIEERAEAEIKASKVRTMEHYRRVVANNVLPAPLNLIQLLALVPILMIDLSICRGLYGRLSPTIARSMGSFVFWATSSPVAIALNVLLSFVSIP 1569
A++ A N FIP + LS A A+ + ++ D RR L LQ ++ +L E L+RLPQTV G GG AAC+ LLEPE S +GPL AL H +TF T PL ++F+ F GL L + LD + L + P +++ P G + +R T FPGA FI G+VA+P +YY+VPL+RM LD VF LA +T V +++ E+A Y++ +++L EA+ + + Y D W A+ + A FL R D G Y + +PL++ R+L++AQ+ PSQG+ IQV+ M +++ QF +VM +V++GFA+SF+A GE T + F+AMLG+ G + + E+ D V+ V YL+VMT+MLLNLLIA+LST H +EE I+ S+ R HYR VVA + LPAP NL QL+ L+P M+DL Y P R +G VFW P AI + + VS P
Sbjct: 459 AVASAKNSFIPSLNLSFAFRDAIRSAASERD-RRVLARLQHDVDSILTETLDRLPQTVCGLSGGMAACTALLEPEEADDSSTYGERGPLARALGCPHRIVTFATTPLCMNFMLLKFTRGLPALNDGHSVLILEKSRLDVREEAKGHESLTALCPGSILGGFLPRVGKLLWEDDRLAPLTFFPGAHFIATGVVALPNSYYKVPLMRMALDATVFTAALAFFTSRVL-LFEKGSLTIAEMAFAIYVVAAIML---------------EATEMWKDLAGYLLDRWKAPHFLALVVALAAFLAR-----AIDSDSSWGRGLYAVGSPLMYWRLLYYAQVIPSQGSTIQVLYSMASELGQFFVVMGVVILGFAMSFFALFRDVK-GE------TLRGALLDAFQAMLGEVGLFDDFVGEKHDLAATVLLVSYLLVMTIMLLNLLIAVLSTAHGKVEEAVL--IRVSRARVYTHYRWVVATDALPAPFNLAQLVVLLPCQMVDLLFKSNTY----PIARRGVGRIVFWLVLGPGAILGGIFVWLVSTP 965
BLAST of mRNA_H-elongata_contig7252.14920.1 vs. uniprot
Match: D7FZR6_ECTSI (Ankyrin Repeat Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZR6_ECTSI) HSP 1 Score: 245 bits (625), Expect = 3.910e-64 Identity = 198/571 (34.68%), Postives = 281/571 (49.21%), Query Frame = 1
Query: 1 AISVADNPFIPGMMLSLALAMEAPTAKEDQRRKLTELQEMLEELLLEVLERLPQTVLGFP--GGAAACSRLLEPETTGTRSAA--FKGPLKMALSTHHLTITFCTQPLIVDFISYTFGAGLLNLRARIPLDKKNPKM----------------AAGVLKKIDPAMIAKHNPAAGLQRNRTTIFPGAQFILVGLVAMPFTYYRVPLLRMWLDLAVFLVFLAVYTIVVAKMYDNALPNTPEIALGFYLIVSVLLNL---ASRVVRLRQNVITEASAVGRSNREYFRDSWNWLDIPAISLLSAGFLLRL--WSSTGGDDMGHVGEAFYLLAAPLLFPRILFFAQIHPSQGALIQVMMRMVNKVLQFAIVMIIVMMGFAVSFWASSERYSFGEDDDDPITFSVMWVAVFKAMLGDFGDVESLNE-EPDWVDLVVFVFYLIVMTVMLLNLLIAILSTTHANIEERAEAEIKASKVRTMEHYRRVVANNVLPAPLNLIQLLALVPILMIDLSICRGL----------------YGRL------------SPTIARSMGSFVFWATSSPVAIALNVLL 1551
A++ A NPFIPG+ LS+ L A A E +RR L E + ++E+LLE+ ERLPQTV GF G +C+ +LEPE +S + GPL M +S TFC PLI+DF+S F GL +L L K ++ G+ + A++ T PGAQFI+ +VA P YY VP +RM LD V++ +A + V ++ + + P G I +L A ++ + E + R R YF+D WN LD + L G ++R W+ST G AFY L+APL+ R+LFFAQI QG ++QV+ RM +LQF VM++VM+GF ++ F + +D F + +FKAMLG+ G + + D V ++ V YL ++TVMLLNLLIAILST HA ++E K SK R + HYR VV N+VLPAP NL+QLL + ++ + C L +GRL R+ G V+W PVA+A +L
Sbjct: 529 AVTSAANPFIPGVTLSIRLTEAAKQASEGERRALFETKSSIDEMLLEMFERLPQTVRGFEEQAGTDSCTNVLEPELMRAQSGSNDLGGPLDMIISDPLQLETFCKVPLIMDFLSSKFTLGLPDLMDTAGLLKNEHQLWYLEEDGLFRDEHGLGLDGIPVALLEALLKGVRQGIWDNTPTLTFLPGAQFIVAAMVAAPTKYYEVPAMRMLLDFVVYVGMVAALSYFV--LFHSTTGSDP----GLDGIADHRFSLSEGACALIFITAGAYREGREMKRGIRAYFKDQWNVLDALGMLFLFVGLVIRWDDWTSTWGP-------AFYALSAPLVVARVLFFAQILQFQGPMVQVIFRMTATLLQFGAVMLVVMIGFTMAL-----HVIFRDVED----FGDTLLGLFKAMLGETGFFDEFSGGRYDPVATILVVVYLFIVTVMLLNLLIAILSTEHAQVQENTGGAFKVSKARIIAHYRTVVDNDVLPAPFNLVQLLLSLGVIAMTFPYCFLLEAKREQSETERPAIDEHGRLFWGNVWEGARQRHRGARRAFGQLVWWLVLGPVAVAGGAIL 1077
BLAST of mRNA_H-elongata_contig7252.14920.1 vs. uniprot
Match: A0A6H5KBU4_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBU4_9PHAE) HSP 1 Score: 243 bits (619), Expect = 2.850e-63 Identity = 193/507 (38.07%), Postives = 269/507 (53.06%), Query Frame = 1
Query: 1 AISVADNPFIPGMMLSLALAMEAPTAKEDQRRKLTELQEMLEELLLEVLERLPQTVLGFP--GGAAACSRLLEPE----TTGTRSAAFKGPLKMALSTHHLTITFCTQPLIVDFISYTFGAGLLNLRARIPLDKKNPKM----AAGVLKK--------IDPAMIAK--HNPAAGLQRNRT--TIFPGAQFILVGLVAMPFTYYRVPLLRMWLDLAVFLVFLAVYTIVVAKMYDNALPNTPEIALGFYLIVSVLLNL---ASRVVRLRQNVITEASAVGRSNREYFRDSWNWLDIPAISLLSAGFLLRL--WSSTGGDDMGHVGEAFYLLAAPLLFPRILFFAQIHPSQGALIQVMMRMVNKVLQFAIVMIIVMMGFAVSFWASSERYSFGEDDDDPITFSVMWVAVFKAMLGDFGDVESLNE-EPDWVDLVVFVFYLIVMTVMLLNLLIAILSTTHANIEERAEAEIKASKVRTMEHYRRVVANNVLPAPLNLIQLLALVPILMIDL 1437
A++ A NPF+PG+ LS+ L+ A A E +RR L + + ++ELLLE+ ERLPQTV GF G +C+ +LEPE TTG+ GPL M +S TFC PLI+DF+S F GL +L L K + G+ + I A++A G+ N T PG QFI+ +VA P YY VP +RM LD V++ +AV + V +T E G IV+ L+L A ++ + E + R R YF+D WN LD I L G ++R W+ST G AFY L+APL+ R+LFFAQI G ++QV+ RM +LQF VM++VM+GF ++ + F D D F + +FKAMLG+ G + + D V ++ V YL ++TVMLLNLLIAILST HA + E K SK R + HYR VV N+VLPAP NL+QL+ + ++++ L
Sbjct: 546 AVTSAANPFVPGVTLSIRLSEAAKQASEGERRALFDTKSSIDELLLEMFERLPQTVRGFEEQAGMDSCTNVLEPELMRATTGSNDLG--GPLDMIISDPLQLETFCKVPLIMDFLSSKFTLGLPDLMDTAGLLKNEHHLWYLEEDGLFRDEHGFGSDGIPVALLAALLKGVRQGIWDNTPILTFLPGTQFIVAAMVAAPTKYYEVPAMRMLLDFVVYVGMVAVLSSFVL------FHSTTESDSGLDGIVAHRLSLSEGACALIFITAGAYREGREMKRGIRAYFKDQWNVLDALGILFLFVGLVIRWDDWTSTWGP-------AFYALSAPLVVARVLFFAQILQFHGPMVQVIFRMTATLLQFGAVMLVVMIGFTMAL------HVFFRDVAD---FGDTLLGLFKAMLGETGIFDEFSGGRYDPVATILVVVYLCIVTVMLLNLLIAILSTEHAQVMENTAEAFKVSKARIIAHYRTVVDNDVLPAPFNLVQLILSLGVIVLTL 1028 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig7252.14920.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig7252.14920.1 >prot_H-elongata_contig7252.14920.1 ID=prot_H-elongata_contig7252.14920.1|Name=mRNA_H-elongata_contig7252.14920.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=705bp MMLSLALAMEAPTAKEDQRRKLTELQEMLEELLLEVLERLPQTVLGFPGGback to top mRNA from alignment at H-elongata_contig7252:6752..9914+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig7252.14920.1 ID=mRNA_H-elongata_contig7252.14920.1|Name=mRNA_H-elongata_contig7252.14920.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3163bp|location=Sequence derived from alignment at H-elongata_contig7252:6752..9914+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig7252:6752..9914+ >mRNA_H-elongata_contig7252.14920.1 ID=mRNA_H-elongata_contig7252.14920.1|Name=mRNA_H-elongata_contig7252.14920.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=4230bp|location=Sequence derived from alignment at H-elongata_contig7252:6752..9914+ (Himanthalia elongata Himel1 dioecious)back to top |