mRNA_H-elongata_contig72477.14915.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig72477.14915.1
Unique NamemRNA_H-elongata_contig72477.14915.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig72477.14915.1 vs. uniprot
Match: A0A6H5K229_9PHAE (Subtilisin n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K229_9PHAE)

HSP 1 Score: 306 bits (783), Expect = 1.030e-93
Identity = 154/269 (57.25%), Postives = 193/269 (71.75%), Query Frame = 1
Query:    1 QVVDTGLDETSCFFVDEDGDEIEHGHYFEEFGLLVYGYYTSTAEYVTYGSFQGGDFSYDSSRRKVVQYINLVKSDSESSSTKAYFTTSLGGKYPWLDATDFGEDEEAGHGTHTAGSAAGSTLNISAEIEDCSGTDVLGCVGGCISEDEYFDDLVSFYLQLFTYDIDRLCPSFDCGGYEAEVCLGDDVAETLTEHGGMAQGAKLAIFDIFYSDYSFGMYAENGVWEACLEAGCKVHSNSYGGDLMCEMSEVDVEYDDFMYNNPENLLIFA 807
            QVVDTGLDETSCFF+D+ G+E++HG++FEE  L V    T +++ + Y  F+ GDF+Y   RRKV+QYI LV  DS+       F+T+ GG YP+L   +FG+D+ AGHGTHTAGSAAG+TLN  AE   CSG + LGCVGGCI E E  DDLVS+ +Q+   D+DRLCP + C G   + CL D+V ETLT++GGMAQGAKL+IFD+F+  +       NGVWE CLEAGCKVHS S GGD +C   E ++ YDDFMY NPENLLIFA
Sbjct:  376 QVVDTGLDETSCFFIDDGGEEVDHGYFFEE--LFVGS--TGSSQLIYYPVFEAGDFTYTEERRKVIQYIELVNPDSD----YVAFSTTQGGVYPFLPPDEFGQDDSAGHGTHTAGSAAGATLNDPAETLTCSGDETLGCVGGCIDESETTDDLVSYAIQIALPDLDRLCPMYGCDG-STDPCLSDEVDETLTKNGGMAQGAKLSIFDVFFEVFGLIEVLGNGVWEPCLEAGCKVHSLSLGGDTLCTPGESEILYDDFMYENPENLLIFA 635          
BLAST of mRNA_H-elongata_contig72477.14915.1 vs. uniprot
Match: D8LNG4_ECTSI (Subtilisin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNG4_ECTSI)

HSP 1 Score: 286 bits (733), Expect = 3.280e-88
Identity = 154/300 (51.33%), Postives = 194/300 (64.67%), Query Frame = 1
Query:    1 QVVDTGLDETSCFFV-DEDGDEIEHGHYFEEFGL---LVYGYYTS---------------TAEYVTYGS-------FQGGDFSYDSSRRKVVQYINLVKSDSESSSTKAYFTTSLGGKYPWLDATDFGEDEEAGHGTHTAGSAAGSTLNISAEIEDCSGTDVLGCVGGCISEDEY--FDDLVSFYLQLFTYDIDRLCPSF---DCGGYEAEVCLGDDVAETLTEHGGMAQGAKLAIFDIFYSDYSFGMYAENGVWEACLEAGCKVHSNSYGGDLMCEMSEVDVEYDDFMYNNPENLLIFA 807
            QV+D+G+DE+SCFF  DE GD + HGHYFEE+G+   L    ++S               TA++ T GS       F GGDF+    RRK++QYINL+KSD    S    FTTSLG +YPWL A  F  D+EAGHGTH AGS AG+TLN  AE+  C+ T+ + CVG C+ +DE    DDL + Y+++   D+DRLCP F   DC G E + CL DDVAETLT +GGMAQGAKLAIFD FY  +    +   G+WE C +A CK+HSNSYGGD  C +   DV YD++M +NPENLLIFA
Sbjct:   56 QVIDSGVDESSCFFAHDESGDHVPHGHYFEEWGINPSLTSSSFSSPXXXXXXXXXXXPWATADHHT-GSYYQIAEEFDGGDFTIYPDRRKIIQYINLIKSDDTEGSHGDSFTTSLGQQYPWLSADHFEYDDEAGHGTHVAGSVAGATLNTPAELISCNDTETMSCVGACVDDDEANDVDDLATPYVEIA--DLDRLCPLFSDYDCDGLETDKCLSDDVAETLTNNGGMAQGAKLAIFDAFYDTFGLSPFVGTGLWEPCADADCKIHSNSYGGDFECSLGSNDVLYDEWMVSNPENLLIFA 352          
BLAST of mRNA_H-elongata_contig72477.14915.1 vs. uniprot
Match: A0A6H5JQT4_9PHAE (Subtilisin n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQT4_9PHAE)

HSP 1 Score: 280 bits (717), Expect = 8.190e-84
Identity = 151/298 (50.67%), Postives = 185/298 (62.08%), Query Frame = 1
Query:    1 QVVDTGLDETSCFFV-DEDGDEIEHGHYFEEFGL---LVYGYYTSTAE--------------------YVTYGSFQGGDFSYDSSRRKVVQYINLVKSDSESSSTKAYFTTSLGGKYPWLDATDFGEDEEAGHGTHTAGSAAGSTLNISAEIEDCSGTDVLGCVGGCISEDEY--FDDLVSFYLQLFTYDIDRLCPSF---DCGGYEAEVCLGDDVAETLTEHGGMAQGAKLAIFDIFYSDYSFGMYAENGVWEACLEAGCKVHSNSYGGDLMCEMSEVDVEYDDFMYNNPENLLIFA 807
            QV+D+G+DE+SCFF  DE GD + HGHYFEE+G+   L    ++S                       Y     F GGDF+    RRK++QYINL+KSD    S    FTTSLG +YPWL A  F  D EAGHGTH AGS AG+TLN  AE+  C  T+ + CVG C+ +DE    DDL +  +++   D+DRLCP F   DC   E E CL DDVAETLT +GGMAQGAKLAIFD FY ++    +  NG+WE C EA CK+HSNSYGGD  C +   DV YD +M +NPENLLIFA
Sbjct:  367 QVIDSGVDESSCFFAHDESGDHVPHGHYFEEWGINPPLTSSSFSSPTSDDDDSLGWPRATDDHRTGSYYQIAEEFDGGDFTIFPDRRKIIQYINLIKSDDTEGSHGDSFTTSLGQQYPWLPADRFEYDYEAGHGTHVAGSVAGATLNTPAELISCKDTETMSCVGACVDDDEANDVDDLATPNVEIV--DLDRLCPLFSDYDCDVLETEKCLSDDVAETLTNNGGMAQGAKLAIFDAFYDNFGLSPFVGNGLWEPCAEADCKIHSNSYGGDFECSLGPNDVLYDGWMVSNPENLLIFA 662          
BLAST of mRNA_H-elongata_contig72477.14915.1 vs. uniprot
Match: D8LBZ2_ECTSI (Subtilisin (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBZ2_ECTSI)

HSP 1 Score: 247 bits (630), Expect = 3.050e-74
Identity = 144/296 (48.65%), Postives = 184/296 (62.16%), Query Frame = 1
Query:    1 QVVDTGLDETSCFFVDEDGDE-IEHGHYFEEFGL---LVYGYYTSTAEYVTYGS-FQGGDFSYDSSRRKVVQYINLVKSDSESSSTKAYFT-------TSLGGKYPWLDATDFGEDEEAGHGTHTAGSAAGSTLNISAEIEDCSGTDV------LGCVGGCISEDEYF--DDLVS------FYLQLFTYDIDRLCPSFDCGGYEAEVCLGDDVAETLTEHGGMAQGAKLAIFDIFYSDYSFGM-YAENGVWEACLEAGCKVHSNSYGGDLMCEMSEVDVEYDDFMYNNPENLLIFA 807
            Q+VDTGLD  SCFFVDEDG E + HGHYFEE G+    +  ++TS    +     F GGDF++D SRRK+VQYINL++ DSE++ST    T       TS G +YPW+ A +F E+   GHGTHTAGSAAG+ ++  +  +    T+V      L CVGGCI  D+ F  DDL++      F+      D+DRLCP  DC     E CLGDD AETL +HGG+A+GA+LAIFDI       G+  A NG+WE  +EAG K+ SNS+G    CE    DV YDDFMY N + LL+FA
Sbjct:  171 QIVDTGLDVNSCFFVDEDGGEGVAHGHYFEEIGVEASALSSWFTSWDFNLQIARVFTGGDFNFDLSRRKIVQYINLIRQDSETNSTANNSTNYGESWATSAGDQYPWISAPEFAENYAGGHGTHTAGSAAGAVVSSPSYSQTGDFTEVCEEGRELSCVGGCIDVDDTFGGDDLITTWDYQYFWAGYEAIDLDRLCPRLDCDDRPEEYCLGDDEAETLQQHGGVARGAQLAIFDILDDYTGIGIEMAGNGMWEPAMEAGSKLSSNSWGIYAYCEYLSYDVLYDDFMYRNQDQLLLFA 466          
BLAST of mRNA_H-elongata_contig72477.14915.1 vs. uniprot
Match: D8LQI1_ECTSI (Subtilisin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQI1_ECTSI)

HSP 1 Score: 250 bits (639), Expect = 4.690e-73
Identity = 128/272 (47.06%), Postives = 179/272 (65.81%), Query Frame = 1
Query:    1 QVVDTGLDETSCFFVDEDGDEIEHGHYFEEFGLLVYGYYTSTAEYVTY--GSFQGGDFSYDSSRRKVVQYINLVKSDSESSSTKAYFTTSLGGKYPWLDATDFGEDEEAGHGTHTAGSAAGSTLNISAEIEDCS-GTDVLGCVGGCISEDEYFDDLVSFYLQLFTYDIDRLCPSFDCGGYEAEVCLGDDVAETLTEHGGMAQGAKLAIFDIFYSDYSFGMYAENGVWEACLEAGCKVHSNSYGGDLMCEMSEVDVEYDDFMYNNPENLLIFA 807
            Q++D G++ET+CF    DG E+EHG+YF+ F       +TS++E  +     F GGDFSYDS RRKV+QYI+L+  D+   S+            P++ A  F  D++ GHGTH A + AGST++  AE+  C+ G++V+GC GGCI+E         +       DI+RLCP+F C G   + CL DD A+TL+EHGGMAQGAK+A  D+FY DYS+G  A NG+WE C +AGCK+HSNSYG DL C+++ +DV YD++MY N E+LL+F+
Sbjct:  371 QIIDAGVNETTCFLEHGDGTEVEHGYYFD-FVASSNPLFTSSSESRSMFKAEFTGGDFSYDSDRRKVIQYIDLINPDTGDGSSSGM---------PFVSADSFVSDDDLGHGTHAATTVAGSTISSPAELVSCADGSEVIGCAGGCITESSTGSSEADY-----GEDINRLCPAFGCSG---DQCLPDDTADTLSEHGGMAQGAKIAAIDVFYGDYSYGDLAGNGLWETCADAGCKIHSNSYGVDLRCQLTALDVLYDEYMYENQEHLLLFS 624          
BLAST of mRNA_H-elongata_contig72477.14915.1 vs. uniprot
Match: A0A6H5L2G3_9PHAE (Subtilisin n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2G3_9PHAE)

HSP 1 Score: 243 bits (620), Expect = 3.670e-72
Identity = 125/271 (46.13%), Postives = 172/271 (63.47%), Query Frame = 1
Query:    1 QVVDTGLDETSCFFVDEDGDEIEHGHYFEEFGLLVYGYYTSTAEYVTY-GSFQGGDFSYDSSRRKVVQYINLVKSDSESSSTKAYFTTSLGGKYPWLDATDFGEDEEAGHGTHTAGSAAGSTLNISAEIEDCSGT-DVLGCVGGCISEDEYFDDLVSFYLQLFTYDIDRLCPSFDCGGYEAEVCLGDDVAETLTEHGGMAQGAKLAIFDIFYSDYSFGMYAENGVWEACLEAGCKVHSNSYGGDLMCEMSEVDVEYDDFMYNNPENLLIFA 807
            Q++D G++ET+CF    DG E+EHG+YF+        + +S+     +   F GGDF YDS RRKV+QYI+L+  D+   S+            P++ A  F  D++ GHGTHTA + AGST++  AE+  C+   +V+GC GGCI E         +       DI+RLCP+F C G   + CL DD A TL+EHGGMAQGAK+A  DIFY DYS+G  A NG+WE C +AGCK+HSNSYG DL C+++ +DV YD++MY N E+LL+F+
Sbjct:   60 QIIDAGVNETTCFLEHGDGTEVEHGYYFDFVASSNPSFDSSSESRSMFKAEFTGGDFFYDSDRRKVIQYIDLINPDTGDGSSSGM---------PFVSADSFVSDDDLGHGTHTATTVAGSTISSPAELVSCADNGEVIGCAGGCIIESSTGSTEADY-----GEDINRLCPAFGCSG---DQCLPDDTANTLSEHGGMAQGAKIAAIDIFYGDYSYGDLAGNGLWETCADAGCKIHSNSYGVDLRCQLTALDVLYDEYMYENQEHLLLFS 313          
BLAST of mRNA_H-elongata_contig72477.14915.1 vs. uniprot
Match: A0A6H5K365_9PHAE (Subtilisin n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K365_9PHAE)

HSP 1 Score: 243 bits (619), Expect = 9.740e-72
Identity = 138/279 (49.46%), Postives = 168/279 (60.22%), Query Frame = 1
Query:    1 QVVDTGLDETSCFFVDEDGDEIEHGHYFEEFG-LLVYGYYTSTAEYVTYGSFQGGDFSYDSSRRKVVQYINLVKSDSESSSTKAYFTTSLGGKYPW-LDATDFGEDEEAGHG--------THTAGSAAGSTLNISAEIEDCSGTDVLGCVGGCISEDEYFDDLVSFYLQLFTYDIDRLCPSFDCGGYEAEVCLGDDVAETLTEHGGMAQGAKLAIFDIFYSDYSFGMYAENGVWEACLEAGCKVHSNSYGGDLMCEMSEVDVEYDDFMYNNPENLLIFA 807
            QV+D+GLDETSC+F+D+ G+E++HG+YF+E     VY    S+ E  T   F GGDFSY   RRK++QYI+LV  DS  SS    F TS G    + L    FGED+EA                SAAG+TLN  AE   C+ TD L CVG CI   +  DDLVS   Q    D+DRLCP + C       CL DDV ETL+ +GGMAQGAKLAIFD+FY DY       N +WE C EAGCK+HSNS G D  C ++  D+  D FMY N E+LLIFA
Sbjct:   88 QVIDSGLDETSCYFIDDSGEEVDHGYYFDELAQAAVYSSLYSSDETATI--FNGGDFSYYPERRKIIQYIDLVNPDSPYSS----FYTSQGSYIGYFLPPDQFGEDDEARVALRKKDPSQARVGRSAAGATLNNPAETITCNVTDTLSCVGACIDLLDVTDDLVSISHQTGGTDLDRLCPMYGCDNSTDTTCLSDDVPETLSNNGGMAQGAKLAIFDVFYGDYDASSSIGNNLWEVCTEAGCKLHSNSLGADFECSIASWDILNDQFMYENAEHLLIFA 360          
BLAST of mRNA_H-elongata_contig72477.14915.1 vs. uniprot
Match: D8LNG6_ECTSI (Subtilisin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNG6_ECTSI)

HSP 1 Score: 229 bits (585), Expect = 1.370e-65
Identity = 128/270 (47.41%), Postives = 152/270 (56.30%), Query Frame = 1
Query:    1 QVVDTGLDETSCFFVDEDGDEIEHGHYFEEFG-LLVYGYYTSTAEYVTYGSFQGGDFSYDSSRRKVVQYINLVKSDSESSSTKAYFTTSLGGKYPWLDATDFGEDEEAGHGTHTAGSAAGSTLNISAEIEDCSGTDVLGCVGGCISEDEYFDDLVSFYLQLFTYDIDRLCPSFDCGGYEAEVCLGDDVAETLTEHGGMAQGAKLAIFDIFYSDYSFGMYAENGVWEACLEAGCKVHSNSYGGDLMCEMSEVDVEYDDFMYNNPENLLIFA 807
            QV+D+GLDETSC+F+D+ G+E++HG+YF+E G   VY    S+ E  T   F GGDFSY   RRK                                          AGHGTHTAGSAAG+TLN  AE   C+ TD L CVG CI   +  DDLVS   Q    D+DRLCP + C       CL DDV ETL+ +GGMAQGAKLAIFD+FY  Y       N +WE C EAGCK+HSNS G D  C ++  D+  D FMY N ENLLIFA
Sbjct:  374 QVIDSGLDETSCYFIDDSGEEVDHGYYFDELGRAAVYSSSYSSDETATI--FNGGDFSYYPERRK------------------------------------------AGHGTHTAGSAAGATLNDPAETITCNVTDTLSCVGACIDLLDATDDLVSISSQTDGTDLDRLCPMYGCDNSTDTTCLSDDVPETLSNNGGMAQGAKLAIFDVFYGGYDASSSIGNNLWEVCTEAGCKLHSNSLGADFECSIASWDILNDQFMYENAENLLIFA 599          
BLAST of mRNA_H-elongata_contig72477.14915.1 vs. uniprot
Match: A0A2I6U1R2_SACJA (Subtilisin (Fragment) n=1 Tax=Saccharina japonica TaxID=88149 RepID=A0A2I6U1R2_SACJA)

HSP 1 Score: 213 bits (543), Expect = 5.140e-60
Identity = 121/274 (44.16%), Postives = 146/274 (53.28%), Query Frame = 1
Query:    1 QVVDTGLDETSCFFVDEDGDEIEHGHYFEEFGLLVYGYYTSTAEYVTYGSFQGGDFSYDSSRRKVVQYINLVKSDSESSSTKAYFTTSLGGKYPWLDATDFGEDEEAGHGTHTAGSAAGSTLNISAEIED-CSGTDVLGCVGGCISEDE--YFDDLVSFYLQLFTYDID--RLCPSFDCGGYEAEVCLGDDVAETLTEHGGMAQGAKLAIFDIFYSDYSFGMYAENGVWEACLEAGCKVHSNSYGGDLMCEMSEVDVEYDDFMYNNPENLLIFA 807
            QV+DTGLDETSCFF+D+DG+E+ HGHY+E  G ++                                          SSS +                     D+  GHGTH AGSA G+T+   AE    CSGT+V GCVGGCI  D   + DDL +   +   YDID  RLCP  DC       CL DDV +TL +HGGMAQGAKLA FD+F    S   +  NG+WE CLEAGCK+HS S G D  C + E DV YDDFMYNNPENL++ A
Sbjct:  372 QVIDTGLDETSCFFIDDDGEEVPHGHYYEALGEII----------------------------------------PSSSSAR---------------------DDVEGHGTHCAGSALGATIRTPAETPTTCSGTEVPGCVGGCIDADRTSWGDDLFTLMPEYSPYDIDIDRLCPMIDCDDATDPRCLSDDVGQTLADHGGMAQGAKLAFFDVFADGSSGTHFVGNGLWEPCLEAGCKIHSMSIGADFECSVCEKDVLYDDFMYNNPENLVVVA 584          
BLAST of mRNA_H-elongata_contig72477.14915.1 vs. uniprot
Match: A0A6H5JKA8_9PHAE (Subtilisin n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKA8_9PHAE)

HSP 1 Score: 213 bits (542), Expect = 2.480e-59
Identity = 135/315 (42.86%), Postives = 177/315 (56.19%), Query Frame = 1
Query:    1 QVVDTGLDETSCFFVDEDGDE-IEHGHYFEEFGLLVYGY---YTSTAEYVTYGS-FQGGDFSYDSSRRK--VVQYI------------------------NLVKSDSESSSTKAYFTTSLGGKYPWLDATDFGEDEEAGHGTHTAGSAAGSTLNISAEIEDCSGTDV------LGCVGGCISEDEYF--DDLVS------FYLQLFTYDIDRLCPSFDCGGYEAEVCLGDDVAETLTEHGGMAQGAKLAIFDIFYSDYSFGM-YAENGVWEACLEAGCKVHSNSYGGDLMCEMSEVDVEYDDFMYNNPENLLIFA 807
            Q+VDTGLD  SCFFVDEDG E + HG+YFEE G+    +   +TS    V     F GGDF++D SRRK  VV                           N   + + S++    + TS G +YPW+ A +F ED+  GHGTHTAGSAAG+ ++  +  +    T+V      L CVGGCI  D+ F  DDL++      F+      D+DRLCP  DC     E CLGDD AETL +HGG+A+GA+LAIFDI       G+  A NG+WE  +EAG K+ SNS+G    C+   +DV +DDFMY N + LL+FA
Sbjct:  435 QIVDTGLDVNSCFFVDEDGGEGVAHGYYFEEIGVEASSFGSWFTSWDFNVQIARVFTGGDFNFDLSRRKGLVVDAAHPSCDSPNISRRFALGDVRAWSGENPACTANNSTNYGESWATSAGEQYPWISAAEFAEDDAGGHGTHTAGSAAGAVVSSPSYSQTGDFTEVCEEGRELSCVGGCIDVDDPFGEDDLITTWDYQYFWAGYEAIDLDRLCPRLDCDDLPEEYCLGDDEAETLQQHGGVARGAQLAIFDIINDYTGVGIDMAGNGMWEPAMEAGSKLSSNSWGIYAYCDYLSLDVLFDDFMYRNQDQLLLFA 749          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig72477.14915.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 20
Match NameE-valueIdentityDescription
A0A6H5K229_9PHAE1.030e-9357.25Subtilisin n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A... [more]
D8LNG4_ECTSI3.280e-8851.33Subtilisin n=1 Tax=Ectocarpus siliculosus TaxID=28... [more]
A0A6H5JQT4_9PHAE8.190e-8450.67Subtilisin n=1 Tax=Ectocarpus sp. CCAP 1310/34 Tax... [more]
D8LBZ2_ECTSI3.050e-7448.65Subtilisin (Fragment) n=1 Tax=Ectocarpus siliculos... [more]
D8LQI1_ECTSI4.690e-7347.06Subtilisin n=1 Tax=Ectocarpus siliculosus TaxID=28... [more]
A0A6H5L2G3_9PHAE3.670e-7246.13Subtilisin n=1 Tax=Ectocarpus sp. CCAP 1310/34 Tax... [more]
A0A6H5K365_9PHAE9.740e-7249.46Subtilisin n=1 Tax=Ectocarpus sp. CCAP 1310/34 Tax... [more]
D8LNG6_ECTSI1.370e-6547.41Subtilisin n=1 Tax=Ectocarpus siliculosus TaxID=28... [more]
A0A2I6U1R2_SACJA5.140e-6044.16Subtilisin (Fragment) n=1 Tax=Saccharina japonica ... [more]
A0A6H5JKA8_9PHAE2.480e-5942.86Subtilisin n=1 Tax=Ectocarpus sp. CCAP 1310/34 Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig72477contigH-elongata_contig72477:2..1369 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score295.0
Seed ortholog evalue3.4e-77
Seed eggNOG ortholog2880.D8LNG5
EggNOG free text desc.tripeptidyl-peptidase activity
EggNOG OGsCOG1404@1,KOG1114@2759
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons3
Model size809
Cds size807
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig72477.14915.1prot_H-elongata_contig72477.14915.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig72477 4..1369 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931126.2579973-CDS-H-elongata_contig72477:3..301622931126.2579973-CDS-H-elongata_contig72477:3..30Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig72477 4..30 -
1691679708.737961-CDS-H-elongata_contig72477:3..301691679708.737961-CDS-H-elongata_contig72477:3..30Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig72477 4..30 -
1622931126.2792528-CDS-H-elongata_contig72477:354..9421622931126.2792528-CDS-H-elongata_contig72477:354..942Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig72477 355..942 -
1691679708.7523196-CDS-H-elongata_contig72477:354..9421691679708.7523196-CDS-H-elongata_contig72477:354..942Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig72477 355..942 -
1622931126.2987335-CDS-H-elongata_contig72477:1177..13691622931126.2987335-CDS-H-elongata_contig72477:1177..1369Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig72477 1178..1369 -
1691679708.7599285-CDS-H-elongata_contig72477:1177..13691691679708.7599285-CDS-H-elongata_contig72477:1177..1369Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig72477 1178..1369 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig72477.14915.1

>prot_H-elongata_contig72477.14915.1 ID=prot_H-elongata_contig72477.14915.1|Name=mRNA_H-elongata_contig72477.14915.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=269bp
QVVDTGLDETSCFFVDEDGDEIEHGHYFEEFGLLVYGYYTSTAEYVTYGS
FQGGDFSYDSSRRKVVQYINLVKSDSESSSTKAYFTTSLGGKYPWLDATD
FGEDEEAGHGTHTAGSAAGSTLNISAEIEDCSGTDVLGCVGGCISEDEYF
DDLVSFYLQLFTYDIDRLCPSFDCGGYEAEVCLGDDVAETLTEHGGMAQG
AKLAIFDIFYSDYSFGMYAENGVWEACLEAGCKVHSNSYGGDLMCEMSEV
DVEYDDFMYNNPENLLIFA
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mRNA from alignment at H-elongata_contig72477:2..1369-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig72477.14915.1 ID=mRNA_H-elongata_contig72477.14915.1|Name=mRNA_H-elongata_contig72477.14915.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1368bp|location=Sequence derived from alignment at H-elongata_contig72477:2..1369- (Himanthalia elongata Himel1 dioecious)
CAGGTTGTCGATACTGGGTTGGATGAAACATCTTGCTTTTTCGTGGACGA GGACGGCGACGAGATTGAGCACGGACACTACTTTGAGGAGTTTGGACTTC TGGTTTATGGGTATTATACGTCCACGGCTGAGTACGTGACTTACGGAAGT TTCCAAGGAGGAGATTTCTCATACGACTCCAGCAGGCGCAAGGTACTTAG TGTCTTTTCTTGTGAGAGGATGGGCGAATGCTCGCAAATCCTTGCTTTGA TTTTTATCCAGCGAGATTGTGCCTTTCGCCTATAAGCCCCTCAATCCCAG TCACGTCTTGGCAATTGTATCCAGTCGAAGCCCTTGTCTGGTAAAGTTTG AGCAATCAATATGCATCCGATTGACCTCGATACCCTGTAAAGCTTGCTCC GTTTTTTCTGTGTATTGATCTGCGCAGGTAGTCCAATACATCAACCTCGT GAAGTCAGACTCTGAGTCAAGTTCAACAAAAGCATACTTCACAACCTCTT TAGGGGGAAAATATCCGTGGCTCGATGCAACGGATTTCGGAGAAGATGAA GAGGCCGGCCACGGCACCCACACAGCTGGATCAGCAGCAGGTTCGACGCT CAATATCTCCGCGGAGATAGAGGATTGTTCCGGTACCGACGTCCTGGGTT GTGTAGGCGGTTGCATATCGGAAGATGAATATTTTGACGATCTTGTGAGT TTCTACTTGCAACTATTTACATACGACATCGATCGACTTTGTCCAAGCTT CGATTGCGGCGGGTACGAAGCGGAGGTTTGCCTTGGTGATGATGTCGCCG AGACCCTGACGGAGCATGGTGGAATGGCTCAGGGAGCGAAGCTCGCGATC TTCGACATATTTTACTCCGATTATTCTTTTGGTATGTACGCTGAAAATGG AGTATGGGAGGCATGCTTGGAGGCTGGATGTAAGGTGCACTCCAATTCGT ACGGCGGGGACTTAATGTGCGAGATGAGCGAGGTGGACGTCGAATACGAC GACTTCATGTACAACGTGAGAGTCGCGTTGTTGTAGCGGCCAATCATCTT TCACTAAAGCAGTCAGATTTATCCCCGAAACCTATATTCAGCTCCGGCTA TCTCGGAGCCAGGGTTTACTACACTATGAAGTGTAACACTGCGCTAACTC TGGCTTGCTTGCTTTTGACAGTGGTGAAGTATGGTTCGGTGTCGAGTACG GTCCGCAAGTCGCTACGCCAGCGTGTTTCACCCTGCTTTAAGCACCATGA TGGAAACTCAGACCTCGCTAGCTATAGCCTATCTAAGATGAAGATATACG TATGTCGGCTTTATCGCTGCGTTTTTGGAATCGATCCAGAACCCGGAAAA TCTACTCATATTCGCGGC
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Coding sequence (CDS) from alignment at H-elongata_contig72477:2..1369-

>mRNA_H-elongata_contig72477.14915.1 ID=mRNA_H-elongata_contig72477.14915.1|Name=mRNA_H-elongata_contig72477.14915.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1614bp|location=Sequence derived from alignment at H-elongata_contig72477:2..1369- (Himanthalia elongata Himel1 dioecious)
CAGGTTGTCGATACTGGGTTGGATGAAACATCTTGCTTTTTCGTGGACGA
GGACGGCGACGAGATTGAGCACGGACACTACTTTGAGGAGTTTGGACTTC
TGGTTTATGGGTATTATACGTCCACGGCTGAGTACGTGACTTACGGAAGT
TTCCAAGGAGGAGATTTCTCATACGACTCCAGCAGGCGCAAGCAGGTTGT
CGATACTGGGTTGGATGAAACATCTTGCTTTTTCGTGGACGAGGACGGCG
ACGAGATTGAGCACGGACACTACTTTGAGGAGTTTGGACTTCTGGTTTAT
GGGTATTATACGTCCACGGCTGAGTACGTGACTTACGGAAGTTTCCAAGG
AGGAGATTTCTCATACGACTCCAGCAGGCGCAAGGTAGTCCAATACATCA
ACCTCGTGAAGTCAGACTCTGAGTCAAGTTCAACAAAAGCATACTTCACA
ACCTCTTTAGGGGGAAAATATCCGTGGCTCGATGCAACGGATTTCGGAGA
AGATGAAGAGGCCGGCCACGGCACCCACACAGCTGGATCAGCAGCAGGTT
CGACGCTCAATATCTCCGCGGAGATAGAGGATTGTTCCGGTACCGACGTC
CTGGGTTGTGTAGGCGGTTGCATATCGGAAGATGAATATTTTGACGATCT
TGTGAGTTTCTACTTGCAACTATTTACATACGACATCGATCGACTTTGTC
CAAGCTTCGATTGCGGCGGGTACGAAGCGGAGGTTTGCCTTGGTGATGAT
GTCGCCGAGACCCTGACGGAGCATGGTGGAATGGCTCAGGGAGCGAAGCT
CGCGATCTTCGACATATTTTACTCCGATTATTCTTTTGGTATGTACGCTG
AAAATGGAGTATGGGAGGCATGCTTGGAGGCTGGATGTAAGGTGCACTCC
AATTCGTACGGCGGGGACTTAATGTGCGAGATGAGCGAGGTGGACGTCGA
ATACGACGACTTCATGTACAACGTAGTCCAATACATCAACCTCGTGAAGT
CAGACTCTGAGTCAAGTTCAACAAAAGCATACTTCACAACCTCTTTAGGG
GGAAAATATCCGTGGCTCGATGCAACGGATTTCGGAGAAGATGAAGAGGC
CGGCCACGGCACCCACACAGCTGGATCAGCAGCAGGTTCGACGCTCAATA
TCTCCGCGGAGATAGAGGATTGTTCCGGTACCGACGTCCTGGGTTGTGTA
GGCGGTTGCATATCGGAAGATGAATATTTTGACGATCTTGTGAGTTTCTA
CTTGCAACTATTTACATACGACATCGATCGACTTTGTCCAAGCTTCGATT
GCGGCGGGTACGAAGCGGAGGTTTGCCTTGGTGATGATGTCGCCGAGACC
CTGACGGAGCATGGTGGAATGGCTCAGGGAGCGAAGCTCGCGATCTTCGA
CATATTTTACTCCGATTATTCTTTTGGTATGTACGCTGAAAATGGAGTAT
GGGAGGCATGCTTGGAGGCTGGATGTAAGGTGCACTCCAATTCGTACGGC
GGGGACTTAATGTGCGAGATGAGCGAGGTGGACGTCGAATACGACGACTT
CATGTACAACAACCCGGAAAATCTACTCATATTCGCGAACCCGGAAAATC
TACTCATATTCGCG
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