mRNA_H-elongata_contig72477.14915.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig72477.14915.1 vs. uniprot
Match: A0A6H5K229_9PHAE (Subtilisin n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K229_9PHAE) HSP 1 Score: 306 bits (783), Expect = 1.030e-93 Identity = 154/269 (57.25%), Postives = 193/269 (71.75%), Query Frame = 1
Query: 1 QVVDTGLDETSCFFVDEDGDEIEHGHYFEEFGLLVYGYYTSTAEYVTYGSFQGGDFSYDSSRRKVVQYINLVKSDSESSSTKAYFTTSLGGKYPWLDATDFGEDEEAGHGTHTAGSAAGSTLNISAEIEDCSGTDVLGCVGGCISEDEYFDDLVSFYLQLFTYDIDRLCPSFDCGGYEAEVCLGDDVAETLTEHGGMAQGAKLAIFDIFYSDYSFGMYAENGVWEACLEAGCKVHSNSYGGDLMCEMSEVDVEYDDFMYNNPENLLIFA 807
QVVDTGLDETSCFF+D+ G+E++HG++FEE L V T +++ + Y F+ GDF+Y RRKV+QYI LV DS+ F+T+ GG YP+L +FG+D+ AGHGTHTAGSAAG+TLN AE CSG + LGCVGGCI E E DDLVS+ +Q+ D+DRLCP + C G + CL D+V ETLT++GGMAQGAKL+IFD+F+ + NGVWE CLEAGCKVHS S GGD +C E ++ YDDFMY NPENLLIFA
Sbjct: 376 QVVDTGLDETSCFFIDDGGEEVDHGYFFEE--LFVGS--TGSSQLIYYPVFEAGDFTYTEERRKVIQYIELVNPDSD----YVAFSTTQGGVYPFLPPDEFGQDDSAGHGTHTAGSAAGATLNDPAETLTCSGDETLGCVGGCIDESETTDDLVSYAIQIALPDLDRLCPMYGCDG-STDPCLSDEVDETLTKNGGMAQGAKLSIFDVFFEVFGLIEVLGNGVWEPCLEAGCKVHSLSLGGDTLCTPGESEILYDDFMYENPENLLIFA 635
BLAST of mRNA_H-elongata_contig72477.14915.1 vs. uniprot
Match: D8LNG4_ECTSI (Subtilisin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNG4_ECTSI) HSP 1 Score: 286 bits (733), Expect = 3.280e-88 Identity = 154/300 (51.33%), Postives = 194/300 (64.67%), Query Frame = 1
Query: 1 QVVDTGLDETSCFFV-DEDGDEIEHGHYFEEFGL---LVYGYYTS---------------TAEYVTYGS-------FQGGDFSYDSSRRKVVQYINLVKSDSESSSTKAYFTTSLGGKYPWLDATDFGEDEEAGHGTHTAGSAAGSTLNISAEIEDCSGTDVLGCVGGCISEDEY--FDDLVSFYLQLFTYDIDRLCPSF---DCGGYEAEVCLGDDVAETLTEHGGMAQGAKLAIFDIFYSDYSFGMYAENGVWEACLEAGCKVHSNSYGGDLMCEMSEVDVEYDDFMYNNPENLLIFA 807
QV+D+G+DE+SCFF DE GD + HGHYFEE+G+ L ++S TA++ T GS F GGDF+ RRK++QYINL+KSD S FTTSLG +YPWL A F D+EAGHGTH AGS AG+TLN AE+ C+ T+ + CVG C+ +DE DDL + Y+++ D+DRLCP F DC G E + CL DDVAETLT +GGMAQGAKLAIFD FY + + G+WE C +A CK+HSNSYGGD C + DV YD++M +NPENLLIFA
Sbjct: 56 QVIDSGVDESSCFFAHDESGDHVPHGHYFEEWGINPSLTSSSFSSPXXXXXXXXXXXPWATADHHT-GSYYQIAEEFDGGDFTIYPDRRKIIQYINLIKSDDTEGSHGDSFTTSLGQQYPWLSADHFEYDDEAGHGTHVAGSVAGATLNTPAELISCNDTETMSCVGACVDDDEANDVDDLATPYVEIA--DLDRLCPLFSDYDCDGLETDKCLSDDVAETLTNNGGMAQGAKLAIFDAFYDTFGLSPFVGTGLWEPCADADCKIHSNSYGGDFECSLGSNDVLYDEWMVSNPENLLIFA 352
BLAST of mRNA_H-elongata_contig72477.14915.1 vs. uniprot
Match: A0A6H5JQT4_9PHAE (Subtilisin n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQT4_9PHAE) HSP 1 Score: 280 bits (717), Expect = 8.190e-84 Identity = 151/298 (50.67%), Postives = 185/298 (62.08%), Query Frame = 1
Query: 1 QVVDTGLDETSCFFV-DEDGDEIEHGHYFEEFGL---LVYGYYTSTAE--------------------YVTYGSFQGGDFSYDSSRRKVVQYINLVKSDSESSSTKAYFTTSLGGKYPWLDATDFGEDEEAGHGTHTAGSAAGSTLNISAEIEDCSGTDVLGCVGGCISEDEY--FDDLVSFYLQLFTYDIDRLCPSF---DCGGYEAEVCLGDDVAETLTEHGGMAQGAKLAIFDIFYSDYSFGMYAENGVWEACLEAGCKVHSNSYGGDLMCEMSEVDVEYDDFMYNNPENLLIFA 807
QV+D+G+DE+SCFF DE GD + HGHYFEE+G+ L ++S Y F GGDF+ RRK++QYINL+KSD S FTTSLG +YPWL A F D EAGHGTH AGS AG+TLN AE+ C T+ + CVG C+ +DE DDL + +++ D+DRLCP F DC E E CL DDVAETLT +GGMAQGAKLAIFD FY ++ + NG+WE C EA CK+HSNSYGGD C + DV YD +M +NPENLLIFA
Sbjct: 367 QVIDSGVDESSCFFAHDESGDHVPHGHYFEEWGINPPLTSSSFSSPTSDDDDSLGWPRATDDHRTGSYYQIAEEFDGGDFTIFPDRRKIIQYINLIKSDDTEGSHGDSFTTSLGQQYPWLPADRFEYDYEAGHGTHVAGSVAGATLNTPAELISCKDTETMSCVGACVDDDEANDVDDLATPNVEIV--DLDRLCPLFSDYDCDVLETEKCLSDDVAETLTNNGGMAQGAKLAIFDAFYDNFGLSPFVGNGLWEPCAEADCKIHSNSYGGDFECSLGPNDVLYDGWMVSNPENLLIFA 662
BLAST of mRNA_H-elongata_contig72477.14915.1 vs. uniprot
Match: D8LBZ2_ECTSI (Subtilisin (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBZ2_ECTSI) HSP 1 Score: 247 bits (630), Expect = 3.050e-74 Identity = 144/296 (48.65%), Postives = 184/296 (62.16%), Query Frame = 1
Query: 1 QVVDTGLDETSCFFVDEDGDE-IEHGHYFEEFGL---LVYGYYTSTAEYVTYGS-FQGGDFSYDSSRRKVVQYINLVKSDSESSSTKAYFT-------TSLGGKYPWLDATDFGEDEEAGHGTHTAGSAAGSTLNISAEIEDCSGTDV------LGCVGGCISEDEYF--DDLVS------FYLQLFTYDIDRLCPSFDCGGYEAEVCLGDDVAETLTEHGGMAQGAKLAIFDIFYSDYSFGM-YAENGVWEACLEAGCKVHSNSYGGDLMCEMSEVDVEYDDFMYNNPENLLIFA 807
Q+VDTGLD SCFFVDEDG E + HGHYFEE G+ + ++TS + F GGDF++D SRRK+VQYINL++ DSE++ST T TS G +YPW+ A +F E+ GHGTHTAGSAAG+ ++ + + T+V L CVGGCI D+ F DDL++ F+ D+DRLCP DC E CLGDD AETL +HGG+A+GA+LAIFDI G+ A NG+WE +EAG K+ SNS+G CE DV YDDFMY N + LL+FA
Sbjct: 171 QIVDTGLDVNSCFFVDEDGGEGVAHGHYFEEIGVEASALSSWFTSWDFNLQIARVFTGGDFNFDLSRRKIVQYINLIRQDSETNSTANNSTNYGESWATSAGDQYPWISAPEFAENYAGGHGTHTAGSAAGAVVSSPSYSQTGDFTEVCEEGRELSCVGGCIDVDDTFGGDDLITTWDYQYFWAGYEAIDLDRLCPRLDCDDRPEEYCLGDDEAETLQQHGGVARGAQLAIFDILDDYTGIGIEMAGNGMWEPAMEAGSKLSSNSWGIYAYCEYLSYDVLYDDFMYRNQDQLLLFA 466
BLAST of mRNA_H-elongata_contig72477.14915.1 vs. uniprot
Match: D8LQI1_ECTSI (Subtilisin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQI1_ECTSI) HSP 1 Score: 250 bits (639), Expect = 4.690e-73 Identity = 128/272 (47.06%), Postives = 179/272 (65.81%), Query Frame = 1
Query: 1 QVVDTGLDETSCFFVDEDGDEIEHGHYFEEFGLLVYGYYTSTAEYVTY--GSFQGGDFSYDSSRRKVVQYINLVKSDSESSSTKAYFTTSLGGKYPWLDATDFGEDEEAGHGTHTAGSAAGSTLNISAEIEDCS-GTDVLGCVGGCISEDEYFDDLVSFYLQLFTYDIDRLCPSFDCGGYEAEVCLGDDVAETLTEHGGMAQGAKLAIFDIFYSDYSFGMYAENGVWEACLEAGCKVHSNSYGGDLMCEMSEVDVEYDDFMYNNPENLLIFA 807
Q++D G++ET+CF DG E+EHG+YF+ F +TS++E + F GGDFSYDS RRKV+QYI+L+ D+ S+ P++ A F D++ GHGTH A + AGST++ AE+ C+ G++V+GC GGCI+E + DI+RLCP+F C G + CL DD A+TL+EHGGMAQGAK+A D+FY DYS+G A NG+WE C +AGCK+HSNSYG DL C+++ +DV YD++MY N E+LL+F+
Sbjct: 371 QIIDAGVNETTCFLEHGDGTEVEHGYYFD-FVASSNPLFTSSSESRSMFKAEFTGGDFSYDSDRRKVIQYIDLINPDTGDGSSSGM---------PFVSADSFVSDDDLGHGTHAATTVAGSTISSPAELVSCADGSEVIGCAGGCITESSTGSSEADY-----GEDINRLCPAFGCSG---DQCLPDDTADTLSEHGGMAQGAKIAAIDVFYGDYSYGDLAGNGLWETCADAGCKIHSNSYGVDLRCQLTALDVLYDEYMYENQEHLLLFS 624
BLAST of mRNA_H-elongata_contig72477.14915.1 vs. uniprot
Match: A0A6H5L2G3_9PHAE (Subtilisin n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2G3_9PHAE) HSP 1 Score: 243 bits (620), Expect = 3.670e-72 Identity = 125/271 (46.13%), Postives = 172/271 (63.47%), Query Frame = 1
Query: 1 QVVDTGLDETSCFFVDEDGDEIEHGHYFEEFGLLVYGYYTSTAEYVTY-GSFQGGDFSYDSSRRKVVQYINLVKSDSESSSTKAYFTTSLGGKYPWLDATDFGEDEEAGHGTHTAGSAAGSTLNISAEIEDCSGT-DVLGCVGGCISEDEYFDDLVSFYLQLFTYDIDRLCPSFDCGGYEAEVCLGDDVAETLTEHGGMAQGAKLAIFDIFYSDYSFGMYAENGVWEACLEAGCKVHSNSYGGDLMCEMSEVDVEYDDFMYNNPENLLIFA 807
Q++D G++ET+CF DG E+EHG+YF+ + +S+ + F GGDF YDS RRKV+QYI+L+ D+ S+ P++ A F D++ GHGTHTA + AGST++ AE+ C+ +V+GC GGCI E + DI+RLCP+F C G + CL DD A TL+EHGGMAQGAK+A DIFY DYS+G A NG+WE C +AGCK+HSNSYG DL C+++ +DV YD++MY N E+LL+F+
Sbjct: 60 QIIDAGVNETTCFLEHGDGTEVEHGYYFDFVASSNPSFDSSSESRSMFKAEFTGGDFFYDSDRRKVIQYIDLINPDTGDGSSSGM---------PFVSADSFVSDDDLGHGTHTATTVAGSTISSPAELVSCADNGEVIGCAGGCIIESSTGSTEADY-----GEDINRLCPAFGCSG---DQCLPDDTANTLSEHGGMAQGAKIAAIDIFYGDYSYGDLAGNGLWETCADAGCKIHSNSYGVDLRCQLTALDVLYDEYMYENQEHLLLFS 313
BLAST of mRNA_H-elongata_contig72477.14915.1 vs. uniprot
Match: A0A6H5K365_9PHAE (Subtilisin n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K365_9PHAE) HSP 1 Score: 243 bits (619), Expect = 9.740e-72 Identity = 138/279 (49.46%), Postives = 168/279 (60.22%), Query Frame = 1
Query: 1 QVVDTGLDETSCFFVDEDGDEIEHGHYFEEFG-LLVYGYYTSTAEYVTYGSFQGGDFSYDSSRRKVVQYINLVKSDSESSSTKAYFTTSLGGKYPW-LDATDFGEDEEAGHG--------THTAGSAAGSTLNISAEIEDCSGTDVLGCVGGCISEDEYFDDLVSFYLQLFTYDIDRLCPSFDCGGYEAEVCLGDDVAETLTEHGGMAQGAKLAIFDIFYSDYSFGMYAENGVWEACLEAGCKVHSNSYGGDLMCEMSEVDVEYDDFMYNNPENLLIFA 807
QV+D+GLDETSC+F+D+ G+E++HG+YF+E VY S+ E T F GGDFSY RRK++QYI+LV DS SS F TS G + L FGED+EA SAAG+TLN AE C+ TD L CVG CI + DDLVS Q D+DRLCP + C CL DDV ETL+ +GGMAQGAKLAIFD+FY DY N +WE C EAGCK+HSNS G D C ++ D+ D FMY N E+LLIFA
Sbjct: 88 QVIDSGLDETSCYFIDDSGEEVDHGYYFDELAQAAVYSSLYSSDETATI--FNGGDFSYYPERRKIIQYIDLVNPDSPYSS----FYTSQGSYIGYFLPPDQFGEDDEARVALRKKDPSQARVGRSAAGATLNNPAETITCNVTDTLSCVGACIDLLDVTDDLVSISHQTGGTDLDRLCPMYGCDNSTDTTCLSDDVPETLSNNGGMAQGAKLAIFDVFYGDYDASSSIGNNLWEVCTEAGCKLHSNSLGADFECSIASWDILNDQFMYENAEHLLIFA 360
BLAST of mRNA_H-elongata_contig72477.14915.1 vs. uniprot
Match: D8LNG6_ECTSI (Subtilisin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNG6_ECTSI) HSP 1 Score: 229 bits (585), Expect = 1.370e-65 Identity = 128/270 (47.41%), Postives = 152/270 (56.30%), Query Frame = 1
Query: 1 QVVDTGLDETSCFFVDEDGDEIEHGHYFEEFG-LLVYGYYTSTAEYVTYGSFQGGDFSYDSSRRKVVQYINLVKSDSESSSTKAYFTTSLGGKYPWLDATDFGEDEEAGHGTHTAGSAAGSTLNISAEIEDCSGTDVLGCVGGCISEDEYFDDLVSFYLQLFTYDIDRLCPSFDCGGYEAEVCLGDDVAETLTEHGGMAQGAKLAIFDIFYSDYSFGMYAENGVWEACLEAGCKVHSNSYGGDLMCEMSEVDVEYDDFMYNNPENLLIFA 807
QV+D+GLDETSC+F+D+ G+E++HG+YF+E G VY S+ E T F GGDFSY RRK AGHGTHTAGSAAG+TLN AE C+ TD L CVG CI + DDLVS Q D+DRLCP + C CL DDV ETL+ +GGMAQGAKLAIFD+FY Y N +WE C EAGCK+HSNS G D C ++ D+ D FMY N ENLLIFA
Sbjct: 374 QVIDSGLDETSCYFIDDSGEEVDHGYYFDELGRAAVYSSSYSSDETATI--FNGGDFSYYPERRK------------------------------------------AGHGTHTAGSAAGATLNDPAETITCNVTDTLSCVGACIDLLDATDDLVSISSQTDGTDLDRLCPMYGCDNSTDTTCLSDDVPETLSNNGGMAQGAKLAIFDVFYGGYDASSSIGNNLWEVCTEAGCKLHSNSLGADFECSIASWDILNDQFMYENAENLLIFA 599
BLAST of mRNA_H-elongata_contig72477.14915.1 vs. uniprot
Match: A0A2I6U1R2_SACJA (Subtilisin (Fragment) n=1 Tax=Saccharina japonica TaxID=88149 RepID=A0A2I6U1R2_SACJA) HSP 1 Score: 213 bits (543), Expect = 5.140e-60 Identity = 121/274 (44.16%), Postives = 146/274 (53.28%), Query Frame = 1
Query: 1 QVVDTGLDETSCFFVDEDGDEIEHGHYFEEFGLLVYGYYTSTAEYVTYGSFQGGDFSYDSSRRKVVQYINLVKSDSESSSTKAYFTTSLGGKYPWLDATDFGEDEEAGHGTHTAGSAAGSTLNISAEIED-CSGTDVLGCVGGCISEDE--YFDDLVSFYLQLFTYDID--RLCPSFDCGGYEAEVCLGDDVAETLTEHGGMAQGAKLAIFDIFYSDYSFGMYAENGVWEACLEAGCKVHSNSYGGDLMCEMSEVDVEYDDFMYNNPENLLIFA 807
QV+DTGLDETSCFF+D+DG+E+ HGHY+E G ++ SSS + D+ GHGTH AGSA G+T+ AE CSGT+V GCVGGCI D + DDL + + YDID RLCP DC CL DDV +TL +HGGMAQGAKLA FD+F S + NG+WE CLEAGCK+HS S G D C + E DV YDDFMYNNPENL++ A
Sbjct: 372 QVIDTGLDETSCFFIDDDGEEVPHGHYYEALGEII----------------------------------------PSSSSAR---------------------DDVEGHGTHCAGSALGATIRTPAETPTTCSGTEVPGCVGGCIDADRTSWGDDLFTLMPEYSPYDIDIDRLCPMIDCDDATDPRCLSDDVGQTLADHGGMAQGAKLAFFDVFADGSSGTHFVGNGLWEPCLEAGCKIHSMSIGADFECSVCEKDVLYDDFMYNNPENLVVVA 584
BLAST of mRNA_H-elongata_contig72477.14915.1 vs. uniprot
Match: A0A6H5JKA8_9PHAE (Subtilisin n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKA8_9PHAE) HSP 1 Score: 213 bits (542), Expect = 2.480e-59 Identity = 135/315 (42.86%), Postives = 177/315 (56.19%), Query Frame = 1
Query: 1 QVVDTGLDETSCFFVDEDGDE-IEHGHYFEEFGLLVYGY---YTSTAEYVTYGS-FQGGDFSYDSSRRK--VVQYI------------------------NLVKSDSESSSTKAYFTTSLGGKYPWLDATDFGEDEEAGHGTHTAGSAAGSTLNISAEIEDCSGTDV------LGCVGGCISEDEYF--DDLVS------FYLQLFTYDIDRLCPSFDCGGYEAEVCLGDDVAETLTEHGGMAQGAKLAIFDIFYSDYSFGM-YAENGVWEACLEAGCKVHSNSYGGDLMCEMSEVDVEYDDFMYNNPENLLIFA 807
Q+VDTGLD SCFFVDEDG E + HG+YFEE G+ + +TS V F GGDF++D SRRK VV N + + S++ + TS G +YPW+ A +F ED+ GHGTHTAGSAAG+ ++ + + T+V L CVGGCI D+ F DDL++ F+ D+DRLCP DC E CLGDD AETL +HGG+A+GA+LAIFDI G+ A NG+WE +EAG K+ SNS+G C+ +DV +DDFMY N + LL+FA
Sbjct: 435 QIVDTGLDVNSCFFVDEDGGEGVAHGYYFEEIGVEASSFGSWFTSWDFNVQIARVFTGGDFNFDLSRRKGLVVDAAHPSCDSPNISRRFALGDVRAWSGENPACTANNSTNYGESWATSAGEQYPWISAAEFAEDDAGGHGTHTAGSAAGAVVSSPSYSQTGDFTEVCEEGRELSCVGGCIDVDDPFGEDDLITTWDYQYFWAGYEAIDLDRLCPRLDCDDLPEEYCLGDDEAETLQQHGGVARGAQLAIFDIINDYTGVGIDMAGNGMWEPAMEAGSKLSSNSWGIYAYCDYLSLDVLFDDFMYRNQDQLLLFA 749 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig72477.14915.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 20
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig72477.14915.1 >prot_H-elongata_contig72477.14915.1 ID=prot_H-elongata_contig72477.14915.1|Name=mRNA_H-elongata_contig72477.14915.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=269bp QVVDTGLDETSCFFVDEDGDEIEHGHYFEEFGLLVYGYYTSTAEYVTYGSback to top mRNA from alignment at H-elongata_contig72477:2..1369- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig72477.14915.1 ID=mRNA_H-elongata_contig72477.14915.1|Name=mRNA_H-elongata_contig72477.14915.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1368bp|location=Sequence derived from alignment at H-elongata_contig72477:2..1369- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig72477:2..1369- >mRNA_H-elongata_contig72477.14915.1 ID=mRNA_H-elongata_contig72477.14915.1|Name=mRNA_H-elongata_contig72477.14915.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1614bp|location=Sequence derived from alignment at H-elongata_contig72477:2..1369- (Himanthalia elongata Himel1 dioecious)back to top |