mRNA_H-elongata_contig71669.14840.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig71669.14840.1
Unique NamemRNA_H-elongata_contig71669.14840.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig71669.14840.1 vs. uniprot
Match: D7FPZ1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPZ1_ECTSI)

HSP 1 Score: 333 bits (855), Expect = 4.370e-108
Identity = 190/309 (61.49%), Postives = 208/309 (67.31%), Query Frame = 1
Query:    1 QASADDFFLQCNGKHFNSFEESTCRVVFVSTTTFDLNPPAAAVPSTNGPAHGVPALVTVIPSSFEGSTNAAAGAATXXXXXTMEDSDSTLNSDSPPSTLVHSTLRFSPV-----------------------TKPAHGNGAAVVAGAAGTSMPTLSPEASEHGASTCVICMERMESRVLTTVCNHSFHVECLVKWQDSPCPVCRFHHNNASEASTCQECQATDNLWVCLICGSVLCGSRHEDHVLGHYGSTLHAYAIEIETQQVWDFAGDGFVHRLIRNKADGKLVEISDPGQTSKERPQVPARLSDIQ 858
            Q+SADDFFLQCNGK FNSFEE+TCRVVFV+  TFDL       P+ + P H  PA          GS   A     XXXXX       + ++ +PP   + +   FSP+                                  VA AAG           E+ ASTCVICMERMESRVLTTVCNHSFHVECL+KWQDSPCPVCRFHHNNASEASTCQECQA DNLWVCLICGSVLCGSRHEDH+ GHY STLHAYAIEIETQQVWDFAGDGFVHRLI NKADGKLVEISDP QTS+ERPQ+PARLSD+Q
Sbjct:  150 QSSADDFFLQCNGKRFNSFEETTCRVVFVAKATFDL-------PADSSPPHTPPA----------GSAVGATAXXXXXXXXXXGSGGISSSAGTPPQ--LRTARHFSPIGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAQAAGW----------EYDASTCVICMERMESRVLTTVCNHSFHVECLMKWQDSPCPVCRFHHNNASEASTCQECQAADNLWVCLICGSVLCGSRHEDHIRGHYNSTLHAYAIEIETQQVWDFAGDGFVHRLIHNKADGKLVEISDPEQTSEERPQMPARLSDVQ 429          
BLAST of mRNA_H-elongata_contig71669.14840.1 vs. uniprot
Match: A0A6H5K0J5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0J5_9PHAE)

HSP 1 Score: 317 bits (813), Expect = 1.010e-101
Identity = 181/294 (61.56%), Postives = 192/294 (65.31%), Query Frame = 1
Query:    4 ASADDFFLQCNGKHFNSFEESTCRVVFVSTTTFDLNPPAAAVPSTNGPAHGVPALVTVIPSSFEGSTNAAAGAATXXXXXTMEDSDSTLNSDSPPSTLVHSTLRFSPVTKPAHGNGAAV---------VAGAAGTSMPTLSPEASEHGASTCVICMERMESRVLTTVCNHSFHVECLVKWQDSPCPVCRFHHNNASEASTCQECQATDNLWVCLICGSVLCGSRHEDHVLGHYGSTLHAYAIEIETQQVWDFAGDGFVHRLIRNKADGKLVEISDPGQTSKERPQVPARLSDIQ 858
            +SADDFFLQCNGK FNSFEE+TCRVVFV+  TFDL       P+ + P H  PA                     XXXXX                                                VA AAG           E+ ASTCVICME MESRVLTTVCNHSFHVECL+KWQDSPCPVCRFHHNNASEASTCQECQATDNLWVCLICGSVLCGSRHEDH+ GHY STLHAYAIEIETQQVWDFAGDGFVHRLI NKADGKLVEISDP QTS+ERPQ+PARLSD+Q
Sbjct:    8 SSADDFFLQCNGKRFNSFEETTCRVVFVAKATFDL-------PADSSPPHTPPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAQAAGW----------EYDASTCVICMEHMESRVLTTVCNHSFHVECLMKWQDSPCPVCRFHHNNASEASTCQECQATDNLWVCLICGSVLCGSRHEDHIRGHYNSTLHAYAIEIETQQVWDFAGDGFVHRLIHNKADGKLVEISDPEQTSEERPQMPARLSDVQ 284          
BLAST of mRNA_H-elongata_contig71669.14840.1 vs. uniprot
Match: A0A835YPP8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPP8_9STRA)

HSP 1 Score: 209 bits (532), Expect = 3.370e-59
Identity = 100/170 (58.82%), Postives = 123/170 (72.35%), Query Frame = 1
Query:  352 AAVVAGAAGTSMPTLSPEASEHGASTCVICMERMESRVLTTVCNHSFHVECLVKWQDSPCPVCRFHHNNASEASTCQECQATDNLWVCLICGSVLCGSRHED-HVLGHYGSTLHAYAIEIETQQVWDFAGDGFVHRLIRNKADGKLVEISDPGQTSKERPQVPARLSDIQ 858
            AA  AG A TS   L    +E     CVIC E++E   LTT C H+FH+EC+  WQDSPCPVCRFHHN + + STCQEC  + N+ VCLICG V CG R +  H+  H+ +TLHAYA+++ETQQVWDFAG GFVHRLI NKADGK+VE ++PG  S ERPQ P++LSD+Q
Sbjct:  333 AAAAAGPADTSQ-ALHSGGAEAREDACVICFEKLEGGTLTTACKHTFHIECIALWQDSPCPVCRFHHNGSGDDSTCQECGRSVNVHVCLICGYVGCGGREQGGHMSQHHLATLHAYALDVETQQVWDFAGGGFVHRLIYNKADGKMVEANNPGHASGERPQAPSQLSDVQ 501          
BLAST of mRNA_H-elongata_contig71669.14840.1 vs. uniprot
Match: H3GNL2_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GNL2_PHYRM)

HSP 1 Score: 180 bits (456), Expect = 3.390e-49
Identity = 108/286 (37.76%), Postives = 142/286 (49.65%), Query Frame = 1
Query:    1 QASADDFFLQCNGKHFNSFEESTCRVVFVSTTTFDLNPPAAAVPSTNGPAHGVPALVTVIPSSFEGSTNAAAGAATXXXXXTMEDSDSTLNSDSPPSTLVHSTLRFSPVTKPAHGNGAAVVAGAAGTSMPTLSPEASEHGASTCVICMERME---SRVLTTVCNHSFHVECLVKWQDSPCPVCRFHHNNASEASTCQECQATDNLWVCLICGSVLCGSRHEDHVLGHYGSTLHAYAIEIETQQVWDFAGDGFVHRLIRNKADGKLVEISDPGQTSKERPQVPARLS 849
            Q  AD FFL  NGK+FNS E+  C++VFV +  FD        P   G      AL        +     A  AAT                 SP S    S+ +   +  P                     P        TC +C++R++   S +LTT+CNHSFH +CL +W+ S CPVCR+ H +    S+C+ C  T++LW+CLICG V CG    +H   HY  TLH Y++E+ETQ+VWD+AGDG+VHRLI NK DGK VE  +P   S ER Q P   S
Sbjct:  126 QERADQFFLDHNGKYFNSIEQERCKIVFVRSIEFD--------PVLGGDHPDCDAL-----EEKQTDEETAVAAATPL---------------SPRSERRASSAQMRKLFPP---------------------PPVGMTEIPTCAVCLDRLDASASGILTTLCNHSFHCDCLFRWEGSSCPVCRYSHGDIG--SSCEVCGTTEHLWICLICGHVGCGRYSGEHAKQHYQETLHTYSLELETQRVWDYAGDGYVHRLILNKQDGKFVEFPNPSNMSGERSQNPPTTS 360          
BLAST of mRNA_H-elongata_contig71669.14840.1 vs. uniprot
Match: A0A1Z5K2I6_FISSO (BRCA1-associated protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K2I6_FISSO)

HSP 1 Score: 174 bits (441), Expect = 9.670e-48
Identity = 86/167 (51.50%), Postives = 104/167 (62.28%), Query Frame = 1
Query:  430 CVICMERMESR--VLTTVCNHSFHVECLVKWQDSPCPVCRFHHNNASEA-STCQECQATDNLWVCLICGSVLCGS--------------------RHEDHVLGHYGSTLHAYAIEIETQQVWDFAGDGFVHRLIRNKADGKLVEISDPGQTS-KERPQVPARLSDIQ 858
            C +C+E M+    + TTVCNHSFH++CL++WQDSPCPVCR+ H    EA S C +C  TD+ +VCLICG V CG                     R   H   HY  TLHAYA++  TQ VWDFAG G+VHRL++NK DGKLVEISDP  TS +ER   P  LSD Q
Sbjct:  142 CAVCLEHMDETTDIFTTVCNHSFHIDCLIQWQDSPCPVCRYDHAGLKEALSQCHQCGTTDHNYVCLICGIVACGGIPSNDTSASACHLPTQEPTPRATSHAQQHYDETLHAYALDTITQHVWDFAGQGYVHRLLQNKEDGKLVEISDPNNTSSQERSSHPTALSDAQ 308          
BLAST of mRNA_H-elongata_contig71669.14840.1 vs. uniprot
Match: A0A662YFP2_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YFP2_9STRA)

HSP 1 Score: 172 bits (437), Expect = 1.190e-47
Identity = 75/144 (52.08%), Postives = 98/144 (68.06%), Query Frame = 1
Query:  427 TCVICMERME---SRVLTTVCNHSFHVECLVKWQDSPCPVCRFHHNNASEASTCQECQATDNLWVCLICGSVLCGSRHEDHVLGHYGSTLHAYAIEIETQQVWDFAGDGFVHRLIRNKADGKLVEISDPGQTSKERPQVPARLS 849
            TC +C++R++   S +LTT+CNHSFH +CL +W+ S CPVCR+ H +   A  C+ C  T++LW+CLICG V CG    +H   HY  TLH Y++E+ETQ+VWD+AGDG+VHRLI NK DGK VE   P   S ER Q P   S
Sbjct:  231 TCAVCLDRLDASASGILTTLCNHSFHCDCLFRWEGSSCPVCRYSHGDIGSA--CEVCHTTEHLWICLICGHVGCGRYSGEHAKQHYQETLHTYSLELETQRVWDYAGDGYVHRLILNKQDGKFVEFPSPNNLSDERSQTPPTTS 372          
BLAST of mRNA_H-elongata_contig71669.14840.1 vs. uniprot
Match: A0A8K1CCW0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CCW0_PYTOL)

HSP 1 Score: 175 bits (443), Expect = 2.200e-47
Identity = 75/140 (53.57%), Postives = 101/140 (72.14%), Query Frame = 1
Query:  427 TCVICMERME---SRVLTTVCNHSFHVECLVKWQDSPCPVCRFHHNNASEASTCQECQATDNLWVCLICGSVLCGSRHEDHVLGHYGSTLHAYAIEIETQQVWDFAGDGFVHRLIRNKADGKLVEISDPGQTSKERPQVP 837
            TC +C++R++   S +LTT+CNH+FH +CL +W+ S CPVCR+ H +   A  C+ CQ T++LW+CLICG V CG    +H   HY  T+H Y++E+ETQ+VWD+AGDGFVHRLI NK DGK VE  +P  TS ER Q+P
Sbjct:  211 TCAVCLDRLDASASGILTTLCNHTFHCDCLFRWEGSSCPVCRYSHGDIGSA--CEVCQTTEHLWICLICGHVGCGRYSGEHAKQHYQETMHTYSLELETQRVWDYAGDGFVHRLILNKQDGKFVEFPNPDATSGERSQLP 348          
BLAST of mRNA_H-elongata_contig71669.14840.1 vs. uniprot
Match: A0A7S1CIL5_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CIL5_9STRA)

HSP 1 Score: 170 bits (431), Expect = 4.470e-47
Identity = 74/138 (53.62%), Postives = 95/138 (68.84%), Query Frame = 1
Query:  430 CVICMERMESR---VLTTVCNHSFHVECLVKWQDSPCPVCRFHHNNASEASTCQECQATDNLWVCLICGSVLCGSRHEDHVLGHYGSTLHAYAIEIETQQVWDFAGDGFVHRLIRNKADGKLVEISDPGQTSKERPQV 834
            C +C+ER++S    VLTT+CNHSFH  CL +W+DS CPVCRF   + +  + C  C  T+ LW+CL+CG V CG    +H   H+ +T H YA+E+ETQ+VWD+AGDG+VHRLI NK DGKLVE  DP     ER QV
Sbjct:   47 CPVCLERLDSSATGVLTTLCNHSFHCSCLRRWEDSSCPVCRFAQESEAPPTACSVCGETEKLWMCLVCGHVGCGRYSNEHAKAHFEATAHTYAMELETQRVWDYAGDGYVHRLITNKRDGKLVEFPDPHTAGGERTQV 184          
BLAST of mRNA_H-elongata_contig71669.14840.1 vs. uniprot
Match: W2PVR5_PHYPN (Uncharacterized protein n=8 Tax=Phytophthora parasitica TaxID=4792 RepID=W2PVR5_PHYPN)

HSP 1 Score: 170 bits (430), Expect = 9.590e-47
Identity = 74/144 (51.39%), Postives = 98/144 (68.06%), Query Frame = 1
Query:  427 TCVICMERME---SRVLTTVCNHSFHVECLVKWQDSPCPVCRFHHNNASEASTCQECQATDNLWVCLICGSVLCGSRHEDHVLGHYGSTLHAYAIEIETQQVWDFAGDGFVHRLIRNKADGKLVEISDPGQTSKERPQVPARLS 849
            TC +C++R++   S +LTT+CNHSFH +CL +W+ S CPVCR+ H +    S+C+ C   ++LW+CLICG V CG    +H   HY  TLH Y++E+ETQ+VWD+AGDG+VHRLI NK DGK VE   P   S ER Q P   S
Sbjct:  218 TCAVCLDRLDASASGILTTLCNHSFHCDCLFRWEGSSCPVCRYSHGDIG--SSCEVCGTAEHLWICLICGHVGCGRYSGEHAKQHYQETLHTYSLELETQRVWDYAGDGYVHRLILNKQDGKFVEFPSPNNLSGERSQTPPTTS 359          
BLAST of mRNA_H-elongata_contig71669.14840.1 vs. uniprot
Match: A0A507E5E2_9FUNG (Uncharacterized protein n=1 Tax=Powellomyces hirtus TaxID=109895 RepID=A0A507E5E2_9FUNG)

HSP 1 Score: 176 bits (447), Expect = 1.270e-46
Identity = 110/284 (38.73%), Postives = 155/284 (54.58%), Query Frame = 1
Query:    4 ASADDFFLQCNGKHFNSFEESTCRVVFVSTTTFDLN--PPAAAVPSTNGPAHGVPALVTVIPSSFEGSTNAAAGAATXXXXXTMEDSDSTLNSDSPPSTLVHSTLRFSPVTKPAHGNGAAVVAGAAGTSMPTLSPEASEHGASTCVICMERME---SRVLTTVCNHSFHVECLVKWQDSPCPVCRFHHNNASEAST---------CQECQATDNLWVCLICGSVLCGSRHEDHVLGHYGSTLHAYAIEIETQQVWDFAGDGFVHRLIRNKADGKLVEISDPGQT 813
            +SA +F+ + NG+ ++S E   C VV++ +  F  +  PP A  P  + P+         +PS    ++       TXXXX  +  SD+   S + P+     T   SPV  P          GA  T+     P        TC +C++RM+   S +LT VC+H+FH  CL KW DS CPVCR+    +S A+          C EC +TDNLW+CLICG++ CG   E H   H+G T H YA+E+ETQ+VWD+AGDG+VHRLI+N+ DGKLVE+  P +T
Sbjct:  321 SSAQEFYKEYNGREYSSLEPEMCHVVYIKSVEFKSHAIPPYAFPPLPDDPSS------LFLPSRLVTTST------TXXXXTAISYSDT--RSSTAPADDATETRLTSPVKSPT---------GAVTTTQLLELP--------TCPVCLDRMDASASGLLTIVCHHTFHCHCLSKWGDSSCPVCRYSSKFSSSATDPDDDDMLNECMECGSTDNLWICLICGNIGCGRYQEGHAQSHFGETQHLYAMELETQRVWDYAGDGYVHRLIQNRTDGKLVELPAPSRT 573          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig71669.14840.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FPZ1_ECTSI4.370e-10861.49Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K0J5_9PHAE1.010e-10161.56Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YPP8_9STRA3.370e-5958.82Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
H3GNL2_PHYRM3.390e-4937.76Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A1Z5K2I6_FISSO9.670e-4851.50BRCA1-associated protein n=2 Tax=Fistulifera solar... [more]
A0A662YFP2_9STRA1.190e-4752.08Uncharacterized protein n=1 Tax=Nothophytophthora ... [more]
A0A8K1CCW0_PYTOL2.200e-4753.57Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A7S1CIL5_9STRA4.470e-4753.62Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
W2PVR5_PHYPN9.590e-4751.39Uncharacterized protein n=8 Tax=Phytophthora paras... [more]
A0A507E5E2_9FUNG1.270e-4638.73Uncharacterized protein n=1 Tax=Powellomyces hirtu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig71669contigH-elongata_contig71669:205..1752 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score338.2
Seed ortholog evalue3.8e-90
Seed eggNOG ortholog2880.D7FPZ1
KEGG koko:K00413,ko:K10632
KEGG Pathwayko00190,ko01100,ko02020,ko04014,ko04260,ko04714,ko04932,ko05010,ko05012,ko05016,map00190,map01100,map02020,map04014,map04260,map04714,map04932,map05010,map05012,map05016
KEGG ModuleM00151,M00152
GOsGO:0000151,GO:0000165,GO:0003674,GO:0003824,GO:0004842,GO:0005048,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005737,GO:0005829,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0007154,GO:0007165,GO:0007264,GO:0007265,GO:0008139,GO:0008150,GO:0008152,GO:0008270,GO:0009636,GO:0009966,GO:0009968,GO:0009987,GO:0010033,GO:0010646,GO:0010648,GO:0012505,GO:0016020,GO:0016310,GO:0016567,GO:0016740,GO:0019538,GO:0019787,GO:0023014,GO:0023051,GO:0023052,GO:0023057,GO:0031090,GO:0031965,GO:0031967,GO:0031975,GO:0032182,GO:0032446,GO:0032991,GO:0033218,GO:0035556,GO:0036211,GO:0042221,GO:0042277,GO:0042493,GO:0042802,GO:0043130,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0045471,GO:0046677,GO:0046872,GO:0046914,GO:0048519,GO:0048523,GO:0048583,GO:0048585,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0061630,GO:0061659,GO:0065007,GO:0070647,GO:0071704,GO:0097305,GO:0140096,GO:1901564,GO:1901700,GO:1902494,GO:1990234
EggNOG free text desc.nuclear localization sequence binding
EggNOG OGsKOG0804@1,KOG0804@2759
EC2.3.2.27
COG Functional cat.GO
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko04121
Hectar predicted targeting categoryother localisation
Exons3
Model size858
Cds size858
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig71669.14840.1prot_H-elongata_contig71669.14840.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig71669 205..1752 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931117.920565-CDS-H-elongata_contig71669:204..3531622931117.920565-CDS-H-elongata_contig71669:204..353Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig71669 205..353 -
1691679705.5541284-CDS-H-elongata_contig71669:204..3531691679705.5541284-CDS-H-elongata_contig71669:204..353Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig71669 205..353 -
1622931117.9421692-CDS-H-elongata_contig71669:550..6771622931117.9421692-CDS-H-elongata_contig71669:550..677Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig71669 551..677 -
1691679705.5715382-CDS-H-elongata_contig71669:550..6771691679705.5715382-CDS-H-elongata_contig71669:550..677Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig71669 551..677 -
1622931117.9623702-CDS-H-elongata_contig71669:1170..17521622931117.9623702-CDS-H-elongata_contig71669:1170..1752Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig71669 1171..1752 -
1691679705.5830166-CDS-H-elongata_contig71669:1170..17521691679705.5830166-CDS-H-elongata_contig71669:1170..1752Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig71669 1171..1752 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig71669.14840.1

>prot_H-elongata_contig71669.14840.1 ID=prot_H-elongata_contig71669.14840.1|Name=mRNA_H-elongata_contig71669.14840.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=286bp
QASADDFFLQCNGKHFNSFEESTCRVVFVSTTTFDLNPPAAAVPSTNGPA
HGVPALVTVIPSSFEGSTNAAAGAATAATAATMEDSDSTLNSDSPPSTLV
HSTLRFSPVTKPAHGNGAAVVAGAAGTSMPTLSPEASEHGASTCVICMER
MESRVLTTVCNHSFHVECLVKWQDSPCPVCRFHHNNASEASTCQECQATD
NLWVCLICGSVLCGSRHEDHVLGHYGSTLHAYAIEIETQQVWDFAGDGFV
HRLIRNKADGKLVEISDPGQTSKERPQVPARLSDIQ
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mRNA from alignment at H-elongata_contig71669:205..1752-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig71669.14840.1 ID=mRNA_H-elongata_contig71669.14840.1|Name=mRNA_H-elongata_contig71669.14840.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1548bp|location=Sequence derived from alignment at H-elongata_contig71669:205..1752- (Himanthalia elongata Himel1 dioecious)
CAGGCCAGCGCAGACGATTTCTTTCTCCAGTGCAACGGCAAGCACTTCAA CAGCTTCGAGGAGTCCACCTGTCGAGTCGTCTTCGTTTCCACAACGACCT TCGACCTAAACCCACCAGCGGCGGCAGTTCCATCCACAAATGGCCCCGCC CACGGAGTGCCCGCTCTGGTGACCGTGATACCTTCCTCCTTCGAGGGCTC CACAAACGCCGCTGCTGGTGCCGCCACCGCCGCCACCGCCGCCACTATGG AGGACTCTGACAGTACGCTAAATAGCGATTCTCCGCCTTCTACGTTAGTG CACTCGACCTTGCGCTTTTCACCGGTGACGAAGCCTGCGCACGGAAACGG GGCAGCGGTGGTAGCAGGGGCGGCCGGCACGTCGATGCCGACGTTGTCCC CAGAGGCGTCGGAGCACGGCGCTTCGACGTGCGTGATATGCATGGAACGG ATGGAGTCTCGGGTGCTGACGACAGTATGTAACCACAGCTTTCACGTCGA GTGCCTGGTCAAGTGGCAGGATAGCCCCTGCCCCGTGTGTCGGTTTCATC ACAACAACGCTAGTGAGGCCTCGACATGCCAGGTGCGGTGTATTTTCGTT TTGTGTGCGTGTGTTGAGGTGTTTAAATTTGTTGTGGCTGGCGGATGCTT CGGGCTTCCCCTCATTTTGTCTCTTGAAGGGGGATTGGTGGTTTTAATCG TGTAGAGTCAGCATCGATCCGTTCAGTTGGGACGGAGTGGGTTCGACGCT GCTCATGTGGCCCTTGATAAACGCATGAATCGCCTCTTGATGCAGTTATG GACGCCACGTGCGCGGACGGAAGAATCTCGTTCATTCGAATGTACACACG AAGAGTTAGGTCGTTCCTCGCCTTCTATTCTACGTTGCCTATCCACGGAA CTATCCACGGAACGTTCCCCTGGTGCAAGTACGGACTTTTTCGTTTGCCG ACAAGGAATCCCCGTTGTGTGCGTCTATGCGCAGCCGCCGAGCCGCAGTA ATCAATCCCAGCCAATCCCTCGAAGAAACCTGTTCGCGCCCAATTGTCCC ATCGGGCTCGTGTAACATGTGGCAGGAGTGTCAGGCGACGGACAACCTGT GGGTCTGCTTGATCTGTGGTAGCGTTCTCTGCGGCTCTCGTCACGAGGAC CACGTACTGGGGCACTACGGCAGCACCCTGCACGCCTACGCCATCGAGAT AGGTGCGTTATGTCCTCCGTGCGGAGTAAGTGAGATTGATTTTCGATTTA TCAATATGAAACTACCCTCGATACTCTCTGGCTTCGTACGAGTAGACCTC CGCGATAACCCATTCGGTATCGTGCGCGCGATTATTTTTGTGAGAATCGA ATCGTATCGAATCGTATCATACTGTGCCGTGCGTGCGATCCAAGCGCAGA AACGCAACAAGTGTGGGACTTCGCCGGTGACGGTTTCGTGCACCGCCTCA TCCGCAACAAGGCGGATGGGAAACTCGTGGAGATATCAGACCCCGGGCAG ACCTCGAAGGAGCGCCCGCAGGTCCCCGCCCGTCTCTCGGACATCCAG
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Coding sequence (CDS) from alignment at H-elongata_contig71669:205..1752-

>mRNA_H-elongata_contig71669.14840.1 ID=mRNA_H-elongata_contig71669.14840.1|Name=mRNA_H-elongata_contig71669.14840.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1716bp|location=Sequence derived from alignment at H-elongata_contig71669:205..1752- (Himanthalia elongata Himel1 dioecious)
CAGGCCAGCGCAGACGATTTCTTTCTCCAGTGCAACGGCAAGCACTTCAA
CAGCTTCGAGGAGTCCACCTGTCGAGTCGTCTTCGTTTCCACAACGACCT
TCGACCTAAACCCACCAGCGGCGGCAGTTCCATCCACAAATGGCCCCGCC
CACGGAGTGCCCGCTCTGGTGACCGTGATACCTTCCTCCTTCGAGGGCTC
CACAAACGCCGCTGCTGGTGCCGCCACCGCCGCCACCGCCGCCACTATGG
AGGACTCTGACAGTACGCTAAATAGCGATTCTCCGCCTTCTACGTTAGTG
CACTCGACCTTGCGCTTTTCACCGGTGACGAAGCCTGCGCACGGAAACGG
GGCAGCGGTGGTAGCAGGGGCGGCCGGCACGTCGATGCCGACGTTGTCCC
CAGAGGCGTCGGAGCACGGCGCTTCGACGTGCGTGATATGCATGGAACGG
ATGGAGTCTCGGGTGCTGACGACAGTATGTAACCACAGCTTTCACGTCGA
GTGCCTGGTCAAGTGGCAGGATAGCCCCTGCCCCGTGTGTCGGTTTCATC
ACAACAACGCTAGTGAGGCCTCGACATGCCAGCAGGCCAGCGCAGACGAT
TTCTTTCTCCAGTGCAACGGCAAGCACTTCAACAGCTTCGAGGAGTCCAC
CTGTCGAGTCGTCTTCGTTTCCACAACGACCTTCGACCTAAACCCACCAG
CGGCGGCAGTTCCATCCACAAATGGCCCCGCCCACGGAGTGCCCGCTCTG
GTGACCGTGATACCTTCCTCCTTCGAGGGCTCCACAAACGCCGCTGCTGG
TGCCGCCACCGCCGCCACCGCCGCCACTATGGAGGACTCTGACAGTACGC
TAAATAGCGATTCTCCGCCTTCTACGTTAGTGCACTCGACCTTGCGCTTT
TCACCGGTGACGAAGCCTGCGCACGGAAACGGGGCAGCGGTGGTAGCAGG
GGCGGCCGGCACGTCGATGCCGACGTTGTCCCCAGAGGCGTCGGAGCACG
GCGCTTCGACGTGCGTGATATGCATGGAACGGATGGAGTCTCGGGTGCTG
ACGACAGTATGTAACCACAGCTTTCACGTCGAGTGCCTGGTCAAGTGGCA
GGATAGCCCCTGCCCCGTGTGTCGGTTTCATCACAACAACGCTAGTGAGG
CCTCGACATGCCAGGAGTGTCAGGCGACGGACAACCTGTGGGTCTGCTTG
ATCTGTGGTAGCGTTCTCTGCGGCTCTCGTCACGAGGACCACGTACTGGG
GCACTACGGCAGCACCCTGCACGCCTACGCCATCGAGATAGGAGTGTCAG
GCGACGGACAACCTGTGGGTCTGCTTGATCTGTGGTAGCGTTCTCTGCGG
CTCTCGTCACGAGGACCACGTACTGGGGCACTACGGCAGCACCCTGCACG
CCTACGCCATCGAGATAGAAACGCAACAAGTGTGGGACTTCGCCGGTGAC
GGTTTCGTGCACCGCCTCATCCGCAACAAGGCGGATGGGAAACTCGTGGA
GATATCAGACCCCGGGCAGACCTCGAAGGAGCGCCCGCAGGTCCCCGCCC
GTCTCTCGGACATCCAGAAACGCAACAAGTGTGGGACTTCGCCGGTGACG
GTTTCGTGCACCGCCTCATCCGCAACAAGGCGGATGGGAAACTCGTGGAG
ATATCAGACCCCGGGCAGACCTCGAAGGAGCGCCCGCAGGTCCCCGCCCG
TCTCTCGGACATCCAG
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