mRNA_H-elongata_contig71345.14795.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig71345.14795.1 vs. uniprot
Match: D8LQT2_ECTSI (Robl_LC7 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQT2_ECTSI) HSP 1 Score: 196 bits (498), Expect = 8.810e-63 Identity = 102/122 (83.61%), Postives = 107/122 (87.70%), Query Frame = 1
Query: 1 SQQVNEVEEVIKELKTNPGFSAYVIMNNEGIVIKYESMEYQAAVHHAALVLDLVRKSKKYMRELFEPPDNDVESLRLRTGEHEMIIALHDNFTLVVVQQDPGANKKVAREEEGVEGEEDKKD 366
SQQVNEVEEVIKELKTNPGFSAYVIMNN+GIVIKYESMEY+AAVHHAALVLDL KSKKYMRELFEPPDNDVESLRLRTGEHEMIIALH++FTLVVVQQDP EGEE+KKD
Sbjct: 3 SQQVNEVEEVIKELKTNPGFSAYVIMNNDGIVIKYESMEYRAAVHHAALVLDLASKSKKYMRELFEPPDNDVESLRLRTGEHEMIIALHESFTLVVVQQDPNXXXXXXXXXXXXEGEEEKKD 124
BLAST of mRNA_H-elongata_contig71345.14795.1 vs. uniprot
Match: A0A835ZE71_9STRA (Robl_LC7 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE71_9STRA) HSP 1 Score: 174 bits (442), Expect = 3.210e-54 Identity = 90/120 (75.00%), Postives = 101/120 (84.17%), Query Frame = 1
Query: 7 QVNEVEEVIKELKTNPGFSAYVIMNNEGIVIKYESMEYQAAVHHAALVLDLVRKSKKYMRELFEPPDNDVESLRLRTGEHEMIIALHDNFTLVVVQQDPGANKKVAREEEGVEGEEDKKD 366
Q NEVEEVIKELK NPGFSAYV+MNN+GIVIKYESM YQ AVHHAALVLDLV K KKYMRE+FEPPDN+VESLRLRT EHEMI+A H+NFTLVV+Q+DP K + E E EE+KK+
Sbjct: 10 QPNEVEEVIKELKKNPGFSAYVVMNNDGIVIKYESMSYQTAVHHAALVLDLVAKGKKYMREMFEPPDNEVESLRLRTEEHEMIVAQHENFTLVVIQEDP----KWKLKREAQEAEEEKKE 125
BLAST of mRNA_H-elongata_contig71345.14795.1 vs. uniprot
Match: A0A7S2XUU9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XUU9_9STRA) HSP 1 Score: 159 bits (402), Expect = 3.280e-48 Identity = 82/115 (71.30%), Postives = 97/115 (84.35%), Query Frame = 1
Query: 1 SQQVNEVEEVIKELKTNPGFSAYVIMNNEGIVIKYESMEYQAAVHHAALVLDLVRKSKKYMRELFEPPDNDVESLRLRTGEHEMIIALHDNFTLVVVQQDPGANKKVAREEEGVE 345
SQQ NEVEEVI+ELK NPGF AYVIMNN+GIVIKYE+MEY+ AVHHA LVLDL KSKKY+RELFEPPDN+VESLRLRT ++EMIIA H NFTL V+Q+ + K ++++E VE
Sbjct: 3 SQQPNEVEEVIRELKKNPGFDAYVIMNNDGIVIKYENMEYKTAVHHAHLVLDLCTKSKKYIRELFEPPDNEVESLRLRTADYEMIIAQHGNFTLTVLQK---SQKAMSKKETVVE 114
BLAST of mRNA_H-elongata_contig71345.14795.1 vs. uniprot
Match: A0A6V1PEV3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1PEV3_HETAK) HSP 1 Score: 155 bits (392), Expect = 1.130e-46 Identity = 80/118 (67.80%), Postives = 94/118 (79.66%), Query Frame = 1
Query: 1 SQQVNEVEEVIKELKTNPGFSAYVIMNNEGIVIKYESMEYQAAVHHAALVLDLVRKSKKYMRELFEPPDNDVESLRLRTGEHEMIIALHDNFTLVVVQQDPGANKKVAREEEGVEGEE 354
SQQ NEVEEVIKELK NPGF YV+MNN+GIVIK E+MEY+ AVHHA LVLDL KS+KYMR+L +PPDN+VES+RLRT ++EMIIA HDNFTLVV+Q+ A EEE + EE
Sbjct: 3 SQQPNEVEEVIKELKQNPGFDGYVVMNNDGIVIKCENMEYKTAVHHAHLVLDLCAKSRKYMRDLLDPPDNEVESIRLRTIDYEMIIAQHDNFTLVVIQKSHRAMNMPVEEEEDEKKEE 120
BLAST of mRNA_H-elongata_contig71345.14795.1 vs. uniprot
Match: A0A7S1XSZ1_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XSZ1_9STRA) HSP 1 Score: 134 bits (337), Expect = 2.560e-38 Identity = 72/115 (62.61%), Postives = 88/115 (76.52%), Query Frame = 1
Query: 1 SQQVNEVEEVIKELKTNPGFSAYVIMNNEGIVIKYESMEYQAAVHHAALVLDLVRKSKKYMRELFEPPDNDVESLRLRTGEHEMIIALHDNFTLVVVQQDPGANKKVAREEEGVE 345
SQQVNE EEVIKELK PGF +Y+I+NN+GIVIK+E+M+Y++A+ A LVLDLV KSKKY+RELFE PDN+VESLRLR+ E+I+A H +FTLVV Q K EEE E
Sbjct: 3 SQQVNEAEEVIKELKMVPGFHSYMILNNDGIVIKWENMQYRSAIQCAHLVLDLVAKSKKYIRELFEVPDNEVESLRLRSKNFELIVAQHGSFTLVVKQLSQLEMAKPPEEEEDGE 117
BLAST of mRNA_H-elongata_contig71345.14795.1 vs. uniprot
Match: A0A7S2SQX1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SQX1_9STRA) HSP 1 Score: 132 bits (331), Expect = 2.150e-37 Identity = 73/122 (59.84%), Postives = 92/122 (75.41%), Query Frame = 1
Query: 1 SQQVNEVEEVIKELKTNPGFSAYVIMNNEGIVIKYESMEYQAAVHHAALVLDLVRKSKKYMRELFEPPDNDVESLRLRTGEHEMIIALHDNFTLVVVQQDPGANKKVAREEEGVEGEEDKKD 366
S Q NEV+EVI+ELK N GF +YVI+ N+GIVIKYE+M+ Q AV A LVLDL KSKKY++ELFEPPDNDVESLRL+T E EMI+A + +++LVVVQ ++ + EGEE+KKD
Sbjct: 3 SNQTNEVDEVIRELKQNQGFKSYVIIRNDGIVIKYENMDVQKAVQTAHLVLDLCAKSKKYIKELFEPPDNDVESLRLKTLEFEMIVAQYGDYSLVVVQD----TEQHEDADAPGEGEEEKKD 120
BLAST of mRNA_H-elongata_contig71345.14795.1 vs. uniprot
Match: A0A6S8XD14_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S8XD14_9STRA) HSP 1 Score: 124 bits (312), Expect = 1.770e-34 Identity = 64/116 (55.17%), Postives = 86/116 (74.14%), Query Frame = 1
Query: 1 SQQVNEVEEVIKELKTNPGFSAYVIMNNEGIVIKYES----MEYQAAVHHAALVLDLVRKSKKYMRELFEPPDNDVESLRLRTGEHEMIIALHDNFTLVVVQQDPGANKKVAREEE 336
SQQ+NEVEE++KEL+ NPGF AY+I+NN+GIVIK++ M YQ AV ++ VLDL KSK ++++LFEP DN VE++RLRT E+E+I A NFTLVV+Q+D K + EE
Sbjct: 3 SQQINEVEEMLKELRKNPGFKAYLILNNDGIVIKWDQEGSPMPYQKAVQYSHHVLDLCNKSKAHIKDLFEPQDNQVENIRLRTDEYELIAAQQANFTLVVIQEDETKAKTKEKREE 118
BLAST of mRNA_H-elongata_contig71345.14795.1 vs. uniprot
Match: A0A7S2C4Y6_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2C4Y6_9STRA) HSP 1 Score: 120 bits (302), Expect = 5.500e-33 Identity = 63/111 (56.76%), Postives = 81/111 (72.97%), Query Frame = 1
Query: 7 QVNEVEEVIKELKTNPGFSAYVIMNNEGIVIKYESMEYQAAVHHAALVLDLVRKSKKYMRELFEPPDNDVESLRLRTGEHEMIIALHDNFTLVVVQQ---DPGANKKVARE 330
Q N+V+EVI +LK+N G YVI+NN+GIVIKYE M+Y AV HA LVLDL KSK Y R +FE P+N+VES+RL+T E EMII+ NFTLV++Q P +++VA E
Sbjct: 5 QPNQVDEVIHDLKSNVGAKQYVILNNDGIVIKYEGMDYSRAVQHAYLVLDLCAKSKSYFRGMFEAPENEVESIRLKTNEFEMIISQIQNFTLVMIQDTRPQPEEDEEVAAE 115
BLAST of mRNA_H-elongata_contig71345.14795.1 vs. uniprot
Match: H3H541_PHYRM (Robl_LC7 domain-containing protein n=19 Tax=Phytophthora TaxID=4783 RepID=H3H541_PHYRM) HSP 1 Score: 118 bits (295), Expect = 9.580e-32 Identity = 57/96 (59.38%), Postives = 80/96 (83.33%), Query Frame = 1
Query: 13 NEVEEVIKELKTNPGFSAYVIMNNEGIVIKYESMEYQAAVHHAALVLDLVRKSKKYMRELF-EPPDNDVESLRLRTGEHEMIIALHDNFTLVVVQQ 297
NE+EEVIK+LK+ PGFS+Y++MNN+GIV+KYE++EY+ A+ HA VL L ++KK++++LF +P D+++E LRLRT HEMIIA H FTLVV+QQ
Sbjct: 7 NEIEEVIKQLKSKPGFSSYILMNNDGIVVKYENVEYKEAIMHAYHVLSLYGRTKKHLQKLFPDPSDSEIEWLRLRTKMHEMIIAQHLRFTLVVLQQ 102
BLAST of mRNA_H-elongata_contig71345.14795.1 vs. uniprot
Match: T0S3Y7_SAPDV (Robl_LC7 domain-containing protein n=4 Tax=Saprolegniaceae TaxID=4764 RepID=T0S3Y7_SAPDV) HSP 1 Score: 117 bits (293), Expect = 1.530e-31 Identity = 59/103 (57.28%), Postives = 76/103 (73.79%), Query Frame = 1
Query: 13 NEVEEVIKELKTNPGFSAYVIMNNEGIVIKYESMEYQAAVHHAALVLDLVRKSKKYMRELFEPPDNDVESLRLRTGEHEMIIALHDNFTLVVVQQDPGANKKV 321
NEVEE IK LK PGF +Y++MNN+GIVIKYE+MEY+ AV HA +L+L +SKKY+ +LF+ ++D+E LRLRT HEMIIA + FTLVV+Q KV
Sbjct: 7 NEVEETIKALKAKPGFFSYIVMNNDGIVIKYENMEYKMAVMHAYHILNLYARSKKYLTKLFDAAESDIECLRLRTKLHEMIIAQYAKFTLVVLQVSETEEVKV 109 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig71345.14795.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig71345.14795.1 >prot_H-elongata_contig71345.14795.1 ID=prot_H-elongata_contig71345.14795.1|Name=mRNA_H-elongata_contig71345.14795.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=123bp SQQVNEVEEVIKELKTNPGFSAYVIMNNEGIVIKYESMEYQAAVHHAALVback to top mRNA from alignment at H-elongata_contig71345:629..2165+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig71345.14795.1 ID=mRNA_H-elongata_contig71345.14795.1|Name=mRNA_H-elongata_contig71345.14795.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1537bp|location=Sequence derived from alignment at H-elongata_contig71345:629..2165+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig71345:629..2165+ >mRNA_H-elongata_contig71345.14795.1 ID=mRNA_H-elongata_contig71345.14795.1|Name=mRNA_H-elongata_contig71345.14795.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=738bp|location=Sequence derived from alignment at H-elongata_contig71345:629..2165+ (Himanthalia elongata Himel1 dioecious)back to top |