prot_H-elongata_contig71345.14795.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig71345.14795.1
Unique Nameprot_H-elongata_contig71345.14795.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length123
Homology
BLAST of mRNA_H-elongata_contig71345.14795.1 vs. uniprot
Match: D8LQT2_ECTSI (Robl_LC7 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQT2_ECTSI)

HSP 1 Score: 196 bits (498), Expect = 8.810e-63
Identity = 102/122 (83.61%), Postives = 107/122 (87.70%), Query Frame = 0
Query:    1 SQQVNEVEEVIKELKTNPGFSAYVIMNNEGIVIKYESMEYQAAVHHAALVLDLVRKSKKYMRELFEPPDNDVESLRLRTGEHEMIIALHDNFTLVVVQQDPGANKKVAREEEGVEGEEDKKD 122
            SQQVNEVEEVIKELKTNPGFSAYVIMNN+GIVIKYESMEY+AAVHHAALVLDL  KSKKYMRELFEPPDNDVESLRLRTGEHEMIIALH++FTLVVVQQDP             EGEE+KKD
Sbjct:    3 SQQVNEVEEVIKELKTNPGFSAYVIMNNDGIVIKYESMEYRAAVHHAALVLDLASKSKKYMRELFEPPDNDVESLRLRTGEHEMIIALHESFTLVVVQQDPNXXXXXXXXXXXXEGEEEKKD 124          
BLAST of mRNA_H-elongata_contig71345.14795.1 vs. uniprot
Match: A0A835ZE71_9STRA (Robl_LC7 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE71_9STRA)

HSP 1 Score: 174 bits (442), Expect = 3.210e-54
Identity = 90/120 (75.00%), Postives = 101/120 (84.17%), Query Frame = 0
Query:    3 QVNEVEEVIKELKTNPGFSAYVIMNNEGIVIKYESMEYQAAVHHAALVLDLVRKSKKYMRELFEPPDNDVESLRLRTGEHEMIIALHDNFTLVVVQQDPGANKKVAREEEGVEGEEDKKD 122
            Q NEVEEVIKELK NPGFSAYV+MNN+GIVIKYESM YQ AVHHAALVLDLV K KKYMRE+FEPPDN+VESLRLRT EHEMI+A H+NFTLVV+Q+DP    K   + E  E EE+KK+
Sbjct:   10 QPNEVEEVIKELKKNPGFSAYVVMNNDGIVIKYESMSYQTAVHHAALVLDLVAKGKKYMREMFEPPDNEVESLRLRTEEHEMIVAQHENFTLVVIQEDP----KWKLKREAQEAEEEKKE 125          
BLAST of mRNA_H-elongata_contig71345.14795.1 vs. uniprot
Match: A0A7S2XUU9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XUU9_9STRA)

HSP 1 Score: 159 bits (402), Expect = 3.280e-48
Identity = 82/115 (71.30%), Postives = 97/115 (84.35%), Query Frame = 0
Query:    1 SQQVNEVEEVIKELKTNPGFSAYVIMNNEGIVIKYESMEYQAAVHHAALVLDLVRKSKKYMRELFEPPDNDVESLRLRTGEHEMIIALHDNFTLVVVQQDPGANKKVAREEEGVE 115
            SQQ NEVEEVI+ELK NPGF AYVIMNN+GIVIKYE+MEY+ AVHHA LVLDL  KSKKY+RELFEPPDN+VESLRLRT ++EMIIA H NFTL V+Q+   + K ++++E  VE
Sbjct:    3 SQQPNEVEEVIRELKKNPGFDAYVIMNNDGIVIKYENMEYKTAVHHAHLVLDLCTKSKKYIRELFEPPDNEVESLRLRTADYEMIIAQHGNFTLTVLQK---SQKAMSKKETVVE 114          
BLAST of mRNA_H-elongata_contig71345.14795.1 vs. uniprot
Match: A0A6V1PEV3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1PEV3_HETAK)

HSP 1 Score: 155 bits (392), Expect = 1.130e-46
Identity = 80/118 (67.80%), Postives = 94/118 (79.66%), Query Frame = 0
Query:    1 SQQVNEVEEVIKELKTNPGFSAYVIMNNEGIVIKYESMEYQAAVHHAALVLDLVRKSKKYMRELFEPPDNDVESLRLRTGEHEMIIALHDNFTLVVVQQDPGANKKVAREEEGVEGEE 118
            SQQ NEVEEVIKELK NPGF  YV+MNN+GIVIK E+MEY+ AVHHA LVLDL  KS+KYMR+L +PPDN+VES+RLRT ++EMIIA HDNFTLVV+Q+   A      EEE  + EE
Sbjct:    3 SQQPNEVEEVIKELKQNPGFDGYVVMNNDGIVIKCENMEYKTAVHHAHLVLDLCAKSRKYMRDLLDPPDNEVESIRLRTIDYEMIIAQHDNFTLVVIQKSHRAMNMPVEEEEDEKKEE 120          
BLAST of mRNA_H-elongata_contig71345.14795.1 vs. uniprot
Match: A0A7S1XSZ1_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XSZ1_9STRA)

HSP 1 Score: 134 bits (337), Expect = 2.560e-38
Identity = 72/115 (62.61%), Postives = 88/115 (76.52%), Query Frame = 0
Query:    1 SQQVNEVEEVIKELKTNPGFSAYVIMNNEGIVIKYESMEYQAAVHHAALVLDLVRKSKKYMRELFEPPDNDVESLRLRTGEHEMIIALHDNFTLVVVQQDPGANKKVAREEEGVE 115
            SQQVNE EEVIKELK  PGF +Y+I+NN+GIVIK+E+M+Y++A+  A LVLDLV KSKKY+RELFE PDN+VESLRLR+   E+I+A H +FTLVV Q       K   EEE  E
Sbjct:    3 SQQVNEAEEVIKELKMVPGFHSYMILNNDGIVIKWENMQYRSAIQCAHLVLDLVAKSKKYIRELFEVPDNEVESLRLRSKNFELIVAQHGSFTLVVKQLSQLEMAKPPEEEEDGE 117          
BLAST of mRNA_H-elongata_contig71345.14795.1 vs. uniprot
Match: A0A7S2SQX1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SQX1_9STRA)

HSP 1 Score: 132 bits (331), Expect = 2.150e-37
Identity = 73/122 (59.84%), Postives = 92/122 (75.41%), Query Frame = 0
Query:    1 SQQVNEVEEVIKELKTNPGFSAYVIMNNEGIVIKYESMEYQAAVHHAALVLDLVRKSKKYMRELFEPPDNDVESLRLRTGEHEMIIALHDNFTLVVVQQDPGANKKVAREEEGVEGEEDKKD 122
            S Q NEV+EVI+ELK N GF +YVI+ N+GIVIKYE+M+ Q AV  A LVLDL  KSKKY++ELFEPPDNDVESLRL+T E EMI+A + +++LVVVQ      ++    +   EGEE+KKD
Sbjct:    3 SNQTNEVDEVIRELKQNQGFKSYVIIRNDGIVIKYENMDVQKAVQTAHLVLDLCAKSKKYIKELFEPPDNDVESLRLKTLEFEMIVAQYGDYSLVVVQD----TEQHEDADAPGEGEEEKKD 120          
BLAST of mRNA_H-elongata_contig71345.14795.1 vs. uniprot
Match: A0A6S8XD14_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S8XD14_9STRA)

HSP 1 Score: 124 bits (312), Expect = 1.770e-34
Identity = 64/116 (55.17%), Postives = 86/116 (74.14%), Query Frame = 0
Query:    1 SQQVNEVEEVIKELKTNPGFSAYVIMNNEGIVIKYES----MEYQAAVHHAALVLDLVRKSKKYMRELFEPPDNDVESLRLRTGEHEMIIALHDNFTLVVVQQDPGANKKVAREEE 112
            SQQ+NEVEE++KEL+ NPGF AY+I+NN+GIVIK++     M YQ AV ++  VLDL  KSK ++++LFEP DN VE++RLRT E+E+I A   NFTLVV+Q+D    K   + EE
Sbjct:    3 SQQINEVEEMLKELRKNPGFKAYLILNNDGIVIKWDQEGSPMPYQKAVQYSHHVLDLCNKSKAHIKDLFEPQDNQVENIRLRTDEYELIAAQQANFTLVVIQEDETKAKTKEKREE 118          
BLAST of mRNA_H-elongata_contig71345.14795.1 vs. uniprot
Match: A0A7S2C4Y6_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2C4Y6_9STRA)

HSP 1 Score: 120 bits (302), Expect = 5.500e-33
Identity = 63/111 (56.76%), Postives = 81/111 (72.97%), Query Frame = 0
Query:    3 QVNEVEEVIKELKTNPGFSAYVIMNNEGIVIKYESMEYQAAVHHAALVLDLVRKSKKYMRELFEPPDNDVESLRLRTGEHEMIIALHDNFTLVVVQQ---DPGANKKVARE 110
            Q N+V+EVI +LK+N G   YVI+NN+GIVIKYE M+Y  AV HA LVLDL  KSK Y R +FE P+N+VES+RL+T E EMII+   NFTLV++Q     P  +++VA E
Sbjct:    5 QPNQVDEVIHDLKSNVGAKQYVILNNDGIVIKYEGMDYSRAVQHAYLVLDLCAKSKSYFRGMFEAPENEVESIRLKTNEFEMIISQIQNFTLVMIQDTRPQPEEDEEVAAE 115          
BLAST of mRNA_H-elongata_contig71345.14795.1 vs. uniprot
Match: H3H541_PHYRM (Robl_LC7 domain-containing protein n=19 Tax=Phytophthora TaxID=4783 RepID=H3H541_PHYRM)

HSP 1 Score: 118 bits (295), Expect = 9.580e-32
Identity = 57/96 (59.38%), Postives = 80/96 (83.33%), Query Frame = 0
Query:    5 NEVEEVIKELKTNPGFSAYVIMNNEGIVIKYESMEYQAAVHHAALVLDLVRKSKKYMRELF-EPPDNDVESLRLRTGEHEMIIALHDNFTLVVVQQ 99
            NE+EEVIK+LK+ PGFS+Y++MNN+GIV+KYE++EY+ A+ HA  VL L  ++KK++++LF +P D+++E LRLRT  HEMIIA H  FTLVV+QQ
Sbjct:    7 NEIEEVIKQLKSKPGFSSYILMNNDGIVVKYENVEYKEAIMHAYHVLSLYGRTKKHLQKLFPDPSDSEIEWLRLRTKMHEMIIAQHLRFTLVVLQQ 102          
BLAST of mRNA_H-elongata_contig71345.14795.1 vs. uniprot
Match: T0S3Y7_SAPDV (Robl_LC7 domain-containing protein n=4 Tax=Saprolegniaceae TaxID=4764 RepID=T0S3Y7_SAPDV)

HSP 1 Score: 117 bits (293), Expect = 1.530e-31
Identity = 59/103 (57.28%), Postives = 76/103 (73.79%), Query Frame = 0
Query:    5 NEVEEVIKELKTNPGFSAYVIMNNEGIVIKYESMEYQAAVHHAALVLDLVRKSKKYMRELFEPPDNDVESLRLRTGEHEMIIALHDNFTLVVVQQDPGANKKV 107
            NEVEE IK LK  PGF +Y++MNN+GIVIKYE+MEY+ AV HA  +L+L  +SKKY+ +LF+  ++D+E LRLRT  HEMIIA +  FTLVV+Q       KV
Sbjct:    7 NEVEETIKALKAKPGFFSYIVMNNDGIVIKYENMEYKMAVMHAYHILNLYARSKKYLTKLFDAAESDIECLRLRTKLHEMIIAQYAKFTLVVLQVSETEEVKV 109          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig71345.14795.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQT2_ECTSI8.810e-6383.61Robl_LC7 domain-containing protein n=1 Tax=Ectocar... [more]
A0A835ZE71_9STRA3.210e-5475.00Robl_LC7 domain-containing protein n=1 Tax=Tribone... [more]
A0A7S2XUU9_9STRA3.280e-4871.30Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A6V1PEV3_HETAK1.130e-4667.80Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S1XSZ1_9STRA2.560e-3862.61Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A7S2SQX1_9STRA2.150e-3759.84Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A6S8XD14_9STRA1.770e-3455.17Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A7S2C4Y6_9STRA5.500e-3356.76Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
H3H541_PHYRM9.580e-3259.38Robl_LC7 domain-containing protein n=19 Tax=Phytop... [more]
T0S3Y7_SAPDV1.530e-3157.28Robl_LC7 domain-containing protein n=4 Tax=Saprole... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004942Roadblock/LAMTOR2 domainSMARTSM00960Robl_LC7_a_2coord: 7..98
e-value: 1.0E-7
score: 41.6
IPR004942Roadblock/LAMTOR2 domainPFAMPF03259Robl_LC7coord: 7..98
e-value: 5.9E-14
score: 51.6
NoneNo IPR availableGENE3D3.30.450.30coord: 1..101
e-value: 2.8E-25
score: 90.2
NoneNo IPR availablePANTHERPTHR10779DYNEIN LIGHT CHAIN ROADBLOCKcoord: 2..106
NoneNo IPR availablePANTHERPTHR10779:SF18coord: 2..106
NoneNo IPR availableSUPERFAMILY103196Roadblock/LC7 domaincoord: 5..99

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig71345contigH-elongata_contig71345:629..2165 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig71345.14795.1mRNA_H-elongata_contig71345.14795.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig71345 629..2165 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig71345.14795.1 ID=prot_H-elongata_contig71345.14795.1|Name=mRNA_H-elongata_contig71345.14795.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=123bp
SQQVNEVEEVIKELKTNPGFSAYVIMNNEGIVIKYESMEYQAAVHHAALV
LDLVRKSKKYMRELFEPPDNDVESLRLRTGEHEMIIALHDNFTLVVVQQD
PGANKKVAREEEGVEGEEDKKD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004942Roadblock/LAMTOR2_dom