mRNA_H-elongata_contig690.14542.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig690.14542.1 vs. uniprot
Match: D8LH79_ECTSI (Lactoylglutathione lyase, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH79_ECTSI) HSP 1 Score: 218 bits (556), Expect = 7.190e-68 Identity = 114/219 (52.05%), Postives = 135/219 (61.64%), Query Frame = 3
Query: 87 ANQQGRPFKIIGLQQIAIGGVDKKALARLWIDMLGVKKIDTYENQVKPSACVGIRASCPAHVRSTTVPCSASINTAVSSRIFEAQQKSSTSETRIMYVPLASPGIAWNIFKNENVCEDILKVGRGLRAVELDLMEPLDPDKSPKVHVPALNHIGLWVHPLPECVEWLTEKGMRFAPGGIRKGASGHDVAFIHPKGNADHPLSGEGVLIELVQAPPEVIA 743
++ Q RPFKI+GLQQ+AIGG++KKALARLW D LGV+K+ +YE+ K ENV EDILK+G G+ AVE+DLMEPLDP P+V PALNHIGLWVHPLPECVEWLT +GMRF PGGIR+GASGHDVAFIHPKG+ + PLSGEGVLIELVQAPP+++A
Sbjct: 22 SSLQERPFKILGLQQVAIGGLEKKALARLWSDTLGVEKVGSYES------------------------------------------------------------------KKENVREDILKLGHGVNAVEIDLMEPLDPTIPPRVQTPALNHIGLWVHPLPECVEWLTRQGMRFTPGGIRQGASGHDVAFIHPKGDVNFPLSGEGVLIELVQAPPDIVA 174
BLAST of mRNA_H-elongata_contig690.14542.1 vs. uniprot
Match: A0A7S2XWR1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XWR1_9STRA) HSP 1 Score: 204 bits (518), Expect = 4.800e-62 Identity = 114/240 (47.50%), Postives = 138/240 (57.50%), Query Frame = 3
Query: 36 ATSLIPLVAPMICRCFSANQQGRPFKIIGLQQIAIGGVDKKALARLWIDMLGVKKIDTYENQVKPSACVGIRASCPAHVRSTTVPCSASINTAVSSRIFEAQQKSSTSETRIMYVPLASPGIAWNIFKNENVCEDILKVGRGLRAVELDLMEPLDPDKSPKVHVPALNHIGLWVHPLPECVEWLTEKGMRFAPGGIRKGASGHDVAFIHPKGNADHPLSGEGVLIELVQAPPEVIA-FDK 752
AT LI + R FSA RPF+++GLQQ+AIGG+DKK L LW D+LG++++ T+++Q ENV EDI +G+G AVELDLM PLDP+ +PKVH+P LNHIG+WV PLP VEWLT+KGMRF PGGIR+GASGHDV FIHPKGN PLSG+GVL+ELVQAPPEVIA FDK
Sbjct: 13 ATQLIKGSSHFTIRSFSAGS--RPFRVLGLQQVAIGGLDKKPLTDLWGDLLGLEEVGTFKSQ------------------------------------------------------------------KENVDEDIFHLGKGPTAVELDLMAPLDPNVAPKVHMPPLNHIGIWVDPLPAAVEWLTQKGMRFTPGGIRRGASGHDVCFIHPKGNEKTPLSGQGVLLELVQAPPEVIAEFDK 184
BLAST of mRNA_H-elongata_contig690.14542.1 vs. uniprot
Match: A0A520XXI8_9ACTN (VOC family protein n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A520XXI8_9ACTN) HSP 1 Score: 195 bits (495), Expect = 6.300e-59 Identity = 105/220 (47.73%), Postives = 126/220 (57.27%), Query Frame = 3
Query: 90 NQQGRPFKIIGLQQIAIGGVDKKALARLWIDMLGVKKIDTYENQVKPSACVGIRASCPAHVRSTTVPCSASINTAVSSRIFEAQQKSSTSETRIMYVPLASPGIAWNIFKNENVCEDILKVGRGLRAVELDLMEPLDPDKSPKVHVPALNHIGLWVHPLPECVEWLTEKGMRFAPGGIRKGASGHDVAFIHPKGNADHPLSGEGVLIELVQAPPEVIAFD 749
+ RPF+++GLQQIAIGG+D AL+ LW+D LGV K+ Y TSE+ ENV EDIL++G G AVE+DLM+PLDPD PKVH P+LNHIGLWV LP VEWLTEKGMRF PGGIR GA+GHD+ F+HPKGN + P+SGEGVLIELVQAP E++A D
Sbjct: 2 TENARPFRVLGLQQIAIGGLDLAALSALWVDTLGVAKVGEY-----------------------------------------------TSES-------------------ENVREDILRLGEGPHAVEVDLMQPLDPDARPKVHEPSLNHIGLWVDDLPAAVEWLTEKGMRFTPGGIRPGAAGHDIVFVHPKGNNEFPISGEGVLIELVQAPAELLAGD 155
BLAST of mRNA_H-elongata_contig690.14542.1 vs. uniprot
Match: A0A4R7I4B0_9ACTN (Lactoylglutathione lyase n=1 Tax=Ilumatobacter fluminis TaxID=467091 RepID=A0A4R7I4B0_9ACTN) HSP 1 Score: 194 bits (494), Expect = 7.110e-59 Identity = 101/214 (47.20%), Postives = 125/214 (58.41%), Query Frame = 3
Query: 102 RPFKIIGLQQIAIGGVDKKALARLWIDMLGVKKIDTYENQVKPSACVGIRASCPAHVRSTTVPCSASINTAVSSRIFEAQQKSSTSETRIMYVPLASPGIAWNIFKNENVCEDILKVGRGLRAVELDLMEPLDPDKSPKVHVPALNHIGLWVHPLPECVEWLTEKGMRFAPGGIRKGASGHDVAFIHPKGNADHPLSGEGVLIELVQAPPEVIA 743
RPFK++G+QQIAIGG+DK AL LW + G++K+ Y + ++ENV EDIL++G G AVE+DLM+PLDP++SPKVHVP LNH+GLW+ LP VEWLTE+GMRF PGGIRKGASG+DV F+HPKGN + P SGEGVLIELVQAPPEV+A
Sbjct: 3 RPFKVLGIQQIAIGGLDKGALTGLWSGLFGIEKVGDY------------------------------------------------------------------VSESENVDEDILRLGSGPHAVEIDLMQPLDPERSPKVHVPTLNHVGLWIDDLPAAVEWLTEQGMRFTPGGIRKGASGYDVCFLHPKGNDETPRSGEGVLIELVQAPPEVVA 150
BLAST of mRNA_H-elongata_contig690.14542.1 vs. uniprot
Match: A0A2D8GHU3_9ACTN (Lactoylglutathione lyase n=5 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2D8GHU3_9ACTN) HSP 1 Score: 190 bits (482), Expect = 4.900e-57 Identity = 104/214 (48.60%), Postives = 123/214 (57.48%), Query Frame = 3
Query: 102 RPFKIIGLQQIAIGGVDKKALARLWIDMLGVKKIDTYENQVKPSACVGIRASCPAHVRSTTVPCSASINTAVSSRIFEAQQKSSTSETRIMYVPLASPGIAWNIFKNENVCEDILKVGRGLRAVELDLMEPLDPDKSPKVHVPALNHIGLWVHPLPECVEWLTEKGMRFAPGGIRKGASGHDVAFIHPKGNADHPLSGEGVLIELVQAPPEVIA 743
RPF+++GLQQIAIGG+D AL RLW+D LGV+K Y TSE+ ENV EDIL++G G AVE+DLM+PLDP+ PKVH P+LNH+GLWV LP VEWLTE GMRF PGGIR GA+GHD+ F+HPKGN + PLSGEGVLIELVQAP +VIA
Sbjct: 5 RPFRVLGLQQIAIGGLDLGALRRLWVDTLGVEKAGEY-----------------------------------------------TSES-------------------ENVQEDILRLGSGEHAVEIDLMQPLDPESRPKVHDPSLNHVGLWVDDLPAAVEWLTEHGMRFTPGGIRPGAAGHDIVFVHPKGNDEFPLSGEGVLIELVQAPDDVIA 152
BLAST of mRNA_H-elongata_contig690.14542.1 vs. uniprot
Match: A0A1D2S720_9BURK (Lactoylglutathione lyase n=2 Tax=Comamonas TaxID=283 RepID=A0A1D2S720_9BURK) HSP 1 Score: 189 bits (481), Expect = 6.500e-57 Identity = 99/214 (46.26%), Postives = 121/214 (56.54%), Query Frame = 3
Query: 102 RPFKIIGLQQIAIGGVDKKALARLWIDMLGVKKIDTYENQVKPSACVGIRASCPAHVRSTTVPCSASINTAVSSRIFEAQQKSSTSETRIMYVPLASPGIAWNIFKNENVCEDILKVGRGLRAVELDLMEPLDPDKSPKVHVPALNHIGLWVHPLPECVEWLTEKGMRFAPGGIRKGASGHDVAFIHPKGNADHPLSGEGVLIELVQAPPEVIA 743
RPFK++G+QQ+AIGG DK AL RLW+D LG+ D++ ++ ENV EDIL +GRG VE+DLM+PLDP K P VH+P LNHIGLW+ LP V+WL+ +GMRFAPGGIRKGA+G+DV FIHP+GN PLSGEGVL+ELVQAPPEVIA
Sbjct: 3 RPFKVLGIQQVAIGGTDKAALRRLWVDTLGLAHTDSFASE------------------------------------------------------------------RENVDEDILAMGRGATKVEIDLMQPLDPAKKPAVHIPPLNHIGLWIDDLPSAVQWLSVQGMRFAPGGIRKGAAGYDVCFIHPRGNEQFPLSGEGVLLELVQAPPEVIA 150
BLAST of mRNA_H-elongata_contig690.14542.1 vs. uniprot
Match: A0A6C7ECZ4_ILUCY (Putative methylmalonyl CoA epimerase n=1 Tax=Ilumatobacter coccineus (strain NBRC 103263 / KCTC 29153 / YM16-304) TaxID=1313172 RepID=A0A6C7ECZ4_ILUCY) HSP 1 Score: 189 bits (480), Expect = 9.490e-57 Identity = 99/214 (46.26%), Postives = 123/214 (57.48%), Query Frame = 3
Query: 102 RPFKIIGLQQIAIGGVDKKALARLWIDMLGVKKIDTYENQVKPSACVGIRASCPAHVRSTTVPCSASINTAVSSRIFEAQQKSSTSETRIMYVPLASPGIAWNIFKNENVCEDILKVGRGLRAVELDLMEPLDPDKSPKVHVPALNHIGLWVHPLPECVEWLTEKGMRFAPGGIRKGASGHDVAFIHPKGNADHPLSGEGVLIELVQAPPEVIA 743
RPF ++G+QQ+AIGG+DK AL LW +LGV+K+ Y + ++ENV EDIL++G G AVE+DLM+P+DP+KSPKVH P LNH+GLW+ LP V+WLTE+GMRF PGGIRKGASGHDV F+HPKGN + P SGEGVLIELVQAP +VIA
Sbjct: 4 RPFNVLGIQQVAIGGLDKGALTDLWSGLLGVEKVGDY------------------------------------------------------------------VAESENVDEDILRLGSGPHAVEIDLMQPIDPEKSPKVHSPTLNHLGLWIDDLPAAVDWLTEQGMRFTPGGIRKGASGHDVCFMHPKGNDESPRSGEGVLIELVQAPADVIA 151
BLAST of mRNA_H-elongata_contig690.14542.1 vs. uniprot
Match: A0A835ZFN3_9STRA (Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFN3_9STRA) HSP 1 Score: 189 bits (480), Expect = 3.310e-56 Identity = 107/249 (42.97%), Postives = 139/249 (55.82%), Query Frame = 3
Query: 6 NTSLHQPLALATSLIPLVAPMICRCFSANQQGRPFKIIGLQQIAIGGVDKKALARLWIDMLGVKKIDTYENQVKPSACVGIRASCPAHVRSTTVPCSASINTAVSSRIFEAQQKSSTSETRIMYVPLASPGIAWNIFKNENVCEDILKVGRGLRAVELDLMEPLDPDKSPKVHVPALNHIGLWVHPLPECVEWLTEKGMRFAPGGIRKGASGHDVAFIHPKGNADHPLSGEGVLIELVQAPPEVIA-FD 749
++ L A+ T+ + + R + +++ RPF+++G+QQ+AIG + KKAL LW +LGV + +Y + K ENV EDIL++G G AVE+DLMEPLDP+ PKVHVP+LNHIG+WV PL + VE+LT KG+RF PGGIRKGA+G++V FIHPKGNAD PLSGEGVLIELVQ PPEVIA FD
Sbjct: 8 SSLLRTSSAVGTATLARPMTIAVRHMATDKEQRPFRVLGMQQVAIGALKKKALLDLWCGVLGVPQTGSYTS------------------------------------------------------------------KGENVNEDILRLGEGPFAVEIDLMEPLDPNVPPKVHVPSLNHIGIWVDPLDKAVEYLTAKGVRFTPGGIRKGAAGYNVTFIHPKGNADKPLSGEGVLIELVQPPPEVIAAFD 190
BLAST of mRNA_H-elongata_contig690.14542.1 vs. uniprot
Match: A0A2E8PV34_9SPIO (Lactoylglutathione lyase n=4 Tax=Spirochaetia TaxID=203692 RepID=A0A2E8PV34_9SPIO) HSP 1 Score: 187 bits (475), Expect = 5.390e-56 Identity = 97/213 (45.54%), Postives = 124/213 (58.22%), Query Frame = 3
Query: 102 RPFKIIGLQQIAIGGVDKKALARLWIDMLGVKKIDTYENQVKPSACVGIRASCPAHVRSTTVPCSASINTAVSSRIFEAQQKSSTSETRIMYVPLASPGIAWNIFKNENVCEDILKVGRGLRAVELDLMEPLDPDKSPKVHVPALNHIGLWVHPLPECVEWLTEKGMRFAPGGIRKGASGHDVAFIHPKGNADHPLSGEGVLIELVQAPPEVI 740
RPF+I+G+QQIAIGG DK LA LW+DM G++K +Y+++ ENV EDIL++G G A+E+D+M+P+DP+K+PKVHVP LNHIGLWV L + VE++T KGMRF PGGIRKGA+GH+V FIHPKGN + P+SGEGVLIELVQAP +VI
Sbjct: 4 RPFRILGIQQIAIGGTDKGKLANLWVDMFGLEKTSSYQSE------------------------------------------------------------------KENVDEDILRIGSGPHAIEVDIMQPIDPEKAPKVHVPPLNHIGLWVDDLEKAVEYMTAKGMRFTPGGIRKGAAGHNVCFIHPKGNDEFPMSGEGVLIELVQAPEDVI 150
BLAST of mRNA_H-elongata_contig690.14542.1 vs. uniprot
Match: A0A6G0W6E2_9STRA (VOC domain-containing protein n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A6G0W6E2_9STRA) HSP 1 Score: 187 bits (476), Expect = 5.780e-56 Identity = 104/234 (44.44%), Postives = 139/234 (59.40%), Query Frame = 3
Query: 54 LVAPMICRCFSANQQGRPFKIIGLQQIAIGGVDKKALARLWIDMLGVKKIDTYENQVKPSACVGIRASCPAHVRSTTVPCSASINTAVSSRIFEAQQKSSTSETRIMYVPLASPGIAWNIFKNENVCEDILKVGRGLRAVELDLMEPLDPDKSPKVHVPALNHIGLWVHPLPECVEWLTEKGMRFAPGGIRKGASGHDVAFIHPKGNADHPLSGEGVLIELVQAPPEVI-AFDK 752
++A + R FS++ RPF+++G+QQ+AIGG++K+AL+ LW+D LG+ TY++ + + ENV EDIL+ GRG AVE+D+M+P+DP+++PKVHVP LNHIGLW+ LP+ VE LT++GMRF PGGIRKGA+G+DV FIHPKGN PLSGEGVLIELVQAPP VI AF+K
Sbjct: 1 MLASLARRAFSSST--RPFRVLGIQQVAIGGLNKEALSNLWVDTLGL----TYKSSFRS--------------------------------------------------------------ERENVDEDILEAGRGPFAVEVDIMQPIDPNRAPKVHVPQLNHIGLWIDDLPKAVESLTQQGMRFTPGGIRKGAAGYDVVFIHPKGNDQFPLSGEGVLIELVQAPPHVIEAFEK 166 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig690.14542.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig690.14542.1 >prot_H-elongata_contig690.14542.1 ID=prot_H-elongata_contig690.14542.1|Name=mRNA_H-elongata_contig690.14542.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=232bp MICRCFSANQQGRPFKIIGLQQIAIGGVDKKALARLWIDMLGVKKIDTYEback to top mRNA from alignment at H-elongata_contig690:3070..4852- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig690.14542.1 ID=mRNA_H-elongata_contig690.14542.1|Name=mRNA_H-elongata_contig690.14542.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1783bp|location=Sequence derived from alignment at H-elongata_contig690:3070..4852- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig690:3070..4852- >mRNA_H-elongata_contig690.14542.1 ID=mRNA_H-elongata_contig690.14542.1|Name=mRNA_H-elongata_contig690.14542.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1392bp|location=Sequence derived from alignment at H-elongata_contig690:3070..4852- (Himanthalia elongata Himel1 dioecious)back to top |