mRNA_H-elongata_contig690.14542.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig690.14542.1
Unique NamemRNA_H-elongata_contig690.14542.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig690.14542.1 vs. uniprot
Match: D8LH79_ECTSI (Lactoylglutathione lyase, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH79_ECTSI)

HSP 1 Score: 218 bits (556), Expect = 7.190e-68
Identity = 114/219 (52.05%), Postives = 135/219 (61.64%), Query Frame = 3
Query:   87 ANQQGRPFKIIGLQQIAIGGVDKKALARLWIDMLGVKKIDTYENQVKPSACVGIRASCPAHVRSTTVPCSASINTAVSSRIFEAQQKSSTSETRIMYVPLASPGIAWNIFKNENVCEDILKVGRGLRAVELDLMEPLDPDKSPKVHVPALNHIGLWVHPLPECVEWLTEKGMRFAPGGIRKGASGHDVAFIHPKGNADHPLSGEGVLIELVQAPPEVIA 743
            ++ Q RPFKI+GLQQ+AIGG++KKALARLW D LGV+K+ +YE+                                                                  K ENV EDILK+G G+ AVE+DLMEPLDP   P+V  PALNHIGLWVHPLPECVEWLT +GMRF PGGIR+GASGHDVAFIHPKG+ + PLSGEGVLIELVQAPP+++A
Sbjct:   22 SSLQERPFKILGLQQVAIGGLEKKALARLWSDTLGVEKVGSYES------------------------------------------------------------------KKENVREDILKLGHGVNAVEIDLMEPLDPTIPPRVQTPALNHIGLWVHPLPECVEWLTRQGMRFTPGGIRQGASGHDVAFIHPKGDVNFPLSGEGVLIELVQAPPDIVA 174          
BLAST of mRNA_H-elongata_contig690.14542.1 vs. uniprot
Match: A0A7S2XWR1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XWR1_9STRA)

HSP 1 Score: 204 bits (518), Expect = 4.800e-62
Identity = 114/240 (47.50%), Postives = 138/240 (57.50%), Query Frame = 3
Query:   36 ATSLIPLVAPMICRCFSANQQGRPFKIIGLQQIAIGGVDKKALARLWIDMLGVKKIDTYENQVKPSACVGIRASCPAHVRSTTVPCSASINTAVSSRIFEAQQKSSTSETRIMYVPLASPGIAWNIFKNENVCEDILKVGRGLRAVELDLMEPLDPDKSPKVHVPALNHIGLWVHPLPECVEWLTEKGMRFAPGGIRKGASGHDVAFIHPKGNADHPLSGEGVLIELVQAPPEVIA-FDK 752
            AT LI   +    R FSA    RPF+++GLQQ+AIGG+DKK L  LW D+LG++++ T+++Q                                                                   ENV EDI  +G+G  AVELDLM PLDP+ +PKVH+P LNHIG+WV PLP  VEWLT+KGMRF PGGIR+GASGHDV FIHPKGN   PLSG+GVL+ELVQAPPEVIA FDK
Sbjct:   13 ATQLIKGSSHFTIRSFSAGS--RPFRVLGLQQVAIGGLDKKPLTDLWGDLLGLEEVGTFKSQ------------------------------------------------------------------KENVDEDIFHLGKGPTAVELDLMAPLDPNVAPKVHMPPLNHIGIWVDPLPAAVEWLTQKGMRFTPGGIRRGASGHDVCFIHPKGNEKTPLSGQGVLLELVQAPPEVIAEFDK 184          
BLAST of mRNA_H-elongata_contig690.14542.1 vs. uniprot
Match: A0A520XXI8_9ACTN (VOC family protein n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A520XXI8_9ACTN)

HSP 1 Score: 195 bits (495), Expect = 6.300e-59
Identity = 105/220 (47.73%), Postives = 126/220 (57.27%), Query Frame = 3
Query:   90 NQQGRPFKIIGLQQIAIGGVDKKALARLWIDMLGVKKIDTYENQVKPSACVGIRASCPAHVRSTTVPCSASINTAVSSRIFEAQQKSSTSETRIMYVPLASPGIAWNIFKNENVCEDILKVGRGLRAVELDLMEPLDPDKSPKVHVPALNHIGLWVHPLPECVEWLTEKGMRFAPGGIRKGASGHDVAFIHPKGNADHPLSGEGVLIELVQAPPEVIAFD 749
             +  RPF+++GLQQIAIGG+D  AL+ LW+D LGV K+  Y                                               TSE+                   ENV EDIL++G G  AVE+DLM+PLDPD  PKVH P+LNHIGLWV  LP  VEWLTEKGMRF PGGIR GA+GHD+ F+HPKGN + P+SGEGVLIELVQAP E++A D
Sbjct:    2 TENARPFRVLGLQQIAIGGLDLAALSALWVDTLGVAKVGEY-----------------------------------------------TSES-------------------ENVREDILRLGEGPHAVEVDLMQPLDPDARPKVHEPSLNHIGLWVDDLPAAVEWLTEKGMRFTPGGIRPGAAGHDIVFVHPKGNNEFPISGEGVLIELVQAPAELLAGD 155          
BLAST of mRNA_H-elongata_contig690.14542.1 vs. uniprot
Match: A0A4R7I4B0_9ACTN (Lactoylglutathione lyase n=1 Tax=Ilumatobacter fluminis TaxID=467091 RepID=A0A4R7I4B0_9ACTN)

HSP 1 Score: 194 bits (494), Expect = 7.110e-59
Identity = 101/214 (47.20%), Postives = 125/214 (58.41%), Query Frame = 3
Query:  102 RPFKIIGLQQIAIGGVDKKALARLWIDMLGVKKIDTYENQVKPSACVGIRASCPAHVRSTTVPCSASINTAVSSRIFEAQQKSSTSETRIMYVPLASPGIAWNIFKNENVCEDILKVGRGLRAVELDLMEPLDPDKSPKVHVPALNHIGLWVHPLPECVEWLTEKGMRFAPGGIRKGASGHDVAFIHPKGNADHPLSGEGVLIELVQAPPEVIA 743
            RPFK++G+QQIAIGG+DK AL  LW  + G++K+  Y                                                                  + ++ENV EDIL++G G  AVE+DLM+PLDP++SPKVHVP LNH+GLW+  LP  VEWLTE+GMRF PGGIRKGASG+DV F+HPKGN + P SGEGVLIELVQAPPEV+A
Sbjct:    3 RPFKVLGIQQIAIGGLDKGALTGLWSGLFGIEKVGDY------------------------------------------------------------------VSESENVDEDILRLGSGPHAVEIDLMQPLDPERSPKVHVPTLNHVGLWIDDLPAAVEWLTEQGMRFTPGGIRKGASGYDVCFLHPKGNDETPRSGEGVLIELVQAPPEVVA 150          
BLAST of mRNA_H-elongata_contig690.14542.1 vs. uniprot
Match: A0A2D8GHU3_9ACTN (Lactoylglutathione lyase n=5 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2D8GHU3_9ACTN)

HSP 1 Score: 190 bits (482), Expect = 4.900e-57
Identity = 104/214 (48.60%), Postives = 123/214 (57.48%), Query Frame = 3
Query:  102 RPFKIIGLQQIAIGGVDKKALARLWIDMLGVKKIDTYENQVKPSACVGIRASCPAHVRSTTVPCSASINTAVSSRIFEAQQKSSTSETRIMYVPLASPGIAWNIFKNENVCEDILKVGRGLRAVELDLMEPLDPDKSPKVHVPALNHIGLWVHPLPECVEWLTEKGMRFAPGGIRKGASGHDVAFIHPKGNADHPLSGEGVLIELVQAPPEVIA 743
            RPF+++GLQQIAIGG+D  AL RLW+D LGV+K   Y                                               TSE+                   ENV EDIL++G G  AVE+DLM+PLDP+  PKVH P+LNH+GLWV  LP  VEWLTE GMRF PGGIR GA+GHD+ F+HPKGN + PLSGEGVLIELVQAP +VIA
Sbjct:    5 RPFRVLGLQQIAIGGLDLGALRRLWVDTLGVEKAGEY-----------------------------------------------TSES-------------------ENVQEDILRLGSGEHAVEIDLMQPLDPESRPKVHDPSLNHVGLWVDDLPAAVEWLTEHGMRFTPGGIRPGAAGHDIVFVHPKGNDEFPLSGEGVLIELVQAPDDVIA 152          
BLAST of mRNA_H-elongata_contig690.14542.1 vs. uniprot
Match: A0A1D2S720_9BURK (Lactoylglutathione lyase n=2 Tax=Comamonas TaxID=283 RepID=A0A1D2S720_9BURK)

HSP 1 Score: 189 bits (481), Expect = 6.500e-57
Identity = 99/214 (46.26%), Postives = 121/214 (56.54%), Query Frame = 3
Query:  102 RPFKIIGLQQIAIGGVDKKALARLWIDMLGVKKIDTYENQVKPSACVGIRASCPAHVRSTTVPCSASINTAVSSRIFEAQQKSSTSETRIMYVPLASPGIAWNIFKNENVCEDILKVGRGLRAVELDLMEPLDPDKSPKVHVPALNHIGLWVHPLPECVEWLTEKGMRFAPGGIRKGASGHDVAFIHPKGNADHPLSGEGVLIELVQAPPEVIA 743
            RPFK++G+QQ+AIGG DK AL RLW+D LG+   D++ ++                                                                   ENV EDIL +GRG   VE+DLM+PLDP K P VH+P LNHIGLW+  LP  V+WL+ +GMRFAPGGIRKGA+G+DV FIHP+GN   PLSGEGVL+ELVQAPPEVIA
Sbjct:    3 RPFKVLGIQQVAIGGTDKAALRRLWVDTLGLAHTDSFASE------------------------------------------------------------------RENVDEDILAMGRGATKVEIDLMQPLDPAKKPAVHIPPLNHIGLWIDDLPSAVQWLSVQGMRFAPGGIRKGAAGYDVCFIHPRGNEQFPLSGEGVLLELVQAPPEVIA 150          
BLAST of mRNA_H-elongata_contig690.14542.1 vs. uniprot
Match: A0A6C7ECZ4_ILUCY (Putative methylmalonyl CoA epimerase n=1 Tax=Ilumatobacter coccineus (strain NBRC 103263 / KCTC 29153 / YM16-304) TaxID=1313172 RepID=A0A6C7ECZ4_ILUCY)

HSP 1 Score: 189 bits (480), Expect = 9.490e-57
Identity = 99/214 (46.26%), Postives = 123/214 (57.48%), Query Frame = 3
Query:  102 RPFKIIGLQQIAIGGVDKKALARLWIDMLGVKKIDTYENQVKPSACVGIRASCPAHVRSTTVPCSASINTAVSSRIFEAQQKSSTSETRIMYVPLASPGIAWNIFKNENVCEDILKVGRGLRAVELDLMEPLDPDKSPKVHVPALNHIGLWVHPLPECVEWLTEKGMRFAPGGIRKGASGHDVAFIHPKGNADHPLSGEGVLIELVQAPPEVIA 743
            RPF ++G+QQ+AIGG+DK AL  LW  +LGV+K+  Y                                                                  + ++ENV EDIL++G G  AVE+DLM+P+DP+KSPKVH P LNH+GLW+  LP  V+WLTE+GMRF PGGIRKGASGHDV F+HPKGN + P SGEGVLIELVQAP +VIA
Sbjct:    4 RPFNVLGIQQVAIGGLDKGALTDLWSGLLGVEKVGDY------------------------------------------------------------------VAESENVDEDILRLGSGPHAVEIDLMQPIDPEKSPKVHSPTLNHLGLWIDDLPAAVDWLTEQGMRFTPGGIRKGASGHDVCFMHPKGNDESPRSGEGVLIELVQAPADVIA 151          
BLAST of mRNA_H-elongata_contig690.14542.1 vs. uniprot
Match: A0A835ZFN3_9STRA (Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFN3_9STRA)

HSP 1 Score: 189 bits (480), Expect = 3.310e-56
Identity = 107/249 (42.97%), Postives = 139/249 (55.82%), Query Frame = 3
Query:    6 NTSLHQPLALATSLIPLVAPMICRCFSANQQGRPFKIIGLQQIAIGGVDKKALARLWIDMLGVKKIDTYENQVKPSACVGIRASCPAHVRSTTVPCSASINTAVSSRIFEAQQKSSTSETRIMYVPLASPGIAWNIFKNENVCEDILKVGRGLRAVELDLMEPLDPDKSPKVHVPALNHIGLWVHPLPECVEWLTEKGMRFAPGGIRKGASGHDVAFIHPKGNADHPLSGEGVLIELVQAPPEVIA-FD 749
            ++ L    A+ T+ +     +  R  + +++ RPF+++G+QQ+AIG + KKAL  LW  +LGV +  +Y +                                                                  K ENV EDIL++G G  AVE+DLMEPLDP+  PKVHVP+LNHIG+WV PL + VE+LT KG+RF PGGIRKGA+G++V FIHPKGNAD PLSGEGVLIELVQ PPEVIA FD
Sbjct:    8 SSLLRTSSAVGTATLARPMTIAVRHMATDKEQRPFRVLGMQQVAIGALKKKALLDLWCGVLGVPQTGSYTS------------------------------------------------------------------KGENVNEDILRLGEGPFAVEIDLMEPLDPNVPPKVHVPSLNHIGIWVDPLDKAVEYLTAKGVRFTPGGIRKGAAGYNVTFIHPKGNADKPLSGEGVLIELVQPPPEVIAAFD 190          
BLAST of mRNA_H-elongata_contig690.14542.1 vs. uniprot
Match: A0A2E8PV34_9SPIO (Lactoylglutathione lyase n=4 Tax=Spirochaetia TaxID=203692 RepID=A0A2E8PV34_9SPIO)

HSP 1 Score: 187 bits (475), Expect = 5.390e-56
Identity = 97/213 (45.54%), Postives = 124/213 (58.22%), Query Frame = 3
Query:  102 RPFKIIGLQQIAIGGVDKKALARLWIDMLGVKKIDTYENQVKPSACVGIRASCPAHVRSTTVPCSASINTAVSSRIFEAQQKSSTSETRIMYVPLASPGIAWNIFKNENVCEDILKVGRGLRAVELDLMEPLDPDKSPKVHVPALNHIGLWVHPLPECVEWLTEKGMRFAPGGIRKGASGHDVAFIHPKGNADHPLSGEGVLIELVQAPPEVI 740
            RPF+I+G+QQIAIGG DK  LA LW+DM G++K  +Y+++                                                                   ENV EDIL++G G  A+E+D+M+P+DP+K+PKVHVP LNHIGLWV  L + VE++T KGMRF PGGIRKGA+GH+V FIHPKGN + P+SGEGVLIELVQAP +VI
Sbjct:    4 RPFRILGIQQIAIGGTDKGKLANLWVDMFGLEKTSSYQSE------------------------------------------------------------------KENVDEDILRIGSGPHAIEVDIMQPIDPEKAPKVHVPPLNHIGLWVDDLEKAVEYMTAKGMRFTPGGIRKGAAGHNVCFIHPKGNDEFPMSGEGVLIELVQAPEDVI 150          
BLAST of mRNA_H-elongata_contig690.14542.1 vs. uniprot
Match: A0A6G0W6E2_9STRA (VOC domain-containing protein n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A6G0W6E2_9STRA)

HSP 1 Score: 187 bits (476), Expect = 5.780e-56
Identity = 104/234 (44.44%), Postives = 139/234 (59.40%), Query Frame = 3
Query:   54 LVAPMICRCFSANQQGRPFKIIGLQQIAIGGVDKKALARLWIDMLGVKKIDTYENQVKPSACVGIRASCPAHVRSTTVPCSASINTAVSSRIFEAQQKSSTSETRIMYVPLASPGIAWNIFKNENVCEDILKVGRGLRAVELDLMEPLDPDKSPKVHVPALNHIGLWVHPLPECVEWLTEKGMRFAPGGIRKGASGHDVAFIHPKGNADHPLSGEGVLIELVQAPPEVI-AFDK 752
            ++A +  R FS++   RPF+++G+QQ+AIGG++K+AL+ LW+D LG+    TY++  +                                                               + ENV EDIL+ GRG  AVE+D+M+P+DP+++PKVHVP LNHIGLW+  LP+ VE LT++GMRF PGGIRKGA+G+DV FIHPKGN   PLSGEGVLIELVQAPP VI AF+K
Sbjct:    1 MLASLARRAFSSST--RPFRVLGIQQVAIGGLNKEALSNLWVDTLGL----TYKSSFRS--------------------------------------------------------------ERENVDEDILEAGRGPFAVEVDIMQPIDPNRAPKVHVPQLNHIGLWIDDLPKAVESLTQQGMRFTPGGIRKGAAGYDVVFIHPKGNDQFPLSGEGVLIELVQAPPHVIEAFEK 166          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig690.14542.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LH79_ECTSI7.190e-6852.05Lactoylglutathione lyase, putative n=1 Tax=Ectocar... [more]
A0A7S2XWR1_9STRA4.800e-6247.50Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A520XXI8_9ACTN6.300e-5947.73VOC family protein n=1 Tax=Acidimicrobiales bacter... [more]
A0A4R7I4B0_9ACTN7.110e-5947.20Lactoylglutathione lyase n=1 Tax=Ilumatobacter flu... [more]
A0A2D8GHU3_9ACTN4.900e-5748.60Lactoylglutathione lyase n=5 Tax=Acidimicrobiaceae... [more]
A0A1D2S720_9BURK6.500e-5746.26Lactoylglutathione lyase n=2 Tax=Comamonas TaxID=2... [more]
A0A6C7ECZ4_ILUCY9.490e-5746.26Putative methylmalonyl CoA epimerase n=1 Tax=Iluma... [more]
A0A835ZFN3_9STRA3.310e-5642.97Glyoxalase/Bleomycin resistance protein/Dioxygenas... [more]
A0A2E8PV34_9SPIO5.390e-5645.54Lactoylglutathione lyase n=4 Tax=Spirochaetia TaxI... [more]
A0A6G0W6E2_9STRA5.780e-5644.44VOC domain-containing protein n=2 Tax=Aphanomyces ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig690contigH-elongata_contig690:3070..4852 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score220.7
Seed ortholog evalue7.1e-55
Seed eggNOG ortholog2880.D8LH79
EggNOG free text desc.Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
EggNOG OGs2CXQD@1,2RZ24@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionGlyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
Ec32 orthologEc-24_000860.1
Exons5
Model size928
Cds size696
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931086.900544-UTR-H-elongata_contig690:3069..32361622931086.900544-UTR-H-elongata_contig690:3069..3236Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig690 3070..3236 -
1691679692.5841205-UTR-H-elongata_contig690:3069..32361691679692.5841205-UTR-H-elongata_contig690:3069..3236Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig690 3070..3236 -
1622931087.013557-UTR-H-elongata_contig690:4787..48521622931087.013557-UTR-H-elongata_contig690:4787..4852Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig690 4788..4852 -
1691679692.6496136-UTR-H-elongata_contig690:4787..48521691679692.6496136-UTR-H-elongata_contig690:4787..4852Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig690 4788..4852 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931086.9170432-CDS-H-elongata_contig690:3236..34801622931086.9170432-CDS-H-elongata_contig690:3236..3480Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig690 3237..3480 -
1691679692.5981462-CDS-H-elongata_contig690:3236..34801691679692.5981462-CDS-H-elongata_contig690:3236..3480Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig690 3237..3480 -
1622931086.9327033-CDS-H-elongata_contig690:3788..39731622931086.9327033-CDS-H-elongata_contig690:3788..3973Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig690 3789..3973 -
1691679692.6084352-CDS-H-elongata_contig690:3788..39731691679692.6084352-CDS-H-elongata_contig690:3788..3973Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig690 3789..3973 -
1622931086.9472473-CDS-H-elongata_contig690:4017..41911622931086.9472473-CDS-H-elongata_contig690:4017..4191Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig690 4018..4191 -
1691679692.6183746-CDS-H-elongata_contig690:4017..41911691679692.6183746-CDS-H-elongata_contig690:4017..4191Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig690 4018..4191 -
1622931086.9739034-CDS-H-elongata_contig690:4321..43811622931086.9739034-CDS-H-elongata_contig690:4321..4381Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig690 4322..4381 -
1691679692.629026-CDS-H-elongata_contig690:4321..43811691679692.629026-CDS-H-elongata_contig690:4321..4381Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig690 4322..4381 -
1622931086.996194-CDS-H-elongata_contig690:4754..47871622931086.996194-CDS-H-elongata_contig690:4754..4787Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig690 4755..4787 -
1691679692.6393378-CDS-H-elongata_contig690:4754..47871691679692.6393378-CDS-H-elongata_contig690:4754..4787Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig690 4755..4787 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig690.14542.1prot_H-elongata_contig690.14542.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig690 3237..4787 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig690.14542.1

>prot_H-elongata_contig690.14542.1 ID=prot_H-elongata_contig690.14542.1|Name=mRNA_H-elongata_contig690.14542.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=232bp
MICRCFSANQQGRPFKIIGLQQIAIGGVDKKALARLWIDMLGVKKIDTYE
NQVKPSACVGIRASCPAHVRSTTVPCSASINTAVSSRIFEAQQKSSTSET
RIMYVPLASPGIAWNIFKNENVCEDILKVGRGLRAVELDLMEPLDPDKSP
KVHVPALNHIGLWVHPLPECVEWLTEKGMRFAPGGIRKGASGHDVAFIHP
KGNADHPLSGEGVLIELVQAPPEVIAFDKIQ*
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mRNA from alignment at H-elongata_contig690:3070..4852-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig690.14542.1 ID=mRNA_H-elongata_contig690.14542.1|Name=mRNA_H-elongata_contig690.14542.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1783bp|location=Sequence derived from alignment at H-elongata_contig690:3070..4852- (Himanthalia elongata Himel1 dioecious)
AGAAGAATACTTCACTGCATCAACCGCTGGCTCTGGCTACATCCTTGATA CCGCTTGTTGCCCCGATGATATGCAGATGTTTTTCTGCGAATCAACAGGT GATGCAAGGTGGACGGCTATGCTTTGTTGTTCGTTACTTATACCTACATA ATCAGTATGCTGCTTGCCGTATTTTGAGAAGACATATATATATATATATT ATATATATCCGTTTGTAAGAGTTTAGGAGGACTCGATCGAAGTGTCAATT CAGTAGCAATGGGATCGATTTTACAGAAGATGGGTAGGTGGAGGTGGTAA TCTCCACTTTGTAACGATATCATATTGAGATGAGGCGACTGAGCGATTGA GTCTGTCTTTCGCATCGACTACTGTTACAAGGTAGGAAATCAGTTGCACA TGCCGTTTGAAATCTACTATCTGCACAACAAATGGTTCTGTCTCTCGAAC CCATGCTGACGTTTGTCCCAGGGGCGACCTTTCAAAATTATTGGACTGCA ACAGATTGCCATTGGTGGAGTCGACAAGAAGGTAGAGTATTCGCCTCGAA GATTCCTGATGAAGCAGTACCGAGCGTGCTACATCAGATAGGCACAACAC TATTCAATCACGTCAGCAAAATATTTCATCAAGGCTACTTCGCCCTCCAT GCCAACATCAGGCCCTCGCTCGACTATGGATCGACATGCTTGGCGTGAAG AAAATCGATACCTACGAAAATCAGGTGAAACCAAGCGCTTGCGTAGGAAT TCGAGCCTCTTGTCCAGCCCATGTACGTTCTACAACTGTTCCTTGTTCTG CCTCAATTAATACTGCTGTTTCCTCCAGAATATTTGCTACGCGTGCCCCA TATTCTGAGGCATTTCGAACATCTTGAAGGAGGCACAACAAAAGAGCTCC ACATCAGAGACACGGATCATGTACGTTCCGTTGGCCTCACCCGGTATTGC TTGGAACATTTTCAAGAACGAAAACGTGTGTGAAGATATTTTGAAGGTCG GACGTGGACTAAGGGCCGTCGAGTTGGACTTGATGGAGCCTCTTGATCCA GATAAAAGCCCCAAGTGAGTGGTGGTAATATAGCATGCATTCGCCGAGGT TGATCCAGTGCATCGCCTCGATTTAATATGCGACCGAATGCCACTTTAGC CTATTACTGAGCGGGGCTTCTAAGCCAAAGGGGTTTGCTGCGATTAGTGG CGACGAACGTGTGTCATAAAAACTTGACATACGGTGGTTCTACTATGACC GAATCACCGTTAGGCCCATCGGTAGATTTGGGCTGGTTATGTCATTGATA TTTCCATCACTTTCCTTTATTATACTTTTCGTTTGGGTTCTGATACACCG CTTGACGCTTCATCGCAAACAGGGTGCATGTGCCTGCCTTGAACCACATT GGTCTTTGGGTGCACCCTCTGCCCGAGTGCGTAGAATGGCTAACGGAGAA GGGAATGCGATTTGCACCCGGCGGTATCAGAAAGGGTGCAAGCGGTCACG ATGTTGCCTTCATCCATCCGAAAGGGAATGCCGACCACCCGCTGAGTGGG GAGGGGGTACTGATCGAACTTGTGCAGGCACCACCTGAGGTCATTGCCTT CGACAAGATTCAGTGATCTGTCAATCTGCGCGACGGCAGACGCCAGAGCG AGGAATGTTTGGATTAATTACGAAGTACTATGGAACTTTGTGTCGTCATT GGTTTGCCCCATGAACATCAAACAGAGTTATAGCGCTATCAAAGTACATG ACAAATGGTGGCATCAAGATCAAAATGAAAAAT
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Coding sequence (CDS) from alignment at H-elongata_contig690:3070..4852-

>mRNA_H-elongata_contig690.14542.1 ID=mRNA_H-elongata_contig690.14542.1|Name=mRNA_H-elongata_contig690.14542.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1392bp|location=Sequence derived from alignment at H-elongata_contig690:3070..4852- (Himanthalia elongata Himel1 dioecious)
ATGATATGCAGATGTTTTTCTGCGAATCAACAGATGATATGCAGATGTTT
TTCTGCGAATCAACAGGGGCGACCTTTCAAAATTATTGGACTGCAACAGA
TTGCCATTGGTGGAGTCGACAAGAAGGGGCGACCTTTCAAAATTATTGGA
CTGCAACAGATTGCCATTGGTGGAGTCGACAAGAAGGCCCTCGCTCGACT
ATGGATCGACATGCTTGGCGTGAAGAAAATCGATACCTACGAAAATCAGG
TGAAACCAAGCGCTTGCGTAGGAATTCGAGCCTCTTGTCCAGCCCATGTA
CGTTCTACAACTGTTCCTTGTTCTGCCTCAATTAATACTGCTGTTTCCTC
CAGAATATTTGCCCTCGCTCGACTATGGATCGACATGCTTGGCGTGAAGA
AAATCGATACCTACGAAAATCAGGTGAAACCAAGCGCTTGCGTAGGAATT
CGAGCCTCTTGTCCAGCCCATGTACGTTCTACAACTGTTCCTTGTTCTGC
CTCAATTAATACTGCTGTTTCCTCCAGAATATTTGAGGCACAACAAAAGA
GCTCCACATCAGAGACACGGATCATGTACGTTCCGTTGGCCTCACCCGGT
ATTGCTTGGAACATTTTCAAGAACGAAAACGTGTGTGAAGATATTTTGAA
GGTCGGACGTGGACTAAGGGCCGTCGAGTTGGACTTGATGGAGCCTCTTG
ATCCAGATAAAAGCCCCAAGAGGCACAACAAAAGAGCTCCACATCAGAGA
CACGGATCATGTACGTTCCGTTGGCCTCACCCGGTATTGCTTGGAACATT
TTCAAGAACGAAAACGTGTGTGAAGATATTTTGAAGGTCGGACGTGGACT
AAGGGCCGTCGAGTTGGACTTGATGGAGCCTCTTGATCCAGATAAAAGCC
CCAAGGTGCATGTGCCTGCCTTGAACCACATTGGTCTTTGGGTGCACCCT
CTGCCCGAGTGCGTAGAATGGCTAACGGAGAAGGGAATGCGATTTGCACC
CGGCGGTATCAGAAAGGGTGCAAGCGGTCACGATGTTGCCTTCATCCATC
CGAAAGGGAATGCCGACCACCCGCTGAGTGGGGAGGGGGTACTGATCGAA
CTTGTGCAGGCACCACCTGAGGTCATTGCCTTCGACAAGATTCAGTGAGG
TGCATGTGCCTGCCTTGAACCACATTGGTCTTTGGGTGCACCCTCTGCCC
GAGTGCGTAGAATGGCTAACGGAGAAGGGAATGCGATTTGCACCCGGCGG
TATCAGAAAGGGTGCAAGCGGTCACGATGTTGCCTTCATCCATCCGAAAG
GGAATGCCGACCACCCGCTGAGTGGGGAGGGGGTACTGATCGAACTTGTG
CAGGCACCACCTGAGGTCATTGCCTTCGACAAGATTCAGTGA
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