mRNA_H-elongata_contig689.14531.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig689.14531.1 vs. uniprot
Match: A0A6H5JFG2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFG2_9PHAE) HSP 1 Score: 213 bits (541), Expect = 9.080e-62 Identity = 126/329 (38.30%), Postives = 187/329 (56.84%), Query Frame = 1
Query: 7 ANPCVFRKVADGEVEMVVVIHMDDIIAYTKDHATLYRFVAKLAQKFKLKDMGDVGYYVGCHIMRNRKARELTIDQHFYVESMVETFDVKKASKIPATSGVPTPS-KADEPWNPKVKKEMRRFPYRKAVGVLMWTATMTRLDIASAVCAVTRFSKIPGPAHKKAAMKIM*YLLHTKDWGITYG-GQGCRLCMKAYTDSDFGAWLDTRRSLSGAVLMLAKGAISWYFRMEEVTASGTSEAEYVASSDAVKEVIFLRQGQAFMEPSMRVGAVYVFEDNERVINLPTNKHASRRTKHIDVKHHLARDASDARKVRVAYVRSEDQQPDLLTKPL 987
A+ CVFR + DG V +++V+H+DDI A + +F A L + +K++G++ +Y GC RN++ LTI Q + + + + V +P +SGV ADE V E FP+R+ VG LMW AT TR DIA+AV AV R+ P H AAM I+ Y T +GI++ G ++ Y D+DF + RRS+SG ++ GA+SW+ R ++ T+EAEYVA D VKE++FLRQ FM P + + + VFEDN+ I L N ++ +KHIDV+HH R+ + +++ V +V S Q+ D LTK L
Sbjct: 127 ADACVFRLIEDGCVVLILVVHVDDIFA-VGERERCDKFGADLNKSVPVKNLGELRWYSGCFYERNKETGRLTISQQTFTDELAAEYGVVGGRSVPMSSGVKLSDFDADE-----VATE---FPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKLVHWNAAMDILGYARRTSHFGISFQRGTVEGFSLQGYADADFASKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLRQIWRFMLPQVGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVERKEISVIHVPSPYQRADFLTKSL 446
BLAST of mRNA_H-elongata_contig689.14531.1 vs. uniprot
Match: A0A6H5JWK8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWK8_9PHAE) HSP 1 Score: 205 bits (522), Expect = 8.500e-60 Identity = 119/329 (36.17%), Postives = 189/329 (57.45%), Query Frame = 1
Query: 7 ANPCVFRKVADGEVEMVVVIHMDDIIAY-TKDHATLYRFVAKLAQKFKLKDMGDVGYYVGCHIMRNRKARELTIDQHFYVESMVETFDVKKASKIPATSGVPTPSKADEPWNPKVKKEMRRFPYRKAVGVLMWTATMTRLDIASAVCAVTRFSKIPGPAHKKAAMKIM*YLLHTKDWGITYG-GQGCRLCMKAYTDSDFGAWLDTRRSLSGAVLMLAKGAISWYFRMEEVTASGTSEAEYVASSDAVKEVIFLRQGQAFMEPSMRVGAVYVFEDNERVINLPTNKHASRRTKHIDVKHHLARDASDARKVRVAYVRSEDQQPDLLTKPL 987
A+ CVFR V DGEV +++V+H+DDI A TK+ +F L + +K +G++ +Y GC+ R+R+A LTI Q Y + + E V+ IP +PT + W+ V + +P+R +G L+W A +TR DIA+AV AV R+ P H +AA+ I+ Y + T +GI++ G + + D+D+ + RRS+SG V+M A GAI+W+ + ++ T++AEYVA +D KE++FLR+ FM P + ++EDNE I + + ++ +KHIDV+HH R D ++V + +V S+ Q D LTK L
Sbjct: 49 ADSCVFRLVEDGEVVLILVVHVDDIFAVGTKERCD--QFGKDLGEYVPVKSLGELQWYSGCYYERDREAGRLTISQETYTKELGERHGVEWGGGIP----LPTTWRL---WDSDVNEPSVEYPFRALIGSLLWVALLTRPDIANAVRAVARYCSEPKLIHWRAALGILGYAVRTSSFGISFQRGTVSGFSLITFADADYASRAADRRSVSGGVVMCAGGAIAWFSKTQKCVTLSTTQAEYVAMADMGKEILFLREVWRFMLPKELRPCIPLYEDNEGAIQIAKHPISNSNSKHIDVRHHFLRQLVDEKEVEIIHVASQYQHADFLTKAL 368
BLAST of mRNA_H-elongata_contig689.14531.1 vs. uniprot
Match: A0A6H5JRZ9_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRZ9_9PHAE) HSP 1 Score: 205 bits (521), Expect = 4.450e-59 Identity = 121/329 (36.78%), Postives = 189/329 (57.45%), Query Frame = 1
Query: 7 ANPCVFRKVADGEVEMVVVIHMDDIIAY-TKDHATLYRFVAKLAQKFKLKDMGDVGYYVGCHIMRNRKARELTIDQHFYVESMVETFDVKKASKIPATSGVPTPSKADEPWNPKVKKEMRRFPYRKAVGVLMWTATMTRLDIASAVCAVTRFSKIPGPAHKKAAMKIM*YLLHTKDWGITY-GGQGCRLCMKAYTDSDFGAWLDTRRSLSGAVLMLAKGAISWYFRMEEVTASGTSEAEYVASSDAVKEVIFLRQGQAFMEPSMRVGAVYVFEDNERVINLPTNKHASRRTKHIDVKHHLARDASDARKVRVAYVRSEDQQPDLLTKPL 987
A+ CVFR V +GEV +++V+H+DDI A TK+ +F L + +K +G++ +Y GC+ R+R+A LTI Q Y E + E + V+ IP +PT K W+ + P+R VG L+W A +TR DIA++V AV R+S P H KAA+ I+ Y + T +GI++ G + + ++D+ + RRS+SG V+M A GAI+W+ + ++ T++AEYVA +D KE++FLRQ FM P + ++EDNE I + + ++ +KHIDV+HH R D ++V + +V S+ Q D LTK L
Sbjct: 101 ADSCVFRFVEEGEVVLLLVVHVDDIFAVGTKERCD--QFGKDLGEYVPVKSLGELKWYSGCYYERDREAGRLTISQQTYTEELGERYGVEWGGGIP----LPTTWKL---WDFDADEPSVEHPFRALVGSLLWIALLTRPDIANSVRAVARYSGAPKLIHWKAALSILGYAVRTSSFGISFQSGTVSGFSLITFVNADYASRAADRRSVSGGVVMCAGGAIAWFSKTQKCVTLSTTQAEYVAMADMGKEILFLRQVWRFMLPKELRPCIPLYEDNEGAIQIAKHPISNSNSKHIDVRHHFLRQLVDEKEVEIIHVASQYQHADFLTKAL 420
BLAST of mRNA_H-elongata_contig689.14531.1 vs. uniprot
Match: A0A6H5J4N2_9PHAE (Integrase catalytic domain-containing protein n=18 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J4N2_9PHAE) HSP 1 Score: 213 bits (541), Expect = 3.170e-58 Identity = 126/329 (38.30%), Postives = 187/329 (56.84%), Query Frame = 1
Query: 7 ANPCVFRKVADGEVEMVVVIHMDDIIAYTKDHATLYRFVAKLAQKFKLKDMGDVGYYVGCHIMRNRKARELTIDQHFYVESMVETFDVKKASKIPATSGVPTPS-KADEPWNPKVKKEMRRFPYRKAVGVLMWTATMTRLDIASAVCAVTRFSKIPGPAHKKAAMKIM*YLLHTKDWGITYG-GQGCRLCMKAYTDSDFGAWLDTRRSLSGAVLMLAKGAISWYFRMEEVTASGTSEAEYVASSDAVKEVIFLRQGQAFMEPSMRVGAVYVFEDNERVINLPTNKHASRRTKHIDVKHHLARDASDARKVRVAYVRSEDQQPDLLTKPL 987
A+ CVFR + DG V +++V+H+DDI A + +F A L + +K++G++ +Y GC RN++ LTI Q + + + + V +P +SGV ADE V E FP+R+ VG LMW AT TR DIA+AV AV R+ P H AAM I+ Y T +GI++ G ++ Y D+DF + RRS+SG ++ GA+SW+ R ++ T+EAEYVA D VKE++FLRQ FM P + + + VFEDN+ I L N ++ +KHIDV+HH R+ + +++ V +V S Q+ D LTK L
Sbjct: 1463 ADACVFRLIEDGCVVLILVVHVDDIFA-VGERERCDKFGADLNKSVPVKNLGELRWYSGCFYERNKETGRLTISQQTFTDELAAEYGVVGGRSVPMSSGVKLSDFDADE-----VATE---FPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKLVHWNAAMDILGYARRTSHFGISFQRGTVEGFSLQGYADADFASKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLRQIWRFMLPQVGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVERKEISVIHVPSPYQRADFLTKSL 1782
BLAST of mRNA_H-elongata_contig689.14531.1 vs. uniprot
Match: A0A6H5L867_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L867_9PHAE) HSP 1 Score: 213 bits (541), Expect = 3.180e-58 Identity = 126/329 (38.30%), Postives = 187/329 (56.84%), Query Frame = 1
Query: 7 ANPCVFRKVADGEVEMVVVIHMDDIIAYTKDHATLYRFVAKLAQKFKLKDMGDVGYYVGCHIMRNRKARELTIDQHFYVESMVETFDVKKASKIPATSGVPTPS-KADEPWNPKVKKEMRRFPYRKAVGVLMWTATMTRLDIASAVCAVTRFSKIPGPAHKKAAMKIM*YLLHTKDWGITYG-GQGCRLCMKAYTDSDFGAWLDTRRSLSGAVLMLAKGAISWYFRMEEVTASGTSEAEYVASSDAVKEVIFLRQGQAFMEPSMRVGAVYVFEDNERVINLPTNKHASRRTKHIDVKHHLARDASDARKVRVAYVRSEDQQPDLLTKPL 987
A+ CVFR + DG V +++V+H+DDI A + +F A L + +K++G++ +Y GC RN++ LTI Q + + + + V +P +SGV ADE V E FP+R+ VG LMW AT TR DIA+AV AV R+ P H AAM I+ Y T +GI++ G ++ Y D+DF + RRS+SG ++ GA+SW+ R ++ T+EAEYVA D VKE++FLRQ FM P + + + VFEDN+ I L N ++ +KHIDV+HH R+ + +++ V +V S Q+ D LTK L
Sbjct: 1249 ADACVFRLIEDGCVVLILVVHVDDIFA-VGERERCDKFGADLNKSVPVKNLGELRWYSGCFYERNKETGRLTISQQTFTDELAAEYGVVGGRSVPMSSGVKLSDFDADE-----VATE---FPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKLVHWNAAMDILGYARRTSHFGISFQRGTVEGFSLQGYADADFASKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLRQIWRFMLPQVGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVERKEISVIHVPSPYQRADFLTKSL 1568
BLAST of mRNA_H-elongata_contig689.14531.1 vs. uniprot
Match: A0A6H5KBD4_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBD4_9PHAE) HSP 1 Score: 213 bits (541), Expect = 3.350e-58 Identity = 126/329 (38.30%), Postives = 187/329 (56.84%), Query Frame = 1
Query: 7 ANPCVFRKVADGEVEMVVVIHMDDIIAYTKDHATLYRFVAKLAQKFKLKDMGDVGYYVGCHIMRNRKARELTIDQHFYVESMVETFDVKKASKIPATSGVPTPS-KADEPWNPKVKKEMRRFPYRKAVGVLMWTATMTRLDIASAVCAVTRFSKIPGPAHKKAAMKIM*YLLHTKDWGITYG-GQGCRLCMKAYTDSDFGAWLDTRRSLSGAVLMLAKGAISWYFRMEEVTASGTSEAEYVASSDAVKEVIFLRQGQAFMEPSMRVGAVYVFEDNERVINLPTNKHASRRTKHIDVKHHLARDASDARKVRVAYVRSEDQQPDLLTKPL 987
A+ CVFR + DG V +++V+H+DDI A + +F A L + +K++G++ +Y GC RN++ LTI Q + + + + V +P +SGV ADE V E FP+R+ VG LMW AT TR DIA+AV AV R+ P H AAM I+ Y T +GI++ G ++ Y D+DF + RRS+SG ++ GA+SW+ R ++ T+EAEYVA D VKE++FLRQ FM P + + + VFEDN+ I L N ++ +KHIDV+HH R+ + +++ V +V S Q+ D LTK L
Sbjct: 1317 ADACVFRLIEDGCVVLILVVHVDDIFA-VGERERCDKFGADLNKSVPVKNLGELRWYSGCFYERNKETGRLTISQQTFTDELAAEYGVVGGRSVPMSSGVKLSDFDADE-----VATE---FPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKLVHWNAAMDILGYARRTSHFGISFQRGTVEGFSLQGYADADFASKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLRQIWRFMLPQVGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVERKEISVIHVPSPYQRADFLTKSL 1636
BLAST of mRNA_H-elongata_contig689.14531.1 vs. uniprot
Match: A0A6H5JG40_9PHAE (Integrase catalytic domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG40_9PHAE) HSP 1 Score: 211 bits (538), Expect = 7.350e-58 Identity = 123/329 (37.39%), Postives = 185/329 (56.23%), Query Frame = 1
Query: 7 ANPCVFRKVADGEVEMVVVIHMDDIIAYTKDHATLYRFVAKLAQKFKLKDMGDVGYYVGCHIMRNRKARELTIDQHFYVESMVETFDVKKASKIPATSGVPTPS-KADEPWNPKVKKEMRRFPYRKAVGVLMWTATMTRLDIASAVCAVTRFSKIPGPAHKKAAMKIM*YLLHTKDWGITYG-GQGCRLCMKAYTDSDFGAWLDTRRSLSGAVLMLAKGAISWYFRMEEVTASGTSEAEYVASSDAVKEVIFLRQGQAFMEPSMRVGAVYVFEDNERVINLPTNKHASRRTKHIDVKHHLARDASDARKVRVAYVRSEDQQPDLLTKPL 987
A+ CVFR + DG V +++V+H+DDI A + +F A L + +K++G++ +Y GC RN++ LTI Q + + + + V +P +SGV ADE FP+R+ VG LMW AT TR DIA+AV AV R+ P H AAM I+ Y T +GI++ G ++ Y D+DF + RRS+SG ++ GA+SW+ R ++ T+EAEYVA D VKE++FLRQ FM P + + + +FEDN+ I L N ++ +KHIDV+HH R+ + +++ V +V S Q+ D LTK L
Sbjct: 957 ADACVFRLIEDGCVVLILVVHVDDIFA-VGERERCDKFGADLNKSVPVKNLGELRWYSGCFYERNKETGRLTISQQTFTDELAAEYGVVGGRSVPMSSGVKLSDFDADE--------VATDFPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKLVHWNAAMDILGYARRTSHFGISFQRGTVEGFSLQGYADADFASKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLRQIWRFMLPQVGMPCIPIFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVERKEISVIHVPSPYQRADFLTKSL 1276
BLAST of mRNA_H-elongata_contig689.14531.1 vs. uniprot
Match: A0A6H5KSG8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSG8_9PHAE) HSP 1 Score: 209 bits (533), Expect = 3.340e-57 Identity = 126/329 (38.30%), Postives = 189/329 (57.45%), Query Frame = 1
Query: 4 KANPCVFRKVADGEVEMVVVIHMDDIIAYTKDHATLYRFVAKLAQKFKLKDMGDVGYYVGCHIMRNRKARELTIDQHFYVESMVETFDVKKASKIPATSGVPT-PSKADEPWNPKVKKEMRRFPYRKAVGVLMWTATMTRLDIASAVCAVTRFSKIPGPAHKKAAMKIM*YLLHTKDWGITYGGQGCRLCMKAYTDSDFGAWLDTRRSLSGAVLMLAKGAISWYFRMEEVTASGTSEAEYVASSDAVKEVIFLRQGQAFMEPSMRVGAVYVFEDNERVINLPTNKHASRRTKHIDVKHHLARDASDARKVRVAYVRSEDQQPDLLTKPL 987
KA+PCVFRK+ D V M++VI++DDI+ D +A L +KF K++G+ ++ GC I R+ +A L I Q Y++SMVE FDVK S+IPAT G P + DE E +P R+A+G +MW +T +R D++ AV AV R + P H A KI+ YL T+D GITY +G L + Y D+ + A + RRS+SG + +S + + + + ++EAEY+A+ + VKE +F+R +F+ P ++ V EDN+ I L N +S RTKHIDV++H R + + V +V + +Q DLLTK L
Sbjct: 912 KADPCVFRKMVDEVVVMIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDE--------EGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQ-RGSGLGLAVYVDASY-ADTEDRRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIKVLEDNQGAIALVQNPLSSGRTKHIDVRYHFIRGLFRSGDISVKFVPTTEQHADLLTKAL 1229
BLAST of mRNA_H-elongata_contig689.14531.1 vs. uniprot
Match: A0A6H5JZQ8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ8_9PHAE) HSP 1 Score: 209 bits (533), Expect = 3.640e-57 Identity = 126/329 (38.30%), Postives = 189/329 (57.45%), Query Frame = 1
Query: 4 KANPCVFRKVADGEVEMVVVIHMDDIIAYTKDHATLYRFVAKLAQKFKLKDMGDVGYYVGCHIMRNRKARELTIDQHFYVESMVETFDVKKASKIPATSGVPT-PSKADEPWNPKVKKEMRRFPYRKAVGVLMWTATMTRLDIASAVCAVTRFSKIPGPAHKKAAMKIM*YLLHTKDWGITYGGQGCRLCMKAYTDSDFGAWLDTRRSLSGAVLMLAKGAISWYFRMEEVTASGTSEAEYVASSDAVKEVIFLRQGQAFMEPSMRVGAVYVFEDNERVINLPTNKHASRRTKHIDVKHHLARDASDARKVRVAYVRSEDQQPDLLTKPL 987
KA+PCVFRK+ D V M++VI++DDI+ D +A L +KF K++G+ ++ GC I R+ +A L I Q Y++SMVE FDVK S+IPAT G P + DE E +P R+A+G +MW +T +R D++ AV AV R + P H A KI+ YL T+D GITY +G L + Y D+ + A + RRS+SG + +S + + + + ++EAEY+A+ + VKE +F+R +F+ P ++ V EDN+ I L N +S RTKHIDV++H R + + V +V + +Q DLLTK L
Sbjct: 1291 KADPCVFRKMVDEVVVMIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDE--------EGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQ-RGSGLGLAVYVDASY-ADTEDRRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIKVLEDNQGAIALVQNPLSSGRTKHIDVRYHFIRGLFRSGDISVKFVPTTEQHADLLTKAL 1608
BLAST of mRNA_H-elongata_contig689.14531.1 vs. uniprot
Match: A0A6H5JN00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN00_9PHAE) HSP 1 Score: 209 bits (533), Expect = 3.670e-57 Identity = 126/329 (38.30%), Postives = 189/329 (57.45%), Query Frame = 1
Query: 4 KANPCVFRKVADGEVEMVVVIHMDDIIAYTKDHATLYRFVAKLAQKFKLKDMGDVGYYVGCHIMRNRKARELTIDQHFYVESMVETFDVKKASKIPATSGVPT-PSKADEPWNPKVKKEMRRFPYRKAVGVLMWTATMTRLDIASAVCAVTRFSKIPGPAHKKAAMKIM*YLLHTKDWGITYGGQGCRLCMKAYTDSDFGAWLDTRRSLSGAVLMLAKGAISWYFRMEEVTASGTSEAEYVASSDAVKEVIFLRQGQAFMEPSMRVGAVYVFEDNERVINLPTNKHASRRTKHIDVKHHLARDASDARKVRVAYVRSEDQQPDLLTKPL 987
KA+PCVFRK+ D V M++VI++DDI+ D +A L +KF K++G+ ++ GC I R+ +A L I Q Y++SMVE FDVK S+IPAT G P + DE E +P R+A+G +MW +T +R D++ AV AV R + P H A KI+ YL T+D GITY +G L + Y D+ + A + RRS+SG + +S + + + + ++EAEY+A+ + VKE +F+R +F+ P ++ V EDN+ I L N +S RTKHIDV++H R + + V +V + +Q DLLTK L
Sbjct: 1311 KADPCVFRKMVDQVVVMIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDE--------EGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQ-RGSGLGLAVYVDASY-ADTEDRRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIKVLEDNQGAIALVQNPLSSGRTKHIDVRYHFIRGLFRSGDISVKFVPTTEQHADLLTKAL 1628 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig689.14531.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig689.14531.1 >prot_H-elongata_contig689.14531.1 ID=prot_H-elongata_contig689.14531.1|Name=mRNA_H-elongata_contig689.14531.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=153bp MVVVIHMDDIIAYTKDHATLYRFVAKLAQKFKLKDMGDVGYYVGCHIMRNback to top mRNA from alignment at H-elongata_contig689:5925..6911+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig689.14531.1 ID=mRNA_H-elongata_contig689.14531.1|Name=mRNA_H-elongata_contig689.14531.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=987bp|location=Sequence derived from alignment at H-elongata_contig689:5925..6911+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig689:5925..6911+ >mRNA_H-elongata_contig689.14531.1 ID=mRNA_H-elongata_contig689.14531.1|Name=mRNA_H-elongata_contig689.14531.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=918bp|location=Sequence derived from alignment at H-elongata_contig689:5925..6911+ (Himanthalia elongata Himel1 dioecious)back to top |