mRNA_H-elongata_contig68504.14486.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig68504.14486.1 vs. uniprot
Match: D8LC01_ECTSI (Thioredoxin domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LC01_ECTSI) HSP 1 Score: 151 bits (381), Expect = 6.390e-42 Identity = 70/101 (69.31%), Postives = 83/101 (82.18%), Query Frame = 1
Query: 7 LLGDMLRDSGGTDVPTSSSLEGKVVGLYFSASWCGPCRGFTPQLIKTYDAVRSAGKEFEVVLIGSDKKRDDFVRYHQKMPWLAVPFEDRLGQRSRWNCFFV 309
LLG L+DS DVPT+++LEGKVV YFSASWCGPCRGFTPQL+KTY+AVR+AGKEFEVVLIGSD+K DDF+ YH++MPWLA+PF DR + S F V
Sbjct: 6 LLGPSLKDSAENDVPTAAALEGKVVAFYFSASWCGPCRGFTPQLVKTYNAVRAAGKEFEVVLIGSDRKEDDFLLYHKEMPWLALPFPDRERKSSLSTKFRV 106
BLAST of mRNA_H-elongata_contig68504.14486.1 vs. uniprot
Match: A0A6T0B168_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A6T0B168_CHRCT) HSP 1 Score: 109 bits (272), Expect = 3.570e-26 Identity = 49/89 (55.06%), Postives = 64/89 (71.91%), Query Frame = 1
Query: 7 LLGDMLRDSGGTDVPTSSSLEGKVVGLYFSASWCGPCRGFTPQLIKTYDAVRSAGKEFEVVLIGSDKKRDDFVRYHQKMPWLAVPFEDR 273
LLG L + G ++ T +L+GK+VGLYFSA WC PCRGFTP L++TY +++AGK FE+V + SDK + F Y +MPWLAVPF DR
Sbjct: 5 LLGKSLTSASG-ELSTDDALKGKIVGLYFSAHWCPPCRGFTPALVETYKKIKTAGKAFEIVFVSSDKDQGAFDEYFGEMPWLAVPFSDR 92
BLAST of mRNA_H-elongata_contig68504.14486.1 vs. uniprot
Match: A0A7S0SKT6_9CHLO (Hypothetical protein (Fragment) n=2 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0SKT6_9CHLO) HSP 1 Score: 105 bits (261), Expect = 9.940e-26 Identity = 46/101 (45.54%), Postives = 64/101 (63.37%), Query Frame = 1
Query: 7 LLGDMLRDSGGTDVPTSSSLEGKVVGLYFSASWCGPCRGFTPQLIKTYDAVRSAGKEFEVVLIGSDKKRDDFVRYHQKMPWLAVPFEDRLGQRSRWNCFFV 309
+ GD LR G +V T +L GKVVG+YFSA WC PCR FTP+L + Y+ +++ GK FE+V SDK ++F YH + PWLA+P+ +R + F V
Sbjct: 15 MFGDTLRGKDGVEVNTIDALAGKVVGVYFSAHWCPPCRKFTPKLAQIYEDLKAQGKNFEIVFASSDKTVEEFTEYHGEQPWLAIPYTNRESKNKLSKKFEV 115
BLAST of mRNA_H-elongata_contig68504.14486.1 vs. uniprot
Match: C1KG41_LEIDO (Mitochondrial tryparedoxin n=2 Tax=Leishmania TaxID=38568 RepID=C1KG41_LEIDO) HSP 1 Score: 101 bits (251), Expect = 3.090e-25 Identity = 51/90 (56.67%), Postives = 60/90 (66.67%), Query Frame = 1
Query: 40 TDVPTSSSLEGKVVGLYFSASWCGPCRGFTPQLIKTYDAVRSAGKEFEVVLIGSDKKRDDFVRYHQKMPWLAVPFEDRLGQRSRWNCFFV 309
TDV SS L GK + YFSASWC PCRGFTPQL++ Y + K FEV+LI D++ DDF Y+ KMPWLA+PFEDR G N F V
Sbjct: 20 TDVALSS-LAGKTLFFYFSASWCPPCRGFTPQLVEFYKT-HAKSKNFEVMLISWDEEVDDFTEYYGKMPWLALPFEDRKGMEFLKNGFKV 107
BLAST of mRNA_H-elongata_contig68504.14486.1 vs. uniprot
Match: A0A640KLN9_LEITA (Tryparedoxin, putative n=1 Tax=Leishmania tarentolae TaxID=5689 RepID=A0A640KLN9_LEITA) HSP 1 Score: 100 bits (250), Expect = 4.040e-25 Identity = 51/100 (51.00%), Postives = 64/100 (64.00%), Query Frame = 1
Query: 10 LGDMLRDSGGTDVPTSSSLEGKVVGLYFSASWCGPCRGFTPQLIKTYDAVRSAGKEFEVVLIGSDKKRDDFVRYHQKMPWLAVPFEDRLGQRSRWNCFFV 309
LGD+ + D SSL GK+V LYFSASWC PCRGFTP L++ Y +++ K FEVVL+ D++ DDF Y+QKMPWL +PFE R S F V
Sbjct: 8 LGDVSKLQKQNDTVDLSSLSGKIVFLYFSASWCPPCRGFTPLLMEFYQKYQTS-KNFEVVLVSWDEEEDDFNGYYQKMPWLTIPFEKRSILESLTKTFKV 106
BLAST of mRNA_H-elongata_contig68504.14486.1 vs. uniprot
Match: A0A067C8F6_SAPPC (Thioredoxin domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067C8F6_SAPPC) HSP 1 Score: 100 bits (250), Expect = 6.530e-25 Identity = 50/102 (49.02%), Postives = 63/102 (61.76%), Query Frame = 1
Query: 7 LLGDMLRDSGGTDVPTSSSLEG-KVVGLYFSASWCGPCRGFTPQLIKTYDAVRSAGKEFEVVLIGSDKKRDDFVRYHQKMPWLAVPFEDRLGQRSRWNCFFV 309
L+G LR SGG +V T+ L VVGLYFSA WCGPCR FTP L YD + A +F+VV + SDK DDF YH +MP+ A+P+ DR Q + F +
Sbjct: 11 LVGPRLRLSGGKEVATADHLASTSVVGLYFSAHWCGPCREFTPTLSTLYDDILDAHPDFDVVFVSSDKSEDDFCLYHDEMPFPALPWADRTRQAALREHFHI 112
BLAST of mRNA_H-elongata_contig68504.14486.1 vs. uniprot
Match: A0A7S0MU66_9CHLO (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0MU66_9CHLO) HSP 1 Score: 105 bits (262), Expect = 9.940e-25 Identity = 48/90 (53.33%), Postives = 61/90 (67.78%), Query Frame = 1
Query: 7 LLGDMLRDSGGTDVPTSSSLE-GKVVGLYFSASWCGPCRGFTPQLIKTYDAVRSAGKEFEVVLIGSDKKRDDFVRYHQKMPWLAVPFEDR 273
+LG L SGG V S E G + LYFSA WCGPCRGFTP+L+KTY+A+++AGK FE+V + SD+ F Y MPWLA+PF+ R
Sbjct: 144 VLGSELVSSGGNKVSVMSLKEAGTYIALYFSAHWCGPCRGFTPELVKTYNALKAAGKPFEIVFVSSDRDEASFAEYFGTMPWLALPFDKR 233
BLAST of mRNA_H-elongata_contig68504.14486.1 vs. uniprot
Match: A0A6I9S557_ELAGV (probable nucleoredoxin 1-1 n=3 Tax=Cocoseae TaxID=169705 RepID=A0A6I9S557_ELAGV) HSP 1 Score: 106 bits (264), Expect = 1.410e-24 Identity = 49/85 (57.65%), Postives = 59/85 (69.41%), Query Frame = 1
Query: 16 DMLRDSGGTDVPTSSSLEGKVVGLYFSASWCGPCRGFTPQLIKTYDAVRSAGKEFEVVLIGSDKKRDDFVRYHQKMPWLAVPFED 270
D L + G V ++ LEGK VGLYFSASWC PCRGFTP+LI+TY + S GK+FEVV + D+ D F Y KMPWLA+PF D
Sbjct: 59 DFLIHNNGDQVKIAN-LEGKTVGLYFSASWCPPCRGFTPKLIETYGELSSEGKDFEVVFVSGDRDEDSFNGYFSKMPWLAIPFSD 142
BLAST of mRNA_H-elongata_contig68504.14486.1 vs. uniprot
Match: A0A8K0N1S5_COCNU (Putative nucleoredoxin 1-1 n=1 Tax=Cocos nucifera TaxID=13894 RepID=A0A8K0N1S5_COCNU) HSP 1 Score: 105 bits (263), Expect = 1.510e-24 Identity = 50/97 (51.55%), Postives = 63/97 (64.95%), Query Frame = 1
Query: 19 MLRDSGGTDVPTSSSLEGKVVGLYFSASWCGPCRGFTPQLIKTYDAVRSAGKEFEVVLIGSDKKRDDFVRYHQKMPWLAVPFEDRLGQRSRWNCFFV 309
++R+SG D ++LEGK +GLYFSASWC PCR FTPQLI+TY + S GK+FEVV + D+ D F Y KMPWLA+PF D + F V
Sbjct: 32 LVRNSG--DQVKIANLEGKYIGLYFSASWCPPCRRFTPQLIETYGELSSVGKDFEVVFVSRDRDEDSFNGYFSKMPWLAIPFSDSKARDRLHKLFNV 126
BLAST of mRNA_H-elongata_contig68504.14486.1 vs. uniprot
Match: E9ADX3_LEIMA (Tryparedoxin n=8 Tax=Leishmania TaxID=38568 RepID=E9ADX3_LEIMA) HSP 1 Score: 99.0 bits (245), Expect = 2.500e-24 Identity = 46/83 (55.42%), Postives = 56/83 (67.47%), Query Frame = 1
Query: 61 SLEGKVVGLYFSASWCGPCRGFTPQLIKTYDAVRSAGKEFEVVLIGSDKKRDDFVRYHQKMPWLAVPFEDRLGQRSRWNCFFV 309
+L GK YFSASWC PCRGFTPQL++ Y + K FEV+LI D++ DDF Y++KMPWLA+PFEDR G N F V
Sbjct: 26 TLAGKTFFFYFSASWCPPCRGFTPQLVEFYKK-HAKSKNFEVMLISWDEEADDFAEYYKKMPWLALPFEDRKGMEFLKNGFKV 107 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig68504.14486.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig68504.14486.1 >prot_H-elongata_contig68504.14486.1 ID=prot_H-elongata_contig68504.14486.1|Name=mRNA_H-elongata_contig68504.14486.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=103bp MSLLGDMLRDSGGTDVPTSSSLEGKVVGLYFSASWCGPCRGFTPQLIKTYback to top mRNA from alignment at H-elongata_contig68504:1973..2569- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig68504.14486.1 ID=mRNA_H-elongata_contig68504.14486.1|Name=mRNA_H-elongata_contig68504.14486.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=597bp|location=Sequence derived from alignment at H-elongata_contig68504:1973..2569- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig68504:1973..2569- >mRNA_H-elongata_contig68504.14486.1 ID=mRNA_H-elongata_contig68504.14486.1|Name=mRNA_H-elongata_contig68504.14486.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=618bp|location=Sequence derived from alignment at H-elongata_contig68504:1973..2569- (Himanthalia elongata Himel1 dioecious)back to top |