mRNA_H-elongata_contig6839.14466.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig6839.14466.1 vs. uniprot
Match: A0A6H5KL96_9PHAE (Thioredoxin domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL96_9PHAE) HSP 1 Score: 255 bits (651), Expect = 1.750e-84 Identity = 128/158 (81.01%), Postives = 141/158 (89.24%), Query Frame = 1
Query: 1 SLQGAISSTLRMVSVGQAPPDFKLQNQSGKTVSLSSFKNKKQVVVFFYPKDSTPGCTKEAQTFQADLDQFKKLGAEVIGISSDADHTAFVKENGLSMTLLSDIGGEVRKDWKVKKAAFGTIDGRVTYVIDKSGVVTKIYDNLLDGGAHSKEALKALQA 474
S Q S+ LRMVSVGQA PDFKL NQ+GK V+LSSFKNKK+VVVFFYPKDSTPGCTKEAQTFQ+DL +FKK GAEVIGISSDADHT FVKEN LSMTLLSDIGG+VRK WKVK A FGTIDGRVTYV+DK+G+VT +YDNLLDG AHSKEALKAL++
Sbjct: 35 SAQRVSSTALRMVSVGQAAPDFKLNNQNGKPVTLSSFKNKKKVVVFFYPKDSTPGCTKEAQTFQSDLAKFKKAGAEVIGISSDADHTEFVKENNLSMTLLSDIGGKVRKAWKVKGAVFGTIDGRVTYVLDKNGIVTSMYDNLLDGAAHSKEALKALES 192
BLAST of mRNA_H-elongata_contig6839.14466.1 vs. uniprot
Match: D8LJF6_ECTSI (Thioredoxin domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJF6_ECTSI) HSP 1 Score: 250 bits (638), Expect = 3.670e-83 Identity = 125/147 (85.03%), Postives = 135/147 (91.84%), Query Frame = 1
Query: 34 MVSVGQAPPDFKLQNQSGKTVSLSSFKNKKQVVVFFYPKDSTPGCTKEAQTFQADLDQFKKLGAEVIGISSDADHTAFVKENGLSMTLLSDIGGEVRKDWKVKKAAFGTIDGRVTYVIDKSGVVTKIYDNLLDGGAHSKEALKALQA 474
MVSVGQA PDFKL NQ+GK V+LSSFKNKK+VVVFFYPKDSTPGCTKEAQTFQ+DL +FKK GAEVIGISSDADHT FVKEN LSMTLLSDIGG+VRK WKVK A FGTIDGRVTYV+DK+GVVT +YDNLLDG AHSKEALKAL+A
Sbjct: 1 MVSVGQAAPDFKLNNQNGKPVALSSFKNKKKVVVFFYPKDSTPGCTKEAQTFQSDLAKFKKAGAEVIGISSDADHTEFVKENNLSMTLLSDIGGKVRKAWKVKGAVFGTIDGRVTYVLDKNGVVTSMYDNLLDGAAHSKEALKALEA 147
BLAST of mRNA_H-elongata_contig6839.14466.1 vs. uniprot
Match: A0A0G4FWI1_VITBC (Thioredoxin domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4FWI1_VITBC) HSP 1 Score: 200 bits (509), Expect = 7.740e-63 Identity = 99/147 (67.35%), Postives = 112/147 (76.19%), Query Frame = 1
Query: 28 LRMVSVGQAPPDFKLQNQSGKTVSLSSFKNKKQVVVFFYPKDSTPGCTKEAQTFQADLDQFKKLGAEVIGISSDADHTAFVKENGLSMTLLSDIGGEVRKDWKVKKAAFGTIDGRVTYVIDKSGVVTKIYDNLLDGGAHSKEALKAL 468
L MV VG+ PDF L++QSGK V LSSFKNKK VVVFFYP D TPGCTK+AQ F LD FKKLGAEVIG+SSDADH+ F+ GL MTLLSDIGGEVRK W+V A FG + GRVTYVI K G+V K+YDNLLD +H +A AL
Sbjct: 48 LSMVKVGEMAPDFSLKDQSGKVVKLSSFKNKKSVVVFFYPADMTPGCTKQAQAFNTALDDFKKLGAEVIGVSSDADHSEFISAYGLKMTLLSDIGGEVRKQWQVPGAMFGALPGRVTYVIGKDGIVKKVYDNLLDSESHIPQARAAL 194
BLAST of mRNA_H-elongata_contig6839.14466.1 vs. uniprot
Match: A0A7S2V5C5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5C5_9STRA) HSP 1 Score: 194 bits (494), Expect = 1.470e-60 Identity = 99/151 (65.56%), Postives = 119/151 (78.81%), Query Frame = 1
Query: 19 SSTLRMVSVGQAPPDFKLQNQSGKTVSLSSFKNKKQVVVFFYPKDSTPGCTKEAQTFQADLDQFKKLGAEVIGISSDADHTAFVKENGLSMTLLSDIGGEVRKDWKVKKAAFGTIDGRVTYVIDKSGVVTKIYDNLLDGGAHS---KEALK 462
SSTL MVS GQA P F L++QSG T++L+S+K KK VV+FFYPKD TPGCTKEAQ F A+LD+F+K+GAEVIGISSDADH+AFV++ GL M LLSDI G VRK +KV + FG +DGRVTYVI K G+V KIYDN + +H KEALK
Sbjct: 44 SSTLSMVSEGQAAPSFSLKDQSGSTITLASYKGKKDVVLFFYPKDDTPGCTKEAQAFNANLDEFQKMGAEVIGISSDADHSAFVEKYGLKMKLLSDINGAVRKQFKVPSSLFGALDGRVTYVIGKDGIVKKIYDNQFNPESHIDVVKEALK 194
BLAST of mRNA_H-elongata_contig6839.14466.1 vs. uniprot
Match: A0A0G4GTF6_9ALVE (Thioredoxin domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4GTF6_9ALVE) HSP 1 Score: 174 bits (441), Expect = 1.160e-52 Identity = 83/149 (55.70%), Postives = 107/149 (71.81%), Query Frame = 1
Query: 22 STLRMVSVGQAPPDFKLQNQSGKTVSLSSFKNKKQVVVFFYPKDSTPGCTKEAQTFQADLDQFKKLGAEVIGISSDADHTAFVKENGLSMTLLSDIGGEVRKDWKVKKAAFGTIDGRVTYVIDKSGVVTKIYDNLLDGGAHSKEALKAL 468
S L MV+VG PDFKL +Q+G++VSLSSFK KK VV+FFYPKD TPGCT E F D+F KL A+++G+SSD DHT FV + G +TLLSD+GG VR+ +KV KA G +DGRVTY+I K G V +Y+N+++ H +EA K L
Sbjct: 33 SHLSMVNVGDVAPDFKLTDQNGQSVSLSSFKGKKDVVLFFYPKDDTPGCTAECDLFDKAADEFSKLNAKILGVSSDEDHTEFVSKYGFQLTLLSDVGGNVRQTYKVPKAMMGFLDGRVTYIIGKDGKVKSVYENMMEPAKHVEEARKVL 181
BLAST of mRNA_H-elongata_contig6839.14466.1 vs. uniprot
Match: A0A835Z8Y3_9STRA (Thioredoxin-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8Y3_9STRA) HSP 1 Score: 169 bits (428), Expect = 8.220e-51 Identity = 85/150 (56.67%), Postives = 110/150 (73.33%), Query Frame = 1
Query: 19 SSTLRMVSVGQAPPDFKLQNQSGKTVSLSSFKNKKQVVVFFYPKDSTPGCTKEAQTFQADLDQFKKLGAEVIGISSDADHTAFVKENGLSMTLLSDIGGEVRKDWKVKKAAFGTIDGRVTYVIDKSGVVTKIYDNLLDGGAH---SKEAL 459
+++LRMV G + PDF L++ +GK+VSLSSFK KK VV+FF+PK TPGCTKEA F A+L F K G E+IGISSDA+ AF + L MTLL+D GG VRK + V ++ FG +DGRVTYVI K G+V K++DNL+D +H SK+AL
Sbjct: 24 AASLRMVKAGDSAPDFTLKDSAGKSVSLSSFKGKKNVVLFFFPKSDTPGCTKEACAFNAELPVFAKAGTEIIGISSDAEQAAFKAKYNLGMTLLADAGGAVRKLYNVPRSMFGALDGRVTYVIGKDGIVKKVHDNLIDAESHVSISKQAL 173
BLAST of mRNA_H-elongata_contig6839.14466.1 vs. uniprot
Match: W7TJV0_9STRA (Peroxiredoxin q n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TJV0_9STRA) HSP 1 Score: 168 bits (426), Expect = 1.930e-50 Identity = 85/153 (55.56%), Postives = 105/153 (68.63%), Query Frame = 1
Query: 10 GAISSTLRMVSVGQAPPDFKLQNQSGKTVSLSSFKNKKQVVVFFYPKDSTPGCTKEAQTFQADLDQFKKLGAEVIGISSDADHTAFVKENGLSMTLLSDIGGEVRKDWKVKKAAFGTIDGRVTYVIDKSGVVTKIYDNLLDGGAHSKEALKAL 468
G + M+ VG A PDF L++Q+ K V LS+FK KK+VV+FFYPKD TPGCTKEA+ F A L FKK GAEV GISSD DHTAFV + GL M LLSD+GG RK ++V + FG +DGRVTYVI K + IYDN +H +++L L
Sbjct: 27 GRSRGVMNMLKVGDAAPDFALKDQNNKVVKLSTFKGKKEVVLFFYPKDDTPGCTKEAKAFSAALGDFKKKGAEVFGISSDEDHTAFVDKYGLQMQLLSDVGGATRKAYQVPSSLFGALDGRVTYVIGKDQKIRLIYDNQFAPESHVEKSLGTL 179
BLAST of mRNA_H-elongata_contig6839.14466.1 vs. uniprot
Match: A0A835QDD0_VANPL (Thioredoxin-dependent peroxiredoxin n=1 Tax=Vanilla planifolia TaxID=51239 RepID=A0A835QDD0_VANPL) HSP 1 Score: 155 bits (392), Expect = 1.250e-45 Identity = 84/153 (54.90%), Postives = 103/153 (67.32%), Query Frame = 1
Query: 22 STLRMVSVGQAPPDFKLQNQSGKTVSLSSFKNKKQVVVFFYPKDSTPGCTKEAQTFQADLDQFKKLGAEVIGISSD--ADHTAFVKENGLSMTLLSDIGGEVRKDWKVKKAAFGTIDGRVTYVIDKSGVVTKIYDNLLDGGAHSKEALKALQA 474
STL+ VS G PP+F L++Q GKTVSLS FK K +VV+FYP D TPGCTKEA F+ ++FKK GAEV+GIS D + H AF K+ L TLLSD G +VRK+W V FGT+ GR TYVIDK GV+ +Y+N H E LK LQ+
Sbjct: 3 STLK-VSKGDVPPNFNLKDQDGKTVSLSKFKGK-PIVVYFYPADETPGCTKEACAFRDSYEKFKKAGAEVVGISGDDPSSHKAFAKKYRLPFTLLSDDGNKVRKEWGVPSDLFGTLPGRQTYVIDKKGVIQLVYNNQFQPEKHVDETLKLLQS 153
BLAST of mRNA_H-elongata_contig6839.14466.1 vs. uniprot
Match: M2X6X8_GALSU (Peroxiredoxin Q/BCP n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2X6X8_GALSU) HSP 1 Score: 157 bits (396), Expect = 1.400e-45 Identity = 81/152 (53.29%), Postives = 106/152 (69.74%), Query Frame = 1
Query: 19 SSTLRMVSVGQAPPDFKLQNQSGKTVSLSSFKNKKQVVVFFYPKDSTPGCTKEAQTFQADLDQFKKLGAEVIGISSDADHTAFVKENGLSMTLLSDIGGEVRKDWKVKKAAFGTIDGRVTYVIDKSGVVTKIYDNLLDGGAHSKEALKALQA 474
+S L MV G+A PDF L++Q G V LS FK KK V+++FYPKD TPGCTK+A F+ ++ F +LGAEVIG+SSD DH FV++ L LLSD G +VRK ++V + FG + GRVTYVID+ G+V KIY+N H +EA KAL+A
Sbjct: 51 TSFLNMVKEGEAAPDFSLKDQDGNNVRLSDFKGKKAVILYFYPKDDTPGCTKQALCFREAIEDFAQLGAEVIGVSSDQDHRKFVEKYKLPFKLLSDEGSKVRKLYEVP-STFGILPGRVTYVIDRQGIVKKIYNNQFRSELHVEEAKKALKA 201
BLAST of mRNA_H-elongata_contig6839.14466.1 vs. uniprot
Match: UPI001CFC0FD1 (peroxiredoxin Q, chloroplastic-like n=1 Tax=Mangifera indica TaxID=29780 RepID=UPI001CFC0FD1) HSP 1 Score: 155 bits (391), Expect = 1.040e-44 Identity = 84/154 (54.55%), Postives = 103/154 (66.88%), Query Frame = 1
Query: 19 SSTLRMVSVGQAPPDFKLQNQSGKTVSLSSFKNKKQVVVFFYPKDSTPGCTKEAQTFQADLDQFKKLGAEVIGISSD--ADHTAFVKENGLSMTLLSDIGGEVRKDWKVKKAAFGTIDGRVTYVIDKSGVVTKIYDNLLDGGAHSKEALKALQA 474
+S + V+ GQ PP+F L++Q GK VSLS FK K VVV+FYP D TPGCTK+A F+ ++FKK GAEVIGIS D + H AF K+ L TLLSD G +VRKDW V FGT+ GR TYV+DK+GVV IY+N H E LK LQ+
Sbjct: 60 TSIVAKVTKGQVPPEFTLKDQDGKNVSLSRFKGK-PVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDTSSHKAFAKKYRLPFTLLSDEGNKVRKDWGVPADLFGTLPGRQTYVLDKNGVVQLIYNNQFQPEKHIDETLKLLQS 212 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig6839.14466.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig6839.14466.1 >prot_H-elongata_contig6839.14466.1 ID=prot_H-elongata_contig6839.14466.1|Name=mRNA_H-elongata_contig6839.14466.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=159bp SLQGAISSTLRMVSVGQAPPDFKLQNQSGKTVSLSSFKNKKQVVVFFYPKback to top mRNA from alignment at H-elongata_contig6839:1292..3865- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig6839.14466.1 ID=mRNA_H-elongata_contig6839.14466.1|Name=mRNA_H-elongata_contig6839.14466.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2574bp|location=Sequence derived from alignment at H-elongata_contig6839:1292..3865- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig6839:1292..3865- >mRNA_H-elongata_contig6839.14466.1 ID=mRNA_H-elongata_contig6839.14466.1|Name=mRNA_H-elongata_contig6839.14466.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=954bp|location=Sequence derived from alignment at H-elongata_contig6839:1292..3865- (Himanthalia elongata Himel1 dioecious)back to top |