mRNA_H-elongata_contig68033.14428.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig68033.14428.1 vs. uniprot
Match: A0A6H5JDY7_9PHAE (Aminotran_5 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDY7_9PHAE) HSP 1 Score: 125 bits (314), Expect = 9.420e-32 Identity = 53/77 (68.83%), Postives = 72/77 (93.51%), Query Frame = 1
Query: 1 PEIVGAIRLGLVFQLKERLGSLETREEALTHLGLSTLRAHPRVVVIGDTGRRRLPIFSFLIRHGDRFLHHSFVCKLL 231
P+I+G+IRLGLVFQ+KE+LGS+E +EE LTH+GL+ LR++PR+ ++GDTGR+RLPIFSFL+RHG+R+LHH+FVC LL
Sbjct: 477 PDILGSIRLGLVFQMKEKLGSVEEKEERLTHMGLTALRSNPRICLLGDTGRKRLPIFSFLVRHGNRYLHHNFVCALL 553
BLAST of mRNA_H-elongata_contig68033.14428.1 vs. uniprot
Match: D7G374_ECTSI (Class-V aminotransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G374_ECTSI) HSP 1 Score: 118 bits (296), Expect = 2.530e-29 Identity = 53/80 (66.25%), Postives = 70/80 (87.50%), Query Frame = 1
Query: 1 PEIVGAIRLGLVFQLKERLGSLETREEALTHLGLSTLRAHPRVVVIGDTGRRRLPIFSFLIRHGDR---FLHHSFVCKLL 231
P+I+G+IRLGLVFQ+KE+LGS+E +EE LTH+GL+ LR++PR+ +GDTGR RLPIFSFL+RHG+R +LHH+FVC LL
Sbjct: 424 PDILGSIRLGLVFQMKEKLGSVEEKEERLTHMGLTALRSNPRIFFLGDTGRERLPIFSFLVRHGNRGARYLHHNFVCALL 503
BLAST of mRNA_H-elongata_contig68033.14428.1 vs. uniprot
Match: D7FR81_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR81_ECTSI) HSP 1 Score: 99.8 bits (247), Expect = 1.070e-22 Identity = 50/82 (60.98%), Postives = 64/82 (78.05%), Query Frame = 1
Query: 1 PEIVGAIRLGLVFQLKERLG--SLETREEALTHLGLSTLRAHPRVVVIGDTGRRRLPIFSFLIRHGD---RFLHHSFVCKLL 231
P+I+G+IRLGL Q+KE +G L+ REEAL LGLSTLRAH +VV+GD+G++RLPIFSFL+R RFLH++FVC LL
Sbjct: 388 PDILGSIRLGLAVQMKESMGRRGLQGREEALAELGLSTLRAHKGIVVLGDSGKKRLPIFSFLVRTASSSGRFLHYNFVCALL 469
BLAST of mRNA_H-elongata_contig68033.14428.1 vs. uniprot
Match: A0A6H5JLY0_9PHAE (Aminotran_5 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLY0_9PHAE) HSP 1 Score: 92.4 bits (228), Expect = 3.930e-20 Identity = 47/83 (56.63%), Postives = 61/83 (73.49%), Query Frame = 1
Query: 1 PEIVGAIRLGLVFQLKERLGSLETREE---ALTHLGLSTLRAHPRVVVIGDTGRRRLPIFSFLIRHGD---RFLHHSFVCKLL 231
P+I+G+IRLGL Q+KE +G E + AL LGLSTLRAH +VV+GD+G++RLPIFSFL+R RFLH++FVC LL
Sbjct: 399 PDILGSIRLGLAVQMKESMGRRELQARIYRALAELGLSTLRAHKGIVVLGDSGKKRLPIFSFLVRTASSSGRFLHYNFVCALL 481
BLAST of mRNA_H-elongata_contig68033.14428.1 vs. uniprot
Match: A0A6G0WTZ0_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WTZ0_9STRA) HSP 1 Score: 79.7 bits (195), Expect = 1.150e-15 Identity = 41/80 (51.25%), Postives = 57/80 (71.25%), Query Frame = 1
Query: 1 PEIVGAIRLGLVFQLKERLG--SLETREEALTHLGLSTLRAHPRVVVIG-DTGRRRLPIFSFLIRHGDRFLHHSFVCKLL 231
P+ +G+IRLGL F+LK+R+G ++ REE L L+ H RVV++G + + RLPIFSFL+R G RFLH++FVC LL
Sbjct: 361 PDTLGSIRLGLAFELKQRIGVSTIMEREERHVRRVLDALQNHDRVVLLGHEFSQARLPIFSFLVRAGRRFLHYNFVCALL 440
BLAST of mRNA_H-elongata_contig68033.14428.1 vs. uniprot
Match: A0A1V9YME9_9STRA (Class V aminotransferase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YME9_9STRA) HSP 1 Score: 79.3 bits (194), Expect = 1.550e-15 Identity = 42/79 (53.16%), Postives = 51/79 (64.56%), Query Frame = 1
Query: 1 PEIVGAIRLGLVFQLKERLGS--LETREEALTHLGLSTLRAHPRVVVIGDTGRRRLPIFSFLIRHGDRFLHHSFVCKLL 231
P+IVGA+R +VFQLK LG L +E A+ + L+AHP VVV+GD RLP FSFLIRH FLH FV +LL
Sbjct: 356 PDIVGALRAAMVFQLKASLGHAFLRAQEAAVATRMYTALQAHPNVVVLGDPAAPRLPTFSFLIRHDTLFLHPQFVSRLL 434
BLAST of mRNA_H-elongata_contig68033.14428.1 vs. uniprot
Match: A0A1V9ZU97_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZU97_9STRA) HSP 1 Score: 79.3 bits (194), Expect = 1.570e-15 Identity = 43/81 (53.09%), Postives = 55/81 (67.90%), Query Frame = 1
Query: 1 PEIVGAIRLGLVFQLKERLGS--LETREEALTHLGLSTLRAHPRVVVIGD--TGRRRLPIFSFLIRHGDRFLHHSFVCKLL 231
P+ +GAIRLGL ++K R+G + REEA L+ L AHP VV++G RLPIFSFL+R GDRFLH++FVC LL
Sbjct: 330 PDNLGAIRLGLALEVKHRIGVSYILEREEAHVAQVLAALSAHPSVVLLGHDVAAPTRLPIFSFLVRAGDRFLHYNFVCALL 410
BLAST of mRNA_H-elongata_contig68033.14428.1 vs. uniprot
Match: K3WC28_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WC28_GLOUD) HSP 1 Score: 79.3 bits (194), Expect = 1.570e-15 Identity = 40/79 (50.63%), Postives = 56/79 (70.89%), Query Frame = 1
Query: 1 PEIVGAIRLGLVFQLKERLGSLETREEALTHLGL--STLRAHPRVVVIGDTGRRRLPIFSFLIRHGDRFLHHSFVCKLL 231
P+I+G+IRLGL F+LK+R+G+ E H+ TL ++ VV++G + +LPIFSFLIR GDRFLH++FVC LL
Sbjct: 375 PDILGSIRLGLAFELKQRVGAARIMEIEKQHVTRVRGTLGSNENVVLLGRSDVDQLPIFSFLIRFGDRFLHYNFVCALL 453
BLAST of mRNA_H-elongata_contig68033.14428.1 vs. uniprot
Match: UPI0009E1BDC2 (uncharacterized protein LOC110066069 n=1 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E1BDC2) HSP 1 Score: 79.3 bits (194), Expect = 1.570e-15 Identity = 43/81 (53.09%), Postives = 54/81 (66.67%), Query Frame = 1
Query: 1 PEIVGAIRLGLVFQLKERLGS--LETREEALTHLGLSTLRAHPRVVVIGDTGRRRLPIFSFLIRH--GDRFLHHSFVCKLL 231
P IVGAIR GLVFQLK+ +G+ + TREE L L+ + +V++G T RLPIFSFLIRH FLHH++VC LL
Sbjct: 349 PAIVGAIRAGLVFQLKQEIGAAAIMTREEELCRKALAAWSSSSNLVLLGSTSVPRLPIFSFLIRHPIAGVFLHHNYVCALL 429
BLAST of mRNA_H-elongata_contig68033.14428.1 vs. uniprot
Match: A0A7M7NSX4_STRPU (Uncharacterized protein n=1 Tax=Strongylocentrotus purpuratus TaxID=7668 RepID=A0A7M7NSX4_STRPU) HSP 1 Score: 78.6 bits (192), Expect = 2.940e-15 Identity = 41/81 (50.62%), Postives = 54/81 (66.67%), Query Frame = 1
Query: 1 PEIVGAIRLGLVFQLKERLGS--LETREEALTHLGLSTLRAHPRVVVIGDTGRRRLPIFSFLIRHGD--RFLHHSFVCKLL 231
P +VGAIR GLV QLKE +G + RE+ + + L + P +V++G T R RLPIFSFLIRH +FLHH+F+C LL
Sbjct: 327 PSVVGAIRAGLVMQLKETIGHDVIMKREKEICSSVMQRLSSCPNLVMLGSTSRPRLPIFSFLIRHPHTRQFLHHNFICALL 407 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig68033.14428.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig68033.14428.1 >prot_H-elongata_contig68033.14428.1 ID=prot_H-elongata_contig68033.14428.1|Name=mRNA_H-elongata_contig68033.14428.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=77bp PEIVGAIRLGLVFQLKERLGSLETREEALTHLGLSTLRAHPRVVVIGDTGback to top mRNA from alignment at H-elongata_contig68033:1473..2785- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig68033.14428.1 ID=mRNA_H-elongata_contig68033.14428.1|Name=mRNA_H-elongata_contig68033.14428.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1313bp|location=Sequence derived from alignment at H-elongata_contig68033:1473..2785- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig68033:1473..2785- >mRNA_H-elongata_contig68033.14428.1 ID=mRNA_H-elongata_contig68033.14428.1|Name=mRNA_H-elongata_contig68033.14428.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=462bp|location=Sequence derived from alignment at H-elongata_contig68033:1473..2785- (Himanthalia elongata Himel1 dioecious)back to top |