mRNA_H-elongata_contig67284.14337.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig67284.14337.1
Unique NamemRNA_H-elongata_contig67284.14337.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig67284.14337.1 vs. uniprot
Match: A0A6H5JTW4_9PHAE (Aldo_ket_red domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTW4_9PHAE)

HSP 1 Score: 280 bits (715), Expect = 4.200e-89
Identity = 153/253 (60.47%), Postives = 178/253 (70.36%), Query Frame = 1
Query:    7 SVVDTSANYTGGGSEEMVGRVVERWLASPESYGAPRTKVISKFGYASVRLRLRPESKLPGLIVAAPGLGHSLHPDFYRSQLASSNERMGNIAADAYIVEHPDHHLAFKLGLIG-KNGFKGVDLDTGSIASDLRLEEARQSFYDDMTTLFEAMEENVNVNVNGNGYYGVSSAGLSLPQSDPMHVSWERLVSCAEGAASRAGRERHSLMVVQMPANLLETTGLAAAPAMQSSGLMVMACHPLRAATPEGNFHLVD 762
            +VVDTSANY GG SE +VG  V+RWLAS E      T V+SKFGYA+        SKLPG+   APGL HSLHPDFYR +L++S  R+G     AY+VEHP+HHLA KLGL G +N     D       S ++L+EAR SFY++MT LF+AME      +     YGVSS GLSLP  DPMHVSWE+LV CAE AASRAGR+RH+  +VQMPANLLE TGLA APAMQ +GL VMACHPLRAATPEG F LVD
Sbjct:   33 TVVDTSANYMGGNSELLVGEGVDRWLASGEGKDKSLT-VVSKFGYAAAG------SKLPGVAHVAPGLSHSLHPDFYRHELSASTGRLGATEIGAYLVEHPEHHLALKLGLAGGENASATADGGXXXXPSQVQLDEARGSFYEEMTALFQAMEGQAERGM----AYGVSSLGLSLPTWDPMHVSWEKLVECAEQAASRAGRDRHAFKIVQMPANLLEVTGLATAPAMQKAGLKVMACHPLRAATPEGKFELVD 274          
BLAST of mRNA_H-elongata_contig67284.14337.1 vs. uniprot
Match: D7G6R3_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6R3_ECTSI)

HSP 1 Score: 270 bits (690), Expect = 7.120e-83
Identity = 152/254 (59.84%), Postives = 175/254 (68.90%), Query Frame = 1
Query:    7 SVVDTSANYTGGGSEEMVGRVVERWLASPESYGAPRTKVISKFGYASVRLRLRPESKLPGLIVAAPGLGHSLHPDFYRSQLASSNERMGNIAADAYIVEHPDHHLAFKLGLIG-KNGFKGVDLDTGSIASDLRLEEARQSFYDDMTTLFEAMEENVNVNVNGNGY-YGVSSAGLSLPQSDPMHVSWERLVSCAEGAASRAGRERHSLMVVQMPANLLETTGLAAAPAMQSSGLMVMACHPLRAATPEGNFHLVD 762
            +VVDTSANY GG SE +VG  V+RWLAS E      T V+SKFGYA+        SKLPG+    PGL HSLHPDFYR +L++S  R G     AY+VEHP+HHLA KLGL G +N     D    S  S  +L+ AR SFY++M  LF+AME        G G  YGVSS GLSLP  DPMHVSWE+LV CAE AASRAGR+RH+  +VQMPA+LLE TGLA APAMQ +GL VMACHPLRAATPEG F LVD
Sbjct:   33 TVVDTSANYMGGNSELLVGEGVDRWLASGEGKDTSIT-VVSKFGYAAAG------SKLPGVAHVVPGLSHSLHPDFYRHELSASTGRFGATEIGAYLVEHPEHHLALKLGLAGGENASATGDGGGPSPPSQAQLDLARGSFYEEMAALFQAMEGQA-----GRGMAYGVSSLGLSLPTWDPMHVSWEKLVECAEQAASRAGRDRHAFKIVQMPASLLEVTGLATAPAMQKAGLKVMACHPLRAATPEGKFELVD 274          
BLAST of mRNA_H-elongata_contig67284.14337.1 vs. uniprot
Match: A0A661J3D2_9DELT (Aldo_ket_red domain-containing protein n=3 Tax=Proteobacteria TaxID=1224 RepID=A0A661J3D2_9DELT)

HSP 1 Score: 104 bits (260), Expect = 5.190e-22
Identity = 77/229 (33.62%), Postives = 112/229 (48.91%), Query Frame = 1
Query:    7 SVVDTSANYTGGGSEEMVGRVVERWLASPESYGAPRTKVISKFGYAS------VRLRLRPESKLPGLIVAAPGLGHSLHPDFYRSQLASSNERMGNIAADAYIVEHPDHHLAF--KLGLIGKNGFKGVDLDTGSIASDLRLEEARQSFYDDMTTLFEAMEENVNVNVNGN-GYYGVSSAGLSLPQSDPMHVSWERLVSCAEGAASRAGRERHSLMVVQMPANLLETTGL 666
            +++DTS+NY  GGSE +VG V+E  LAS          V+SK GY         + R R  S    L++ A GL H +HP+F   QL  S ER+     D Y++ +P+++L++  K GLI                    LEEAR+ +Y  +   FE +E  V     G   +YG+SS     P +DP   S ER+   AE  +S+     H   ++Q+P NL ET G+
Sbjct:   94 NLIDTSSNYADGGSEALVGAVLED-LASSGDISRESVVVVSKVGYLQGQNYELSQERKRQGSSFRELVLYADGLEHCIHPEFLEDQLTRSLERLRLSCLDFYLLHNPEYYLSWASKTGLI--------------------LEEARREYYSRIKRAFEHLEHEVE---RGRISFYGISSNTFPSPATDPEFTSLERVWEIAESLSSK-----HHFRLIQLPMNLFETGGV 293          
BLAST of mRNA_H-elongata_contig67284.14337.1 vs. uniprot
Match: UPI001B8CB2CB (aldo/keto reductase n=1 Tax=Chloracidobacterium validum TaxID=2821543 RepID=UPI001B8CB2CB)

HSP 1 Score: 101 bits (252), Expect = 4.890e-21
Identity = 79/261 (30.27%), Postives = 111/261 (42.53%), Query Frame = 1
Query:    7 SVVDTSANYTGGGSEEMVGRVVERWLASPESYGAPRTKVISKFGYASV-RLRLRPESKLPGLIVAAPGLGHSLHPDFYRSQLASSNERMGNIAADAYIVEHPDHHLAFKLGLIGKNGFKGVDLDTGSIASDLRLEEARQSFYDDMTTLFEAMEENVNVNVNGNGYYGVSSAGLSLPQSDPMHVSWERLVSCAEGAASRAGRERHSLMVVQMPANLLET--------TGLAAAPAMQSSGLMVMACHPLRAATPEGNFHLVD 762
            +++DTSANYT GGSE  VGRV+                +++K GY     +RL      P ++   PGL H +HPDF  +Q+  S ER+G    D +++ +P++ L  +     K+G    D D                FY  +   F  +E  V        +YG+SS    LPQ DP H S  R ++ AE          H   VVQ P NL ET         GL       + G+  +A  PL A T +    L D
Sbjct:   59 NLIDTSANYTDGGSERTVGRVLR-------DIDRASVIIVTKGGYIQGDNMRLAQRRHFPEVVKYGPGLWHCIHPDFLATQIERSRERLGVATLDVFLLHNPEYFLNAR----AKHGVTDADHD---------------EFYRRIREAFVFLEAQVAAGTLR--FYGISSNNFPLPQRDPTHTSLARCLAQAESITPH-----HHFKVVQFPLNLFETGAVTEINNAGLTPLALCTAKGIGTLANRPLNAFTQQRMVRLAD 286          
BLAST of mRNA_H-elongata_contig67284.14337.1 vs. uniprot
Match: A0A7M1AZ12_9PROT (Aldo/keto reductase n=3 Tax=Sulfurimonas TaxID=202746 RepID=A0A7M1AZ12_9PROT)

HSP 1 Score: 99.8 bits (247), Expect = 1.510e-20
Identity = 74/239 (30.96%), Postives = 115/239 (48.12%), Query Frame = 1
Query:   10 VVDTSANYTGGGSEEMVGRVVERWLASPESYGAPRTKVISKFGYAS-VRLRLRPESKLPGLIVAAPGLGHSLHPDFYRSQLASSNERMGNIAADAYIVEHPDHHLAFKLGLIGKNGFKGVDLDTGSIASDLRLEEARQSFYDDMTTLFEAMEENVNVNVNGNGYYGVSSAGLSLPQSDPMHVSWERLVSCAEGAASRAGRERHSLMVVQMPANLLETTGLAAAPAMQSSGLMVMACHPL 723
            ++DTS NYT GG+E  +G+V    L S       + K++SK+GY     L    E     ++  +    HS+   F + QL +S ER+     D Y++ +P++ L   L   GKN              D  L+E  Q  Y+    L E ++E     +N    YG+SS   + P+ D   + +E L++ A+ AA  AG ++HS   VQ+P N +E  GL  A   + +GL V+A  PL
Sbjct:   32 LIDTSTNYTDGGAERAIGKV----LRSVPDAIRDKIKIVSKYGYIQGSNLLAHKEMPFEDVVEFSEHCYHSIAKSFLKKQLGASLERLQMRRIDCYLIHNPEYFLLDALNK-GKN-------------RDEVLDEMYQRIYEAFVGLEEEVKEG---RINS---YGISSNSFAKPEEDLEFLPYESLLTLAQNAADEAGNKQHSFTTVQLPINKVEREGLKCAAWAKKNGLRVLANRPL 246          
BLAST of mRNA_H-elongata_contig67284.14337.1 vs. uniprot
Match: E0UU34_SULAO (Aldo/keto reductase n=1 Tax=Sulfurimonas autotrophica (strain ATCC BAA-671 / DSM 16294 / JCM 11897 / OK10) TaxID=563040 RepID=E0UU34_SULAO)

HSP 1 Score: 99.4 bits (246), Expect = 2.000e-20
Identity = 71/242 (29.34%), Postives = 116/242 (47.93%), Query Frame = 1
Query:   10 VVDTSANYTGGGSEEMVGRVVERWLASPESYGAPRTKVISKFGYAS-VRLRLRPESKLPGLIVAAPGLGHSLHPDFYRSQLASSNERMGNIAADAYIVEHPDHHLAFKLGLIGKNGFKGVDLDTGSIASDLRLEEARQSFYDDMTTLFEAMEENVNVN-VNGNGYYGVSSAGLSLPQSDPMHVSWERLVSCAEGAASRAGRERHSLMVVQMPANLLETTGLAAAPAMQSSGLMVMACHPLRA 729
            ++DTS NYT GG+E  +G+V+  +   P++    + K++SK+GY     +    E     ++       HS+   F + QL +S ER+     D Y++ +P++ +   L        KG   D           E   S Y  +   F  +EE V    +N    YG+SS   +  ++DP  + +E L++ A+ AA  AG ++HS   VQ+P N++E  GL  A   +  GL V+A  PL A
Sbjct:   32 LIDTSTNYTDGGAERAIGKVLRNF---PDAI-RDKIKIVSKYGYIQGSNMLAHKEETFEDVVEFNQSCYHSIANSFMKKQLDASLERLQMSKIDCYLIHNPEYFILDALN-------KGKKRD-----------EILDSMYQRLYEAFIGLEEEVKEGRINS---YGISSNSFAKAKNDPKFLPYEDLLTLAQNAAQEAGNKKHSFSTVQLPVNIVEKEGLKCAAWAKKQGLRVLANRPLNA 248          
BLAST of mRNA_H-elongata_contig67284.14337.1 vs. uniprot
Match: A0A257B3R5_9BACT (Aldo_ket_red domain-containing protein n=1 Tax=Chloracidobacterium sp. CP2_5A TaxID=2012633 RepID=A0A257B3R5_9BACT)

HSP 1 Score: 99.8 bits (247), Expect = 2.330e-20
Identity = 82/261 (31.42%), Postives = 111/261 (42.53%), Query Frame = 1
Query:    7 SVVDTSANYTGGGSEEMVGRVVERWLASPESYGAPRTKVISKFGYASV-RLRLRPESKLPGLIVAAPGLGHSLHPDFYRSQLASSNERMGNIAADAYIVEHPDHHLAFKLGLIGKNGFKGVDLDTGSIASDLRLEEARQSFYDDMTTLFEAMEENVNVNVNGNGYYGVSSAGLSLPQSDPMHVSWERLVSCAEGAASRAGRERHSLMVVQMPANLLET--------TGLAAAPAMQSSGLMVMACHPLRAATPEGNFHLVD 762
            +++DTSANYT GG+E +VGRV+                V++K GY     LRL      P ++  A GL H +HP+F  +Q+  S ERMG    D +++ +P++ L        K G    D D                FY  +   F  +E    V      +YGVSS    LP SDP H S  R ++ AE  A       H   VVQ P NL ET         GL       + G+  +A  PL A T +    L D
Sbjct:   63 NLIDTSANYTDGGAERVVGRVLR-------DVDRASVIVVTKGGYIQGDNLRLAQRRNFPEVVRYATGLWHCIHPEFLATQIERSRERMGLTTLDVFLLHNPEYFL----NACEKRGVIAADHD---------------EFYRRVREAFAFLE--TQVAAGAIRFYGVSSNNFPLPASDPTHTSIARCLAQAESIAPD-----HHFKVVQFPLNLFETGAVTEVNNAGLTPLAFCAAQGIGTLANRPLNAFTRQHMIRLAD 290          
BLAST of mRNA_H-elongata_contig67284.14337.1 vs. uniprot
Match: A0A0G4EW99_VITBC (Aldo_ket_red domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EW99_VITBC)

HSP 1 Score: 99.4 bits (246), Expect = 2.750e-20
Identity = 80/261 (30.65%), Postives = 123/261 (47.13%), Query Frame = 1
Query:   10 VVDTSANYTGGGSEEMVGRVVERWLASPESYGAPRTKVISKFGYASVRLRLRPESKL--PGLIVAAPGLGHSLHPDFYRSQLASSNERMGNIAADAYIVEHPDHHLAFKLGLIGKNGFKGVDLDTGSIASDLRLEEARQSFYDDMTTLFEAMEENVNVNVNGNGYYGVSSAGLSLPQSDPMHVSWERLVSCAEGAASRAGRE-------RHSLMVVQMPANLLETTGLA-AAPAMQSSGLMVMACHPLRAATPEGNFHLVD 762
            ++D SANY  G +EE+VGRV++  L            ++SKFGY   +   R +  L  P  +   P L H +HP+F R QL  S +R+     D Y++ +P+++L  +            D  +G+  +D+    AR      +  +FEA+EE V        Y G+SS   S+ +SDP  + ++ L+  A  A+ RA           HS   +Q+P NL+ETTGL  A      + L V+   PL A T    + L D
Sbjct:   41 LIDNSANYGDGEAEELVGRVLKE-LEGEGKVTREDVLLVSKFGYIQGQNLKRHDGGLTFPETVDFGPHLKHCIHPEFMRDQLQRSLDRLQTTYLDVYLLHNPEYYLQSEK----------TDQQSGAKPADVV--RARNEMLRRVEQVFEALEEEVQSGGRLQSY-GISSNSFSVDESDPTFLPYQDLIERATRASIRAAERLKKAPPPSHSFSTIQLPGNLVETTGLDNAVKWAHHNHLRVLINRPLNAFTSTHAWRLAD 287          
BLAST of mRNA_H-elongata_contig67284.14337.1 vs. uniprot
Match: UPI00191B132F (aldo/keto reductase n=1 Tax=Tumebacillus sp. ITR2 TaxID=2801339 RepID=UPI00191B132F)

HSP 1 Score: 98.2 bits (243), Expect = 8.410e-20
Identity = 77/241 (31.95%), Postives = 121/241 (50.21%), Query Frame = 1
Query:    7 SVVDTSANYTGGGSEEMVGRVVERWLASPESYGAPRTKVISKFGYASVR-LRLRPESKLPG-----LIVAAPGLGHSLHPDFYRSQLASSNERMGNIAADAYIVEHPDHHLAFKLGLIGKNGFKGVDLDTGSIASDLRLEEARQSFYDDMTTLFEAMEENVNVNVNGN-GYYGVSSAGLSLPQSDPMHVSWERLVSCAEGAASRAGRERHSLMVVQMPANLLETTGLAAAPAMQSSGLMVM 708
            +V+DTS+NY+ GGSEE+VG+V+    ++ E     +  V+SK GY      RL  + K  G     L++   GL H +HP+F   QL +S ER+   A D Y++ +P+++L F      +NG              ++L+EAR+ +Y  +   F  +E  V     G   +YG+SS     P  + +  S ER+   AE  +     + H   V+Q+P NLLE  G+  A   QS+G  V+
Sbjct:   45 NVLDTSSNYSDGGSEELVGKVLAEMTSAGE-IDREQVVVVSKAGYLQGHNYRLSQQRKREGMPFLDLVLYGEGLEHCIHPEFLEDQLTASLERLQMQALDVYLLHNPEYYLGFAK----QNG--------------MQLDEAREEYYRRIELAFRHLEGEVE---RGRIRWYGISSNTFPAPAEEYLFTSLERVWEIAESIS-----DTHHFRVIQLPMNLLERGGVIQA--NQSNGQSVL 256          
BLAST of mRNA_H-elongata_contig67284.14337.1 vs. uniprot
Match: G2LIR1_CHLTF (Putative oxidoreductase, aryl-alcohol dehydrogenases like protein n=7 Tax=Chloracidobacterium TaxID=458032 RepID=G2LIR1_CHLTF)

HSP 1 Score: 96.7 bits (239), Expect = 2.870e-19
Identity = 78/261 (29.89%), Postives = 111/261 (42.53%), Query Frame = 1
Query:    7 SVVDTSANYTGGGSEEMVGRVVERWLASPESYGAPRTKVISKFGYASV-RLRLRPESKLPGLIVAAPGLGHSLHPDFYRSQLASSNERMGNIAADAYIVEHPDHHLAFKLGLIGKNGFKGVDLDTGSIASDLRLEEARQSFYDDMTTLFEAMEENVNVNVNGNGYYGVSSAGLSLPQSDPMHVSWERLVSCAEGAASRAGRERHSLMVVQMPANLLET--------TGLAAAPAMQSSGLMVMACHPLRAATPEGNFHLVD 762
            +++DTSANYT GG+E  +GRV+     S          +++K GY     +RL      P ++   PGL H +HP+F  +Q+  S ERMG +  D  ++ +P++ L        K G    D                ++FY  +   F  +E  V   V    +YG+SS    L   DP HVS  R ++ AE          H   VVQ P NLLET         GL       + GL  +A  PL A   +    L D
Sbjct:   60 NLIDTSANYTDGGAERTIGRVLRETDRSA-------VILVTKAGYIQGDNMRLAQSRNFPEVVRYGPGLWHCIHPEFLATQIERSRERMGVVTLDVLLLHNPEYFLM----ACAKRGITAAD---------------HEAFYRRIREAFAFLETQVAAGVIR--FYGISSNHFPLSADDPTHVSLARCLAQAESVTPN-----HHFRVVQFPLNLLETGAVTEINNDGLTPLEFCATHGLGTLANRPLNAFARQRLVRLAD 287          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig67284.14337.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JTW4_9PHAE4.200e-8960.47Aldo_ket_red domain-containing protein n=1 Tax=Ect... [more]
D7G6R3_ECTSI7.120e-8359.84EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
A0A661J3D2_9DELT5.190e-2233.62Aldo_ket_red domain-containing protein n=3 Tax=Pro... [more]
UPI001B8CB2CB4.890e-2130.27aldo/keto reductase n=1 Tax=Chloracidobacterium va... [more]
A0A7M1AZ12_9PROT1.510e-2030.96Aldo/keto reductase n=3 Tax=Sulfurimonas TaxID=202... [more]
E0UU34_SULAO2.000e-2029.34Aldo/keto reductase n=1 Tax=Sulfurimonas autotroph... [more]
A0A257B3R5_9BACT2.330e-2031.42Aldo_ket_red domain-containing protein n=1 Tax=Chl... [more]
A0A0G4EW99_VITBC2.750e-2030.65Aldo_ket_red domain-containing protein n=1 Tax=Vit... [more]
UPI00191B132F8.410e-2031.95aldo/keto reductase n=1 Tax=Tumebacillus sp. ITR2 ... [more]
G2LIR1_CHLTF2.870e-1929.89Putative oxidoreductase, aryl-alcohol dehydrogenas... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig67284contigH-elongata_contig67284:782..2448 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score273.5
Seed ortholog evalue1e-70
Seed eggNOG ortholog2880.D7G6R3
EggNOG OGs2E5ZQ@1,2SCRD@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons3
Model size762
Cds size762
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig67284.14337.1prot_H-elongata_contig67284.14337.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig67284 782..2448 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931063.7788606-CDS-H-elongata_contig67284:781..9321622931063.7788606-CDS-H-elongata_contig67284:781..932Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig67284 782..932 -
1691679683.0147464-CDS-H-elongata_contig67284:781..9321691679683.0147464-CDS-H-elongata_contig67284:781..932Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig67284 782..932 -
1622931063.8000588-CDS-H-elongata_contig67284:1315..17611622931063.8000588-CDS-H-elongata_contig67284:1315..1761Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig67284 1316..1761 -
1691679683.0260985-CDS-H-elongata_contig67284:1315..17611691679683.0260985-CDS-H-elongata_contig67284:1315..1761Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig67284 1316..1761 -
1622931063.8402221-CDS-H-elongata_contig67284:2283..24481622931063.8402221-CDS-H-elongata_contig67284:2283..2448Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig67284 2284..2448 -
1691679683.0359123-CDS-H-elongata_contig67284:2283..24481691679683.0359123-CDS-H-elongata_contig67284:2283..2448Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig67284 2284..2448 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig67284.14337.1

>prot_H-elongata_contig67284.14337.1 ID=prot_H-elongata_contig67284.14337.1|Name=mRNA_H-elongata_contig67284.14337.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=254bp
MNSVVDTSANYTGGGSEEMVGRVVERWLASPESYGAPRTKVISKFGYASV
RLRLRPESKLPGLIVAAPGLGHSLHPDFYRSQLASSNERMGNIAADAYIV
EHPDHHLAFKLGLIGKNGFKGVDLDTGSIASDLRLEEARQSFYDDMTTLF
EAMEENVNVNVNGNGYYGVSSAGLSLPQSDPMHVSWERLVSCAEGAASRA
GRERHSLMVVQMPANLLETTGLAAAPAMQSSGLMVMACHPLRAATPEGNF
HLVD
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mRNA from alignment at H-elongata_contig67284:782..2448-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig67284.14337.1 ID=mRNA_H-elongata_contig67284.14337.1|Name=mRNA_H-elongata_contig67284.14337.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1667bp|location=Sequence derived from alignment at H-elongata_contig67284:782..2448- (Himanthalia elongata Himel1 dioecious)
ATGAACTCAGTTGTGGACACCAGCGCAAACTACACAGGTGGCGGCAGCGA GGAAATGGTCGGTCGAGTGGTCGAGCGGTGGCTTGCCTCCCCAGAAAGCT ACGGTGCCCCTCGCACGAAGGTTATATCCAAGTTCGGGTACGCATCGGTG AGGTTGAGGTTGAGGGTGGTTCCGGTGTGCGCTGCTGTAGCCTGATCACA GTTTGTCTCCAGCACGATATTTGCCGTGATGGAAGCACGTTAAATCTCAG TAAGGCGAAAGGCGAGAGGCACTTCCAGACCTTGGGGCTCGCCTTAGGCC TCGGAGTATTCCAAGGCTCGATGGCTGATTTATCAAAACAACGGGCTTCT CTTATCTTATCGTGCTACTTCTGTACTATAATACTCATATTAATACTACT ATTACTACTAGTACTATTACTACTAATATTACTACTCTTACTATTAGTAG TATCATCGATCCCCTAGAATGACGAAGATGACAGGGCCGAATTGCGCGGT TATGTGATTCAATAAAAACTACTACTATCTCTACTATCACTATTACTATT ACTACTACTATTACTATTACTATTACTATTAATACTACTATTACTATTAC TACTACTATTACTAATACTATTACTATTACTATTACTACCAACAATAATG ATGCGTCGCCGGTTCAAAACATTATCACTACCATCAGCCAGAATCCAAGC TCCCGGGACTAATTGTCGCAGCGCCGGGTTTAGGCCACTCGCTTCACCCG GATTTCTACCGAAGTCAGTTGGCCTCTTCAAACGAGCGAATGGGGAACAT CGCGGCAGACGCGTATATCGTGGAGCATCCCGATCACCACCTAGCCTTCA AGCTGGGATTGATAGGCAAGAATGGCTTCAAGGGAGTAGATCTAGATACC GGCTCAATTGCCAGCGATCTACGCTTGGAAGAAGCCCGCCAATCTTTTTA TGACGACATGACGACATTATTCGAGGCGATGGAGGAAAACGTAAACGTCA ATGTCAATGGAAACGGTTATTACGGCGTGAGCAGTGCGGGGTTGTCGTTG CCTCAGTCGGATCCGATGCACGTGTCGTGGGAGAGGCTCGTGAGTTGTGC CGAAGGAGCGGCATCAAGAGCAGGTCGAGAGAGGTGACGAGGGTACAACA CTGCAACGGTACTTGCGTGTGGCGGTCGGGTCATTAGGGTTAACGAGAAG GATGGGACTTGTTTTGGGCTCTCCTTGGTCATTGATGGAACTTGGACTTG TTGTTAGACTTCGAAACGTTTTGACGGTGTTCCGAGAAAGAGCTCTGTGA TCCAATCGTGATCCAATCGAAGATTAGTATATGTTATGTTGCAGGGAAGC GTACGTGAATCGGTGAAATTGCCACTCATTTTTAATATTGTGCCCTCGAG AGGGTAGAGAGGGTAAACTTAATGCACGGCCCTGAAATTCTCCCGCTCTG TCAGCTCACTCAACCGCGCGTGACGTTCTCCCCTTGGTGCATATTTGAAT ATCTTCATCTCTTAAGGCATTCTTTGATGGTCGTGCAAATGCCTGCAAAC CTGCTGGAAACAACGGGGCTTGCAGCGGCCCCCGCGATGCAAAGCTCTGG TCTCATGGTAATGGCATGTCACCCGCTAAGGGCGGCGACGCCGGAGGGGA ATTTTCACCTTGTGGAT
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Coding sequence (CDS) from alignment at H-elongata_contig67284:782..2448-

>mRNA_H-elongata_contig67284.14337.1 ID=mRNA_H-elongata_contig67284.14337.1|Name=mRNA_H-elongata_contig67284.14337.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1524bp|location=Sequence derived from alignment at H-elongata_contig67284:782..2448- (Himanthalia elongata Himel1 dioecious)
ATGAACTCAGTTGTGGACACCAGCGCAAACTACACAGGTGGCGGCAGCGA
GGAAATGGTCGGTCGAGTGGTCGAGCGGTGGCTTGCCTCCCCAGAAAGCT
ACGGTGCCCCTCGCACGAAGGTTATATCCAAGTTCGGGTACGCATCGGTG
AGGTTGAGGTTGAGGATGAACTCAGTTGTGGACACCAGCGCAAACTACAC
AGGTGGCGGCAGCGAGGAAATGGTCGGTCGAGTGGTCGAGCGGTGGCTTG
CCTCCCCAGAAAGCTACGGTGCCCCTCGCACGAAGGTTATATCCAAGTTC
GGGTACGCATCGGTGAGGTTGAGGTTGAGGCCAGAATCCAAGCTCCCGGG
ACTAATTGTCGCAGCGCCGGGTTTAGGCCACTCGCTTCACCCGGATTTCT
ACCGAAGTCAGTTGGCCTCTTCAAACGAGCGAATGGGGAACATCGCGGCA
GACGCGTATATCGTGGAGCATCCCGATCACCACCTAGCCTTCAAGCTGGG
ATTGATAGGCAAGAATGGCTTCAAGGGAGTAGATCTAGATACCGGCTCAA
TTGCCAGCGATCTACGCTTGGAAGAAGCCCGCCAATCTTTTTATGACGAC
ATGACGACATTATTCGAGGCGATGGAGGAAAACGTAAACGTCAATGTCAA
TGGAAACGGTTATTACGGCGTGAGCAGTGCGGGGTTGTCGTTGCCTCAGT
CGGATCCGATGCACGTGTCGTGGGAGAGGCTCGTGAGTTGTGCCGAAGGA
GCGGCATCAAGAGCAGGTCGAGAGAGCCAGAATCCAAGCTCCCGGGACTA
ATTGTCGCAGCGCCGGGTTTAGGCCACTCGCTTCACCCGGATTTCTACCG
AAGTCAGTTGGCCTCTTCAAACGAGCGAATGGGGAACATCGCGGCAGACG
CGTATATCGTGGAGCATCCCGATCACCACCTAGCCTTCAAGCTGGGATTG
ATAGGCAAGAATGGCTTCAAGGGAGTAGATCTAGATACCGGCTCAATTGC
CAGCGATCTACGCTTGGAAGAAGCCCGCCAATCTTTTTATGACGACATGA
CGACATTATTCGAGGCGATGGAGGAAAACGTAAACGTCAATGTCAATGGA
AACGGTTATTACGGCGTGAGCAGTGCGGGGTTGTCGTTGCCTCAGTCGGA
TCCGATGCACGTGTCGTGGGAGAGGCTCGTGAGTTGTGCCGAAGGAGCGG
CATCAAGAGCAGGTCGAGAGAGGCATTCTTTGATGGTCGTGCAAATGCCT
GCAAACCTGCTGGAAACAACGGGGCTTGCAGCGGCCCCCGCGATGCAAAG
CTCTGGTCTCATGGTAATGGCATGTCACCCGCTAAGGGCGGCGACGCCGG
AGGGGAATTTTCACCTTGTGGATGCATTCTTTGATGGTCGTGCAAATGCC
TGCAAACCTGCTGGAAACAACGGGGCTTGCAGCGGCCCCCGCGATGCAAA
GCTCTGGTCTCATGGTAATGGCATGTCACCCGCTAAGGGCGGCGACGCCG
GAGGGGAATTTTCACCTTGTGGAT
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