mRNA_H-elongata_contig67284.14337.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig67284.14337.1 vs. uniprot
Match: A0A6H5JTW4_9PHAE (Aldo_ket_red domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTW4_9PHAE) HSP 1 Score: 280 bits (715), Expect = 4.200e-89 Identity = 153/253 (60.47%), Postives = 178/253 (70.36%), Query Frame = 1
Query: 7 SVVDTSANYTGGGSEEMVGRVVERWLASPESYGAPRTKVISKFGYASVRLRLRPESKLPGLIVAAPGLGHSLHPDFYRSQLASSNERMGNIAADAYIVEHPDHHLAFKLGLIG-KNGFKGVDLDTGSIASDLRLEEARQSFYDDMTTLFEAMEENVNVNVNGNGYYGVSSAGLSLPQSDPMHVSWERLVSCAEGAASRAGRERHSLMVVQMPANLLETTGLAAAPAMQSSGLMVMACHPLRAATPEGNFHLVD 762
+VVDTSANY GG SE +VG V+RWLAS E T V+SKFGYA+ SKLPG+ APGL HSLHPDFYR +L++S R+G AY+VEHP+HHLA KLGL G +N D S ++L+EAR SFY++MT LF+AME + YGVSS GLSLP DPMHVSWE+LV CAE AASRAGR+RH+ +VQMPANLLE TGLA APAMQ +GL VMACHPLRAATPEG F LVD
Sbjct: 33 TVVDTSANYMGGNSELLVGEGVDRWLASGEGKDKSLT-VVSKFGYAAAG------SKLPGVAHVAPGLSHSLHPDFYRHELSASTGRLGATEIGAYLVEHPEHHLALKLGLAGGENASATADGGXXXXPSQVQLDEARGSFYEEMTALFQAMEGQAERGM----AYGVSSLGLSLPTWDPMHVSWEKLVECAEQAASRAGRDRHAFKIVQMPANLLEVTGLATAPAMQKAGLKVMACHPLRAATPEGKFELVD 274
BLAST of mRNA_H-elongata_contig67284.14337.1 vs. uniprot
Match: D7G6R3_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6R3_ECTSI) HSP 1 Score: 270 bits (690), Expect = 7.120e-83 Identity = 152/254 (59.84%), Postives = 175/254 (68.90%), Query Frame = 1
Query: 7 SVVDTSANYTGGGSEEMVGRVVERWLASPESYGAPRTKVISKFGYASVRLRLRPESKLPGLIVAAPGLGHSLHPDFYRSQLASSNERMGNIAADAYIVEHPDHHLAFKLGLIG-KNGFKGVDLDTGSIASDLRLEEARQSFYDDMTTLFEAMEENVNVNVNGNGY-YGVSSAGLSLPQSDPMHVSWERLVSCAEGAASRAGRERHSLMVVQMPANLLETTGLAAAPAMQSSGLMVMACHPLRAATPEGNFHLVD 762
+VVDTSANY GG SE +VG V+RWLAS E T V+SKFGYA+ SKLPG+ PGL HSLHPDFYR +L++S R G AY+VEHP+HHLA KLGL G +N D S S +L+ AR SFY++M LF+AME G G YGVSS GLSLP DPMHVSWE+LV CAE AASRAGR+RH+ +VQMPA+LLE TGLA APAMQ +GL VMACHPLRAATPEG F LVD
Sbjct: 33 TVVDTSANYMGGNSELLVGEGVDRWLASGEGKDTSIT-VVSKFGYAAAG------SKLPGVAHVVPGLSHSLHPDFYRHELSASTGRFGATEIGAYLVEHPEHHLALKLGLAGGENASATGDGGGPSPPSQAQLDLARGSFYEEMAALFQAMEGQA-----GRGMAYGVSSLGLSLPTWDPMHVSWEKLVECAEQAASRAGRDRHAFKIVQMPASLLEVTGLATAPAMQKAGLKVMACHPLRAATPEGKFELVD 274
BLAST of mRNA_H-elongata_contig67284.14337.1 vs. uniprot
Match: A0A661J3D2_9DELT (Aldo_ket_red domain-containing protein n=3 Tax=Proteobacteria TaxID=1224 RepID=A0A661J3D2_9DELT) HSP 1 Score: 104 bits (260), Expect = 5.190e-22 Identity = 77/229 (33.62%), Postives = 112/229 (48.91%), Query Frame = 1
Query: 7 SVVDTSANYTGGGSEEMVGRVVERWLASPESYGAPRTKVISKFGYAS------VRLRLRPESKLPGLIVAAPGLGHSLHPDFYRSQLASSNERMGNIAADAYIVEHPDHHLAF--KLGLIGKNGFKGVDLDTGSIASDLRLEEARQSFYDDMTTLFEAMEENVNVNVNGN-GYYGVSSAGLSLPQSDPMHVSWERLVSCAEGAASRAGRERHSLMVVQMPANLLETTGL 666
+++DTS+NY GGSE +VG V+E LAS V+SK GY + R R S L++ A GL H +HP+F QL S ER+ D Y++ +P+++L++ K GLI LEEAR+ +Y + FE +E V G +YG+SS P +DP S ER+ AE +S+ H ++Q+P NL ET G+
Sbjct: 94 NLIDTSSNYADGGSEALVGAVLED-LASSGDISRESVVVVSKVGYLQGQNYELSQERKRQGSSFRELVLYADGLEHCIHPEFLEDQLTRSLERLRLSCLDFYLLHNPEYYLSWASKTGLI--------------------LEEARREYYSRIKRAFEHLEHEVE---RGRISFYGISSNTFPSPATDPEFTSLERVWEIAESLSSK-----HHFRLIQLPMNLFETGGV 293
BLAST of mRNA_H-elongata_contig67284.14337.1 vs. uniprot
Match: UPI001B8CB2CB (aldo/keto reductase n=1 Tax=Chloracidobacterium validum TaxID=2821543 RepID=UPI001B8CB2CB) HSP 1 Score: 101 bits (252), Expect = 4.890e-21 Identity = 79/261 (30.27%), Postives = 111/261 (42.53%), Query Frame = 1
Query: 7 SVVDTSANYTGGGSEEMVGRVVERWLASPESYGAPRTKVISKFGYASV-RLRLRPESKLPGLIVAAPGLGHSLHPDFYRSQLASSNERMGNIAADAYIVEHPDHHLAFKLGLIGKNGFKGVDLDTGSIASDLRLEEARQSFYDDMTTLFEAMEENVNVNVNGNGYYGVSSAGLSLPQSDPMHVSWERLVSCAEGAASRAGRERHSLMVVQMPANLLET--------TGLAAAPAMQSSGLMVMACHPLRAATPEGNFHLVD 762
+++DTSANYT GGSE VGRV+ +++K GY +RL P ++ PGL H +HPDF +Q+ S ER+G D +++ +P++ L + K+G D D FY + F +E V +YG+SS LPQ DP H S R ++ AE H VVQ P NL ET GL + G+ +A PL A T + L D
Sbjct: 59 NLIDTSANYTDGGSERTVGRVLR-------DIDRASVIIVTKGGYIQGDNMRLAQRRHFPEVVKYGPGLWHCIHPDFLATQIERSRERLGVATLDVFLLHNPEYFLNAR----AKHGVTDADHD---------------EFYRRIREAFVFLEAQVAAGTLR--FYGISSNNFPLPQRDPTHTSLARCLAQAESITPH-----HHFKVVQFPLNLFETGAVTEINNAGLTPLALCTAKGIGTLANRPLNAFTQQRMVRLAD 286
BLAST of mRNA_H-elongata_contig67284.14337.1 vs. uniprot
Match: A0A7M1AZ12_9PROT (Aldo/keto reductase n=3 Tax=Sulfurimonas TaxID=202746 RepID=A0A7M1AZ12_9PROT) HSP 1 Score: 99.8 bits (247), Expect = 1.510e-20 Identity = 74/239 (30.96%), Postives = 115/239 (48.12%), Query Frame = 1
Query: 10 VVDTSANYTGGGSEEMVGRVVERWLASPESYGAPRTKVISKFGYAS-VRLRLRPESKLPGLIVAAPGLGHSLHPDFYRSQLASSNERMGNIAADAYIVEHPDHHLAFKLGLIGKNGFKGVDLDTGSIASDLRLEEARQSFYDDMTTLFEAMEENVNVNVNGNGYYGVSSAGLSLPQSDPMHVSWERLVSCAEGAASRAGRERHSLMVVQMPANLLETTGLAAAPAMQSSGLMVMACHPL 723
++DTS NYT GG+E +G+V L S + K++SK+GY L E ++ + HS+ F + QL +S ER+ D Y++ +P++ L L GKN D L+E Q Y+ L E ++E +N YG+SS + P+ D + +E L++ A+ AA AG ++HS VQ+P N +E GL A + +GL V+A PL
Sbjct: 32 LIDTSTNYTDGGAERAIGKV----LRSVPDAIRDKIKIVSKYGYIQGSNLLAHKEMPFEDVVEFSEHCYHSIAKSFLKKQLGASLERLQMRRIDCYLIHNPEYFLLDALNK-GKN-------------RDEVLDEMYQRIYEAFVGLEEEVKEG---RINS---YGISSNSFAKPEEDLEFLPYESLLTLAQNAADEAGNKQHSFTTVQLPINKVEREGLKCAAWAKKNGLRVLANRPL 246
BLAST of mRNA_H-elongata_contig67284.14337.1 vs. uniprot
Match: E0UU34_SULAO (Aldo/keto reductase n=1 Tax=Sulfurimonas autotrophica (strain ATCC BAA-671 / DSM 16294 / JCM 11897 / OK10) TaxID=563040 RepID=E0UU34_SULAO) HSP 1 Score: 99.4 bits (246), Expect = 2.000e-20 Identity = 71/242 (29.34%), Postives = 116/242 (47.93%), Query Frame = 1
Query: 10 VVDTSANYTGGGSEEMVGRVVERWLASPESYGAPRTKVISKFGYAS-VRLRLRPESKLPGLIVAAPGLGHSLHPDFYRSQLASSNERMGNIAADAYIVEHPDHHLAFKLGLIGKNGFKGVDLDTGSIASDLRLEEARQSFYDDMTTLFEAMEENVNVN-VNGNGYYGVSSAGLSLPQSDPMHVSWERLVSCAEGAASRAGRERHSLMVVQMPANLLETTGLAAAPAMQSSGLMVMACHPLRA 729
++DTS NYT GG+E +G+V+ + P++ + K++SK+GY + E ++ HS+ F + QL +S ER+ D Y++ +P++ + L KG D E S Y + F +EE V +N YG+SS + ++DP + +E L++ A+ AA AG ++HS VQ+P N++E GL A + GL V+A PL A
Sbjct: 32 LIDTSTNYTDGGAERAIGKVLRNF---PDAI-RDKIKIVSKYGYIQGSNMLAHKEETFEDVVEFNQSCYHSIANSFMKKQLDASLERLQMSKIDCYLIHNPEYFILDALN-------KGKKRD-----------EILDSMYQRLYEAFIGLEEEVKEGRINS---YGISSNSFAKAKNDPKFLPYEDLLTLAQNAAQEAGNKKHSFSTVQLPVNIVEKEGLKCAAWAKKQGLRVLANRPLNA 248
BLAST of mRNA_H-elongata_contig67284.14337.1 vs. uniprot
Match: A0A257B3R5_9BACT (Aldo_ket_red domain-containing protein n=1 Tax=Chloracidobacterium sp. CP2_5A TaxID=2012633 RepID=A0A257B3R5_9BACT) HSP 1 Score: 99.8 bits (247), Expect = 2.330e-20 Identity = 82/261 (31.42%), Postives = 111/261 (42.53%), Query Frame = 1
Query: 7 SVVDTSANYTGGGSEEMVGRVVERWLASPESYGAPRTKVISKFGYASV-RLRLRPESKLPGLIVAAPGLGHSLHPDFYRSQLASSNERMGNIAADAYIVEHPDHHLAFKLGLIGKNGFKGVDLDTGSIASDLRLEEARQSFYDDMTTLFEAMEENVNVNVNGNGYYGVSSAGLSLPQSDPMHVSWERLVSCAEGAASRAGRERHSLMVVQMPANLLET--------TGLAAAPAMQSSGLMVMACHPLRAATPEGNFHLVD 762
+++DTSANYT GG+E +VGRV+ V++K GY LRL P ++ A GL H +HP+F +Q+ S ERMG D +++ +P++ L K G D D FY + F +E V +YGVSS LP SDP H S R ++ AE A H VVQ P NL ET GL + G+ +A PL A T + L D
Sbjct: 63 NLIDTSANYTDGGAERVVGRVLR-------DVDRASVIVVTKGGYIQGDNLRLAQRRNFPEVVRYATGLWHCIHPEFLATQIERSRERMGLTTLDVFLLHNPEYFL----NACEKRGVIAADHD---------------EFYRRVREAFAFLE--TQVAAGAIRFYGVSSNNFPLPASDPTHTSIARCLAQAESIAPD-----HHFKVVQFPLNLFETGAVTEVNNAGLTPLAFCAAQGIGTLANRPLNAFTRQHMIRLAD 290
BLAST of mRNA_H-elongata_contig67284.14337.1 vs. uniprot
Match: A0A0G4EW99_VITBC (Aldo_ket_red domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EW99_VITBC) HSP 1 Score: 99.4 bits (246), Expect = 2.750e-20 Identity = 80/261 (30.65%), Postives = 123/261 (47.13%), Query Frame = 1
Query: 10 VVDTSANYTGGGSEEMVGRVVERWLASPESYGAPRTKVISKFGYASVRLRLRPESKL--PGLIVAAPGLGHSLHPDFYRSQLASSNERMGNIAADAYIVEHPDHHLAFKLGLIGKNGFKGVDLDTGSIASDLRLEEARQSFYDDMTTLFEAMEENVNVNVNGNGYYGVSSAGLSLPQSDPMHVSWERLVSCAEGAASRAGRE-------RHSLMVVQMPANLLETTGLA-AAPAMQSSGLMVMACHPLRAATPEGNFHLVD 762
++D SANY G +EE+VGRV++ L ++SKFGY + R + L P + P L H +HP+F R QL S +R+ D Y++ +P+++L + D +G+ +D+ AR + +FEA+EE V Y G+SS S+ +SDP + ++ L+ A A+ RA HS +Q+P NL+ETTGL A + L V+ PL A T + L D
Sbjct: 41 LIDNSANYGDGEAEELVGRVLKE-LEGEGKVTREDVLLVSKFGYIQGQNLKRHDGGLTFPETVDFGPHLKHCIHPEFMRDQLQRSLDRLQTTYLDVYLLHNPEYYLQSEK----------TDQQSGAKPADVV--RARNEMLRRVEQVFEALEEEVQSGGRLQSY-GISSNSFSVDESDPTFLPYQDLIERATRASIRAAERLKKAPPPSHSFSTIQLPGNLVETTGLDNAVKWAHHNHLRVLINRPLNAFTSTHAWRLAD 287
BLAST of mRNA_H-elongata_contig67284.14337.1 vs. uniprot
Match: UPI00191B132F (aldo/keto reductase n=1 Tax=Tumebacillus sp. ITR2 TaxID=2801339 RepID=UPI00191B132F) HSP 1 Score: 98.2 bits (243), Expect = 8.410e-20 Identity = 77/241 (31.95%), Postives = 121/241 (50.21%), Query Frame = 1
Query: 7 SVVDTSANYTGGGSEEMVGRVVERWLASPESYGAPRTKVISKFGYASVR-LRLRPESKLPG-----LIVAAPGLGHSLHPDFYRSQLASSNERMGNIAADAYIVEHPDHHLAFKLGLIGKNGFKGVDLDTGSIASDLRLEEARQSFYDDMTTLFEAMEENVNVNVNGN-GYYGVSSAGLSLPQSDPMHVSWERLVSCAEGAASRAGRERHSLMVVQMPANLLETTGLAAAPAMQSSGLMVM 708
+V+DTS+NY+ GGSEE+VG+V+ ++ E + V+SK GY RL + K G L++ GL H +HP+F QL +S ER+ A D Y++ +P+++L F +NG ++L+EAR+ +Y + F +E V G +YG+SS P + + S ER+ AE + + H V+Q+P NLLE G+ A QS+G V+
Sbjct: 45 NVLDTSSNYSDGGSEELVGKVLAEMTSAGE-IDREQVVVVSKAGYLQGHNYRLSQQRKREGMPFLDLVLYGEGLEHCIHPEFLEDQLTASLERLQMQALDVYLLHNPEYYLGFAK----QNG--------------MQLDEAREEYYRRIELAFRHLEGEVE---RGRIRWYGISSNTFPAPAEEYLFTSLERVWEIAESIS-----DTHHFRVIQLPMNLLERGGVIQA--NQSNGQSVL 256
BLAST of mRNA_H-elongata_contig67284.14337.1 vs. uniprot
Match: G2LIR1_CHLTF (Putative oxidoreductase, aryl-alcohol dehydrogenases like protein n=7 Tax=Chloracidobacterium TaxID=458032 RepID=G2LIR1_CHLTF) HSP 1 Score: 96.7 bits (239), Expect = 2.870e-19 Identity = 78/261 (29.89%), Postives = 111/261 (42.53%), Query Frame = 1
Query: 7 SVVDTSANYTGGGSEEMVGRVVERWLASPESYGAPRTKVISKFGYASV-RLRLRPESKLPGLIVAAPGLGHSLHPDFYRSQLASSNERMGNIAADAYIVEHPDHHLAFKLGLIGKNGFKGVDLDTGSIASDLRLEEARQSFYDDMTTLFEAMEENVNVNVNGNGYYGVSSAGLSLPQSDPMHVSWERLVSCAEGAASRAGRERHSLMVVQMPANLLET--------TGLAAAPAMQSSGLMVMACHPLRAATPEGNFHLVD 762
+++DTSANYT GG+E +GRV+ S +++K GY +RL P ++ PGL H +HP+F +Q+ S ERMG + D ++ +P++ L K G D ++FY + F +E V V +YG+SS L DP HVS R ++ AE H VVQ P NLLET GL + GL +A PL A + L D
Sbjct: 60 NLIDTSANYTDGGAERTIGRVLRETDRSA-------VILVTKAGYIQGDNMRLAQSRNFPEVVRYGPGLWHCIHPEFLATQIERSRERMGVVTLDVLLLHNPEYFLM----ACAKRGITAAD---------------HEAFYRRIREAFAFLETQVAAGVIR--FYGISSNHFPLSADDPTHVSLARCLAQAESVTPN-----HHFRVVQFPLNLLETGAVTEINNDGLTPLEFCATHGLGTLANRPLNAFARQRLVRLAD 287 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig67284.14337.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig67284.14337.1 >prot_H-elongata_contig67284.14337.1 ID=prot_H-elongata_contig67284.14337.1|Name=mRNA_H-elongata_contig67284.14337.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=254bp MNSVVDTSANYTGGGSEEMVGRVVERWLASPESYGAPRTKVISKFGYASVback to top mRNA from alignment at H-elongata_contig67284:782..2448- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig67284.14337.1 ID=mRNA_H-elongata_contig67284.14337.1|Name=mRNA_H-elongata_contig67284.14337.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1667bp|location=Sequence derived from alignment at H-elongata_contig67284:782..2448- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig67284:782..2448- >mRNA_H-elongata_contig67284.14337.1 ID=mRNA_H-elongata_contig67284.14337.1|Name=mRNA_H-elongata_contig67284.14337.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1524bp|location=Sequence derived from alignment at H-elongata_contig67284:782..2448- (Himanthalia elongata Himel1 dioecious)back to top |