mRNA_H-elongata_contig65802.14165.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig65802.14165.1 vs. uniprot
Match: D8LKP1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKP1_ECTSI) HSP 1 Score: 229 bits (584), Expect = 6.250e-69 Identity = 115/177 (64.97%), Postives = 138/177 (77.97%), Query Frame = 1
Query: 1 MINWHFVMQGILLVSHTFALYLFPFVFLLCTYWFVFFKLQVRCFIFIHCPLK----QGEYFPLEAMVYLMFLIQMCRVGKLLHRQCTSDVFLVDWEKGGRGKGQQAPRGGAPGQEG-VSVWRQLLVANEWNRLGTKRRVNPMTSLIWMTFILGAGRLRYSATPQPDLGNTEVGVCYP 516
M+NW F+ QG+L+VSHTF L+LFPF FL+ +Y+FVFFKLQ F+ + + GEYFPLE MV +MF+ Q+ RVG L++RQ TSDVFL+DWEK G KGQQA RGGAP Q G VSVWRQLLVANEWNRLGT+RRVNP+ SL+WM F+LG GRLRY+ATPQPDL +TE G P
Sbjct: 120 MVNWPFLFQGLLMVSHTFVLFLFPFTFLISSYFFVFFKLQQSVFLMLPADREGYGSTGEYFPLELMVTVMFMFQVLRVGSLVYRQITSDVFLIDWEKDGARKGQQAGRGGAPNQGGGVSVWRQLLVANEWNRLGTRRRVNPVFSLVWMAFVLGGGRLRYNATPQPDLTDTEEGELNP 296
BLAST of mRNA_H-elongata_contig65802.14165.1 vs. uniprot
Match: A0A7S1TPB6_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TPB6_9STRA) HSP 1 Score: 117 bits (294), Expect = 2.380e-27 Identity = 65/175 (37.14%), Postives = 96/175 (54.86%), Query Frame = 1
Query: 7 NWHFVMQGILLVSHTFALYLFPFVFLLCTYWFVFFKLQVRCFIFIHCPLKQGEYFPLEAMV----YLMFLIQMCRVGKLLHRQCTSDVFLVDWEKGGRGKGQQAPRGGAPGQEGVSVWRQLLVANEWNRLGTKRRVNPMTSLIWMTFILGAGRLRYSATPQPDLGNTEVGVCYPL 519
++ F+M+ ++L H+F + FP +F LC Y F FFK+Q ++ + + P+ + +LMF Q+ R+ L++ QC +VF VDWEK P+ VS WRQ+L+ANEWN L TKRR + +LIW+ F+L + ATPQP L +T GV PL
Sbjct: 629 SFEFLMRVLVLAMHSFNVTFFPLMFCLCAYLFTFFKMQAEVYLMLPSESAEEGREPISTVFIIFFHLMFFFQLARIIVLVYDQCHVEVFFVDWEK---------PKNA---NHEVSAWRQILIANEWNALQTKRRTSVTATLIWLCFVLIGAGIENVATPQPSLTDTRPGVTNPL 791
BLAST of mRNA_H-elongata_contig65802.14165.1 vs. uniprot
Match: A0A7S2RCM4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RCM4_9STRA) HSP 1 Score: 108 bits (270), Expect = 3.980e-24 Identity = 64/172 (37.21%), Postives = 99/172 (57.56%), Query Frame = 1
Query: 7 NWHFVMQGILLVSHTFALYLFPFVFLLCTYWFVFFKLQVRCFIFIHCPLK------QGEYFPLEAMVYLMFLIQMCRVGKLLHRQCTSDVFLVDWEKGGRGKGQQAPRGGAPGQEGVSVWRQLLVANEWNRLGTKRRVNPMTSLIWMTFILGAGRLRYSATPQPDLGNTEVG 504
W+F + L+ H + L LFPF+FL CT WFVFFK+Q ++ + P K + EY+ E ++ +F Q + +++ QC +DVF VD E + GG+ GQ VSVWR++ VANEW L T+RR + +L+++ F++ L+Y +TPQPD+ N + G
Sbjct: 667 TWYFWCSLVQLL-HCWNLMLFPFIFLYCTSWFVFFKMQDTAYLLL--PPKNEKYGNESEYYLAEVVIICLFWFQSAYLLHIIYLQCNADVFFVDMEN-------KKNSGGSSGQR-VSVWRRIFVANEWAELQTERRTSMTFTLVFLCFVMVGLDLQYLSTPQPDIYNLDRG 827
BLAST of mRNA_H-elongata_contig65802.14165.1 vs. uniprot
Match: A0A835Z317_9STRA (Transmembrane protein 67-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z317_9STRA) HSP 1 Score: 107 bits (266), Expect = 1.110e-23 Identity = 60/157 (38.22%), Postives = 90/157 (57.32%), Query Frame = 1
Query: 34 LLVSHTFALYLFPFVFLLCTYWFVFFKLQVRCFIFIHCPLKQ----GEYFPLEAMVYLMFLIQMCRVGKLLHRQCTSDVFLVDWEKGGRGKGQQAPRGGAPGQEGVSVWRQLLVANEWNRLGTKRRVNPMTSLIWMTFILGAGRLRYSATPQPDLGN 492
L+ +H F L P F +C F FKLQ + +I + ++ GEY PL+A+++ +F +Q+ V +L+ QCT+ VF +DWE+GG+ G G SVWRQLLVAN+WN L ++RR N +L+ M F+L +Y+A P P L +
Sbjct: 121 LIGAHAFVAVLLPLTFAICGALFALFKLQSQVYIVMPADREEYGRKGEYGPLKALLHTLFFLQLVHVLAVLYSQCTATVFFLDWERGGK-----------KGAGGGSVWRQLLVANKWNELQSRRRSNTPLTLLLMVFVLVGLGQQYNAAPWPSLAD 266
BLAST of mRNA_H-elongata_contig65802.14165.1 vs. uniprot
Match: A0A0L0HPB1_SPIPD (Uncharacterized protein n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0HPB1_SPIPD) HSP 1 Score: 106 bits (264), Expect = 2.490e-23 Identity = 61/171 (35.67%), Postives = 96/171 (56.14%), Query Frame = 1
Query: 7 NWHFVMQGILLVSHTFALYLFPFVFLLCTYWFVFFKLQVRCFIFIHCPLKQGEYFPLEAMVYLMFLIQMCRVGKLLHRQCTSDVFLVDWEKGGRGKGQQAPRGGAPGQEGVSVWRQLLVANEWNRLGTKRRVNPMTSLIWMTFILGAGRLRYSATPQPDLGNTEVGVCYPL 519
+++F+ + IL+++ A LF F+ + YWF F+K Q + + P + A+V + Q + K L+ QCT D+F +DWE+ RGK A G P VSVWR + + NEWN++ T RRVN SL+ M FI+ ++RY+ATPQP++ + G+ P+
Sbjct: 533 DFNFLSRCILILAGCLAPLLFWFLLAVSAYWFFFYKNQTVMKVLL--PWSDSDLHKFNAIVVATLVCQSAYIIKQLYEQCTIDIFFIDWERS-RGKVMAAGGEGKPRLAAVSVWRSIFMMNEWNKMQTYRRVNIGFSLLAMYFIVEGLKVRYAATPQPNIHDLTPGLVSPI 700
BLAST of mRNA_H-elongata_contig65802.14165.1 vs. uniprot
Match: F0XYJ9_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XYJ9_AURAN) HSP 1 Score: 95.1 bits (235), Expect = 1.990e-19 Identity = 58/151 (38.41%), Postives = 82/151 (54.30%), Query Frame = 1
Query: 67 FPFVFLLCTYWFVFFKLQVRCFIFIHCPL----KQGEYFPLEAMVYLMFLIQMCRVGKLLHRQCTSDVFLVDWEKGGRGK-GQQAPRGGAPGQEGVSVWRQLLVANEWNRLGTKRRVNPMTSLIWMTFILGAGRLRYSATPQPDLGNTEVG 504
FPFVF+LC+Y+FVFFKLQ + + K EY+P+ + M+ Q V +++ R C ++F VDWE + G+ AP VSVWR + VANE++ + T RR + L + F L A L +ATPQPDLG+ G
Sbjct: 664 FPFVFILCSYYFVFFKLQEAAYTLLPAENRHDGKDFEYYPVRTAIISMWAFQTAVVLQIVVRMCQMEIFFVDWEPPRKPDVGKAAP---------VSVWRTIFVANEFSEMMTARRTSTHFVLFCLGFFLVAMGLENNATPQPDLGDLTAG 805
BLAST of mRNA_H-elongata_contig65802.14165.1 vs. uniprot
Match: A0A7S2WSC8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2WSC8_9STRA) HSP 1 Score: 91.7 bits (226), Expect = 3.120e-19 Identity = 49/143 (34.27%), Postives = 81/143 (56.64%), Query Frame = 1
Query: 19 VMQGILLVSHTFALYLFPFVFLLCTYWFVFFKLQVRCFIFIHCPLKQ----GEYFPLEAMVYLMFLIQMCRVGKLLHRQCTSDVFLVDWEKGGRGKGQQAPRGGAPGQEGVSVWRQLLVANEWNRLGTKRRVNPMTSLIWMTF 435
V++ + + HT +++ FPF+ +C+++FVFFKLQ +I + + EYF A + ++F Q + L++RQC D+F +DWEK KG+ A VS+WR ++V NEWNRL + R+ + +L W+ F
Sbjct: 136 VIKSMSFLCHTISIFGFPFILAICSFFFVFFKLQEDVYIMLPSDSEYYGIGNEYFFFSASIQIIFWSQTVYISHLIYRQCQVDIFFIDWEKS---KGRYAD---------VSLWRMIMVVNEWNRLQSARKTSIEFNLFWIAF 266
BLAST of mRNA_H-elongata_contig65802.14165.1 vs. uniprot
Match: A0A507CGP8_9FUNG (Uncharacterized protein n=1 Tax=Synchytrium endobioticum TaxID=286115 RepID=A0A507CGP8_9FUNG) HSP 1 Score: 94.4 bits (233), Expect = 3.560e-19 Identity = 55/141 (39.01%), Postives = 78/141 (55.32%), Query Frame = 1
Query: 94 YWFVFFKLQVRCFIFIHCPLKQGEYFPLEAMVYLMFLIQMCRVGKLLHRQCTSDVFLVDWEKGGRGK----------GQQAPRGGAPGQEGVSVWRQLLVANEWNRLGTKRRVNPMTSLIWMTFILGAGRLRYSATPQPDL 486
Y+ +FFK Q +F+ P G+ A + +F +Q+ V +++QCT DVF +DWEK RG G A R AP VSVWR + +AN+WN L T RRVN ++W+ F++ R+RY ATPQPD+
Sbjct: 595 YFILFFKGQAGLGVFL--PYSVGDMITFNAALAAIFTLQLMYVIMTVYQQCTIDVFFIDWEKP-RGHTRESAATLLDGSHASRAKAP----VSVWRSVFIANQWNALQTYRRVNLEFCVVWVYFLVEGCRIRYVATPQPDI 728
BLAST of mRNA_H-elongata_contig65802.14165.1 vs. uniprot
Match: A0A507CNZ5_9FUNG (Uncharacterized protein n=1 Tax=Synchytrium endobioticum TaxID=286115 RepID=A0A507CNZ5_9FUNG) HSP 1 Score: 94.4 bits (233), Expect = 3.680e-19 Identity = 55/141 (39.01%), Postives = 78/141 (55.32%), Query Frame = 1
Query: 94 YWFVFFKLQVRCFIFIHCPLKQGEYFPLEAMVYLMFLIQMCRVGKLLHRQCTSDVFLVDWEKGGRGK----------GQQAPRGGAPGQEGVSVWRQLLVANEWNRLGTKRRVNPMTSLIWMTFILGAGRLRYSATPQPDL 486
Y+ +FFK Q +F+ P G+ A + +F +Q+ V +++QCT DVF +DWEK RG G A R AP VSVWR + +AN+WN L T RRVN ++W+ F++ R+RY ATPQPD+
Sbjct: 595 YFILFFKGQAGLGVFL--PYSVGDMITFNAALAAIFTLQLMYVIMTVYQQCTIDVFFIDWEKP-RGHTRESAATLLDGSHASRAKAP----VSVWRSVFIANQWNALQTYRRVNLEFCVVWVYFLVEGCRIRYVATPQPDI 728
BLAST of mRNA_H-elongata_contig65802.14165.1 vs. uniprot
Match: A0A0H5QQ30_9EUKA (Uncharacterized protein n=1 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5QQ30_9EUKA) HSP 1 Score: 89.7 bits (221), Expect = 1.350e-17 Identity = 59/159 (37.11%), Postives = 81/159 (50.94%), Query Frame = 1
Query: 76 VFLLCTYWFVFFKLQVRCFIFIHCPLKQGEYFPLEAMVYLMF--LIQMCRVGKLLHRQCTSDVFLVDWEKGGRGKGQQAPRGGAPGQEGVSVWRQLLVANEWNRLGTKRRVNPMTSLIWMTFILGAGRLRYSATPQPDL----GNTEVGVCYPLCFNLG 534
VF++CTY+ +FFK Q FI + Q EY ++++ F +CRV L +Q + D+F +DWEK G + GA VSVWR+L VANEWN L T R VN LI + F+L L Y AT QP L G+ + + + G
Sbjct: 267 VFIMCTYFLLFFKCQSTAFILLPLEDSQEEYVFTTVVIFVFFGKCFSICRV---LWQQISVDLFFMDWEKPKLVSGNET---GA--SSSVSVWRKLFVANEWNELATARNVNVDLLLIVLLFLLRGINLEYLATSQPSLSLTPGSASINILLRFAVSSG 417 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig65802.14165.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig65802.14165.1 >prot_H-elongata_contig65802.14165.1 ID=prot_H-elongata_contig65802.14165.1|Name=mRNA_H-elongata_contig65802.14165.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=180bp MINWHFVMQGILLVSHTFALYLFPFVFLLCTYWFVFFKLQVRCFIFIHCPback to top mRNA from alignment at H-elongata_contig65802:151..1121+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig65802.14165.1 ID=mRNA_H-elongata_contig65802.14165.1|Name=mRNA_H-elongata_contig65802.14165.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=971bp|location=Sequence derived from alignment at H-elongata_contig65802:151..1121+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig65802:151..1121+ >mRNA_H-elongata_contig65802.14165.1 ID=mRNA_H-elongata_contig65802.14165.1|Name=mRNA_H-elongata_contig65802.14165.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1080bp|location=Sequence derived from alignment at H-elongata_contig65802:151..1121+ (Himanthalia elongata Himel1 dioecious)back to top |