mRNA_H-elongata_contig65449.14127.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig65449.14127.1 vs. uniprot
Match: D8LK51_ECTSI (UBC core domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LK51_ECTSI) HSP 1 Score: 325 bits (832), Expect = 4.530e-106 Identity = 157/208 (75.48%), Postives = 175/208 (84.13%), Query Frame = 3
Query: 333 SLEDYRLTIEYKHLKQNAPGGVIVVPSLNHLRLWYGVIFVRRGHYANGVFKFRVELPPDYNDVGTRPVIRFTSSVFNPMVSPTTGEVDLQHWFPEWVPARQHYMVAALTQVKKMFYTKDFSLSRAANPEAQALFQNNKRAFLERVEACVRESQEIVYDNEEGSSLRFTEPKPAHDKLREKIFGADPTARLSPLFPGAEDMPEGITVTT 956
+L+DYRLTIEYKHLKQNAPGGV V+PS+NHLR+WYGVIFVRRGHYANGVFKFRVELPPDYND GT P+IRFTSSVFNPMVSP TGE+DL+ FPEW+P + HYMV ALT +KK+FY KDFS R ANPEAQALFQ++KR FLERVEACVRESQE VY+NEEGSSLRFTEPKPAHDKLREKI G D A+ S G ++ TT
Sbjct: 11 TLKDYRLTIEYKHLKQNAPGGVFVIPSVNHLRIWYGVIFVRRGHYANGVFKFRVELPPDYNDAGTWPIIRFTSSVFNPMVSPITGELDLRSVFPEWLPGK-HYMVTALTYLKKVFYMKDFSFPRPANPEAQALFQDDKRGFLERVEACVRESQETVYENEEGSSLRFTEPKPAHDKLREKILGTDQAAKSSLPPTGTRELKVSTAATT 217
BLAST of mRNA_H-elongata_contig65449.14127.1 vs. uniprot
Match: A0A7S2V268_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V268_9STRA) HSP 1 Score: 236 bits (603), Expect = 3.850e-71 Identity = 112/185 (60.54%), Postives = 140/185 (75.68%), Query Frame = 3
Query: 333 SLEDYRLTIEYKHLKQNAPGGVIVVPSLNHLRLWYGVIFVRRGHYANGVFKFRVELPPDYNDVGTRPVIRFTSSVFNPMVSPTTGEVDLQHWFPEWVPARQHYMVAALTQVKKMFYTKDFSLSRAANPEAQALFQNNKRAFLERVEACVRESQEIVYDNEEGSSLRFTEPKPAHDKLREKIFGAD 887
+L DY+LTIEYKHLKQ+APGGV V+PS LR+W+GVIFVRRGHY+ G+FKFRV+LP +YN T P + FTS VFNP+V P TGE+DL+ +PEW P R HYMV LT +KK+FY K F ANP AQ LF +NK FLE V CVRES+E ++ N+ GSSL+F+EPKPAH+ LR+ IF ++
Sbjct: 39 ALRDYKLTIEYKHLKQHAPGGVFVIPSFESLRVWWGVIFVRRGHYSKGIFKFRVDLPDEYNGPNTWPKVTFTSRVFNPLVFPQTGELDLKSAYPEWNPER-HYMVTVLTFLKKIFYMKSFDGPNPANPVAQNLFHSNKVEFLEEVNNCVRESKENIFKNDPGSSLKFSEPKPAHESLRKSIFESE 222
BLAST of mRNA_H-elongata_contig65449.14127.1 vs. uniprot
Match: A0A836CDQ7_9STRA (Ubiquitin-conjugating enzyme/RWD-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDQ7_9STRA) HSP 1 Score: 219 bits (557), Expect = 7.300e-65 Identity = 102/184 (55.43%), Postives = 134/184 (72.83%), Query Frame = 3
Query: 333 SLEDYRLTIEYKHLKQNAPGGVIVVPSLNHLRLWYGVIFVRRGHYANGVFKFRVELPPDYNDVGTRPVIRFTSSVFNPMVSPTTGEVDLQHWFPEWVPARQHYMVAALTQVKKMFYTKDFSLSRAANPEAQALFQNNKRAFLERVEACVRESQEIVYDNEEGSSLRFTEPKPAHDKLREKIFGA 884
+L+DY++ +EYKHL Q+APGGV V P L+ LR+W+GVIFVRRG YANG+FKF VELP +Y D G P + F S+VFNP+V P+ GE+DL+ P W PA M+ +T +KK+FYTKDF+L+ NPEAQ +F++NK F ER ACV ES Y++ GSSL+FTEP+PAHD + +I GA
Sbjct: 25 ALKDYKIAVEYKHLWQHAPGGVYVTPDLDDLRIWHGVIFVRRGMYANGMFKFSVELPQNYGDAGAWPRLVFMSTVFNPLVKPSNGELDLRLMMPGWNPAGGDCMLKVITYMKKIFYTKDFALAAPPNPEAQRMFRDNKSGFAERAAACVEESLSRRYESPPGSSLKFTEPRPAHDSVAARILGA 208
BLAST of mRNA_H-elongata_contig65449.14127.1 vs. uniprot
Match: A0A1V9YIR1_9STRA (UBC core domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YIR1_9STRA) HSP 1 Score: 204 bits (520), Expect = 7.220e-59 Identity = 104/240 (43.33%), Postives = 155/240 (64.58%), Query Frame = 3
Query: 297 SNLDNVTRHDRLSLEDYRLTIEYKHLKQNAPGGVIVVPSLNHLRLWYGVIFVRRGHYANGVFKFRVELPPDYNDVGTRPVIRFTSSVFNPMVSPTTGEVDLQHWFPEWVPARQHYMVAALTQVKKMFYTKDFS--LSRAANPEAQALFQNNKRAFLERVEACVRESQEIVYDNEEGSSLRFTEPKPAHDKLREKIF---GADPTARLSPLFPGAEDMPEGITVT-----TEDSEEASGLE 986
+NL ++ ++ +++DY L IEYKH+KQ+ P G+ V+PS + RLW+GVIF+ +G Y NG+FKF + LP DYN +GT P + F + VF+P V+P T E+DL FP W P HY+V+ L +K +FYTK+F+ L ANP A +F+ + ++E+++ACV +S E +Y NE GSSLRFT+P PAH+KLR++ G TA GA+D P+ + +T +E+ EE +E
Sbjct: 29 ANLTSLHQYRTQTMKDYGLMIEYKHMKQHVPSGIYVLPSFDKPRLWHGVIFIHQGLYRNGIFKFSIHLPDDYNGIGTYPRVVFYTKVFHPFVNPDTNELDLLPKFPTWDPDL-HYIVSVLVYMKSIFYTKEFASDLRNVANPRALEMFRRHPETYVEQIDACVEKSLETMYQNEPGSSLRFTKPIPAHEKLRQEFLQQLGGQDTA-------GADDSPDDVHMTAPIPASEEEEEYKAVE 260
BLAST of mRNA_H-elongata_contig65449.14127.1 vs. uniprot
Match: A0A7R9W3Q1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W3Q1_9STRA) HSP 1 Score: 201 bits (511), Expect = 5.440e-58 Identity = 98/178 (55.06%), Postives = 131/178 (73.60%), Query Frame = 3
Query: 333 SLEDYRLTIEYKHLKQNAPGGVIVVPSLNHLRLWYGVIFVRRGHYANGVFKFRVELPPDYNDVGTRPVIRFTSSVFNPMVSPTTGEVDLQHWFPEWVPARQHYMVAALTQVKKMFYTKDFSLSRAANPEAQALFQNNKRAFLERVEACVRESQEIVYDNEEGSSLRFTEPKPAHDKLR 866
SL DY++TIEYKHLKQ+APGGV ++PSL+ LR+++GVIFVRRG + NG+FKFRV+LPP YNDV P I F+S V+NP V+P TGE+D+Q +P W P R HY+V LT +KK+FY K F ANP+A+ L ++N A+ ++VEACVRESQ V+ NE + +F+E + H LR
Sbjct: 54 SLRDYKVTIEYKHLKQHAPGGVYLIPSLDDLRVFHGVIFVRRGPFTNGIFKFRVKLPPRYNDVNAWPQIVFSSYVYNPHVNPETGELDVQAAYPTWDPHR-HYLVTVLTYLKKIFYMKGFGEEARANPDARDLARSNPPAYRKKVEACVRESQRSVFVNEPDCTAKFSEDEVCHQVLR 230
BLAST of mRNA_H-elongata_contig65449.14127.1 vs. uniprot
Match: T0QFC9_SAPDV (UBC core domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0QFC9_SAPDV) HSP 1 Score: 200 bits (509), Expect = 3.120e-57 Identity = 92/196 (46.94%), Postives = 137/196 (69.90%), Query Frame = 3
Query: 297 SNLDNVTRHDRLSLEDYRLTIEYKHLKQNAPGGVIVVPSLNHLRLWYGVIFVRRGHYANGVFKFRVELPPDYNDVGTRPVIRFTSSVFNPMVSPTTGEVDLQHWFPEWVPARQHYMVAALTQVKKMFYTKDFS--LSRAANPEAQALFQNNKRAFLERVEACVRESQEIVYDNEEGSSLRFTEPKPAHDKLREKIF 878
+NL ++ ++ +++DY L IEYKH+KQ+ P G+ V+PS + RLW+GVIF+ +G Y NG+FKF + LP DYN +GT P + F + VF+P V+P T E+DL FP W P HY+V+ L +K +FYTK+F+ L ANP A +F+ + +++E+++ACV +S E +Y NE GSSLRFT+P PAH+KLR++
Sbjct: 31 ANLTSLHQYRTQTMKDYGLMIEYKHMKQHVPSGIYVLPSFDKPRLWHGVIFIHQGLYRNGIFKFSIHLPDDYNGIGTYPRVEFYTKVFHPFVNPDTNELDLLPKFPTWDPDL-HYIVSVLVYMKSIFYTKEFASDLRNVANPRALEMFRRHPESYVEQIDACVEKSLETMYQNEPGSSLRFTKPIPAHEKLRQEFL 225
BLAST of mRNA_H-elongata_contig65449.14127.1 vs. uniprot
Match: A0A7S1ZU80_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZU80_TRICV) HSP 1 Score: 199 bits (507), Expect = 3.470e-57 Identity = 100/180 (55.56%), Postives = 125/180 (69.44%), Query Frame = 3
Query: 333 SLEDYRLTIEYKHLKQNAPGGVIVVPSLNHLRLWYGVIFVRRGHYANGVFKFRVELPPDYNDVGTRPVIRFTSSVFNPMVSPTTGEVDLQHWFPEWVPARQHYMVAALTQVKKMFYTKDFSLSR-AANPEAQALFQNNKRAFLERVEACVRESQEIVYDNEEGSSLRFTEPKPAHDKLRE 869
+L DY++TIEYKHLKQ+APGGV +VPSL LRL++GV+FVRRG + NGVFKFRV LPP YND P I F S V+NP V P TGE+D++ +P W P R HY+V LT +KK+FY K F ANPEA+ L + + + + RVEACVRESQ V+ NEEG + F E + H LRE
Sbjct: 35 ALRDYKVTIEYKHLKQHAPGGVYLVPSLTDLRLFHGVVFVRRGPFTNGVFKFRVSLPPRYNDFNAHPSIHFGSYVYNPHVDPETGELDVKGAYPTWDPHR-HYLVTVLTYLKKIFYMKTFGTDEPVANPEARELVRRDPKEYRRRVEACVRESQRSVFVNEEGCTAEFHEDRVCHQILRE 213
BLAST of mRNA_H-elongata_contig65449.14127.1 vs. uniprot
Match: A0A024G8I5_9STRA (UBC core domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G8I5_9STRA) HSP 1 Score: 198 bits (504), Expect = 8.770e-57 Identity = 95/196 (48.47%), Postives = 133/196 (67.86%), Query Frame = 3
Query: 303 LDNVTRHDRLSLEDYRLTIEYKHLKQNAPGGVIVVPSLNHLRLWYGVIFVRRGHYANGVFKFRVELPPDYNDVGTRPVIRFTSSVFNPMVSPTTGEVDLQHWFPEWVPARQHYMVAALTQVKKMFYTKDFS--LSRAANPEAQALFQNNKRAFLERVEACVRESQEIVYDNEEGSSLRFTEPKPAHDKLREKIFGA 884
+ ++ R+ +++DY L IEYKHL+Q+ P G+ V+PS ++ R+WYG IF+ +G Y NG+FKF +E+P DYN GT P I F+SS+F+P VSP T ++DL+ FPEW P HYMVAALT +K +FY K+F L ANP A LF + ++ VE CV S E V+D+E SS+RFT P PAH+ LR++ F +
Sbjct: 29 MTSLQRYRSQTMKDYGLMIEYKHLRQHVPAGIYVLPSFDNSRIWYGTIFIHQGLYRNGIFKFTIEIPSDYNGPGTYPSIVFSSSIFHPYVSPQTRKLDLKAKFPEWDP-ELHYMVAALTFLKSIFYMKEFPEILDNVANPNALKLFHDELETYVTNVERCVSGSLESVFDDEPNSSIRFTRPIPAHENLRKEFFAS 223
BLAST of mRNA_H-elongata_contig65449.14127.1 vs. uniprot
Match: A0A7S1VY26_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VY26_9STRA) HSP 1 Score: 196 bits (497), Expect = 9.450e-56 Identity = 94/181 (51.93%), Postives = 130/181 (71.82%), Query Frame = 3
Query: 333 SLEDYRLTIEYKHLKQNAPGGVIVVPSLNHLRLWYGVIFVRRGHYANGVFKFRVELPPDYNDVGTRPVIRFTSSVFNPMVSPTTGEVDLQHWFPEWVPARQHYMVAALTQVKKMFYTKDFSLSRAANPEAQALFQNNKRAFLERVEACVRESQEIVYDNEEGSSLRFTEPKPAHDKLREKI 875
+L DY++TIEYKHL+Q+APGGV ++PSL LR +YGVIFVRRG + NG+FKF+++LPP YND+ T P I FTS+VFNP V P TGE+D++ +P W P R HY+V LT +KK+FY K F AN EA+ L + A+ +V+ CVR+SQ+ V+ NE+G + +FTE +H LR+ +
Sbjct: 46 ALRDYKVTIEYKHLRQHAPGGVYLIPSLTDLRHFYGVIFVRRGPFTNGIFKFQLKLPPTYNDLNTWPTITFTSNVFNPHVHPKTGELDVKSAYPRWDPHR-HYLVTILTFLKKIFYVKTFGPDAKANKEAKKLAEKEPAAYRLKVDECVRDSQKDVFVNEDGCTAKFTEETLSHRVLRDLL 225
BLAST of mRNA_H-elongata_contig65449.14127.1 vs. uniprot
Match: F0W1H7_9STRA (Uncharacterized protein AlNc14C7G945 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W1H7_9STRA) HSP 1 Score: 196 bits (497), Expect = 1.030e-55 Identity = 91/196 (46.43%), Postives = 135/196 (68.88%), Query Frame = 3
Query: 303 LDNVTRHDRLSLEDYRLTIEYKHLKQNAPGGVIVVPSLNHLRLWYGVIFVRRGHYANGVFKFRVELPPDYNDVGTRPVIRFTSSVFNPMVSPTTGEVDLQHWFPEWVPARQHYMVAALTQVKKMFYTKDF--SLSRAANPEAQALFQNNKRAFLERVEACVRESQEIVYDNEEGSSLRFTEPKPAHDKLREKIFGA 884
+ ++ R+ +++DY L IEYKHL+Q+ P G+ V+PS ++ R+W+G IF+ +G Y NG+FKF +E+P DYN GT P I F+++VF+P VSP T ++DL+ FPEW P HYMVAALT +K +FY K+F +++ ANP A LF + ++ VE CV S E VY+++ SS+RFT P PAH+ LR++ F +
Sbjct: 29 MTSLQRYRSQTMKDYGLMIEYKHLRQHVPAGIYVLPSFDNSRIWFGTIFIHQGLYRNGIFKFTIEIPSDYNGPGTYPSITFSTAVFHPYVSPQTRKLDLKAKFPEWDP-ELHYMVAALTFLKSIFYMKEFPETINNVANPNALKLFHDELETYVTNVERCVSGSLENVYEDDSSSSIRFTRPTPAHENLRKEFFAS 223 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig65449.14127.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig65449.14127.1 >prot_H-elongata_contig65449.14127.1 ID=prot_H-elongata_contig65449.14127.1|Name=mRNA_H-elongata_contig65449.14127.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=150bp MVSPTTGEVDLQHWFPEWVPARQHYMVAALTQVKKMFYTKDFSLSRAANPback to top mRNA from alignment at H-elongata_contig65449:9..2784- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig65449.14127.1 ID=mRNA_H-elongata_contig65449.14127.1|Name=mRNA_H-elongata_contig65449.14127.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2776bp|location=Sequence derived from alignment at H-elongata_contig65449:9..2784- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig65449:9..2784- >mRNA_H-elongata_contig65449.14127.1 ID=mRNA_H-elongata_contig65449.14127.1|Name=mRNA_H-elongata_contig65449.14127.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=900bp|location=Sequence derived from alignment at H-elongata_contig65449:9..2784- (Himanthalia elongata Himel1 dioecious)back to top |