mRNA_H-elongata_contig6483.14071.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig6483.14071.1 vs. uniprot
Match: D7G3E7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3E7_ECTSI) HSP 1 Score: 631 bits (1628), Expect = 8.860e-207 Identity = 429/956 (44.87%), Postives = 507/956 (53.03%), Query Frame = 2
Query: 947 SSGRRLELLLHNVSHKDLALSLRRTLYPAAVVGKG--TGERY--NAIDAPDTALARPKFSRFKASSEIILQKLVEMRKSSGSEPPPAVCAVYRRGEEPEQEREAELALGSAKDTGGVDNDPSNPSAADNRENHNCDDMDGTNAVNGKQREXXXXXXXXXXXRQLSVGFDLDTNPIPVSDLAGYRVRSRDLDRLTSADEKHASNSHIART--RQDSEGGDIAHAWRYP----------------LVARGPGDAMSXXXXXXXXXXXXXGG------------------EGFITGVYFPLLSVLMPRWLKQLAENGN-CNAAKMILLVSGVGKPRSQEHRVEDNSTEVTAVLMEAYLKRHYPDVRVVRLHSNTNIFRYDDNIRFVKTELLPFLETERSRTAERYGSAWQDMMHVTMSFADGSPARISSIKAALRPFRPSFIHIWELKTFWHEKIICEDDVEVHTFDEIDMLPPIPAPEVDPSTALVIAEMLRLKEDWERVLAAP---------------SPPQRAIAGRDATNDLASFWLRKTKKPVLAVLLVQKKGCQPKLYRGTNMEVSMPTGSLCAERNVIGSALSDEFSLLRREIKAVAVLSLPRLDKISSSNKITASAVLSSAAVAPTAGDGENYKDCLNAAAILLTRGGGGRS-LVGLTPAAISESESSMQSRNVSPFEVTPTLTTSPTWPRRLGGERVSRGAAGTLGRHGTISFWDSRDEDCREGGGGDVQGVAAADKKRLEGVPQVKCALHHVTTHDRFVILPSRRPLCLMNIDTIPLVIPRNSTEFACQELFAAEPEDRASKRATTEASPHPAEALESPSDGQQRQKTRGRETRTEEEDHGAIVGPRSTNPRFRSKSCEPLVSRAKSKQALEGGGDGESGRSEGVPARQIHSNVVARVPAKTPCSNPLKPCGACMEWLKKIAEVNPDFKVITFTDSFCSGVYIENVAQV 3643
S+GRRLE+L+HN+SHKD+ LSLRRT AA + + TGE N IDA DTALARPKFS FK SSE+IL KL E+R + G EPPPAVC VYRRGE +L G PS P RE +SVGFDLD PIP+ DLAGYRVRS DLDRL A + +S++ + + R+DS L + PG G E FI+GVYFPLLSVLMP+W++ LA +G+ +++K +LLVSGVG+PR++EHR+EDNSTEVTAVLMEA+LKRH+P VRVVR+HS+TNIFRYDDNIRFVKTELLP L ERS+ AE+YG WQDMMH+TMSFADGSPARISSI AALR F+PSFIHIWELKTFWHEK ICEDDVEVHTF++IDM PP+P EVD TAL+IAEM RL++D ERVLAAP A+ G D +DLASFWLRKTKKPVLAVLLVQKKG +P+L+RGTNMEVSMPTGSLCAERNVIGSAL+ + SLLRR+IKAVAVLS+ L +S TA+AV P + K+ + I GGGRS G + S S SP +TP + SP L R T G A DK+RLEGV QV+ R+ + +I + P KR G G +P S R S++VA VP +T CSNPLKPCGACMEWLKKIAEVNPDFKVITFTDS C GVYIE+VAQ+
Sbjct: 105 SAGRRLEILVHNISHKDMVLSLRRTRKAAAAMPRRPPTGEEAMSNVIDAADTALARPKFSLFKRSSELILHKLQEIRAAGGREPPPAVCPVYRRGE-------PDLRSGP----------PSAP------------------------RE------------SVSVGFDLDDTPIPIFDLAGYRVRSEDLDRLAPAAGRRSSSNLLRKVLNRRDSXXLXXXXXXXXXXXXXXXXXXXXXTGRLLPVQDPGPRQLLLQQQPQLQQLKEDGSXXXXXXXXXXXXXXXXXEAFISGVYFPLLSVLMPKWMELLARSGDDVDSSKTVLLVSGVGQPRNEEHRLEDNSTEVTAVLMEAFLKRHFPTVRVVRVHSDTNIFRYDDNIRFVKTELLPLLNAERSQMAEKYGEDWQDMMHITMSFADGSPARISSINAALRHFKPSFIHIWELKTFWHEKAICEDDVEVHTFEDIDMQPPMPVSEVDAPTALIIAEMQRLRDDLERVLAAPPRGAYTRQAFDAPAGDANGEAVVGGDTRDDLASFWLRKTKKPVLAVLLVQKKGGRPQLFRGTNMEVSMPTGSLCAERNVIGSALTSDLSLLRRDIKAVAVLSVAHLGGPPASTATTAAAV-------PI----DERKEGASLTGITAVDSGGGRSGWPGAAGMGSAVGSSLTTSCAPSPLSLTPAMKVSP---------------KSALLRTET--------------------GAGAEDKERLEGVRQVR-----------------RKTKVVRSIASTP-------------------------KRGVGSG--------------------------------GIAAGGWEKSPLTDSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXRHPRTSRSSIVAHVPPETLCSNPLKPCGACMEWLKKIAEVNPDFKVITFTDSRCGGVYIEDVAQI 887
BLAST of mRNA_H-elongata_contig6483.14071.1 vs. uniprot
Match: A0A6H5K1D9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1D9_9PHAE) HSP 1 Score: 521 bits (1342), Expect = 3.920e-168 Identity = 322/570 (56.49%), Postives = 380/570 (66.67%), Query Frame = 2
Query: 947 SSGRRLELLLHNVSHKDLALSLRRTLYPAAVVGKG--TGERY--NAIDAPDTALARPKFSRFKASSEIILQKLVEMRKSSGSEPPPAVCAVYRRGEEPEQEREAELALGSAKDTGGVDNDPSNPSAADNRENHNCDDMDGTNAVNGKQREXXXXXXXXXXXRQLSVGFDLDTNPIPVSDLAGYRVRSRDLDRLTSADEKHASNSHIART--RQDSEG----GD---------------------IAHAWRYPLVAR-----------GPGDAMSXXXXXXXXXXXXXG----GEGFITGVYFPLLSVLMPRWLKQLAENGN-CNAAKMILLVSGVGKPRSQEHRVEDNSTEVTAVLMEAYLKRHYPDVRVVRLHSNTNIFRYDDNIRFVKTELLPFLETERSRTAERYGSAWQDMMHVTMSFADGSPARISSIKAALRPFRPSFIHIWELKTFWHEKIICEDDVEVHTFDEIDMLPPIPAPEVDPSTALVIAEMLRLKEDWERVLAAPSPPQRAIAGRDATNDLASFWLRKTKKPVLAVLLVQKKGCQPKLYRGTNMEVSMPTGSLCAER 2515
S+GRRLE+L+HN+SHKD+ LSLRRT AA + + TGE N IDA DTALARPKFS FK SSE+IL KL +MR + GSEPPPAVC VYRRGE L G PS+A RE +SVGFDLD PIP+ DLAGYRVRS DLDRL A + +S++ + + R+DS G G + R L+ + G GD XXXXXXXXXXXXX GE FI+GVYFPLLSVLMP+W++ LA +G+ +++K +LLVSGVG+PR++EHR+EDNSTEVTAVLMEA+LKRH+P VRVVR+HS+TNIFRYDDNIRFVKTELLP L ERS+ AE+YG WQDMMH+TMSFADGSPARISSI AALR F+PSFIHIWELKTFWHEK ICEDDV HTF++IDM PP+P EVD TAL+IAEM RL++D ERVLAAP P+ A+ G DA +DLA+FWLRKTKKPVLAVLLVQKKG QP+L+RGTNME S + R
Sbjct: 103 SAGRRLEILVHNISHKDMVLSLRRTREAAAAMPRRPPTGEEAMSNVIDAADTALARPKFSLFKRSSELILHKLQDMRAAGGSEPPPAVCPVYRRGE-------PSLRSG--------------PSSA--------------------PRE------------SVSVGFDLDDTPIPIFDLAGYRVRSEDLDRLAPAAGRRSSSNLLRKVLNRRDSSGLFLVGSGXXXXXXXXXXXXXXTGRLLPVQDPGRRQLLRQQQPQLQQLKEDGSGDGXXXXXXXXXXXXXXXXXXXEGEAFISGVYFPLLSVLMPKWMELLAGSGDDVDSSKTVLLVSGVGQPRNEEHRLEDNSTEVTAVLMEAFLKRHFPSVRVVRVHSDTNIFRYDDNIRFVKTELLPLLNAERSQMAEKYGEDWQDMMHITMSFADGSPARISSINAALRHFKPSFIHIWELKTFWHEKAICEDDV--HTFEDIDMQPPMPVSEVDAPTALIIAEMQRLRDDLERVLAAP--PRGAVVGGDARDDLATFWLRKTKKPVLAVLLVQKKGGQPQLFRGTNMEASFNAHGIAVRR 615
BLAST of mRNA_H-elongata_contig6483.14071.1 vs. uniprot
Match: W7U454_9STRA (Cytidine deaminase-like protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U454_9STRA) HSP 1 Score: 368 bits (945), Expect = 7.180e-107 Identity = 322/943 (34.15%), Postives = 429/943 (45.49%), Query Frame = 2
Query: 956 RRLELLLHNVSHKDLALSL------------------RRTLYPAAVVGKG-------TGERY---NAIDAPDTALARPKFSRFKASSEIILQKLVEMRKSSGSEPPPAVCAVYRRGEEPEQEREAELALGSAKDTGGVDNDPSNPSAADNRENHNCDDMDGTNAVNGK---QREXXXXXXXXXXXRQLSVGFDLDTNPIPVSDLAGYRVRSRDLDRL------TSADEKHASNSHIARTRQDSEGGDIA----HAWRYPLVARGPGDAMSXXXXXXXXXXXXXGGEGFITGVYFPLLSVLMPRWLKQLAEN----GNCNAAKMILLVSGVGKPRSQEHRVEDNSTEVTAVLMEAYLKRHYPDVRVVRLHSNTNIFRYDDNIRFVKTELLPFLETERSRTAERYGSAWQDMMHVTMSFADGSPARISSIKAALRPFRPSFIHIWELKTFWHEKIICEDDVEVHTFDEIDMLPPIPAPEVDPSTALVIAEMLRLKED----WERVLAAPSPPQRAIAGRDATNDLASFWLRKTKKPVLAVLLVQKKGCQPKLYRGTNMEVSMPTGSLCAERNVIGSALSDEFSLLRREIKAVAVLSLPRLDKISSSNKITASAVLSSAAVAPTAGDGENYKDCLNAAAILLTRGGGGRSLVGLTPAAISESESSMQSRNVSPFEVTPTLTTSPTWPRRLGGERVSRGAAGTLGRHGTISFWDSRDEDCREGGGGDVQGVAAADKKRLEGVPQVKCALHHVTTHDRFVILPSRRPLCLMNIDTIPLVIPRNSTEFACQELFAAEPEDRASKRATTEASPHPAEALESPSDGQQRQKTRGRETRTEEEDHGAIVGPRSTNPRFRSKSCEPLVSRAKSKQALEGGGDGESGRSEGVPARQIHSNVVARVPAKTPCSNPLKPCGACMEWLKKIAEVNPDFKVITFTDSFCSGVYIENVA 3637
RR+ELL+HNVSHKD+ LSL R + + V+ G T R +A+ D L RPKFS F+ S+ ILQ + S P VY R +++PS P+A + + D + G +R +L VGFDL P+PV DL +R+R DL +L H S ++ GG A R PL R + + I GVYFPLL+ ++P W K +A G K+I LVSGVG PR E NST+ TA L+E +++R+YPDVRVVR+HS TNIFRYD+NI FVK ELLP +E R AER+G++W+ +T+SFADGSPARIS+I AALRP+RPSF+H WELKTFWH +C +DVEV F++ID PP+P D LV EMLR KE+ + + L A DL++FWLRKT+KPVLAVLLVQK +P LYRG NMEVSMPTGSLCAERN IGSAL+ + +L RR++K VAVLS+ K ++ G + A + + P S++ RN S + + PR L G R +G AG R G GD +G +R +V L + R I+ S ++ ++L + K P PAE RGR H + + S +P+ SKS P++ S ++GGG + G G ++ ++ + NPLKPCGACMEWLKKIAE NP+F+V TFTD C G+Y E V+
Sbjct: 139 RRIELLVHNVSHKDMVLSLATLPGLGPSRTPSEELLSRTSSTSSTVLRVGPLAPFTATHRRRTSSSAVMQEDLVLCRPKFSLFQPVSDAILQVVHHHICPSVKVP------VYVR-----------------------EHNPSAPAALPGPHSSSASSSDAPSLRRGDMRHERSYTLRRQSLTTQPELPVGFDLSECPLPVQDLTDFRLRRDDLGKLYPPLPSPRLQPPHPSPGGHDPAVTENAGGMAAAKNDSVDRDPLAGRSSPRSPAPLQDAVG-----------IDGVYFPLLANVLPTWRKTVAAGVGPGGEEEVFKIIFLVSGVGMPRDPTSSREGNSTQGTAALLEEWMQRNYPDVRVVRVHSTTNIFRYDENIAFVKNELLPLIEHYRDGAAERWGTSWRHKYRLTISFADGSPARISAINAALRPYRPSFMHTWELKTFWHHAKMCLEDVEVLAFEDIDTAPPVPLSHADARARLVAQEMLRYKEEVLLHYRQGLCA---------------DLSTFWLRKTEKPVLAVLLVQKDRARPLLYRGCNMEVSMPTGSLCAERNAIGSALAADLTLKRRDLKVVAVLSVS-FGKNGNTGXXX-----------XXXXXGRKPEGTAKALDAVFAS-------IDTAPRVASQTTD----RNHSYSDSCTGHSIGNAQPRGLLGPR--KGDAGASERTGGSMMASV----------GDQEGPWTPSSRRTGAQEEVFDGL----SPPRTTIIRS----------------------YSVKDLNGCGQDGAFGK-------PSPAEC-------------RGRP-------HASSMD--SLDPKS-SKSTSPII--PLSNLRVDGGGRDQQG--PGAMTIRVEADDL----------NPLKPCGACMEWLKKIAEKNPEFRVATFTDEACRGIYTEFVS 921
BLAST of mRNA_H-elongata_contig6483.14071.1 vs. uniprot
Match: A0A7R9UFD1_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UFD1_9STRA) HSP 1 Score: 335 bits (860), Expect = 2.680e-95 Identity = 303/927 (32.69%), Postives = 436/927 (47.03%), Query Frame = 2
Query: 953 GRRLELLLHNVSHKDLALSLRRTLYPAAVVGKGTGERYNAIDAPDTALARPKFSRFKASS----EIILQKLVEMRK-------SSGSEPPPAV--CAVYRRGEE---------PEQEREAELALGSAKDTGGVDNDPSNPSA-ADNRENHNCDDMDGTNAVNGKQREXXXXXXXXXXXRQLSVGFDLDTNPIPVSDLAGYRVRSRDLDRLTSADEKHASNSHIARTRQDSEGGDIAHAWRYPLVARGPGDAMSXXXXXXXXXXXXXGGEGFITGVYFPLLSVLMPRWLKQLAENG--------NCNAAKMILLVSGVGKPRSQEHRVEDNSTEVTAVLMEAYLKRHYPDVRVVRLHSNTNIFRYDDNIRFVKTELLPFLETERSRTAERYGSAWQDMMHVTMSFADGSPARISSIKAALRPFRPSFIHIWELKTFWHEKIICEDDVEVHTFDEIDMLPPIPAPEVDPSTAL-VIAEMLRLKEDWERVLAAPSPPQRAIAGRDATNDLASFWLRKTKKPVLAVLLVQKKGC-QPKLYRGTNMEVSMPTGSLCAERNVIGSALSDEFSLLRREIKAVAVLSLPRLDKISSSNKITASAVLSSAAVAPTAGDGENYKDCLNAAAILLTRGGGGRSLVGLTPAAISESESSMQSRNVSPFEVTPTLTTSPTWPRRLGGERVSRGAAGTLGRHGTISFWDSRDEDCREGGGGDVQGVAAADKKRLEGVPQVKCALHHVTTHDRFVILPSRRPLCLMNIDTIPLVIPRNSTEFACQELFAAEPEDRASKRATTEASPHPAEALESPSDGQQRQKTRGRETRTEEEDHGAIVGPRSTNPRFRSKSCEPLVSRAKSKQALEGGGDGESGRSEGVPARQIHSNVVARVPAKTPCSNPLKPCGACMEWLKKIAEVNPDFKVITFTDSFCSGVYIENV 3634
GR LE+L+HNVSHKD+ + + L K G +D P ALARPKFS + A S E I +L+ +K S GS+ P A+ RG++ PE R DPS PS +DN N + R++ G DL + P + + +D ++ D + A TR GGD+ ++ R P ++ S G I GV+FPLL+VL+P+W + + G + K+I+LVSGVG+PR+ E R EDNSTEV A+L +++R PDV+++RLHS TNI+RY +NI FVK ELLP L R A R+GS+W++ M VT+SFADGSPAR+++I AALRP++PSF+HIW+L+TFWH + IC DDVEV +F E+D P +P EVD V EM++ +ED+++ ++ + + +DL +FW+RK+ K VL+VLL +K G +P L+RGTNMEVSMPTGSLCAERNVIG+AL+ + +L R +++ +AVLS+ SS K A V + P + + L AA + G PA ++ P LT+S + P G ++ + +HG+ + + + +L V A+ +V R + LP L D+ R++ + E +E ASKR+ +E+ + +P QR+ T R + + A P + + G + R E V NPLKPCGACMEWL+KIAEVNP F V+TFTD C GVY E+V
Sbjct: 144 GRGLEVLVHNVSHKDMVVGICNYLRCRTTSSKPDG---GPVD-PTIALARPKFSLYYAVSKQIYEFIEDRLLRSQKRASHVGSSVGSDTPVTTKRSALDLRGKQLRPLKVLWFPESRR-----------------DPSLPSTFSDNASNES---------------------------RRIPGGLDLAASGDPKQAYSEHPRNGQDF--ISVPDPSGFKFRNDASTRAVL-GGDL------DILGRPPTESPS--------------GIFGIAGVFFPLLAVLLPKWRAFIRDRGAVQDLITGSAQTRKVIVLVSGVGEPRNPEDRKEDNSTEVAAMLASLFIQRLCPDVKIIRLHSKTNIYRYTENIGFVKFELLPLLAEFRDAQAARWGSSWREKMRVTVSFADGSPARVAAINAALRPYKPSFMHIWQLQTFWHARRICLDDVEVLSFAEVDTYPAVPTNEVDDDEMKWVCEEMVKFREDFDKAVSGDDNDSQG----QSKHDLGTFWMRKSGKVVLSVLLTRKGGGGKPLLHRGTNMEVSMPTGSLCAERNVIGTALAHDLTLKRNDLRIIAVLSVSL-----SSTKSPAQGV----SATPRDPNPPYLPNALAYAAPGFSLG---------APALDEDA---------------PVLTSSMSMPDLQGMVQLGEPTS-PPSKHGSAP----------------KEQPSPPTRSKLSLVNDSASAMENV----RSMKLPR-----LQREDS-----GRSARDDDVAENAGSECGSTASKRSRSES----VDLKRTP----QRRTTLRSLKRARDYQNLAASSPFALFTKM-----------------------GSAPRGESVVLTDASD------------LNPLKPCGACMEWLRKIAEVNPQFAVLTFTDRDCKGVYREHV 888
BLAST of mRNA_H-elongata_contig6483.14071.1 vs. uniprot
Match: A0A7S2WW95_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WW95_9STRA) HSP 1 Score: 314 bits (804), Expect = 3.500e-90 Identity = 228/667 (34.18%), Postives = 314/667 (47.08%), Query Frame = 2
Query: 1697 ITGVYFPLLSVLMPRWLKQLAENGNCNAAKMILLVSGVGKPRSQEHRVEDNSTEVTAVLMEAYLKRHYPDVRVVRLHSNTNIFRYDDNIRFVKTELLPFLETERSRTAERYGSAWQDMMHVTMSFADGSPARISSIKAALRPFRPSFIHIWELKTFWHEKIICEDDVEVHTFDEIDMLPPIPAPEVDPSTALVIAEMLRLKEDWERVLA------APSPPQRAIAGRDATN----------DLASFWLRKTKKPVLAVLLVQKKG-CQPKLYRGTNMEVSMPTGSLCAERNVIGSALSDEFSLLRREIKAVAVLSL--PRLDKISSSNKITASAVLSSAAVAPTAGDGENYKDCLNAAAILLTRGGGGRSLVGLTPAAISESESSMQSRNVSPFEVTPTLTTSPTWPRRLGGERVSRGAAGTLGRHGTISFWDSRDEDCREGGGGDVQGVAAADKKRLEGVPQVKCALHHVTTHDRFVILPSRRPLCLMNIDTIPLVIPRNSTEFACQELFAAEPEDRASKRATTEASPHPAEALESPSDGQQRQKTRGRETRTEEEDHGAIVGPRSTNPRFRSKSCEPLVSRAKSKQALEGGGDGESGRSEGVPARQIHSNVVARVPAKTPCSNPLKPCGACMEWLKKIAEVNPDFKVITFTDSFCSGVYIENVAQ 3640
I+GVYFPLL+ ++PRWL+ L E+ +A K++ LVSGVG PR + NSTE + L+E +L HYP + V R+HS+TN+FRYD+NI FVK ELLP +E R A + GSAW+D +T+SFA GSPARI++I++ALRP+RP F+H+W+LKTFWHE IC DD+E + ++++ LP +P + DP LV + LK+ ++ V+ A SP ++ +++ D+A FW RK++K VL+VLLV K+G QP+LY GTNMEVSMPTGSLCAERN IGSAL+ + SL R E+K + VL L P+ K + S S A+ P D D A+A L++ G F ++ D E+ + D+ + D+ L P+ K LPS L P RNST A RST R+ S +PL G G PA + ++ + NPLKPCGAC EWLKKIAEVNP F+++TFTD+ C+G YIE+V +
Sbjct: 102 ISGVYFPLLATIIPRWLQALRESRAQDAWKIVYLVSGVGVPRDESADPGQNSTEGVSELLEMWLLTHYPGITVRRVHSDTNLFRYDENIAFVKRELLPEIEPIRDALACKLGSAWRDNFKLTVSFASGSPARITAIQSALRPYRPMFMHMWQLKTFWHESTICLDDIEFMSSEDVETLPAVPTEQTDPHVQLVAQRIKELKQQFDAVVTGSGGAQASSPLRQFFPDTSSSDGPVLCSPVGHDMAKFWHRKSRKVVLSVLLVLKEGETQPRLYAGTNMEVSMPTGSLCAERNAIGSALAADLSLKRSELKLIGVLGLVLPKERKAEAVRPTKKSTRDSDTALLPIPLD-----DRAPASAPLVSSSSG--------------------------F---------------------------------SLYLADGEREEKKNALQVDIPDAKSGDQSTLSP-PRFKTLRSFERGDSANSGLPSELALPPTKASAFPYGNLRNSTSTGTLSQAA-----------------------------------------------------RSTE---RAGSSDPL------------------GSHPGTPAM-----LSRKLQVEMEDMNPLKPCGACSEWLKKIAEVNPAFRILTFTDANCTGTYIESVME 624
BLAST of mRNA_H-elongata_contig6483.14071.1 vs. uniprot
Match: A0A7S2ES86_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2ES86_9STRA) HSP 1 Score: 303 bits (777), Expect = 2.730e-85 Identity = 238/730 (32.60%), Postives = 354/730 (48.49%), Query Frame = 2
Query: 1694 FITGVYFPLLSVLMPRWLKQLAENGNC------NAAKMILLVSGVGKPRSQEHRVEDNSTEVTAVLMEAYLKRHYPDVRVVRLHSNTNIFRYDDNIRFVKTELLPFLETERSRTAER--------------------------------YGSAWQDMMHVTMSFADGSPARISSIKAALRPFRPSFIHIWELKTFWHEKIICEDDVEVHTFDEIDMLPPIPAPEVDPSTALVIAEMLRLKEDWERVLAAPSPPQRAIAGRDAT-NDLASFWLRKTKKPVLAVLLVQKK-----GC-QPKLYRGTNMEVSMPTGSLCAERNVIGSALSDEFSLLRREIKAVAVLSLPRLDKISSSNKITASAVLSSAAVAPTAGDGENYKDCLNAAAILLTRGGGGRSLVGLTPAAISESESSMQSRNVSPFEVTPTLTTSPTWPRRLGGERVSRGAAGTLGRHGTISFWDS-----------RDEDCREGG--------GGDVQGVAA------ADKKRLEGVPQVKCALHHVTTHDRFVILPSRRPLCLMNIDTIPLVIPRNSTEFACQELFAAE-------PEDRASKRATTEASPHPAEALESPSDGQQRQKTRGRETRT----EEEDHGAIVGPRS---TNPRFRSKSCEPLVSRAKSKQALEGGGDGESGRSEGVPARQIHSNVVARVPAKTPCSNPLKPCGACMEWLKKIAEVNPDFKVITFTDSFCSGVYIEN 3631
++ ++FPLL+ L+PRW Q+ E N K+++L SGVG PR+ H + NST+ A LME ++ YPDV VVR+HS+TNIFRYD+NI FVK EL+P ++ R A + W+ VT+SFADGSPAR +I+A+LRP++P++ H W+LKTFWHE IC+DD+EVH+F++++ +P + + + LV+ EM + L +I G + ND+ FWLRKTKKPVLAVLLV+K+ G +P LYRGTNMEVSMPTGSLCAERNVIG+AL+ + SL R ++K VAVL++P +S + + G + A+ + + GGG ++ P + +E + + EV L E+ + +G + R +++ + S R+E+ R+G GDV ++ D + Q++C + S NI T+P S +F+ + A+ P D + ++ A+ A A S + +Q G RT ++D G++V + RSK + S + G G G+ R+ V V + T NPL+PCGAC EWLKKIAEV+ DFKV+TFTD+ C+GVY+ +
Sbjct: 51 YLNAIFFPLLATLLPRWTNQIEEKYNSLSISSHQIKKIVILCSGVGTPRNWTHSITGNSTQALAELMEMFITALYPDVTVVRVHSDTNIFRYDENISFVKRELMPVIDAYRDAHARNEAYPDEKEEIQLLEDKEMVVXXXXXXXXXXNPFDPDWKKSFAVTLSFADGSPARTHAIQASLRPYKPTYFHFWQLKTFWHESKICDDDIEVHSFEDMETVPAMEVNQTNEKVQLVVEEMKNFHAHFLEALKEDEEEGLSIDGGGVSKNDIRQFWLRKTKKPVLAVLLVEKQYDVNGGVGKPILYRGTNMEVSMPTGSLCAERNVIGTALASDPSLKREDLKMVAVLAVP----LSPXXXXXXXXXXXNVPLCQPCGSSD-------ASTVEIRHGGGELAIPVAAPTSATEGHAFLT-------EVEQKL------------EQSRQQQSGNMRRSLSVTSFASIVECVNEDQEEREEEGRQGAVIIAEGSNTGDVDLSSSWVVNDGIDADPISDQQQIQCTQEEKEEGGESSLFSSLSS----NIITVP-----KSPKFSPLLTYGADYPSSVVPPLDLSQVPSSHVAAATAAAASISNASPKQP----GTPMRTIKLYTDDDAGSVVAEDDFLKMGKQVRSK----ITSDVYGISGTDAGKSGLIGKPPIGQGRRKQKRTVV-VHSSTEDLNPLRPCGACNEWLKKIAEVSIDFKVLTFTDADCNGVYVSS 732
BLAST of mRNA_H-elongata_contig6483.14071.1 vs. uniprot
Match: A0A3M6VVK1_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VVK1_9STRA) HSP 1 Score: 280 bits (716), Expect = 8.130e-78 Identity = 136/305 (44.59%), Postives = 207/305 (67.87%), Query Frame = 2
Query: 1697 ITGVYFPLLSVLMPRWLKQLAENGNCNAAKMILLVSGVGKPRSQEHRVEDNSTEVTAVLMEAYLKRHYPDVRVVRLHSNTNIFRYDDNIRFVKTELLPFLETERSRTAERYGSAWQDMMHVTMSFADGSPARISSIKAALRPFRPSFIHIWELKTFWHEKIICEDDVEVHTFDEIDMLPPIPAPEVDPSTALVIAEMLRLKEDWERVLAAPSPPQRAIAGRDATNDLASFWLRKTKKPVLAVLLVQKK----GCQPKLY--RGTNMEVSMPTGSLCAERNVIGSALSDEFSLLRREIKAVAVLSL 2593
IT VYFPL+++L+P+W++ L E + N+ +++ L+SG G PR+ EH DNSTE+TA L+ ++ ++YP + +++HS +NIFR+DDN++F+ EL P LE +R +R G AW+ HVT+++ADG PAR+S++ A+LR +RPS++HIW+LKTFWHE+ + DV+ H+F++I+ P + + D T +V+ EM ++ + + ++ASFWLRK++KPVLAVLL++K G +P + RG N EVSMPTGSLCAERN IGSAL+ + +L RR +K +AVL L
Sbjct: 165 ITAVYFPLVALLLPKWMQVLKEFQSENSRQLVYLISGAGIPRNVEHSRNDNSTEITAQLIALFVHQYYPHMTAIQVHSGSNIFRFDDNVQFMTRELRPLLEAQRETLVDRCGEAWKSHFHVTIAYADGPPARLSALNASLRIYRPSYLHIWQLKTFWHERKLSMVDVDFHSFEKIEASPLVAPSKADAMTQMVVREMRMFRDQF--------------LSAEGEGEVASFWLRKSRKPVLAVLLIEKPATVAGERPTIVVQRGMNCEVSMPTGSLCAERNAIGSALASDPTLTRRALKMIAVLGL 455
BLAST of mRNA_H-elongata_contig6483.14071.1 vs. uniprot
Match: A0A835Z834_9STRA (A distinct subfamily of CDD/CDA-like deaminases-domain-containing protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z834_9STRA) HSP 1 Score: 271 bits (694), Expect = 1.020e-77 Identity = 206/542 (38.01%), Postives = 255/542 (47.05%), Query Frame = 2
Query: 2027 YGSAWQDMMHVTMSFADGSPARISSIKAALRPFRPS--FIHIWELKTFWHEKIICEDDVEVHTFDEIDMLPPIPAPEVDPSTALVIAEMLRLKEDWERVLAAPSPPQRAIAGRDATNDLASFWLRKTKKPVLAVLLVQKKGCQPKLYRGTNMEVSMPTGSLCAERNVIGSALSDEFSLLRREIKAVAVLSLPRLDKISSSNKITASAVLSSAAVAPTAGDGENYKDCLNAAAILLTRGGGGRSLVGLTPAAISESESSMQSRNVSPFEVTPTLTTSPTWPRRLGGERVSRGAAGTLGRHGTISFWDSRDEDCREGGGGDVQGVAAADKKRLEGVPQVKCALHHVTTHDRFVILPSRRPLCLMNIDTIPLVIPRNSTE--FACQELFAAEPEDRASKRATTEASPHPAEALESPSDGQQRQKTRGRETRTEEEDHGAIVGPRSTNPRFRSKSCEPLVSRAKSKQALEGGGDGESGRSEGVPARQIHSNVVARVPAKTPCSNPLKPCGACMEWLKKIAEVNPDFKVITFTDSFCSGVYIENVAQ 3640
YGS W+DMMH+T+SFADGSPARISSI A+LR +RP ++HIWELKTFWHE ICEDDVE HTF++I+ P P E P A V+AEMLRL++ + ++ RDA NDLA FWLRKTKKPVLAVLLVQK G +PK+YRGTNMEVSMPTGSLCAERNVIG+AL+D+ SL RR+++ VAVL+ +T +A L A + DC LT+ G S+ TP A SP P AAG + + S + D G ++R E P+ R T CQE +R S A H + P P R SC+ ++ R A RS+ V R +H V +V A+ NPLKPCGAC EWL+KIAEVNPDFKV+TFTD+ C GVYIE+V
Sbjct: 2 YGSDWRDMMHLTISFADGSPARISSINASLRHYRPRQVYMHIWELKTFWHEGRICEDDVEAHTFEDIETAPATPPAEAGPLVAQVVAEMLRLRDAF------------SVRLRDAFNDLAQFWLRKTKKPVLAVLLVQKPGQEPKVYRGTNMEVSMPTGSLCAERNVIGTALADDLSLCRRDLRMVAVLA------------VTLAAPLPPATPQAQTPALQMPPDCFGR----LTKAGS--SVFNDTPCA------------------------SPLLP-----------AAGAFSSYRSESAGSQAEAQAFSSA--DATGFYMRARRRSESWPE------------------------------------RGETNGVLVCQE-------ERLSAAA-----------------------------------HQHVHAP----PLTRIGSCDSII-RTTDASAPNTPTHKPGHRSQLV--RSLHKGSVQKVQAQHAAVNPLKPCGACTEWLRKIAEVNPDFKVLTFTDTTCEGVYIESVTS 391
BLAST of mRNA_H-elongata_contig6483.14071.1 vs. uniprot
Match: A0A448YX44_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YX44_9STRA) HSP 1 Score: 284 bits (727), Expect = 2.160e-77 Identity = 205/604 (33.94%), Postives = 303/604 (50.17%), Query Frame = 2
Query: 956 RRLELLLHNVSHKDLALSLRRTLYPAAVVGKGTGERYNAIDAPDT-ALARPKFSRFKASSEIILQKLVEMRKSSGSEPPPAVCAV--YRRGEEPEQEREAELALGSAKDTGGVDNDPSNPSAADNRENHNCDDMDGTNAVNGKQREXXXXXXXXXXXRQLSVGFDLDTN-------PIPVS--DLAGYRVRSRDLDRLTSADEKHASNSHIARTRQDSEGGDIAHAWRYPLVARGPGDAMSXXXXXXXXXXXXXGGEGFITGVYFPLLSVLMPRWLKQLAENGNCNAA---------KMILLVSGVGKPRSQEHRVEDNSTEVTAVLMEAYLKRHYPDVRVVRLHSNTNIFRYDDNIRFVKTELLPFLETER----------------SRTAER-------YGSAWQDMMHVTMSFADGSPARISSIKAALRPFRPSFIHIWELKTFWHEKIICEDDVEVHTFDEIDMLPPIPAPEVDPSTAL--VIAEMLRLKEDWERVLAAPSPPQRAIAGRDATNDLASFWLRKTKKPVLAVLLVQKKGCQPKLYRGTNMEVSMPTGSLCAERNVIGSALSDEFSLLRREIKAVAVLSLPRLDKISSSNKI 2629
R ELL+HNVSH DL LSL P++ G A+D D L RP+FS F A S+ ++ L R+ E AV + Y R ++ +Q + PS+ + R++ + +GF L+ + P+ VS +L RVR RD R+ + + NS + I V+FPLL+ LMP W ++ + N +A ++++LVSGVG+PR+ H + NSTE A LM+ +LK +P++ V+ +HS+TNIFRYD+NI FV ELLP ++ R S TA+ + + W+ +T+S+ADGSPAR S+I+AALR F+P++ H W+LKTFWHE I DVEVH+F+EI+ LPP+ + ++ + + V+ EM ++D+ ++L+ S D +ND+ +FWLRKT KPV+A+L VQ + KLYRGTNMEVSMPTGSLCAERNVIG+AL+D SL R+++K VAVL++P ++ +S +
Sbjct: 218 RYAELLVHNVSHTDLVLSLDAPRLPSSTTGF-------AMDGNDPYCLCRPRFSAFDAYSQRLVDFLQGCRQRELEE---AVIHLPRYERNDKTQQPQ---------------------PSSENFRDD-------------------------------IPIGFRLNDDRNDKSHRPLRVSPSELHNLRVRGRDASRVDACSSPMSPNSTLN-----------------------------------------------INAVFFPLLATLMPLWEDRIHQKYNFPSATTQSALKPKQVLILVSGVGQPRNWTHSAKGNSTEQCAELMKMFLKVIFPELVVLHIHSDTNIFRYDENIAFVNQELLPRVQEYRDAHAKGLPYPDEIINLSSTAKDSIDQDRPFSTEWRKSFSITISYADGSPARNSAIQAALRTFKPTYYHFWQLKTFWHESKIVNSDVEVHSFEEIETLPPVESNQLQDGSLVKRVVEEMKNFRDDFLKILSNSS---------DDSNDIRAFWLRKTHKPVIAILAVQPPNGELKLYRGTNMEVSMPTGSLCAERNVIGTALADNPSLRRQDLKMVAVLAVPNPKQLQASTSV 703
BLAST of mRNA_H-elongata_contig6483.14071.1 vs. uniprot
Match: A0A7S4EMT4_9STRA (Hypothetical protein n=2 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4EMT4_9STRA) HSP 1 Score: 282 bits (721), Expect = 3.920e-76 Identity = 195/582 (33.51%), Postives = 294/582 (50.52%), Query Frame = 2
Query: 956 RRLELLLHNVSHKDLALSLRRTLYPAAVVGKGTGERYNAIDAPDT-ALARPKFSRFKASSEIILQKLVEMRKSSGSEPPPAVCAVYRRGEEPEQEREAELALGSAKDTGGVDNDPSNPSAADNRENHNCDDMDGTNAVNGKQREXXXXXXXXXXXRQLSVGFDLDTNPIPVSDLAGYRVRSRDLDRLTSADEKHASNSHIARTRQDSEGGDIAHAWRYPLVARGPGDAMSXXXXXXXXXXXXXGGEGFITGVYFPLLSVLMPRWLKQLAENGNCNAA--------KMILLVSGVGKPRSQEHRVEDNSTEVTAVLMEAYLKRHYPDVRVVRLHSNTNIFRYDDNIRFVKTELLPFLETERSRTAER------------------------YGSAWQDMMHVTMSFADGSPARISSIKAALRPFRPSFIHIWELKTFWHEKIICEDDVEVHTFDEIDMLPPIPAPEVDPSTAL--VIAEMLRLKEDWERVLAAPSPPQRAIAGRDATNDLASFWLRKTKKPVLAVLLVQKKGCQPKLYRGTNMEVSMPTGSLCAERNVIGSALSDEFSLLRREIKAVAVLSLP 2596
R +ELL+HNVSH DL LSL P++ T + D L RP+FS F A S+ ++ L E ++ E Y R +E +Q + + S K G + + N D ++ + + R L +P + DL R+R RD+ R+ E H+S S + + + I V+FPLL+ LMP W ++ E ++ ++++LVSGVG+PR+ H V+ NST+ A LM+ +LK +P++ V+ +HS+TNIFRYD+NI FVK ELLP ++ R A+ + W+ +T+S+ADGSPAR S+I+AALR F+P++ H W+LKTFWHE I D+EVH+F+E++ LPP+ + + + + V+ EM ++ + ++L+ S + +ND+ +FWLRKT KPV+A+L VQ + KLYRGTNMEVSMPTGSLCAERNVIG+AL+D SL R+++K +AVL++P
Sbjct: 262 RYVELLVHNVSHTDLVLSLDAPRLPSSSDTNSTSPASTDGNGNDPYCLCRPRFSAFDAYSQRLVDFLKEQQQKKLREEAVINLPRYERNDETQQPQPS-----SEKIRGDIP-------VGFRLQEENGKHSDRSDKSSSRHR--------------------LGVSPSELHDL---RIRGRDVSRV----EAHSSTSLSSNSLMN------------------------------------------INAVFFPLLATLMPLWEDRIIEKYGSSSTTISSPIPKQVLILVSGVGQPRNWTHSVKGNSTQQCAELMKIFLKTIFPNLVVLHIHSDTNIFRYDENIAFVKQELLPRVQEYRDAHAKALPYPDEIANLPSGIINNTIDNDRPFSPEWRKSFSITISYADGSPARNSAIQAALRTFKPTYYHFWQLKTFWHESKIVNSDIEVHSFEEMETLPPVESNRLQDRSLVKQVVEEMKTFRDKFTQILSNTS---------EDSNDIRAFWLRKTHKPVIAILAVQPPNGKVKLYRGTNMEVSMPTGSLCAERNVIGTALADNPSLRRQDLKMIAVLAVP 753 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig6483.14071.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig6483.14071.1 >prot_H-elongata_contig6483.14071.1 ID=prot_H-elongata_contig6483.14071.1|Name=mRNA_H-elongata_contig6483.14071.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=1136bp MSLHLPESVALLALSITTLAVVLVGIERSRARRPGDSRSGLSNDTFASAIback to top mRNA from alignment at H-elongata_contig6483:1087..9520+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig6483.14071.1 ID=mRNA_H-elongata_contig6483.14071.1|Name=mRNA_H-elongata_contig6483.14071.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=8434bp|location=Sequence derived from alignment at H-elongata_contig6483:1087..9520+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig6483:1087..9520+ >mRNA_H-elongata_contig6483.14071.1 ID=mRNA_H-elongata_contig6483.14071.1|Name=mRNA_H-elongata_contig6483.14071.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=6816bp|location=Sequence derived from alignment at H-elongata_contig6483:1087..9520+ (Himanthalia elongata Himel1 dioecious)back to top |