mRNA_H-elongata_contig63845.13961.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig63845.13961.1 vs. uniprot
Match: A0A6H5KUV2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUV2_9PHAE) HSP 1 Score: 119 bits (297), Expect = 5.410e-31 Identity = 54/70 (77.14%), Postives = 62/70 (88.57%), Query Frame = 1
Query: 22 VTCKPAKLEIPAHGKAEMKVEYVPGRINWNYRKTVTVVNCLNPHGNVDVEITGSNIDTHHVLYHSHFYKV 231
V+CKPA+L+IPAHGKAEMKVEYVP +IN+ YRKT+TV+N NPHG+ DVEI SN DTHHVLYHSHFYKV
Sbjct: 138 VSCKPARLDIPAHGKAEMKVEYVPRKINYKYRKTLTVMNAHNPHGHADVEIAASNTDTHHVLYHSHFYKV 207
BLAST of mRNA_H-elongata_contig63845.13961.1 vs. uniprot
Match: D8LHH6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHH6_ECTSI) HSP 1 Score: 119 bits (298), Expect = 1.450e-29 Identity = 55/72 (76.39%), Postives = 62/72 (86.11%), Query Frame = 1
Query: 16 KVVTCKPAKLEIPAHGKAEMKVEYVPGRINWNYRKTVTVVNCLNPHGNVDVEITGSNIDTHHVLYHSHFYKV 231
K V+CKPA+L+IPAHG AEMKVEYVP +IN+ YRKTVTV+N NPHG+ DVEI SN DTHHVLYHSHFYKV
Sbjct: 938 KAVSCKPARLDIPAHGTAEMKVEYVPRKINYKYRKTVTVMNAHNPHGHADVEIAASNTDTHHVLYHSHFYKV 1009
BLAST of mRNA_H-elongata_contig63845.13961.1 vs. uniprot
Match: A0A835YT04_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YT04_9STRA) HSP 1 Score: 94.4 bits (233), Expect = 8.760e-21 Identity = 40/72 (55.56%), Postives = 54/72 (75.00%), Query Frame = 1
Query: 16 KVVTCKPAKLEIPAHGKAEMKVEYVPGRINWNYRKTVTVVNCLNPHGNVDVEITGSNIDTHHVLYHSHFYKV 231
K V+C P L IP G A++K+EYVP +IN +YRKT+T++NC N G ++EI +N+DTHH+LYHS FYKV
Sbjct: 2122 KAVSCTPTNLSIPPRGSADLKIEYVPRKINSHYRKTITLINCFNARGTREIEIRAANMDTHHILYHSAFYKV 2193
BLAST of mRNA_H-elongata_contig63845.13961.1 vs. uniprot
Match: A0A1V9YDG1_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YDG1_9STRA) HSP 1 Score: 58.5 bits (140), Expect = 3.470e-8 Identity = 29/73 (39.73%), Postives = 45/73 (61.64%), Query Frame = 1
Query: 16 KVVTCKPA-KLEIPAHGKAEMKVEYVPGRINWNYRKTVTVVNCLNPHGNVDVEITGSNIDTHHVLYHSHFYKV 231
KVV+ P ++++ EMK+E +P ++N NY + ++VVN N V + SN+D HHV+YHS FYK+
Sbjct: 734 KVVSTVPNDEMQLGPKQSVEMKIEIIPRKVNANYTRVISVVNLKNKLNQAQVCVRSSNMDAHHVIYHSLFYKL 806
BLAST of mRNA_H-elongata_contig63845.13961.1 vs. uniprot
Match: A0A6G0WUD1_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WUD1_9STRA) HSP 1 Score: 57.4 bits (137), Expect = 8.880e-8 Identity = 25/54 (46.30%), Postives = 37/54 (68.52%), Query Frame = 1
Query: 70 EMKVEYVPGRINWNYRKTVTVVNCLNPHGNVDVEITGSNIDTHHVLYHSHFYKV 231
E+++E +P +IN NY + V+V+N N N V + SN+D HHV+YHS FYK+
Sbjct: 823 ELRIEIIPRKINPNYSRIVSVLNLKNKTNNAQVCVRSSNMDAHHVIYHSLFYKL 876
BLAST of mRNA_H-elongata_contig63845.13961.1 vs. uniprot
Match: A0A485LAB2_9STRA (Aste57867_18395 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LAB2_9STRA) HSP 1 Score: 55.5 bits (132), Expect = 4.240e-7 Identity = 25/54 (46.30%), Postives = 36/54 (66.67%), Query Frame = 1
Query: 70 EMKVEYVPGRINWNYRKTVTVVNCLNPHGNVDVEITGSNIDTHHVLYHSHFYKV 231
E+K+E +P +IN NY + VTV+N N V + SN+D HHV+YHS FY++
Sbjct: 818 EVKIEIIPRKINPNYSRVVTVLNLKNKTNVAQVCVRSSNMDAHHVIYHSLFYRL 871
BLAST of mRNA_H-elongata_contig63845.13961.1 vs. uniprot
Match: A0A067C9G9_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067C9G9_SAPPC) HSP 1 Score: 55.1 bits (131), Expect = 5.800e-7 Identity = 24/54 (44.44%), Postives = 34/54 (62.96%), Query Frame = 1
Query: 70 EMKVEYVPGRINWNYRKTVTVVNCLNPHGNVDVEITGSNIDTHHVLYHSHFYKV 231
EMK+E +P ++N NY + + VN N V + SN+D HHV+YHS FYK+
Sbjct: 752 EMKIEIIPRKVNANYTRVINAVNLKNKLNLAQVCVRSSNMDAHHVIYHSLFYKL 805
BLAST of mRNA_H-elongata_contig63845.13961.1 vs. uniprot
Match: A0A397BD28_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397BD28_9STRA) HSP 1 Score: 53.9 bits (128), Expect = 1.460e-6 Identity = 25/54 (46.30%), Postives = 35/54 (64.81%), Query Frame = 1
Query: 70 EMKVEYVPGRINWNYRKTVTVVNCLNPHGNVDVEITGSNIDTHHVLYHSHFYKV 231
E+K+E +P + N NY + V+VVN N V + SN+D HHV+YHS FYK+
Sbjct: 836 ELKIEIIPRKTNPNYSRVVSVVNLNNKANVATVCVRSSNMDAHHVIYHSLFYKL 889
BLAST of mRNA_H-elongata_contig63845.13961.1 vs. uniprot
Match: A0A024U7H7_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U7H7_9STRA) HSP 1 Score: 53.9 bits (128), Expect = 1.480e-6 Identity = 25/54 (46.30%), Postives = 35/54 (64.81%), Query Frame = 1
Query: 70 EMKVEYVPGRINWNYRKTVTVVNCLNPHGNVDVEITGSNIDTHHVLYHSHFYKV 231
E+K+E +P + N NY + V+VVN N V + SN+D HHV+YHS FYK+
Sbjct: 832 ELKIEIIPRKTNPNYSRIVSVVNLKNKANVATVCVRSSNMDAHHVIYHSLFYKL 885
BLAST of mRNA_H-elongata_contig63845.13961.1 vs. uniprot
Match: A0A2D4BVL3_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BVL3_PYTIN) HSP 1 Score: 53.5 bits (127), Expect = 2.020e-6 Identity = 23/54 (42.59%), Postives = 36/54 (66.67%), Query Frame = 1
Query: 70 EMKVEYVPGRINWNYRKTVTVVNCLNPHGNVDVEITGSNIDTHHVLYHSHFYKV 231
E+K+E +P +IN NY + ++++N N V + SN+D HHV+YHS FYK+
Sbjct: 185 ELKIEIIPRKINPNYSRLISIMNMKNKANIPQVCVRSSNMDAHHVIYHSLFYKL 238 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig63845.13961.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig63845.13961.1 >prot_H-elongata_contig63845.13961.1 ID=prot_H-elongata_contig63845.13961.1|Name=mRNA_H-elongata_contig63845.13961.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=78bp MSDPEKVVTCKPAKLEIPAHGKAEMKVEYVPGRINWNYRKTVTVVNCLNPback to top mRNA from alignment at H-elongata_contig63845:2525..2758- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig63845.13961.1 ID=mRNA_H-elongata_contig63845.13961.1|Name=mRNA_H-elongata_contig63845.13961.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=234bp|location=Sequence derived from alignment at H-elongata_contig63845:2525..2758- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig63845:2525..2758- >mRNA_H-elongata_contig63845.13961.1 ID=mRNA_H-elongata_contig63845.13961.1|Name=mRNA_H-elongata_contig63845.13961.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=468bp|location=Sequence derived from alignment at H-elongata_contig63845:2525..2758- (Himanthalia elongata Himel1 dioecious)back to top |