mRNA_H-elongata_contig63783.13950.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig63783.13950.1
Unique NamemRNA_H-elongata_contig63783.13950.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig63783.13950.1 vs. uniprot
Match: A0A6H5KPV9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KPV9_9PHAE)

HSP 1 Score: 536 bits (1380), Expect = 7.180e-188
Identity = 246/293 (83.96%), Postives = 265/293 (90.44%), Query Frame = 1
Query:   10 AKVTPNGGMVWDGNGWIALVDDDSDHAPPSPKTESWKRADTTLFVGVSSFRDKRCPQTLVNYFTKARNPERLTVAIVQQNDHEDVDCVAEYCRMRG-QKEGPLCPFFDNIKTLRVEAKHAAGPCYGRHLQASSYMLRDEEFCMQTDSHMDVVQDWDAKLLEMWGRVNNEYGVLTTYVHRIEQLKEGMENKKEVPHLCQVSFTDNFDHPRYVQAKLATKLPRPKLTNTWAAGLSVAKCHAWKATPYDPGLRKVFDGEEFSMHARLWTRGYDTYTPDKSLVGHDYNKVTNGPAPS 885
            AKVTPNG MVWDGNGWIAL DDD    PP PKT SWKR+DT++FVGVSSFRDKRCPQTLVN+F+KA+ PER+TV +VQQNDHEDVDCV EYC+M G   EGPLCP+FDNIKTLRVEA+ AAGPCYGRHLQ  SYMLRDEEFCMQTDSHMDVVQDWDAKL+ MWGRVNNEYG+LTTYVH+IEQL EG ENKKEVPHLCQ+ FT+  +HPRYVQAKLATKLP PKLTNTWAAGLS+AKCHAWKA+PYDPGLRKVFDGEEFSMHARLWTRGYDTYTPDKSLVGHDYNKV  GP PS
Sbjct:   38 AKVTPNGAMVWDGNGWIALWDDDEAPRPPPPKTTSWKRSDTSIFVGVSSFRDKRCPQTLVNFFSKAKYPERITVGVVQQNDHEDVDCVVEYCKMMGGHAEGPLCPYFDNIKTLRVEARWAAGPCYGRHLQ--SYMLRDEEFCMQTDSHMDVVQDWDAKLMAMWGRVNNEYGILTTYVHKIEQLHEGYENKKEVPHLCQLGFTETGNHPRYVQAKLATKLPSPKLTNTWAAGLSLAKCHAWKASPYDPGLRKVFDGEEFSMHARLWTRGYDTYTPDKSLVGHDYNKVKEGPQPS 328          
BLAST of mRNA_H-elongata_contig63783.13950.1 vs. uniprot
Match: A0A835ZER6_9STRA (GlcNAc-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZER6_9STRA)

HSP 1 Score: 389 bits (1000), Expect = 8.140e-131
Identity = 190/299 (63.55%), Postives = 221/299 (73.91%), Query Frame = 1
Query:   16 VTPNGGMVWDGNGWIALVDDDSDHAPPSPKTESWKRADTTLFVGVSSFRDKRCPQTLVNYFTKARNPERLTVAIVQQND-HEDVDCVAEYCRMRGQKE------GPLCPFFDNIKTLRVEAKHAAGPCYGRHLQASSYMLRDEEFCMQTDSHMDVVQDWDAKLLEMWGRVNNEYGVLTTYVH---RIEQLKEGMENKKEVPHLCQVSFTDNFDHPRYVQAKLATKLPRPKLTNTWAAGLSVAKCHAWKATPYDPGLRKVFDGEEFSMHARLWTRGYDTYTPDKSLVGHDYNKVTNGPAP 882
            + P G  VWDGNGW ALVDDDS   P  P +ES+K  + T+F+GVS+FRDKRCP+TL NYF+KA+NP RL V +VQQN   ED DC+  YC +    E      G  CP+ + IK  RVEAK AAGPCYGRH+Q  SYMLRDEEFCMQTDSHMDVV +WD ++  MWGR  NEYGVLTTYVH    I  L++  +  K VPHLCQVSFT   ++PRYVQAKLA    RPKLT +WAAG S AKCHAW+A PYDP L+ VFDGEEFSM ARLWTRGYD YTPD SL+GHDYN+ T+GP+P
Sbjct:    2 LVPTGAKVWDGNGWNALVDDDSLPKPHPPHSESYKDPNATIFIGVSAFRDKRCPKTLYNYFSKAKNPHRLRVGLVQQNSISEDPDCLQGYCDLMKADEKFATKFGDKCPYKEQIKITRVEAKLAAGPCYGRHMQ--SYMLRDEEFCMQTDSHMDVVPEWDEEMAAMWGRTENEYGVLTTYVHVKESIGTLEQAKDRNKLVPHLCQVSFTGG-NNPRYVQAKLAKLNGRPKLTTSWAAGFSFAKCHAWRAAPYDPHLKMVFDGEEFSMAARLWTRGYDFYTPDFSLIGHDYNRPTDGPSP 297          
BLAST of mRNA_H-elongata_contig63783.13950.1 vs. uniprot
Match: A0A7S3YLX0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YLX0_HETAK)

HSP 1 Score: 302 bits (774), Expect = 5.640e-96
Identity = 147/296 (49.66%), Postives = 192/296 (64.86%), Query Frame = 1
Query:   34 MVWDGNGWIALVDDDSDHAPPSPKTESWKRADTTLFVGVSSFRDKRCPQTLVNYFTKARNPERLTVAIVQQNDH-EDVDCVAEYCRMRG-----------QKEGPLCPFFDNIKTLRVEAKHAAGPCYGRHLQASSYMLRDEEFCMQTDSHMDVVQDWDAKLLEMWGRVNNEYGVLTTYVHRIEQLKEG--MENKKEVPHLCQVSFTDNFDH------PRYVQAKLATKLPRPKLTNTWAAGLSVAKCHAWKATPYDPGLRKVFDGEEFSMHARLWTRGYDTYTPDKSLVGHDYNK 861
            M +DG GWI L+++     P  PK++SWK+ +TT+FVG+++FRD RCP+TL N FTKA+NP+R+ V +VQQ D  +D DC+ +YC + G           ++    CP F+ ++  RV    A GP +GRHLQ  SY+LRDEEFCMQTDSHMD +  WD ++L  WG  +NEY VL TYV+R E L+ G  +  + +VPH+CQ+ +            PR  +AK A  L RPKLT  WAAG S  KCH  K TP DP L  +FDGEE+S  ARLWTRGYD YTP K+L+ HDYNK
Sbjct:    1 MAYDGIGWIPLIEEPRPPLPYPPKSDSWKQDNTTIFVGIAAFRDSRCPKTLFNMFTKAKNPDRVFVGLVQQWDETKDTDCIEKYCELMGAAVAGQDQAADRRRAQACPHFEQVRIHRVSHLLARGPTFGRHLQ--SYLLRDEEFCMQTDSHMDYIDHWDQEVLAAWGAAHNEYAVLATYVNRFEDLESGRALHPRFQVPHICQLEYVGGAYMGAKGMLPRNKRAKGAINLTRPKLTPFWAAGFSFLKCHGEKQTPNDPQLPGIFDGEEYSKGARLWTRGYDIYTPHKALIFHDYNK 294          
BLAST of mRNA_H-elongata_contig63783.13950.1 vs. uniprot
Match: A0A836CB83_9STRA (GlcNAc-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CB83_9STRA)

HSP 1 Score: 295 bits (755), Expect = 6.450e-94
Identity = 137/272 (50.37%), Postives = 183/272 (67.28%), Query Frame = 1
Query:   55 WIALVDDDSDHAPPSPKTESWKRADTTLFVGVSSFRDKRCPQTLVNYFTKARNPERLTVAIVQQNDHEDVDCVAEYCRMRGQKEGPLCPFFDNIKTLRVEAKHAAGPCYGRHLQASSYMLRDEEFCMQTDSHMDVVQDWDAKLLEMWGRVNNEYGVLTTYVHRIEQLKEGMENKKEVPHLCQVSFTDNFDHPRYVQAKLATKLPRPKLTNTWAAGLSVAKCHAWKATPYDPGLRKVFDGEEFSMHARLWTRGYDTYTPDKSLVGHDYNKVTN 870
            W+A+  D     P  P T+SW  A+ TL+VG++S+RD RC +TL N FTKA++PER+ VA+VQQ    D DC+ +YC + G+     CPF  N++ LR +A  AAGP +GRHLQ   Y+LRDEEFC+Q DSHMD++QDW+A L+  W ++NNE+ VL+TYV  +E L   +    E  HLC++ + +     R   AK    + +PKLT TWAAGLS +KCH+ +A PYDP L +VFDGEEFS  ARL+T GYD YTP K+ +GHDYN   N
Sbjct:   19 WVAVHRDLDGPQPFPPPTDSWSTAEATLWVGIASYRDPRCGKTLHNMFTKAKHPERVHVAVVQQMVEGDADCMDDYCALAGKDANGECPFAKNVRVLRTDAAEAAGPTWGRHLQ--QYLLRDEEFCLQIDSHMDMIQDWEAGLMAEWAQINNEHAVLSTYVQDVEDLGVNVGGHFETSHLCEILWEEQV---RNEGAKALRLMTQPKLTTTWAAGLSFSKCHSMRAVPYDPYLPQVFDGEEFSYFARLFTNGYDVYTPTKTYIGHDYNGANN 285          
BLAST of mRNA_H-elongata_contig63783.13950.1 vs. uniprot
Match: D7FQK5_ECTSI ([Skp1-protein]-hydroxyproline N-acetylglucosaminyltransferase, family GT60 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQK5_ECTSI)

HSP 1 Score: 291 bits (746), Expect = 3.430e-93
Identity = 139/269 (51.67%), Postives = 176/269 (65.43%), Query Frame = 1
Query:   55 WIALVDDDSDHAPPSPKTESWKRADTTLFVGVSSFRDKRCPQTLVNYFTKARNPERLTVAIVQQNDHEDVDCVAEYCRMRGQKEGPL-CPFFDNIKTLRVEAKHAAGPCYGRHLQASSYMLRDEEFCMQTDSHMDVVQDWDAKLLEMWGRVNNEYGVLTTYVHRIEQLKEGMENKKEVPHLCQVSFTDNFDHPRYVQAKLATKLPRPKLTNTWAAGLSVAKCHAWKATPYDPGLRKVFDGEEFSMHARLWTRGYDTYTPDKSLVGHDYN 858
            WI +    +   P  P+T+SW   DTTL+ G++SFRD +C +TL N F+KA  PERLT  +VQQN  +D  C+A YCR+ G+K+G   CPF DNI+ L + A  A GPC+ RHLQ  SY+L DEEFCMQ DSHMD V+ WD  ++E W   NNEYGVL+TYV     L   +  K EV HLC+V F+ +   PR  QA    ++  PKLT TW AG S +KCHA +  PYDP L ++FDGEEFS  ARLWT GYD YTP +  + HDY+
Sbjct:   96 WIPITRSSTAPQPYPPETDSWSYTDTTLWTGIASFRDPQCGETLFNLFSKASYPERLTAGVVQQNLEDDEGCLATYCRLMGEKDGKKDCPFRDNIRVLEMHASEAQGPCWARHLQ--SYLLADEEFCMQVDSHMDFVEGWDMAMMEEWAATNNEYGVLSTYVQDSRVLGVNVSKKWEVAHLCEVYFSPS-QQPRNQQA--IHEMTEPKLTTTWGAGYSFSKCHAERRVPYDPNLDRIFDGEEFSKMARLWTNGYDVYTPRRGHLVHDYS 359          
BLAST of mRNA_H-elongata_contig63783.13950.1 vs. uniprot
Match: A0A6H5L6U7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6U7_9PHAE)

HSP 1 Score: 294 bits (752), Expect = 4.250e-92
Identity = 138/269 (51.30%), Postives = 176/269 (65.43%), Query Frame = 1
Query:   55 WIALVDDDSDHAPPSPKTESWKRADTTLFVGVSSFRDKRCPQTLVNYFTKARNPERLTVAIVQQNDHEDVDCVAEYCRMRGQKEGPL-CPFFDNIKTLRVEAKHAAGPCYGRHLQASSYMLRDEEFCMQTDSHMDVVQDWDAKLLEMWGRVNNEYGVLTTYVHRIEQLKEGMENKKEVPHLCQVSFTDNFDHPRYVQAKLATKLPRPKLTNTWAAGLSVAKCHAWKATPYDPGLRKVFDGEEFSMHARLWTRGYDTYTPDKSLVGHDYN 858
            WI +    +   P  P+T+SW   DTTL+ G++SFRD +C +TL N F+KA  PERLT  +VQQN  +D  C+A YCR+ G K+G   CPF +NI+ L + A  A GPC+ RHLQ  SY+L DEEFCMQ DSHMD V+ WD  ++E W   NNEYGVL+TYV     L   +  K EV HLC+V F+ +   PR  QA+   ++  PKLT TW AG S +KCHA +  PYDP L ++FDGEEFS  ARLWT GYD YTP +  + HDY+
Sbjct:   54 WIPITRSSTAPQPYPPETDSWSYTDTTLWTGIASFRDPQCGETLFNLFSKASYPERLTAGVVQQNLEDDEGCLATYCRLMGVKDGAKDCPFRENIRVLEMHASEAQGPCWARHLQ--SYLLADEEFCMQVDSHMDFVEGWDMAMMEEWAATNNEYGVLSTYVQDSRVLGVNVSKKWEVAHLCEVYFSPS-QQPRNQQARAIHEMTEPKLTTTWGAGYSFSKCHAERRVPYDPNLDRIFDGEEFSKMARLWTNGYDVYTPRRGHLVHDYS 319          
BLAST of mRNA_H-elongata_contig63783.13950.1 vs. uniprot
Match: A0A4D9D890_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D890_9STRA)

HSP 1 Score: 291 bits (744), Expect = 2.020e-90
Identity = 143/287 (49.83%), Postives = 184/287 (64.11%), Query Frame = 1
Query:   49 NGWIALVDDDSDHAPPSP---KTESWKRADTTLFVGVSSFRDKRCPQTLVNYFTKARNPERLTVAIVQQNDHEDVDCVAEYCRMRGQKEG---------------PLCPFFDNIKTLRVEAKHAAGPCYGRHLQASSYMLRDEEFCMQTDSHMDVVQDWDAKLLEMWGRVNNEYGVLTTYVHRIEQLKEGMENKKEVPHLCQVSFTDNFDHPRYVQAKLATKLPRPKLTNTWAAGLSVAKCHAWKATPYDPGLRKVFDGEEFSMHARLWTRGYDTYTPDKSLVGHDY 855
            NG     D++ D   P P   KT+SW   DT++ V +SSFRD RCP+TL N FTKA NP+R+   +VQQN+  DVDC+ +YC    ++ G                 CP  D +K LRV+A+ A GP YGR+L   SY++ DEEFCMQ D+HMD    WD +LL+MWG  NNEYGVLTTYV  ++QL   +  + EVP +C+V++T      R  QA     L +PKLT+TWAAG + +KCHA   TPYDP L  +FDGEE+S +ARLWTRGYDTYTP +S+V HDY
Sbjct:   42 NGRWTQFDENDDAGVPQPYPPKTDSWTLNDTSIMVSISSFRDYRCPKTLYNLFTKAANPDRVYAGVVQQNNAGDVDCLNDYCEKIKEERGIGPDASAADPNLRITQNCPHADQVKMLRVQAEDAKGPTYGRYL--GSYLVGDEEFCMQIDAHMDFEDHWDKQLLDMWGLANNEYGVLTTYVPNLDQLHVNLNGRFEVPQVCRVTYTPGEKMVRNEQATNCIWLRKPKLTSTWAAGFAFSKCHADLKTPYDPHLPSLFDGEEYSKYARLWTRGYDTYTPHRSVVYHDY 326          
BLAST of mRNA_H-elongata_contig63783.13950.1 vs. uniprot
Match: A0A7S2XXE5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XXE5_9STRA)

HSP 1 Score: 229 bits (584), Expect = 2.920e-71
Identity = 110/214 (51.40%), Postives = 146/214 (68.22%), Query Frame = 1
Query:   55 WIALVDDDSDHAPPSPKTESWKRADTTLFVGVSSFRDKRCPQTLVNYFTKARNPERLTVAIVQQNDHEDVDCVAEYCRMRG----QKEGPLCPFFDNIKTLRVEAKHAAGPCYGRHLQASSYMLRDE-EFCMQTDSHMDVVQDWDAKLLEMWGRVNNEYGVLTTYVHRIEQLKEGMENKKEVPHLCQVSFTDNFDHPRYVQAKLATKLPRPKLT 681
            W+ L +  +   P  PK++S+ R+DTT++ G++SFRD RCP+TLVN F KA+ PER+ V +VQQN  +DVDC+ EYC   G    +++   CP++  I+ LRV A+ A GP YGRHL   SY+LRDE EFCMQTDSHMD V DWD K+L+MWG + NEYGV+TTYV+R E L + +    EVPHLC + + D    PR  +AK    L +PKLT
Sbjct:   44 WVVLKE--TGPQPHPPKSDSYTRSDTTIWNGIASFRDSRCPRTLVNLFQKAKYPERVYVGLVQQNGDDDVDCLEEYCNRMGSTNRKEDEAKCPYYSQIRILRVHAREARGPTYGRHLM--SYLLRDEDEFCMQTDSHMDYVDDWDVKMLDMWGAIGNEYGVITTYVNRFEDLNKNLNGVNEVPHLCDLVWRDGL--PRNKEAKACRSLKKPKLT 251          
BLAST of mRNA_H-elongata_contig63783.13950.1 vs. uniprot
Match: X6MQK6_RETFI (Uncharacterized protein (Fragment) n=1 Tax=Reticulomyxa filosa TaxID=46433 RepID=X6MQK6_RETFI)

HSP 1 Score: 228 bits (580), Expect = 1.290e-69
Identity = 125/300 (41.67%), Postives = 161/300 (53.67%), Query Frame = 1
Query:   49 NGWIAL--VDDDSDHAPPSPKTESWKRADTTLFVGVSSFRDKRCPQTLVNYFTKARNPERLTVAIVQQNDHEDVDCVA-------------------------EYCRMRGQ----KEGPLCPFFDNIKTLRVEAKHAAGPCYGRHLQASSYMLRDEEFCMQTDSHMDVVQDWDAKLLEMWGRVNNEYGVLTTYVHRIEQLKEGMENKKEVPHLCQVSFTDNFDHPRYVQAKLATKLPRPKLTNTWAAGLSVAKCHAWKATPYDPGLRKVFDGEEFSMHARLWTRGYDTYTPDKSLVGHDY 855
            N WI +  VD      PP P  +SWK  DT ++VG+SS  D RC +TL +  T A+NPER+ + IVQQND E  DC+                          EYC M  +    K+   CP+ +N+KT+R+  + A GP   R LQ    M   EEFCMQ DSH    + WD ++L+ WG  NNE  VLTTY+   E L + +    EVPHLC   F D+F  P   +A  A  L +P L   WA GLS +KCHA     YD  L +++ GEEF   ARLWT GYD YTP K+++ HDY
Sbjct:   13 NTWIEVQYVDLSGPERPP-PNDDSWKSLDTAIYVGISSLMDDRCGRTLHSLLTTAKNPERVHIGIVQQNDKETKDCIEDIQTSKRFANSDQFFLETKCMQKKKEYCAMMKKEAKDKKEEDCPYVNNVKTIRITNEEAKGPNLARGLQL--LMHDGEEFCMQIDSHSFAGKAWDVQMLQDWGACNNELAVLTTYIGSPENLGQNVMGAHEVPHLCTAYFNDDF--PFNDRASAARNLQKPILAPLWAGGLSFSKCHAEWIVKYDVNLLQIWTGEEFGRGARLWTHGYDFYTPTKAIIAHDY 307          
BLAST of mRNA_H-elongata_contig63783.13950.1 vs. uniprot
Match: F0Y7S9_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y7S9_AURAN)

HSP 1 Score: 228 bits (581), Expect = 4.080e-67
Identity = 121/288 (42.01%), Postives = 161/288 (55.90%), Query Frame = 1
Query:   55 WIALVD-DDSDHAPPSPKTESWKRAD---TTLFVGVSSFRDKRCPQTLVNYFTKARNPERLTVAIVQQNDHEDVDCVAEYCRM----RGQKEGPLCPFFDNIKTLRVEAKHAAGPCYGRHLQASSYMLRDEEFCMQTDSHMDVVQDWDAKLLEMWGRVNNEYGVLTTYVHRIEQLKE-----GMENKKEVPHLCQVSFTDNFDHPRYVQAKLATKLPRPKLTNTWAAGLSVAKCHAWKATPYDPGLRKVFDGEEFSMHARLWTRGYDTYTPDKSLVGHDYNKVTNGPA 879
            W+ +VD +D D + P P   +    D   + +FV +++FRD  C  TL   F +A  P+R+ VA+VQQN  ED DC   YC      RG  +   CP+ D+I   R  +  A GP + R  Q +  +  D EFC++TDSHM    DWD K +  W    NEY VL+TYV    Q+ E      + N  EVPHLC + + D   H R +QAK A  L +PKLT  WAAGLS ++CHA +A PYDP    +F GEEFS  AR +T GYD YTP +++V HDY      P+
Sbjct:   32 WVKVVDAEDVDSSAPVPCPPAGAPGDHDASIVFVAIAAFRDSLCATTLEGLFGRAEYPDRVRVAVVQQNKPEDDDCYEAYCAKARASRGLGDDAPCPYGDHISVKRFSSDEAKGPTWAR-AQDADMLPDDAEFCLRTDSHMAFANDWDTKQIAQWYGARNEYAVLSTYVADANQINEDGSEKNINNVWEVPHLCSILWQDG--HVRNMQAKAARLLEKPKLTTLWAAGLSFSRCHAERAVPYDPHTPYIFWGEEFSRTARFFTNGYDIYTPPRTIVAHDYKHTQGDPS 316          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig63783.13950.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KPV9_9PHAE7.180e-18883.96Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZER6_9STRA8.140e-13163.55GlcNAc-domain-containing protein n=1 Tax=Tribonema... [more]
A0A7S3YLX0_HETAK5.640e-9649.66Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A836CB83_9STRA6.450e-9450.37GlcNAc-domain-containing protein n=1 Tax=Tribonema... [more]
D7FQK5_ECTSI3.430e-9351.67[Skp1-protein]-hydroxyproline N-acetylglucosaminyl... [more]
A0A6H5L6U7_9PHAE4.250e-9251.30Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A4D9D890_9STRA2.020e-9049.83Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A7S2XXE5_9STRA2.920e-7151.40Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
X6MQK6_RETFI1.290e-6941.67Uncharacterized protein (Fragment) n=1 Tax=Reticul... [more]
F0Y7S9_AURAN4.080e-6742.01Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig63783contigH-elongata_contig63783:1067..3228 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score535.4
Seed ortholog evalue1.7e-149
Seed eggNOG ortholog2880.D7G1A5
EggNOG free text desc.Glycosyltransferase (GlcNAc)
EggNOG OGs2CXJN@1,2RY14@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons3
Model size885
Cds size885
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig63783.13950.1prot_H-elongata_contig63783.13950.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig63783 1067..3228 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931020.8519745-CDS-H-elongata_contig63783:1066..14681622931020.8519745-CDS-H-elongata_contig63783:1066..1468Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig63783 1067..1468 +
1691679665.3039255-CDS-H-elongata_contig63783:1066..14681691679665.3039255-CDS-H-elongata_contig63783:1066..1468Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig63783 1067..1468 +
1622931020.875556-CDS-H-elongata_contig63783:2172..23701622931020.875556-CDS-H-elongata_contig63783:2172..2370Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig63783 2173..2370 +
1691679665.320147-CDS-H-elongata_contig63783:2172..23701691679665.320147-CDS-H-elongata_contig63783:2172..2370Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig63783 2173..2370 +
1622931020.8954651-CDS-H-elongata_contig63783:2943..32281622931020.8954651-CDS-H-elongata_contig63783:2943..3228Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig63783 2944..3228 +
1691679665.329754-CDS-H-elongata_contig63783:2943..32281691679665.329754-CDS-H-elongata_contig63783:2943..3228Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig63783 2944..3228 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig63783.13950.1

>prot_H-elongata_contig63783.13950.1 ID=prot_H-elongata_contig63783.13950.1|Name=mRNA_H-elongata_contig63783.13950.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=295bp
MVDAKVTPNGGMVWDGNGWIALVDDDSDHAPPSPKTESWKRADTTLFVGV
SSFRDKRCPQTLVNYFTKARNPERLTVAIVQQNDHEDVDCVAEYCRMRGQ
KEGPLCPFFDNIKTLRVEAKHAAGPCYGRHLQASSYMLRDEEFCMQTDSH
MDVVQDWDAKLLEMWGRVNNEYGVLTTYVHRIEQLKEGMENKKEVPHLCQ
VSFTDNFDHPRYVQAKLATKLPRPKLTNTWAAGLSVAKCHAWKATPYDPG
LRKVFDGEEFSMHARLWTRGYDTYTPDKSLVGHDYNKVTNGPAPS
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mRNA from alignment at H-elongata_contig63783:1067..3228+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig63783.13950.1 ID=mRNA_H-elongata_contig63783.13950.1|Name=mRNA_H-elongata_contig63783.13950.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2162bp|location=Sequence derived from alignment at H-elongata_contig63783:1067..3228+ (Himanthalia elongata Himel1 dioecious)
ATGGTCGACGCGAAGGTGACGCCGAACGGAGGCATGGTTTGGGACGGGAA TGGATGGATCGCGCTGGTGGACGACGACTCCGACCACGCGCCCCCGTCAC CGAAGACGGAGTCCTGGAAGCGGGCGGACACGACCCTCTTCGTCGGTGTG TCGTCGTTCCGGGACAAGCGTTGCCCCCAGACGCTCGTGAACTACTTCAC CAAGGCTAGGAACCCCGAGCGGCTAACGGTCGCCATTGTGCAGCAGAATG ATCACGAAGACGTGGACTGCGTTGCGGAGTACTGCAGGATGAGGGGGCAA AAGGAAGGCCCGCTCTGCCCCTTCTTCGACAACATCAAGACGCTGAGGGT AGAGGCAAAGCACGCCGCGGGACCTTGCTACGGTCGCCACTTGCAGGCAA GTGTCGTGCCGCCTGCGCAATCGATCGAAGCTCTAAATCGATTCGGGGAT TGAGAAGTAGAGCAAAATATATAAATCTCATTCGAACTTGACGATAGTTA GTTCCCTGGACTTACCTCTCATATGGTGAAGAAGTTGTAAATGTTTGGAG GGTTTGGAGGAGAGTTCACATGTTTTGTTTTTTTTTAATGGAGGAGAGTC TTGGATGGGTCAAATGTGTTGTGTGAAGGGCCTAAGACGGGAACATAAGA TTGGTGCTTGTAAAATGATGTGATGTTTCGTGTCGCGCTGCGAATGATTG TTGCGTCGACGTGAAAAACTGAGGCGAAAAAATGATCATCAAGGTCGAGG GGTGACGCTGCATGTTAGGATTGTTTTGGGGGGGTCAAGGTCCTCAGGGC CGTGGTATCTCTGCGCCGGGATTATTGCCTTACGACGGAGGTCTACAATT TAACCAACATGAGGAAAATGCTGTCTTCGCGATGTTGGTGTCGCCAAGGA GTTCGCAATCACGGCTGCCCACCGTCCCGAATTTTCCGCCGTGGCCCCTC GCTCGCGCGCAGATACCAACCTTTACCCATCCCTGCCAGGCTTGAAGTTG GTCCGCCGAGTTGTGCCTAATCCCGCCCGCCCTCTGCGTGTTGTTCGGTC GCGTTTTGCCGTATGCACTCTCTCGATACTTCCGTGCATCTGGCATCGTT ATTCAGTCGTACATGCTTCGGGATGAGGAGTTTTGCATGCAGACGGACAG CCACATGGACGTGGTGCAGGACTGGGACGCCAAGCTGCTGGAGATGTGGG GCCGCGTCAACAACGAGTACGGCGTCTTGACGACATACGTGCACAGGATC GAGCAGCTGAAAGAAGGCATGGAGAACAAGAAGGAGGTGCCTCACCTTTG CCAGGTGAATATATATATATATATATATATATACATATAACGTTCGTGGC TCGATTCTAGCAAAAAGAAGCTTGTTCAGTGGTTCGCCGCATATCCTGAT ATTTGTATCGTGCGTATACACACCTTGAGTATGCCTCCACTCCGCGCATC AGAAAATGGAGTGTAGGTGTAGCTGACGGTGATATCCCCCGTCCCTCGAC ATCGCTTCATTTCCCTCGACAGCGTTGCGGGGCATGTTATTGTTGTTGTT GGTCTCACATTCAGCAGACAATCAACCGGATTTGGTTGCCTTCTGCTCGT GGTCAGTTGAACAGGGAAAATAAATTTCCCCTGTGATACTCTCCGTTCCG TTCCCTCTGGAATCGATCGACGACCAGCATAGCATTACCTATTATTTAGT CAATCTAGACCATCCACTCTTTTCCATCTCTCCGTCTGGCCACCCTTCCT ATGATAAATGAAACACCCCGTCCTTCCACACAGCTATCTCTTCACACCTT TGTTCTCCGTCATACCCCACCCCCCCCCCCCCCCCTGTTGTTTTCACAAC ACCCGGCAACGAAAAAATATACTGAAGGTGTCTTTCACGGACAACTTCGA CCACCCTAGGTACGTGCAGGCAAAGCTGGCGACAAAGCTTCCGAGACCGA AGCTGACCAACACGTGGGCGGCGGGGCTAAGCGTTGCCAAGTGCCACGCA TGGAAGGCGACCCCGTACGACCCTGGCCTGCGTAAGGTGTTTGACGGGGA GGAGTTCTCGATGCACGCACGACTGTGGACCAGGGGCTACGACACGTACA CCCCGGACAAAAGCCTGGTTGGACACGACTATAACAAGGTCACCAACGGC CCGGCTCCGTCG
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Coding sequence (CDS) from alignment at H-elongata_contig63783:1067..3228+

>mRNA_H-elongata_contig63783.13950.1 ID=mRNA_H-elongata_contig63783.13950.1|Name=mRNA_H-elongata_contig63783.13950.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1770bp|location=Sequence derived from alignment at H-elongata_contig63783:1067..3228+ (Himanthalia elongata Himel1 dioecious)
ATGGTCGACGCGAAGGTGACGCCGAACGGAGGCATGGTTTGGGACGGGAA
TGGATGGATCGCGCTGGTGGACGACGACTCCGACCACGCGCCCCCGTCAC
CGAAGACGGAGTCCTGGAAGCGGGCGGACACGACCCTCTTCGTCGGTGTG
TCGTCGTTCCGGGACAAGCGTTGCCCCCAGACGCTCGTGAACTACTTCAC
CAAGGCTAGGAACCCCGAGCGGCTAACGGTCGCCATTGTGCAGCAGAATG
ATCACGAAGACGTGGACTGCGTTGCGGAGTACTGCAGGATGAGGGGGCAA
AAGGAAGGCCCGCTCTGCCCCTTCTTCGACAACATCAAGACGCTGAGGGT
AGAGGCAAAGCACGCCGCGGGACCTTGCTACGGTCGCCACTTGCAGGCAA
GTATGGTCGACGCGAAGGTGACGCCGAACGGAGGCATGGTTTGGGACGGG
AATGGATGGATCGCGCTGGTGGACGACGACTCCGACCACGCGCCCCCGTC
ACCGAAGACGGAGTCCTGGAAGCGGGCGGACACGACCCTCTTCGTCGGTG
TGTCGTCGTTCCGGGACAAGCGTTGCCCCCAGACGCTCGTGAACTACTTC
ACCAAGGCTAGGAACCCCGAGCGGCTAACGGTCGCCATTGTGCAGCAGAA
TGATCACGAAGACGTGGACTGCGTTGCGGAGTACTGCAGGATGAGGGGGC
AAAAGGAAGGCCCGCTCTGCCCCTTCTTCGACAACATCAAGACGCTGAGG
GTAGAGGCAAAGCACGCCGCGGGACCTTGCTACGGTCGCCACTTGCAGGC
AAGTTCGTACATGCTTCGGGATGAGGAGTTTTGCATGCAGACGGACAGCC
ACATGGACGTGGTGCAGGACTGGGACGCCAAGCTGCTGGAGATGTGGGGC
CGCGTCAACAACGAGTACGGCGTCTTGACGACATACGTGCACAGGATCGA
GCAGCTGAAAGAAGGCATGGAGAACAAGAAGGAGGTGCCTCACCTTTGCC
AGTCGTACATGCTTCGGGATGAGGAGTTTTGCATGCAGACGGACAGCCAC
ATGGACGTGGTGCAGGACTGGGACGCCAAGCTGCTGGAGATGTGGGGCCG
CGTCAACAACGAGTACGGCGTCTTGACGACATACGTGCACAGGATCGAGC
AGCTGAAAGAAGGCATGGAGAACAAGAAGGAGGTGCCTCACCTTTGCCAG
GTGTCTTTCACGGACAACTTCGACCACCCTAGGTACGTGCAGGCAAAGCT
GGCGACAAAGCTTCCGAGACCGAAGCTGACCAACACGTGGGCGGCGGGGC
TAAGCGTTGCCAAGTGCCACGCATGGAAGGCGACCCCGTACGACCCTGGC
CTGCGTAAGGTGTTTGACGGGGAGGAGTTCTCGATGCACGCACGACTGTG
GACCAGGGGCTACGACACGTACACCCCGGACAAAAGCCTGGTTGGACACG
ACTATAACAAGGTCACCAACGGCCCGGCTCCGTCGGTGTCTTTCACGGAC
AACTTCGACCACCCTAGGTACGTGCAGGCAAAGCTGGCGACAAAGCTTCC
GAGACCGAAGCTGACCAACACGTGGGCGGCGGGGCTAAGCGTTGCCAAGT
GCCACGCATGGAAGGCGACCCCGTACGACCCTGGCCTGCGTAAGGTGTTT
GACGGGGAGGAGTTCTCGATGCACGCACGACTGTGGACCAGGGGCTACGA
CACGTACACCCCGGACAAAAGCCTGGTTGGACACGACTATAACAAGGTCA
CCAACGGCCCGGCTCCGTCG
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