mRNA_H-elongata_contig63260.13900.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig63260.13900.1 vs. uniprot
Match: K7ZUA3_ASCNO (Vanadium-dependent bromoperoxidase 2 n=1 Tax=Ascophyllum nodosum TaxID=52969 RepID=K7ZUA3_ASCNO) HSP 1 Score: 323 bits (827), Expect = 5.200e-104 Identity = 162/217 (74.65%), Postives = 179/217 (82.49%), Query Frame = 1
Query: 1 GGIESVFLLPMAVPEGSPAHPAYPSGHAVNLGAYITVLKAFLGFERGQRCFPSPKVSNDAGTDRIDYQSSPTDRLGVCVNNNGDDEAGLTYEGELNKVAANVILGRSHLGVHYRMDGVFGAEMGEAGAIRRLQQELGGLPEARDSDEGSIPQASYKFRLYSGKMIELFPSNLYKLEDQMCKGLFTGDDFCVPESQEDDVS-EILDVEAVEDQAFAEL 648
GG VFLLPMAV EGSP HPAYPSGHA+NLGAY+TVLKAFLGFE GQRCFPSP +SNDAGTDRI + S DR+G C+N +G++E GLTYEGELNKV +NV +GRSHLGVH+RMDGVFGAEMGEAGAIRRLQQELGGLPEARD+ EG IP ASYKFRLYSG MIELFP N Y L DQMCKG FTGDDFCVP +E+ E L + +V DQ AEL
Sbjct: 426 GGTNQVFLLPMAVGEGSPVHPAYPSGHAINLGAYLTVLKAFLGFELGQRCFPSPMISNDAGTDRIPFVPSDGDRVGTCINEDGEEEVGLTYEGELNKVTSNVAIGRSHLGVHWRMDGVFGAEMGEAGAIRRLQQELGGLPEARDT-EGPIPPASYKFRLYSGTMIELFPDNRYMLGDQMCKGFFTGDDFCVPADEEETAELEDLVLGSVVDQTCAEL 641
BLAST of mRNA_H-elongata_contig63260.13900.1 vs. uniprot
Match: Q7X9V0_9PHAE (Vanadium-dependent bromoperoxidase 2 n=2 Tax=Laminaria digitata TaxID=80365 RepID=Q7X9V0_9PHAE) HSP 1 Score: 268 bits (685), Expect = 1.880e-82 Identity = 135/213 (63.38%), Postives = 162/213 (76.06%), Query Frame = 1
Query: 10 ESVFLLPMAVPEGSPAHPAYPSGHAVNLGAYITVLKAFLGFERGQRCFPSPKVSNDAGTDRIDYQSSPTDRLGVCVNNNGDDEAGLTYEGELNKVAANVILGRSHLGVHYRMDGVFGAEMGEAGAIRRLQQELGGLPEARDSD----EGSIPQASYKFRLYSGKMIELFPSNLYKLEDQMCKGLFTGDDFCVPESQEDDVSEILDVEAVEDQA 636
E FLLPMA +GSP HPAYPSGHA+N GAYIT LKAFLG+E GQ+CFP+P VSND GT RI Y+ S + +G CVN G GLTYEGELNK++ANV+LGRSH+GVH+RMDGV+GA MGE +RRLQQEL GLPEAR+ + G IP A+YKFRLYSGK++EL+ NLYKL+ ++C+G FTGDDFC P EDD S D+ VE+ A
Sbjct: 463 EKTFLLPMAAAQGSPTHPAYPSGHAINNGAYITALKAFLGYEAGQKCFPNPVVSNDEGTKRIKYKPSGREIVGECVNEKGKLVEGLTYEGELNKISANVLLGRSHIGVHWRMDGVYGALMGETSCVRRLQQELPGLPEAREVEGKKRRGDIPPATYKFRLYSGKILELYGRNLYKLDGKLCEGAFTGDDFCDP-IDEDDYSSFDDI--VEEHA 672
BLAST of mRNA_H-elongata_contig63260.13900.1 vs. uniprot
Match: A0A3G3BM34_SACJA (Vanadium-dependent bromine peroxidase n=1 Tax=Saccharina japonica TaxID=88149 RepID=A0A3G3BM34_SACJA) HSP 1 Score: 265 bits (677), Expect = 2.630e-81 Identity = 136/215 (63.26%), Postives = 163/215 (75.81%), Query Frame = 1
Query: 1 GGIESVFLLPMAVPEGSPAHPAYPSGHAVNLGAYITVLKAFLGFERGQRCFPSPKVSNDAGTDRIDYQSSPTDRLGVCVNNNGDDEAGLTYEGELNKVAANVILGRSHLGVHYRMDGVFGAEMGEAGAIRRLQQELGGLPEARDSDE---GSIPQASYKFRLYSGKMIELFPSNLYKLEDQMCKGLFTGDDFCVPESQEDDVSEILDVEAVEDQA 636
G E FLLPMA +GSP HPAYPSGHA+N+GAYIT LKAFLGFE GQRCFP P VSN+ GT+RI Y S + +G C+N+ G GLTYEGELNKV+ANV++GRSHLGVH+RMDGV+GA +GE A+RRLQQEL GL EAR +D+ IP A+Y FRLYSGKM+EL+ +NLYKL+ ++C+G FTGDDFC E QEDD + VED A
Sbjct: 459 GDGEKTFLLPMASAQGSPTHPAYPSGHAINVGAYITSLKAFLGFEAGQRCFPDPVVSNNEGTERIPYVPSGREIVGECINDKGKKVDGLTYEGELNKVSANVLIGRSHLGVHWRMDGVYGALVGEVSAVRRLQQELPGLAEARPNDDLKRKEIPPATYNFRLYSGKMLELYGANLYKLDGKLCEGAFTGDDFC-DEVQEDDYESFEHI--VEDLA 670
BLAST of mRNA_H-elongata_contig63260.13900.1 vs. uniprot
Match: A0A411NJW8_SACJA (Vanadium-dependent bromoperoxidase (Fragment) n=3 Tax=Saccharina japonica TaxID=88149 RepID=A0A411NJW8_SACJA) HSP 1 Score: 265 bits (677), Expect = 3.310e-81 Identity = 136/215 (63.26%), Postives = 163/215 (75.81%), Query Frame = 1
Query: 1 GGIESVFLLPMAVPEGSPAHPAYPSGHAVNLGAYITVLKAFLGFERGQRCFPSPKVSNDAGTDRIDYQSSPTDRLGVCVNNNGDDEAGLTYEGELNKVAANVILGRSHLGVHYRMDGVFGAEMGEAGAIRRLQQELGGLPEARDSDE---GSIPQASYKFRLYSGKMIELFPSNLYKLEDQMCKGLFTGDDFCVPESQEDDVSEILDVEAVEDQA 636
G E FLLPMA +GSP HPAYPSGHA+N+GAYIT LKAFLGFE GQRCFP P VSN+ GT+RI Y S + +G C+N+ G GLTYEGELNKV+ANV++GRSHLGVH+RMDGV+GA +GE A+RRLQQEL GL EAR +D+ IP A+Y FRLYSGKM+EL+ +NLYKL+ ++C+G FTGDDFC E QEDD + VED A
Sbjct: 470 GDGEKTFLLPMASAQGSPTHPAYPSGHAINVGAYITSLKAFLGFEAGQRCFPDPVVSNNEGTERIPYVPSGREIVGECINDKGKKVDGLTYEGELNKVSANVLIGRSHLGVHWRMDGVYGALVGEVSAVRRLQQELPGLAEARPNDDLKRKEIPPATYNFRLYSGKMLELYGANLYKLDGKLCEGAFTGDDFC-DEVQEDDYESFEHI--VEDLA 681
BLAST of mRNA_H-elongata_contig63260.13900.1 vs. uniprot
Match: B7ZGM5_9PHAE (Putative vanadium-dependent bromoperoxidase 7 (Fragment) n=1 Tax=Laminaria digitata TaxID=80365 RepID=B7ZGM5_9PHAE) HSP 1 Score: 252 bits (643), Expect = 7.010e-79 Identity = 122/190 (64.21%), Postives = 147/190 (77.37%), Query Frame = 1
Query: 10 ESVFLLPMAVPEGSPAHPAYPSGHAVNLGAYITVLKAFLGFERGQRCFPSPKVSNDAGTDRIDYQSSPTDRLGVCVNNNGDDEAGLTYEGELNKVAANVILGRSHLGVHYRMDGVFGAEMGEAGAIRRLQQELGGLPEARDSD---EGSIPQASYKFRLYSGKMIELFPSNLYKLEDQMCKGLFTGDDFC 570
E FLLPMA +GSP HPAYPSGHA+NLG YIT LKAF+GFE GQ+CFP+P S+D G R+ Y + T+ L CV+ +G+ GLT EGELNKVA+NVI+GRSHLGVH+RMDGV+GA MGE A+RRLQQEL GLPEAR D IP A+YKFRLYSGKM+E+F L++L+ Q+CKG +TGDDFC
Sbjct: 212 EKTFLLPMATAQGSPNHPAYPSGHAINLGGYITTLKAFVGFEAGQKCFPNPVESDDGGLARVPYVPTGTEFLEDCVDKDGNKTTGLTIEGELNKVASNVIIGRSHLGVHWRMDGVYGALMGETSAVRRLQQELSGLPEARVVDGARSDDIPPATYKFRLYSGKMLEIFSVTLFRLDGQLCKGAYTGDDFC 401
BLAST of mRNA_H-elongata_contig63260.13900.1 vs. uniprot
Match: D8LTP5_ECTSI (Vanadium-dependent bromoperoxidase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTP5_ECTSI) HSP 1 Score: 250 bits (638), Expect = 7.180e-76 Identity = 125/188 (66.49%), Postives = 149/188 (79.26%), Query Frame = 1
Query: 10 ESVFLLPMAVPEGSPAHPAYPSGHAVNLGAYITVLKAFLGFERGQRCFPSPKV-SNDAGTDRIDYQSSPTDRLGVCVNNNGDDEAGLTYEGELNKVAANVILGRSHLGVHYRMDGVFGAEMGEAGAIRRLQQELGGLPEARDSDEGSIPQASYKFRLYSGKMIELFPSNLYKLEDQMCKGLFTGDDFC 570
+ +LLPMAV EGSP HPAYPSGHA+NLGAYIT LKAFLGFE GQRC+ V SND GT RI+Y + C++ NG + GLTYEGELNKVA+NVI+GRSH+GVHYRMDGV+GA MGE A+RRLQQEL L EARD+ +GSIP ASYKFRLYSGK++EL +++KL+ + CKGL+TGDDFC
Sbjct: 433 DGTYLLPMAVAEGSPVHPAYPSGHAINLGAYITTLKAFLGFELGQRCYLGDLVVSNDEGTKRIEYVPRKGE---TCIDQNGREVQGLTYEGELNKVASNVIIGRSHIGVHYRMDGVYGALMGETSAVRRLQQELPNLSEARDT-KGSIPPASYKFRLYSGKVLELLAKDIFKLDGRTCKGLYTGDDFC 616
BLAST of mRNA_H-elongata_contig63260.13900.1 vs. uniprot
Match: B7ZGM1_9PHAE (Putative vanadium-dependent bromoperoxidase 3 n=4 Tax=Laminaria digitata TaxID=80365 RepID=B7ZGM1_9PHAE) HSP 1 Score: 247 bits (631), Expect = 8.250e-75 Identity = 122/190 (64.21%), Postives = 145/190 (76.32%), Query Frame = 1
Query: 10 ESVFLLPMAVPEGSPAHPAYPSGHAVNLGAYITVLKAFLGFERGQRCFPSPKVSNDAGTDRIDYQSSPTDRLGVCVNNNGDDEAGLTYEGELNKVAANVILGRSHLGVHYRMDGVFGAEMGEAGAIRRLQQELGGLPEARDSD---EGSIPQASYKFRLYSGKMIELFPSNLYKLEDQMCKGLFTGDDFC 570
E FLLPMA +GSP HPAYPSGHA+NLG YIT LKAF+GFE GQ+CFP+ S+D G R+ Y + T+ L CV+ +G+ GLT EGELNKVA+NVI+GRSHLGVH+RMDGV GA MGE A+RRLQQEL GLPEAR D IP A+YKFRLYSGKM+E+F LY+L+ Q+CKG +TGDDFC
Sbjct: 429 EKTFLLPMATAQGSPNHPAYPSGHAINLGGYITTLKAFVGFEAGQKCFPNLVESDDGGLARVPYVPTGTEFLEDCVDKDGNKTTGLTIEGELNKVASNVIIGRSHLGVHWRMDGVSGALMGETSAVRRLQQELSGLPEARVVDGARSDDIPPATYKFRLYSGKMLEIFGVTLYRLDGQLCKGAYTGDDFC 618
BLAST of mRNA_H-elongata_contig63260.13900.1 vs. uniprot
Match: Q4LDE6_9PHAE (Vanadium-dependent iodoperoxidase 1 n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q4LDE6_9PHAE) HSP 1 Score: 144 bits (362), Expect = 4.050e-36 Identity = 83/192 (43.23%), Postives = 106/192 (55.21%), Query Frame = 1
Query: 1 GGIESVFLLPMAVPEGSPAHPAYPSGHAVNLGAYITVLKAFLGFERGQRCFPSPKVSNDAGTDRIDYQSSPTDRLGVCVNNNGDDEAG-LTYEGELNKVAANVILGRSHLGVHYRMDGVFGAEMGEAGAIRRLQQELGGLPEARDSDEGSIPQASYKFRLYSGKMIELFPSNLYKLEDQMCKG-LFTGDDFC 570
G ++ +LL A+PEGSP HP+YP+GHA GA+ TVLKA +G ERG CF P +D G + Y GDD LT+EGE+NK+A NV LGR+ LGVH+R+D G +GE A+R LQQE PE A Y+FRL SGK I L + ++D +C G F G D C
Sbjct: 457 GVLDRTYLLSQALPEGSPTHPSYPAGHATQNGAFATVLKALVGLERGSVCFNDPVFPDDEGLTLLPYT--------------GDDGNNCLTFEGEINKLAVNVALGRNMLGVHWRIDSELGLLLGETAAVRILQQEAVAYPE----------NAGYEFRLMSGKTIRLETDGTFFIDDTLCSGDAFMGADLC 624
BLAST of mRNA_H-elongata_contig63260.13900.1 vs. uniprot
Match: A0A3G3BM28_SACJA (Vanadium-dependent iodine peroxidase n=1 Tax=Saccharina japonica TaxID=88149 RepID=A0A3G3BM28_SACJA) HSP 1 Score: 131 bits (330), Expect = 1.230e-31 Identity = 75/162 (46.30%), Postives = 92/162 (56.79%), Query Frame = 1
Query: 4 GIESVFLLPMAVPEGSPAHPAYPSGHAVNLGAYITVLKAFLGFERGQRCFPSPKVSNDAGTDRIDYQSSPTDRLGVCVNNNGDDEAGLTYEGELNKVAANVILGRSHLGVHYRMDGVFGAEMGEAGAIRRLQQELGGLPEARDSDEGSIPQASYKFRLYSGK 489
GI S FLLP V EGSP HP+YPSGHAV GA+ T+LKA +G ERG CF P V +D G + + C LT+EGE+NK AANV LGR+ +GVH+RMD G +GE A+R L QEL G PE Y+FR+ SG+
Sbjct: 440 GIPSTFLLPQTVREGSPTHPSYPSGHAVQNGAFSTILKALVGLERGLECFNDPVVPSDDGLTLLPFDG--------C----------LTFEGEINKYAANVALGRNWMGVHWRMDAQEGLLLGETVAVRILMQELAGFPELEP----------YEFRVMSGE 573
BLAST of mRNA_H-elongata_contig63260.13900.1 vs. uniprot
Match: UPI00054CF2F9 (phosphatase PAP2 family protein n=1 Tax=Ectobacillus panaciterrae TaxID=363872 RepID=UPI00054CF2F9) HSP 1 Score: 103 bits (256), Expect = 8.790e-22 Identity = 59/127 (46.46%), Postives = 72/127 (56.69%), Query Frame = 1
Query: 19 FLLPMAVPEGSPAHPAYPSGHAVNLGAYITVLKAFLGFERGQRCFPSPKVSNDAGTDRIDYQSSPTDRLGVCVNNNGDDEAGLTYEGELNKVAANVILGRSHLGVHYRMDGVFGAEMGEAGAIRRLQ 399
+LLPMA PEG P HPAYP+GHA GA +TVLKAF P+P V+N G + Y SP LT GELNK+AAN+ +GR GVH+R DG+ G ++GEA AI LQ
Sbjct: 381 YLLPMAYPEGCPTHPAYPAGHACIAGAGVTVLKAFFN---ESFVIPNPVVANSDGRSLLSYSGSP-----------------LTIGGELNKLAANIAIGRDTAGVHWRSDGIEGLKLGEAVAIGILQ 487 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig63260.13900.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig63260.13900.1 >prot_H-elongata_contig63260.13900.1 ID=prot_H-elongata_contig63260.13900.1|Name=mRNA_H-elongata_contig63260.13900.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=207bp MAVPEGSPAHPAYPSGHAVNLGAYITVLKAFLGFERGQRCFPSPKVSNDAback to top mRNA from alignment at H-elongata_contig63260:1298..3159+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig63260.13900.1 ID=mRNA_H-elongata_contig63260.13900.1|Name=mRNA_H-elongata_contig63260.13900.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1862bp|location=Sequence derived from alignment at H-elongata_contig63260:1298..3159+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig63260:1298..3159+ >mRNA_H-elongata_contig63260.13900.1 ID=mRNA_H-elongata_contig63260.13900.1|Name=mRNA_H-elongata_contig63260.13900.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1242bp|location=Sequence derived from alignment at H-elongata_contig63260:1298..3159+ (Himanthalia elongata Himel1 dioecious)back to top |